data_21FI # _entry.id 21FI # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.413 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 21FI pdb_000021fi 10.2210/pdb21fi/pdb WWPDB D_1300066573 ? ? EMDB EMD-67626 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2026-05-20 ? 2 'EM metadata' 1 0 2026-05-20 ? 3 'Half map' 1 0 2026-05-20 1 4 'Half map' 1 0 2026-05-20 2 5 Image 1 0 2026-05-20 ? 6 'Primary map' 1 0 2026-05-20 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'EM metadata' repository 'Initial release' ? ? 3 3 'Half map' repository 'Initial release' ? ? 4 4 'Half map' repository 'Initial release' ? ? 5 5 Image repository 'Initial release' ? ? 6 6 'Primary map' repository 'Initial release' ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 21FI _pdbx_database_status.recvd_initial_deposition_date 2025-12-11 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBC _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Cryo-EM structure of DddT in closed DMSP-bound conformation' _pdbx_database_related.db_id EMD-67626 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 2 _pdbx_contact_author.email wangpeng3331@ouc.edu.cn _pdbx_contact_author.name_first Peng _pdbx_contact_author.name_last Wang _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-4983-9953 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Zhu, W.J.' 1 0009-0000-6133-9014 'Wang, P.' 2 0000-0002-4983-9953 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Embo J.' _citation.journal_id_ASTM EMJODG _citation.journal_id_CSD 0897 _citation.journal_id_ISSN 1460-2075 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Structural insights into bacterial dimethylsulfoniopropionate import by BCCT-family transporters.' _citation.year 2026 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s44318-026-00798-w _citation.pdbx_database_id_PubMed 42104083 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zhang, Y.Z.' 1 0000-0002-2017-1005 primary 'Zhu, W.J.' 2 0009-0000-6133-9014 primary 'Li, K.' 3 ? primary 'Ding, H.T.' 4 ? primary 'Hattori, M.' 5 0000-0002-5327-5337 primary 'Liu, S.' 6 ? primary 'Ge, C.' 7 ? primary 'Qin, Q.L.' 8 ? primary 'Teng, Z.J.' 9 ? primary 'Liu, N.H.' 10 ? primary 'Cao, H.Y.' 11 0000-0003-1365-2094 primary 'Li, C.Y.' 12 0000-0002-1151-4897 primary 'Chen, X.L.' 13 0000-0003-2991-3631 primary 'Shen, Q.T.' 14 0000-0003-1672-6300 primary 'Todd, J.D.' 15 0000-0003-0777-9312 primary 'Liu, L.N.' 16 0000-0002-8884-4819 primary 'Wang, P.' 17 0000-0002-4983-9953 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man DddT 54909.449 1 ? ? ? ? 2 non-polymer syn '3-(dimethyl-lambda~4~-sulfanyl)propanoic acid' 136.213 1 ? ? ? ? 3 non-polymer syn 'SODIUM ION' 22.990 2 ? ? ? ? 