HEADER PROTEIN TRANSPORT 05-DEC-25 21AW TITLE CRYSTAL STRUCTURE OF NICOTIANA BENTHAMIANA IMPORTIN ALPHA-CUCUMBER TITLE 2 MOSAIC VIRUS (STRAIN FNY) SUPPRESSOR OF SILENCING 2B NLS PEPTIDE TITLE 3 COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: SUPPRESSOR OF SILENCING 2B; COMPND 3 CHAIN: C, E, D, F; COMPND 4 SYNONYM: PROTEIN 2B; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: IMPORTIN SUBUNIT ALPHA; COMPND 8 CHAIN: A, B; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CUCUMBER MOSAIC VIRUS (STRAIN FNY); SOURCE 3 ORGANISM_TAXID: 12307; SOURCE 4 GENE: ORF2B; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: NICOTIANA BENTHAMIANA; SOURCE 9 ORGANISM_TAXID: 4100; SOURCE 10 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 11 EXPRESSION_SYSTEM_TAXID: 866768 KEYWDS NICOTIANA BENTHAMIANA IMPORTIN ALPHA, CUCUMBER MOSAIC VIRUS (STRAIN KEYWDS 2 FNY) SUPPRESSOR OF SILENCING 2B, PROTEIN TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR Y.LIU,Z.CHEN REVDAT 1 08-JUL-26 21AW 0 JRNL AUTH Y.LIU,Z.CHEN JRNL TITL CRYSTAL STRUCTURE OF NBIMPORTIN-ALPHA1 AND STRUCTURAL BASIS JRNL TITL 2 OF ITS INTERACTION WITH PLANT VIRUS NUCLEAR LOCALIZATION JRNL TITL 3 SIGNALS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 98.57 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 60824 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3241 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4267 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.49 REMARK 3 BIN R VALUE (WORKING SET) : 0.2440 REMARK 3 BIN FREE R VALUE SET COUNT : 222 REMARK 3 BIN FREE R VALUE : 0.2570 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6694 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 358 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.79 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.58000 REMARK 3 B22 (A**2) : -4.86000 REMARK 3 B33 (A**2) : 2.27000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.53000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.177 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.155 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.125 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.612 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.942 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6816 ; 0.006 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 6569 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9274 ; 1.076 ; 1.964 REMARK 3 BOND ANGLES OTHERS (DEGREES): 15111 ; 0.797 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 863 ; 4.951 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 296 ;35.968 ;25.338 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1163 ;15.541 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 34 ;15.707 