4 water nat water 18.015 3 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;NKIDWFIFISTFVLIVAICLPLVLYPEKGGELVSQANSFVTSNFGMVFLWAGMGGFAFLTYLFFSEHGKIKFGTKDEKPE FSNFSWGAMVFCAGVASGLVYWGTIEWAYYFTAPPYGIEPKSTDAAEIAAAYGIFHWGPSAWAFFVLPSLPIAYSYYILK VPVLRLSEICRIVIGKHSDGVLGKVIDIIFMFGILGAAGTSLGLGTPLVAAGISKITGIESSTSMTVFVLVLCTALFTWS AYSGLKRGLKLLSDLAIICSVILLTYVLLVGPTEFILKMGTNSVGLLFTNFVRWNLYTDPVSGSGFVESWTVFYWAWWIV YTPFMGLFIAKISRGRTIRQVILGGIAWGTLGCAAYFSILGNYAMHLELTKELSVTGLLEQIGAPATIMEVIGTLPLGSV VVIVFSFIALIFLATTFDSAAYMMASSTTPTLGLNEEPAKWNRLFWALTLFILPGTLMVLGGDLKTLQTASILTAIPFIF VIMLLVVALMKMLKTGEHFNQD ; _entity_poly.pdbx_seq_one_letter_code_can ;NKIDWFIFISTFVLIVAICLPLVLYPEKGGELVSQANSFVTSNFGMVFLWAGMGGFAFLTYLFFSEHGKIKFGTKDEKPE FSNFSWGAMVFCAGVASGLVYWGTIEWAYYFTAPPYGIEPKSTDAAEIAAAYGIFHWGPSAWAFFVLPSLPIAYSYYILK VPVLRLSEICRIVIGKHSDGVLGKVIDIIFMFGILGAAGTSLGLGTPLVAAGISKITGIESSTSMTVFVLVLCTALFTWS AYSGLKRGLKLLSDLAIICSVILLTYVLLVGPTEFILKMGTNSVGLLFTNFVRWNLYTDPVSGSGFVESWTVFYWAWWIV YTPFMGLFIAKISRGRTIRQVILGGIAWGTLGCAAYFSILGNYAMHLELTKELSVTGLLEQIGAPATIMEVIGTLPLGSV VVIVFSFIALIFLATTFDSAAYMMASSTTPTLGLNEEPAKWNRLFWALTLFILPGTLMVLGGDLKTLQTASILTAIPFIF VIMLLVVALMKMLKTGEHFNQD ; _entity_poly.pdbx_strand_id D _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '3-(dimethyl-lambda~4~-sulfanyl)propanoic acid' DQY 3 'SODIUM ION' NA 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASN n 1 2 LYS n 1 3 ILE n 1 4 ASP n 1 5 TRP n 1 6 PHE n 1 7 ILE n 1 8 PHE n 1 9 ILE n 1 10 SER n 1 11 THR n 1 12 PHE n 1 13 VAL n 1 14 LEU n 1 15 ILE n 1 16 VAL n 1 17 ALA n 1 18 ILE n 1 19 CYS n 1 20 LEU n 1 21 PRO n 1 22 LEU n 1 23 VAL n 1 24 LEU n 1 25 TYR n 1 26 PRO n 1 27 GLU n 1 28 LYS n 1 29 GLY n 1 30 GLY n 1 31 GLU n 1 32 LEU n 1 33 VAL n 1 34 SER n 1 35 GLN n 1 36 ALA n 1 37 ASN n 1 38 SER n 1 39 PHE n 1 40 VAL n 1 41 THR n 1 42 SER n 1 43 ASN n 1 44 PHE n 1 45 GLY n 1 46 MET n 1 47 VAL n 1 48 PHE n 1 49 LEU n 1 50 TRP n 1 51 ALA n 1 52 GLY n 1 53 MET n 1 54 GLY n 1 55 GLY n 1 56 PHE n 1 57 ALA n 1 58 PHE n 1 59 LEU n 1 60 THR n 1 61 TYR n 1 62 LEU n 1 63 PHE n 1 64 PHE n 1 65 SER n 1 66 GLU n 1 67 HIS n 1 68 GLY n 1 69 LYS n 1 70 ILE n 1 71 LYS n 1 72 PHE n 1 73 GLY n 1 74 THR n 1 75 LYS n 1 76 ASP n 1 77 GLU n 1 78 LYS n 1 79 PRO n 1 80 GLU n 1 81 PHE n 1 82 SER n 1 83 ASN n 1 84 PHE n 1 85 SER n 1 86 TRP n 1 87 GLY n 1 88 ALA n 1 89 MET n 1 90 VAL n 1 91 PHE n 1 92 CYS n 1 93 ALA n 1 94 GLY n 1 95 VAL n 1 96 ALA n 1 97 SER n 1 98 GLY n 1 99 LEU n 1 100 VAL n 1 101 TYR n 1 102 TRP n 1 103 GLY n 1 104 THR n 1 105 ILE n 1 106 GLU n 1 107 TRP n 1 108 ALA n 1 109 TYR n 1 110 TYR n 1 111 PHE n 1 112 THR n 1 113 ALA n 1 114 PRO n 1 115 PRO n 1 116 TYR n 1 117 GLY n 1 118 ILE n 1 119 GLU n 1 120 PRO n 1 121 LYS n 1 122 SER n 1 123 THR n 1 124 ASP n 1 125 ALA n 1 126 ALA n 1 127 GLU n 1 128 ILE n 1 129 ALA n 1 130 ALA n 1 131 ALA n 1 132 TYR n 1 133 GLY n 1 134 ILE n 1 135 PHE n 1 136 HIS n 1 137 TRP n 1 138 GLY n 1 139 PRO n 1 140 SER n 1 141 ALA n 1 142 TRP n 1 143 ALA n 1 144 PHE n 1 145 PHE n 1 146 VAL n 1 147 LEU n 1 148 PRO n 1 149 SER n 1 150 LEU n 1 151 PRO n 1 152 ILE n 1 153 ALA n 1 154 TYR n 1 155 SER n 1 156 TYR n 1 157 TYR n 1 158 ILE n 1 159 LEU n 1 160 LYS n 1 161 VAL n 1 162 PRO n 1 163 VAL n 1 164 LEU n 1 165 ARG n 1 166 LEU n 1 167 SER n 1 168 GLU n 1 169 ILE n 1 170 CYS n 1 171 ARG n 1 172 ILE n 1 173 VAL n 1 174 ILE n 1 175 GLY n 1 176 LYS n 1 177 HIS n 1 178 SER n 1 179 ASP n 1 180 GLY n 1 181 VAL n 1 182 LEU n 1 183 GLY n 1 184 LYS n 1 185 VAL n 1 186 ILE n 1 187 ASP n 1 188 ILE n 1 189 ILE n 1 190 PHE n 1 191 MET n 1 192 PHE n 1 193 GLY n 1 194 ILE n 1 195 LEU n 1 196 GLY n 1 197 ALA n 1 198 ALA n 1 199 GLY n 1 200 THR n 1 201 SER n 1 202 LEU n 1 203 GLY n 1 204 LEU n 1 205 GLY n 1 206 THR n 1 207 PRO n 1 208 LEU n 1 209 VAL n 1 210 ALA n 1 211 ALA n 1 212 GLY n 1 213 ILE n 1 214 SER n 1 215 LYS n 1 216 ILE n 1 217 THR n 1 218 GLY n 1 219 ILE n 1 220 GLU n 1 221 SER n 1 222 SER n 1 223 THR n 1 224 SER n 1 225 MET n 1 226 THR n 1 227 VAL n 1 228 PHE n 1 229 VAL n 1 230 LEU n 1 231 VAL n 1 232 LEU n 1 233 CYS n 1 234 THR n 1 235 ALA n 1 236 LEU n 1 237 PHE n 1 238 THR n 1 239 TRP n 1 240 SER n 1 241 ALA n 1 242 TYR n 1 243 SER n 1 244 GLY n 1 245 LEU n 1 246 LYS n 1 247 ARG n 1 248 GLY n 1 249 LEU n 1 250 LYS n 1 251 LEU n 1 252 LEU n 1 253 SER n 1 254 ASP n 1 255 LEU n 1 256 ALA n 1 257 ILE n 1 258 ILE n 1 259 CYS n 1 260 SER n 1 261 VAL n 1 262 ILE n 1 263 LEU n 1 264 LEU n 1 265 THR n 1 266 TYR n 1 267 VAL n 1 268 LEU n 1 269 LEU n 1 270 VAL n 1 271 GLY n 1 272 PRO n 1 273 THR n 1 274 GLU n 1 275 PHE n 1 276 ILE n 1 277 LEU n 1 278 LYS n 1 279 MET n 1 280 GLY n 1 281 THR n 1 282 ASN n 1 283 SER n 1 284 VAL n 1 285 GLY n 1 286 LEU n 1 287 LEU n 1 288 PHE n 1 289 THR n 1 290 ASN n 1 291 PHE n 1 292 VAL n 1 293 ARG n 1 294 TRP n 1 295 ASN n 1 296 LEU n 1 297 TYR n 1 298 THR n 1 299 ASP n 1 300 PRO n 1 301 VAL n 1 302 SER n 1 303 GLY n 1 304 SER n 1 305 GLY n 1 306 PHE n 1 307 VAL n 1 308 GLU n 1 309 SER n 1 310 TRP n 1 311 THR n 1 312 VAL n 1 313 PHE n 1 314 TYR n 1 315 TRP n 1 316 ALA n 1 317 TRP n 1 318 TRP n 1 319 ILE n 1 320 VAL n 1 321 TYR n 1 322 THR n 1 323 PRO n 1 324 PHE n 1 325 MET n 1 326 GLY n 1 327 LEU n 1 328 PHE n 1 329 ILE n 1 330 ALA n 1 331 LYS n 1 332 ILE n 1 333 SER n 1 334 ARG n 1 335 GLY n 1 336 ARG n 1 337 THR n 1 338 ILE n 1 339 ARG n 1 340 GLN n 1 341 VAL n 1 342 ILE n 1 343 LEU n 1 344 GLY n 1 345 GLY n 1 346 ILE n 1 347 ALA n 1 348 TRP n 1 349 GLY n 1 350 THR n 1 351 LEU n 1 352 GLY n 1 353 CYS n 1 354 ALA n 1 355 ALA n 1 356 TYR n 1 357 PHE n 1 358 SER n 1 359 ILE n 1 360 LEU n 1 361 GLY n 1 362 ASN n 1 363 TYR n 1 364 ALA n 1 365 MET n 1 366 HIS n 1 367 LEU n 1 368 GLU n 1 369 LEU n 1 370 THR n 1 371 LYS n 1 372 GLU n 1 373 LEU n 1 374 SER n 1 375 VAL n 1 376 THR n 1 377 GLY n 1 378 LEU n 1 379 LEU n 1 380 GLU n 1 381 GLN n 1 382 ILE n 1 383 GLY n 1 384 ALA n 1 385 PRO n 1 386 ALA n 1 387 THR n 1 388 ILE n 1 389 MET n 1 390 GLU n 1 391 VAL n 1 392 ILE n 1 393 GLY n 1 394 THR n 1 395 LEU n 1 396 PRO n 1 397 LEU n 1 398 GLY n 1 399 SER n 1 400 VAL n 1 401 VAL n 1 402 VAL n 1 403 ILE n 1 404 VAL n 1 405 PHE n 1 406 SER n 1 407 PHE n 1 408 ILE n 1 409 ALA n 1 410 LEU n 1 411 ILE n 1 412 PHE n 1 413 LEU n 1 414 ALA n 1 415 THR n 1 416 THR n 1 417 PHE n 1 418 ASP n 1 419 SER n 1 420 ALA n 1 421 ALA n 1 422 TYR n 1 423 MET n 1 424 MET n 1 425 ALA n 1 426 SER n 1 427 SER n 1 428 THR n 1 429 THR n 1 430 PRO n 1 431 THR n 1 432 LEU n 1 433 GLY n 1 434 LEU n 1 435 ASN n 1 436 GLU n 1 437 GLU n 1 438 PRO n 1 439 ALA n 1 440 