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1091 ; 0.066 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7727 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1463 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3470 ; 1.486 ; 3.372 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3469 ; 1.486 ; 3.370 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4327 ; 2.443 ; 5.039 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 4328 ; 2.442 ; 5.041 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3346 ; 1.738 ; 3.645 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 3347 ; 1.738 ; 3.646 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 4947 ; 2.860 ; 5.369 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 8333 ; 5.371 ;27.554 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 8214 ; 5.249 ;27.337 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 21AW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBC ON 15-DEC-25. REMARK 100 THE DEPOSITION ID IS D_1300066917. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-JAN-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 64065 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 98.570 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : 0.05600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 29.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.05600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: BALBES REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.84 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M LITHIUM CITRATE, 35% GLYCEROL REMARK 280 ETHOXYLATE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 38.76600 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, E, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, F, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG C 27 REMARK 465 SER C 28 REMARK 465 HIS C 29 REMARK 465 LYS C 30 REMARK 465 GLN C 31 REMARK 465 ASN C 32 REMARK 465 ARG C 33 REMARK 465 ARG C 34 REMARK 465 GLU C 35 REMARK 465 ARG C 36 REMARK 465 GLY C 37 REMARK 465 ALA E 21 REMARK 465 LYS E 22 REMARK 465 LYS E 23 REMARK 465 GLN E 24 REMARK 465 ARG E 25 REMARK 465 ARG E 26 REMARK 465 ARG E 27 REMARK 465 SER E 28 REMARK 465 HIS E 29 REMARK 465 LYS E 30 REMARK 465 GLN E 31 REMARK 465 GLY E 37 REMARK 465 GLU A 499 REMARK 465 ASP A 500 REMARK 465 ASP A 501 REMARK 465 GLU A 502 REMARK 465 GLN A 503 REMARK 465 LEU A 504 REMARK 465 PRO A 505 REMARK 465 SER A 506 REMARK 465 ALA A 507 REMARK 465 ASP A 508 REMARK 465 ALA A 509 REMARK 465 GLN A 510 REMARK 465 HIS A 511 REMARK 465 SER A 512 REMARK 465 GLY A 513 REMARK 465 PHE A 514 REMARK 465 ASN A 515 REMARK 465 PHE A 516 REMARK 465 GLY A 517 REMARK 465 GLY A 518 REMARK 465 GLY A 519 REMARK 465 GLU A 520 REMARK 465 LEU A 521 REMARK 465 PRO A 522 REMARK 465 LEU A 523 REMARK 465 