LYS n 1 441 TRP n 1 442 ASN n 1 443 ARG n 1 444 LEU n 1 445 PHE n 1 446 TRP n 1 447 ALA n 1 448 LEU n 1 449 THR n 1 450 LEU n 1 451 PHE n 1 452 ILE n 1 453 LEU n 1 454 PRO n 1 455 GLY n 1 456 THR n 1 457 LEU n 1 458 MET n 1 459 VAL n 1 460 LEU n 1 461 GLY n 1 462 GLY n 1 463 ASP n 1 464 LEU n 1 465 LYS n 1 466 THR n 1 467 LEU n 1 468 GLN n 1 469 THR n 1 470 ALA n 1 471 SER n 1 472 ILE n 1 473 LEU n 1 474 THR n 1 475 ALA n 1 476 ILE n 1 477 PRO n 1 478 PHE n 1 479 ILE n 1 480 PHE n 1 481 VAL n 1 482 ILE n 1 483 MET n 1 484 LEU n 1 485 LEU n 1 486 VAL n 1 487 VAL n 1 488 ALA n 1 489 LEU n 1 490 MET n 1 491 LYS n 1 492 MET n 1 493 LEU n 1 494 LYS n 1 495 THR n 1 496 GLY n 1 497 GLU n 1 498 HIS n 1 499 PHE n 1 500 ASN n 1 501 GLN n 1 502 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 502 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Psychrobacter sp. D2' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2759702 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DQY non-polymer . '3-(dimethyl-lambda~4~-sulfanyl)propanoic acid' ? 'C5 H12 O2 S' 136.213 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASN 1 4 4 ASN ASN D . n A 1 2 LYS 2 5 5 LYS LYS D . n A 1 3 ILE 3 6 6 ILE ILE D . n A 1 4 ASP 4 7 7 ASP ASP D . n A 1 5 TRP 5 8 8 TRP TRP D . n A 1 6 PHE 6 9 9 PHE PHE D . n A 1 7 ILE 7 10 10 ILE ILE D . n A 1 8 PHE 8 11 11 PHE PHE D . n A 1 9 ILE 9 12 12 ILE ILE D . n A 1 10 SER 10 13 13 SER SER D . n A 1 11 THR 11 14 14 THR THR D . n A 1 12 PHE 12 15 15 PHE PHE D . n A 1 13 VAL 13 16 16 VAL VAL D . n A 1 14 LEU 14 17 17 LEU LEU D . n A 1 15 ILE 15 18 18 ILE ILE D . n A 1 16 VAL 16 19 19 VAL VAL D . n A 1 17 ALA 17 20 20 ALA ALA D . n A 1 18 ILE 18 21 21 ILE ILE D . n A 1 19 CYS 19 22 22 CYS CYS D . n A 1 20 LEU 20 23 23 LEU LEU D . n A 1 21 PRO 21 24 24 PRO PRO D . n A 1 22 LEU 22 25 25 LEU LEU D . n A 1 23 VAL 23 26 26 VAL VAL D . n A 1 24 LEU 24 27 27 LEU LEU D . n A 1 25 TYR 25 28 28 TYR TYR D . n A 1 26 PRO 26 29 29 PRO PRO D . n A 1 27 GLU 27 30 30 GLU GLU D . n A 1 28 LYS 28 31 31 LYS LYS D . n A 1 29 GLY 29 32 32 GLY GLY D . n A 1 30 GLY 30 33 33 GLY GLY D . n A 1 31 GLU 31 34 34 GLU GLU D . n A 1 32 LEU 32 35 35 LEU LEU D . n A 1 33 VAL 33 36 36 VAL VAL D . n A 1 34 SER 34 37 37 SER SER D . n A 1 35 GLN 35 38 38 GLN GLN D . n A 1 36 ALA 36 39 39 ALA ALA D . n A 1 37 ASN 37 40 40 ASN ASN D . n A 1 38 SER 38 41 41 SER SER D . n A 1 39 PHE 39 42 42 PHE PHE D . n A 1 40 VAL 40 43 43 VAL VAL D . n A 1 41 THR 41 44 44 THR THR D . n A 1 42 SER 42 45 45 SER SER D . n A 1 43 ASN 43 46 46 ASN ASN D . n A 1 44 PHE 44 47 47 PHE PHE D . n A 1 45 GLY 45 48 48 GLY GLY D . n A 1 46 MET 46 49 49 MET MET D . n A 1 47 VAL 47 50 50 VAL VAL D . n A 1 48 PHE 48 51 51 PHE PHE D . n A 1 49 LEU 49 52 52 LEU LEU D . n A 1 50 TRP 50 53 53 TRP TRP D . n A 1 51 ALA 51 54 54 ALA ALA D . n A 1 52 GLY 52 55 55 GLY GLY D . n A 1 53 MET 53 56 56 MET MET D . n A 1 54 GLY 54 57 57 GLY GLY D . n A 1 55 GLY 55 58 58 GLY GLY D . n A 1 56 PHE 56 59 59 PHE PHE D . n A 1 57 ALA 57 60 60 ALA ALA D . n A 1 58 PHE 58 61 61 PHE PHE D . n A 1 59 LEU 