PRO A 524 REMARK 465 SER A 525 REMARK 465 GLY A 526 REMARK 465 GLY A 527 REMARK 465 PHE A 528 REMARK 465 ASN A 529 REMARK 465 PHE A 530 REMARK 465 SER A 531 REMARK 465 SER A 532 REMARK 465 ARG D 27 REMARK 465 SER D 28 REMARK 465 HIS D 29 REMARK 465 LYS D 30 REMARK 465 GLN D 31 REMARK 465 ASN D 32 REMARK 465 ARG D 33 REMARK 465 ARG D 34 REMARK 465 GLU D 35 REMARK 465 ARG D 36 REMARK 465 GLY D 37 REMARK 465 ALA F 21 REMARK 465 LYS F 22 REMARK 465 LYS F 23 REMARK 465 GLN F 24 REMARK 465 ARG F 25 REMARK 465 ARG F 26 REMARK 465 ARG F 27 REMARK 465 SER F 28 REMARK 465 HIS F 29 REMARK 465 LYS F 30 REMARK 465 GLN F 31 REMARK 465 ASN F 32 REMARK 465 ARG F 33 REMARK 465 ARG F 36 REMARK 465 GLY F 37 REMARK 465 GLU B 499 REMARK 465 ASP B 500 REMARK 465 ASP B 501 REMARK 465 GLU B 502 REMARK 465 GLN B 503 REMARK 465 LEU B 504 REMARK 465 PRO B 505 REMARK 465 SER B 506 REMARK 465 ALA B 507 REMARK 465 ASP B 508 REMARK 465 ALA B 509 REMARK 465 GLN B 510 REMARK 465 HIS B 511 REMARK 465 SER B 512 REMARK 465 GLY B 513 REMARK 465 PHE B 514 REMARK 465 ASN B 515 REMARK 465 PHE B 516 REMARK 465 GLY B 517 REMARK 465 GLY B 518 REMARK 465 GLY B 519 REMARK 465 GLU B 520 REMARK 465 LEU B 521 REMARK 465 PRO B 522 REMARK 465 LEU B 523 REMARK 465 PRO B 524 REMARK 465 SER B 525 REMARK 465 GLY B 526 REMARK 465 GLY B 527 REMARK 465 PHE B 528 REMARK 465 ASN B 529 REMARK 465 PHE B 530 REMARK 465 SER B 531 REMARK 465 SER B 532 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN E 32 CG OD1 ND2 REMARK 470 GLU A 105 CG CD OE1 OE2 REMARK 470 GLN A 115 OE1 NE2 REMARK 470 ILE A 319 CD1 REMARK 470 LYS A 342 CG CD CE NZ REMARK 470 LYS A 343 CG CD CE NZ REMARK 470 GLU A 384 OE1 OE2 REMARK 470 LYS A 417 CE NZ REMARK 470 VAL A 424 CG2 REMARK 470 ARG A 429 CG CD NE CZ NH1 NH2 REMARK 470 THR A 482 CG2 REMARK 470 GLU A 486 OE1 OE2 REMARK 470 GLU A 498 CG CD OE1 OE2 REMARK 470 GLN B 97 CG CD OE1 NE2 REMARK 470 GLU B 105 CG CD OE1 OE2 REMARK 470 GLN B 133 CG CD OE1 NE2 REMARK 470 GLU B 151 CG CD OE1 OE2 REMARK 470 LYS B 216 CG CD CE NZ REMARK 470 LYS B 342 CG CD CE NZ REMARK 470 GLU B 386 OE1 OE2 REMARK 470 ILE B 387 CD1 REMARK 470 LYS B 417 CE NZ REMARK 470 VAL B 424 CG2 REMARK 470 ARG B 429 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 443 CG CD CE NZ REMARK 470 GLN B 462 OE1 NE2 REMARK 470 THR B 482 CG2 REMARK 470 GLU B 483 CD OE1 OE2 REMARK 470 GLU B 486 OE1 OE2 REMARK 470 GLU B 498 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 LYS A 234 C PRO A 235 N 0.146 REMARK 500 LEU A 246 C PRO A 247 N 0.155 REMARK 500 PRO B 235 N PRO B 235 CA 0.203 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG E 33 CG - CD - NE ANGL. DEV. = -21.4 DEGREES REMARK 500 ARG E 33 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 ARG E 33 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 PRO A 247 C - N - CA ANGL. DEV. = 9.2 DEGREES REMARK 500 PRO B 235 CA - N - CD ANGL. DEV. = -10.