59 62 62 LEU LEU D . n A 1 60 THR 60 63 63 THR THR D . n A 1 61 TYR 61 64 64 TYR TYR D . n A 1 62 LEU 62 65 65 LEU LEU D . n A 1 63 PHE 63 66 66 PHE PHE D . n A 1 64 PHE 64 67 67 PHE PHE D . n A 1 65 SER 65 68 68 SER SER D . n A 1 66 GLU 66 69 69 GLU GLU D . n A 1 67 HIS 67 70 70 HIS HIS D . n A 1 68 GLY 68 71 71 GLY GLY D . n A 1 69 LYS 69 72 72 LYS LYS D . n A 1 70 ILE 70 73 73 ILE ILE D . n A 1 71 LYS 71 74 74 LYS LYS D . n A 1 72 PHE 72 75 75 PHE PHE D . n A 1 73 GLY 73 76 76 GLY GLY D . n A 1 74 THR 74 77 77 THR THR D . n A 1 75 LYS 75 78 78 LYS LYS D . n A 1 76 ASP 76 79 79 ASP ASP D . n A 1 77 GLU 77 80 80 GLU GLU D . n A 1 78 LYS 78 81 81 LYS LYS D . n A 1 79 PRO 79 82 82 PRO PRO D . n A 1 80 GLU 80 83 83 GLU GLU D . n A 1 81 PHE 81 84 84 PHE PHE D . n A 1 82 SER 82 85 85 SER SER D . n A 1 83 ASN 83 86 86 ASN ASN D . n A 1 84 PHE 84 87 87 PHE PHE D . n A 1 85 SER 85 88 88 SER SER D . n A 1 86 TRP 86 89 89 TRP TRP D . n A 1 87 GLY 87 90 90 GLY GLY D . n A 1 88 ALA 88 91 91 ALA ALA D . n A 1 89 MET 89 92 92 MET MET D . n A 1 90 VAL 90 93 93 VAL VAL D . n A 1 91 PHE 91 94 94 PHE PHE D . n A 1 92 CYS 92 95 95 CYS CYS D . n A 1 93 ALA 93 96 96 ALA ALA D . n A 1 94 GLY 94 97 97 GLY GLY D . n A 1 95 VAL 95 98 98 VAL VAL D . n A 1 96 ALA 96 99 99 ALA ALA D . n A 1 97 SER 97 100 100 SER SER D . n A 1 98 GLY 98 101 101 GLY GLY D . n A 1 99 LEU 99 102 102 LEU LEU D . n A 1 100 VAL 100 103 103 VAL VAL D . n A 1 101 TYR 101 104 104 TYR TYR D . n A 1 102 TRP 102 105 105 TRP TRP D . n A 1 103 GLY 103 106 106 GLY GLY D . n A 1 104 THR 104 107 107 THR THR D . n A 1 105 ILE 105 108 108 ILE ILE D . n A 1 106 GLU 106 109 109 GLU GLU D . n A 1 107 TRP 107 110 110 TRP TRP D . n A 1 108 ALA 108 111 111 ALA ALA D . n A 1 109 TYR 109 112 112 TYR TYR D . n A 1 110 TYR 110 113 113 TYR TYR D . n A 1 111 PHE 111 114 114 PHE PHE D . n A 1 112 THR 112 115 115 THR THR D . n A 1 113 ALA 113 116 116 ALA ALA D . n A 1 114 PRO 114 117 117 PRO PRO D . n A 1 115 PRO 115 118 118 PRO PRO D . n A 1 116 TYR 116 119 119 TYR TYR D . n A 1 117 GLY 117 120 120 GLY GLY D . n A 1 118 ILE 118 121 121 ILE ILE D . n A 1 119 GLU 119 122 122 GLU GLU D . n A 1 120 PRO 120 123 123 PRO PRO D . n A 1 121 LYS 121 124 124 LYS LYS D . n A 1 122 SER 122 125 125 SER SER D . n A 1 123 THR 123 126 126 THR THR D . n A 1 124 ASP 124 127 127 ASP ASP D . n A 1 125 ALA 125 128 128 ALA ALA D . n A 1 126 ALA 126 129 129 ALA ALA D . n A 1 127 GLU 127 130 130 GLU GLU D . n A 1 128 ILE 128 131 131 ILE ILE D . n A 1 129 ALA 129 132 132 ALA ALA D . n A 1 130 ALA 130 133 133 ALA ALA D . n A 1 131 ALA 131 134 134 ALA ALA D . n A 1 132 TYR 132 135 135 TYR TYR D . n A 1 133 GLY 133 136 136 GLY GLY D . n A 1 134 ILE 134 137 137 ILE ILE D . n A 1 135 PHE 135 138 138 PHE PHE D . n A 1 136 HIS 136 139 139 HIS HIS D . n A 1 137 TRP 137 140 140 TRP TRP D . n A 1 138 GLY 138 141 141 GLY GLY D . n A 1 139 PRO 139 142 142 PRO PRO D . n A 1 140 SER 140 143 143 SER SER D . n A 1 141 ALA 141 144 144 ALA ALA D . n A 1 142 TRP 142 145 145 TRP TRP D . n A 1 143 ALA 143 146 146 ALA ALA D . n A 1 144 PHE 144 147 147 PHE PHE D . n A 1 145 PHE 145 148 148 PHE PHE D . n A 1 146 VAL 146 149 149 VAL VAL D . n A 1 147 LEU 147 150 150 LEU LEU D . n A 1 148 PRO 148 151 151 PRO PRO D . n A 1 149 SER 149 152 152 SER SER D . n A 1 150 LEU 150 153 153 LEU LEU D . n A 1 151 PRO 151 154 154 PRO PRO D . n A 1 152 ILE 152 155 155 ILE ILE D . n A 1 153 ALA 153 156 156 ALA ALA D . n A 1 154 TYR 154 157 157 TYR TYR D . n A 1 155 SER 155 158 158 SER SER D . n A 1 156 TYR 156 159 159 TYR TYR D . n A 1 157 TYR 157 160 160 TYR TYR D . n A 1 158 ILE 158 161 161 ILE ILE D . n A 1 159 LEU 159 162 162 LEU LEU D . n A 1 160 LYS 160 163 163 LYS LYS D . n A 1 161 VAL 161 164 164 VAL VAL D . n A 1 162 PRO 162 165 165 PRO PRO D . n A 1 163 VAL 163 166 166 VAL VAL D . n A 1 164 LEU 164 167 167 LEU LEU D . n A 1 165 ARG 165 168 168 ARG ARG D . n A 1 166 LEU 166 169 169 LEU LEU D . n A 1 167 SER 167 170 170 SER SER D . n A 1 168 GLU 168 171 171 GLU GLU D . n A 1 169 ILE 169 172 172 ILE ILE D . n A 1 170 CYS 170 173 173 CYS CYS D . n A 1 171 ARG 171 174 174 ARG ARG D . n A 1 172 ILE 172 175 175 ILE ILE D . n A 1 173 VAL 173 176 176 VAL VAL D . n A 1 174 ILE 174 177 177 ILE ILE D . n A 1 175 GLY 175 178 178 GLY GLY D . n A 1 176 LYS 176 179 179 LYS LYS D . n A 1 177 HIS 177 180 180 HIS HIS D . n A 1 178 SER 178 181 181 SER SER D . n A 1 179 ASP 179 182 182 ASP ASP D . n A 1 180 GLY 180 183 183 GLY GLY D . n A 1 181 VAL 181 184 184 VAL VAL D . n A 1 182 LEU 182 185 185 LEU LEU D . n A 1 183 GLY 183 186 186 GLY GLY D . n A 1 184 LYS 184 187 187 LYS LYS D . n A 1 185 VAL 185 188 188 VAL VAL D . n A 1 186 ILE 186 189 189 ILE ILE D . n A 1 187 ASP 187 190 190 ASP ASP D . n A 1 188 ILE 188 191 191 ILE ILE D . n A 1 189 ILE 189 192 192 ILE ILE D . n A 1 190 PHE 190 193 193 PHE PHE D . n A 1 191 MET 191 194 194 MET MET D . n A 1 192 PHE 192 195 195 PHE PHE D . n A 1 193 GLY 193 196 196 GLY GLY D . n A 1 194 ILE 194 197 197 ILE ILE D . n A 1 195 LEU 195 198 198 LEU LEU D . n A 1 196 GLY 196 199 199 GLY GLY D . n A 1 197 ALA 197 200 200 ALA ALA D . n A 1 198 ALA 198 201 201 ALA ALA D . n A 1 199 GLY 199 202 202 GLY GLY D . n A 1 200 THR 200 203 203 THR THR D . n A 1 201 SER 201 204 204 SER SER D . n A 1 202 LEU 202 205 205 LEU LEU D . n A 1 203 GLY 203 206 206 GLY GLY D . n A 1 204 LEU 204 207 207 LEU LEU D . n A 1 205 GLY 205 208 208 GLY GLY D . n A 1 206 THR 206 209 209 THR THR D . n A 1 207 PRO 207 210 210 PRO PRO D . n A 1 208 LEU 208 211 211 LEU LEU D . n A 1 209 VAL 209 212 212 VAL VAL D . n A 1 210 ALA 210 213 213 ALA ALA D . n A 1 211 ALA 211 214 214 ALA ALA D . n A 1 212 GLY 212 215 215 GLY GLY D . n A 1 213 ILE 213 216 216 ILE ILE D . n A 1 214 SER 214 217 217 SER SER D . n A 1 215 LYS 215 218 218 LYS LYS D . n A 1 216 ILE 216 219 219 ILE ILE D . n A 1 217 THR 217 220 220 THR THR D . n A 1 218 GLY 218 221 221 GLY GLY D . n A 1 219 ILE 219 222 222 ILE ILE D . n A 1 220 GLU 220 223 223 GLU GLU D . n A 1 221 SER 221 224 224 SER SER D . n A 1 222 SER 222 225 225 SER SER D . n A 1 223 THR 223 226 226 THR THR D . n A 1 224 SER 224 227 227 SER SER D . n A 1 225 MET 