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 327 33.28 -96.42 REMARK 500 HIS B 327 34.46 -97.25 REMARK 500 REMARK 500 REMARK: NULL DBREF 21AW C 21 37 UNP P0C783 2B_CMVFN 21 37 DBREF 21AW E 21 37 UNP P0C783 2B_CMVFN 21 37 DBREF 21AW A 74 532 UNP A1YUL8 A1YUL8_NICBE 74 532 DBREF 21AW D 21 37 UNP P0C783 2B_CMVFN 21 37 DBREF 21AW F 21 37 UNP P0C783 2B_CMVFN 21 37 DBREF 21AW B 74 532 UNP A1YUL8 A1YUL8_NICBE 74 532 SEQRES 1 C 17 ALA LYS LYS GLN ARG ARG ARG SER HIS LYS GLN ASN ARG SEQRES 2 C 17 ARG GLU ARG GLY SEQRES 1 E 17 ALA LYS LYS GLN ARG ARG ARG SER HIS LYS GLN ASN ARG SEQRES 2 E 17 ARG GLU ARG GLY SEQRES 1 A 459 GLU ASN LEU PRO ASP MET ILE SER GLY VAL TRP SER ASP SEQRES 2 A 459 ASP SER SER MET GLN LEU GLU CYS THR THR GLN PHE ARG SEQRES 3 A 459 LYS LEU LEU SER ILE GLU ARG ASN PRO PRO ILE GLU GLU SEQRES 4 A 459 VAL ILE GLN SER GLY VAL VAL PRO ARG PHE VAL GLU PHE SEQRES 5 A 459 LEU ALA ARG GLU ASP TYR PRO GLN LEU GLN PHE GLU ALA SEQRES 6 A 459 ALA TRP ALA LEU THR ASN ILE ALA SER GLY THR SER GLU SEQRES 7 A 459 ASN THR LYS VAL VAL ILE ASP TYR GLY SER VAL PRO ILE SEQRES 8 A 459 PHE VAL ARG LEU LEU SER SER PRO SER ASP ASP VAL ARG SEQRES 9 A 459 GLU GLN ALA VAL TRP ALA LEU GLY ASN ILE ALA GLY ASP SEQRES 10 A 459 SER PRO LYS TYR ARG ASP LEU VAL LEU GLY HIS GLY ALA SEQRES 11 A 459 LEU ALA PRO LEU LEU ALA GLN PHE ASN GLU HIS ALA LYS SEQRES 12 A 459 LEU SER MET LEU ARG ASN ALA THR TRP THR LEU SER ASN SEQRES 13 A 459 PHE CYS ARG GLY LYS PRO GLN PRO GLN PHE GLU GLN THR SEQRES 14 A 459 LYS GLU ALA LEU PRO THR LEU ALA ARG LEU ILE HIS SER SEQRES 15 A 459 ASN ASP GLU GLU VAL LEU THR ASP ALA CYS TRP ALA LEU SEQRES 16 A 459 SER TYR LEU SER ASP GLY THR ASN ASP LYS ILE GLN ALA SEQRES 17 A 459 VAL ILE GLU ALA GLY VAL CYS PRO ARG LEU ILE GLU LEU SEQRES 18 A 459 LEU LEU HIS SER SER PRO SER VAL LEU ILE PRO ALA LEU SEQRES 19 A 459 ARG THR VAL GLY ASN ILE VAL THR GLY ASP ASP ILE GLN SEQRES 20 A 459 THR GLN VAL ILE ILE ASP HIS HIS ALA LEU PRO CYS LEU SEQRES 21 A 459 LEU ASN LEU LEU THR GLN ASN TYR LYS LYS SER ILE LYS SEQRES 22 A 459 LYS GLU ALA CYS TRP THR ILE SER ASN ILE THR ALA GLY SEQRES 23 A 459 SER ARG ASN GLN ILE GLN ALA VAL ILE GLU ALA GLY ILE SEQRES 24 A 459 ILE ALA PRO LEU VAL HIS LEU LEU GLN ASN ALA GLU PHE SEQRES 25 A 459 GLU ILE LYS LYS GLU ALA ALA TRP ALA ILE SER ASN ALA SEQRES 26 A 459 THR SER GLY GLY ASN HIS ASP GLN ILE LYS PHE LEU VAL SEQRES 27 A 459 SER GLN GLY CYS ILE LYS PRO LEU CYS ASP LEU LEU VAL SEQRES 28 A 459 CYS PRO ASP PRO ARG ILE VAL THR VAL CYS LEU GLU GLY SEQRES 29 A 459 LEU GLU ASN ILE LEU LYS ILE GLY GLU ALA ASP LYS ASP SEQRES 30 A 459 LEU GLY ASN THR GLU GLY VAL ASN VAL TYR ALA GLN LEU SEQRES 31 A 459 ILE ASP GLU ALA GLU GLY LEU GLU LYS ILE GLU ASN LEU SEQRES 32 A 459 GLN SER HIS ASP ASN THR GLU ILE TYR GLU LYS ALA VAL SEQRES 33 A 459 LYS ILE LEU GLU THR TYR TRP LEU GLU GLU ASP ASP GLU SEQRES 34 A 459 GLN LEU PRO SER ALA ASP ALA GLN HIS SER GLY PHE ASN SEQRES 35 A 459 PHE GLY GLY GLY GLU LEU PRO LEU PRO SER GLY GLY PHE SEQRES 36 A 459 ASN PHE SER SER SEQRES 1 D 17 ALA LYS LYS GLN ARG ARG ARG SER HIS LYS GLN ASN ARG SEQRES 2 D 17 ARG GLU ARG GLY SEQRES 1 F 17 ALA LYS LYS GLN ARG ARG ARG SER HIS LYS GLN ASN ARG SEQRES 2 F 17 ARG GLU ARG GLY SEQRES 1 B 459 GLU ASN LEU PRO ASP MET ILE SER GLY VAL TRP SER ASP SEQRES 2 B 459 ASP SER SER MET GLN LEU GLU CYS THR THR GLN PHE ARG SEQRES 3 B 459 LYS LEU LEU SER ILE GLU ARG ASN PRO PRO ILE GLU GLU SEQRES 4 B 459 VAL ILE GLN SER GLY VAL VAL PRO ARG PHE VAL GLU PHE SEQRES 5 B 459 LEU ALA ARG GLU ASP TYR PRO GLN LEU GLN PHE GLU ALA SEQRES 6 B 459 ALA TRP ALA LEU THR ASN ILE ALA SER GLY THR SER GLU SEQRES 7 B 459 ASN THR LYS VAL VAL ILE ASP TYR GLY SER VAL PRO ILE SEQRES 8 B 459 PHE VAL ARG LEU LEU SER SER PRO SER ASP ASP VAL ARG SEQRES 9 B 459 GLU GLN ALA VAL TRP ALA LEU GLY ASN ILE ALA GLY ASP SEQRES 10 B 459 SER PRO LYS TYR ARG ASP LEU VAL LEU GLY HIS GLY ALA SEQRES 11 B 459 LEU ALA PRO LEU LEU ALA GLN PHE ASN GLU HIS ALA LYS SEQRES 12 B 459 LEU SER MET LEU ARG ASN ALA THR TRP THR LEU SER ASN SEQRES 13 B 459 PHE CYS ARG GLY LYS PRO GLN PRO GLN PHE GLU GLN THR SEQRES 14 B 459 LYS GLU ALA LEU PRO THR LEU ALA ARG LEU ILE HIS SER SEQRES 15 B 459 ASN ASP GLU GLU VAL LEU THR ASP ALA CYS TRP ALA LEU SEQRES 16 B 459 SER TYR LEU SER ASP GLY THR ASN ASP LYS ILE GLN ALA SEQRES 17 B 459 VAL ILE GLU ALA GLY VAL CYS PRO ARG LEU ILE GLU LEU SEQRES 18 B 459 LEU LEU HIS SER SER PRO SER VAL LEU ILE PRO ALA LEU SEQRES 19 B 459 ARG THR VAL GLY ASN ILE VAL THR GLY ASP ASP ILE GLN SEQRES 20 B 459 THR GLN VAL ILE ILE ASP HIS HIS ALA LEU PRO CYS LEU SEQRES 21 B 459 LEU ASN LEU LEU THR GLN ASN TYR LYS LYS SER ILE LYS SEQRES 22 B 459 LYS GLU ALA CYS TRP THR ILE SER ASN ILE THR ALA GLY SEQRES 23 B 459 SER ARG ASN GLN ILE GLN ALA VAL ILE GLU ALA GLY ILE SEQRES 24 B 459 ILE ALA PRO LEU VAL HIS LEU LEU GLN ASN ALA GLU PHE SEQRES 25 B 459 GLU ILE LYS LYS GLU ALA ALA TRP ALA ILE SER ASN ALA SEQRES 26 B 459 THR SER GLY GLY ASN HIS ASP GLN ILE LYS PHE LEU VAL SEQRES 27 B 459 SER GLN GLY CYS ILE LYS PRO LEU CYS ASP LEU LEU VAL SEQRES 28 B 459 CYS PRO ASP PRO ARG ILE VAL THR VAL CYS LEU GLU GLY SEQRES 29 B 459 LEU GLU ASN ILE LEU LYS ILE GLY GLU ALA ASP LYS ASP SEQRES 30 B 459 LEU GLY ASN THR GLU GLY VAL ASN VAL TYR ALA GLN LEU SEQRES 31 B 459 ILE ASP GLU ALA GLU GLY LEU GLU LYS ILE GLU ASN LEU SEQRES 32 B 459 GLN SER HIS ASP ASN THR GLU ILE TYR GLU LYS ALA VAL SEQRES 33 B 459 LYS ILE LEU GLU THR TYR TRP LEU GLU GLU ASP ASP GLU SEQRES 34 B 459 GLN LEU PRO SER ALA ASP ALA GLN HIS