225 228 228 MET MET D . n A 1 226 THR 226 229 229 THR THR D . n A 1 227 VAL 227 230 230 VAL VAL D . n A 1 228 PHE 228 231 231 PHE PHE D . n A 1 229 VAL 229 232 232 VAL VAL D . n A 1 230 LEU 230 233 233 LEU LEU D . n A 1 231 VAL 231 234 234 VAL VAL D . n A 1 232 LEU 232 235 235 LEU LEU D . n A 1 233 CYS 233 236 236 CYS CYS D . n A 1 234 THR 234 237 237 THR THR D . n A 1 235 ALA 235 238 238 ALA ALA D . n A 1 236 LEU 236 239 239 LEU LEU D . n A 1 237 PHE 237 240 240 PHE PHE D . n A 1 238 THR 238 241 241 THR THR D . n A 1 239 TRP 239 242 242 TRP TRP D . n A 1 240 SER 240 243 243 SER SER D . n A 1 241 ALA 241 244 244 ALA ALA D . n A 1 242 TYR 242 245 245 TYR TYR D . n A 1 243 SER 243 246 246 SER SER D . n A 1 244 GLY 244 247 247 GLY GLY D . n A 1 245 LEU 245 248 248 LEU LEU D . n A 1 246 LYS 246 249 249 LYS LYS D . n A 1 247 ARG 247 250 250 ARG ARG D . n A 1 248 GLY 248 251 251 GLY GLY D . n A 1 249 LEU 249 252 252 LEU LEU D . n A 1 250 LYS 250 253 253 LYS LYS D . n A 1 251 LEU 251 254 254 LEU LEU D . n A 1 252 LEU 252 255 255 LEU LEU D . n A 1 253 SER 253 256 256 SER SER D . n A 1 254 ASP 254 257 257 ASP ASP D . n A 1 255 LEU 255 258 258 LEU LEU D . n A 1 256 ALA 256 259 259 ALA ALA D . n A 1 257 ILE 257 260 260 ILE ILE D . n A 1 258 ILE 258 261 261 ILE ILE D . n A 1 259 CYS 259 262 262 CYS CYS D . n A 1 260 SER 260 263 263 SER SER D . n A 1 261 VAL 261 264 264 VAL VAL D . n A 1 262 ILE 262 265 265 ILE ILE D . n A 1 263 LEU 263 266 266 LEU LEU D . n A 1 264 LEU 264 267 267 LEU LEU D . n A 1 265 THR 265 268 268 THR THR D . n A 1 266 TYR 266 269 269 TYR TYR D . n A 1 267 VAL 267 270 270 VAL VAL D . n A 1 268 LEU 268 271 271 LEU LEU D . n A 1 269 LEU 269 272 272 LEU LEU D . n A 1 270 VAL 270 273 273 VAL VAL D . n A 1 271 GLY 271 274 274 GLY GLY D . n A 1 272 PRO 272 275 275 PRO PRO D . n A 1 273 THR 273 276 276 THR THR D . n A 1 274 GLU 274 277 277 GLU GLU D . n A 1 275 PHE 275 278 278 PHE PHE D . n A 1 276 ILE 276 279 279 ILE ILE D . n A 1 277 LEU 277 280 280 LEU LEU D . n A 1 278 LYS 278 281 281 LYS LYS D . n A 1 279 MET 279 282 282 MET MET D . n A 1 280 GLY 280 283 283 GLY GLY D . n A 1 281 THR 281 284 284 THR THR D . n A 1 282 ASN 282 285 285 ASN ASN D . n A 1 283 SER 283 286 286 SER SER D . n A 1 284 VAL 284 287 287 VAL VAL D . n A 1 285 GLY 285 288 288 GLY GLY D . n A 1 286 LEU 286 289 289 LEU LEU D . n A 1 287 LEU 287 290 290 LEU LEU D . n A 1 288 PHE 288 291 291 PHE PHE D . n A 1 289 THR 289 292 292 THR THR D . n A 1 290 ASN 290 293 293 ASN ASN D . n A 1 291 PHE 291 294 294 PHE PHE D . n A 1 292 VAL 292 295 295 VAL VAL D . n A 1 293 ARG 293 296 296 ARG ARG D . n A 1 294 TRP 294 297 297 TRP TRP D . n A 1 295 ASN 295 298 298 ASN ASN D . n A 1 296 LEU 296 299 299 LEU LEU D . n A 1 297 TYR 297 300 300 TYR TYR D . n A 1 298 THR 298 301 301 THR THR D . n A 1 299 ASP 299 302 302 ASP ASP D . n A 1 300 PRO 300 303 303 PRO PRO D . n A 1 301 VAL 301 304 304 VAL VAL D . n A 1 302 SER 302 305 305 SER SER D . n A 1 303 GLY 303 306 306 GLY GLY D . n A 1 304 SER 304 307 307 SER SER D . n A 1 305 GLY 305 308 308 GLY GLY D . n A 1 306 PHE 