SER GLY PHE ASN SEQRES 35 B 459 PHE GLY GLY GLY GLU LEU PRO LEU PRO SER GLY GLY PHE SEQRES 36 B 459 ASN PHE SER SER FORMUL 7 HOH *358(H2 O) HELIX 1 AA1 ASN A 75 TRP A 84 1 10 HELIX 2 AA2 ASP A 87 SER A 103 1 17 HELIX 3 AA3 PRO A 109 SER A 116 1 8 HELIX 4 AA4 VAL A 118 ALA A 127 1 10 HELIX 5 AA5 TYR A 131 SER A 147 1 17 HELIX 6 AA6 THR A 149 TYR A 159 1 11 HELIX 7 AA7 GLY A 160 LEU A 169 1 10 HELIX 8 AA8 SER A 173 ASP A 190 1 18 HELIX 9 AA9 SER A 191 HIS A 201 1 11 HELIX 10 AB1 ALA A 203 ALA A 209 1 7 HELIX 11 AB2 LYS A 216 ARG A 232 1 17 HELIX 12 AB3 GLN A 238 LYS A 243 1 6 HELIX 13 AB4 ALA A 245 ILE A 253 1 9 HELIX 14 AB5 ASP A 257 SER A 272 1 16 HELIX 15 AB6 THR A 275 ALA A 285 1 11 HELIX 16 AB7 VAL A 287 LEU A 294 1 8 HELIX 17 AB8 LEU A 295 HIS A 297 5 3 HELIX 18 AB9 SER A 299 VAL A 314 1 16 HELIX 19 AC1 ASP A 317 HIS A 327 1 11 HELIX 20 AC2 HIS A 328 GLN A 339 1 12 HELIX 21 AC3 LYS A 342 ALA A 358 1 17 HELIX 22 AC4 SER A 360 ALA A 370 1 11 HELIX 23 AC5 ILE A 372 ALA A 383 1 12 HELIX 24 AC6 GLU A 384 GLY A 402 1 19 HELIX 25 AC7 ASN A 403 GLN A 413 1 11 HELIX 26 AC8 CYS A 415 LEU A 422 1 8 HELIX 27 AC9 LEU A 423 CYS A 425 5 3 HELIX 28 AD1 ASP A 427 GLY A 452 1 26 HELIX 29 AD2 ASN A 458 ALA A 467 1 10 HELIX 30 AD3 GLU A 468 LEU A 476 1 9 HELIX 31 AD4 ASN A 481 TRP A 496 1 16 HELIX 32 AD5 ASN B 75 TRP B 84 1 10 HELIX 33 AD6 ASP B 87 SER B 103 1 17 HELIX 34 AD7 PRO B 109 GLY B 117 1 9 HELIX 35 AD8 VAL B 118 ALA B 127 1 10 HELIX 36 AD9 TYR B 131 SER B 147 1 17 HELIX 37 AE1 THR B 149 TYR B 159 1 11 HELIX 38 AE2 GLY B 160 LEU B 169 1 10 HELIX 39 AE3 SER B 173 SER B 191 1 19 HELIX 40 AE4 SER B 191 HIS B 201 1 11 HELIX 41 AE5 ALA B 203 ALA B 209 1 7 HELIX 42 AE6 LYS B 216 ARG B 232 1 17 HELIX 43 AE7 GLN B 238 LYS B 243 1 6 HELIX 44 AE8 ALA B 245 ILE B 253 1 9 HELIX 45 AE9 ASP B 257 SER B 272 1 16 HELIX 46 AF1 THR B 275 ALA B 285 1 11 HELIX 47 AF2 VAL B 287 LEU B 294 1 8 HELIX 48 AF3 LEU B 295 HIS B 297 5 3 HELIX 49 AF4 SER B 299 VAL B 314 1 16 HELIX 50 AF5 ASP B 317 HIS B 327 1 11 HELIX 51 AF6 HIS B 328 GLN B 339 1 12 HELIX 52 AF7 LYS B 342 ALA B 358 1 17 HELIX 53 AF8 SER B 360 ALA B 370 1 11 HELIX 54 AF9 ILE B 372 ALA B 383 1 12 HELIX 55 AG1 GLU B 384 GLY B 402 1 19 HELIX 56 AG2 ASN B 403 GLN B 413 1 11 HELIX 57 AG3 CYS B 415 LEU B 422 1 8 HELIX 58 AG4 LEU B 423 CYS B 425 5 3 HELIX 59 AG5 ASP B 427 LEU B 451 1 25 HELIX 60 AG6 ASN B 458 ALA B 467 1 10 HELIX 61 AG7 GLU B 468 LEU B 476 1 9 HELIX 62 AG8 ASN B 481 TRP B 496 1 16 CISPEP 1 LYS A 234 PRO A 235 0 2.07 CISPEP 2 LYS B 234 PRO B 235 0 5.98 CRYST1 62.929 77.532 98.575 90.00 90.16 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015891 0.000000 0.000045 0.00000 SCALE2 0.000000 0.012898 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010145 0.00000 MASTER 456 0 0 62 0 0 0 6 7052 6 0 80 END