306 309 309 PHE PHE D . n A 1 307 VAL 307 310 310 VAL VAL D . n A 1 308 GLU 308 311 311 GLU GLU D . n A 1 309 SER 309 312 312 SER SER D . n A 1 310 TRP 310 313 313 TRP TRP D . n A 1 311 THR 311 314 314 THR THR D . n A 1 312 VAL 312 315 315 VAL VAL D . n A 1 313 PHE 313 316 316 PHE PHE D . n A 1 314 TYR 314 317 317 TYR TYR D . n A 1 315 TRP 315 318 318 TRP TRP D . n A 1 316 ALA 316 319 319 ALA ALA D . n A 1 317 TRP 317 320 320 TRP TRP D . n A 1 318 TRP 318 321 321 TRP TRP D . n A 1 319 ILE 319 322 322 ILE ILE D . n A 1 320 VAL 320 323 323 VAL VAL D . n A 1 321 TYR 321 324 324 TYR TYR D . n A 1 322 THR 322 325 325 THR THR D . n A 1 323 PRO 323 326 326 PRO PRO D . n A 1 324 PHE 324 327 327 PHE PHE D . n A 1 325 MET 325 328 328 MET MET D . n A 1 326 GLY 326 329 329 GLY GLY D . n A 1 327 LEU 327 330 330 LEU LEU D . n A 1 328 PHE 328 331 331 PHE PHE D . n A 1 329 ILE 329 332 332 ILE ILE D . n A 1 330 ALA 330 333 333 ALA ALA D . n A 1 331 LYS 331 334 334 LYS LYS D . n A 1 332 ILE 332 335 335 ILE ILE D . n A 1 333 SER 333 336 336 SER SER D . n A 1 334 ARG 334 337 337 ARG ARG D . n A 1 335 GLY 335 338 338 GLY GLY D . n A 1 336 ARG 336 339 339 ARG ARG D . n A 1 337 THR 337 340 340 THR THR D . n A 1 338 ILE 338 341 341 ILE ILE D . n A 1 339 ARG 339 342 342 ARG ARG D . n A 1 340 GLN 340 343 343 GLN GLN D . n A 1 341 VAL 341 344 344 VAL VAL D . n A 1 342 ILE 342 345 345 ILE ILE D . n A 1 343 LEU 343 346 346 LEU LEU D . n A 1 344 GLY 344 347 347 GLY GLY D . n A 1 345 GLY 345 348 348 GLY GLY D . n A 1 346 ILE 346 349 349 ILE ILE D . n A 1 347 ALA 347 350 350 ALA ALA D . n A 1 348 TRP 348 351 351 TRP TRP D . n A 1 349 GLY 349 352 352 GLY GLY D . n A 1 350 THR 350 353 353 THR THR D . n A 1 351 LEU 351 354 354 LEU LEU D . n A 1 352 GLY 352 355 355 GLY GLY D . n A 1 353 CYS 353 356 356 CYS CYS D . n A 1 354 ALA 354 357 357 ALA ALA D . n A 1 355 ALA 355 358 358 ALA ALA D . n A 1 356 TYR 356 359 359 TYR TYR D . n A 1 357 PHE 357 360 360 PHE PHE D . n A 1 358 SER 358 361 361 SER SER D . n A 1 359 ILE 359 362 362 ILE ILE D . n A 1 360 LEU 360 363 363 LEU LEU D . n A 1 361 GLY 361 364 364 GLY GLY D . n A 1 362 ASN 362 365 365 ASN ASN D . n A 1 363 TYR 363 366 366 TYR TYR D . n A 1 364 ALA 364 367 367 ALA ALA D . n A 1 365 MET 365 368 368 MET MET D . n A 1 366 HIS 366 369 369 HIS HIS D . n A 1 367 LEU 367 370 370 LEU LEU D . n A 1 368 GLU 368 371 371 GLU GLU D . n A 1 369 LEU 369 372 372 LEU LEU D . n A 1 370 THR 370 373 373 THR THR D . n A 1 371 LYS 371 374 374 LYS LYS D . n A 1 372 GLU 372 375 375 GLU GLU D . n A 1 373 LEU 373 376 376 LEU LEU D . n A 1 374 SER 374 377 377 SER SER D . n A 1 375 VAL 375 378 378 VAL VAL D . n A 1 376 THR 376 379 379 THR THR D . n A 1 377 GLY 377 380 380 GLY GLY D . n A 1 378 LEU 378 381 381 LEU LEU D . n A 1 379 LEU 379 382 382 LEU LEU D . n A 1 380 GLU 380 383 383 GLU GLU D . n A 1 381 GLN 381 384 384 GLN GLN D . n A 1 382 ILE 382 385 385 ILE ILE D . n A 1 383 GLY 383 386 386 GLY GLY D . n A 1 384 ALA 384 387 387 ALA ALA D . n A 1 385 PRO 385 388 388 PRO PRO D . n A 1 386 ALA 386 389 389 ALA ALA D . n A 1 387 THR 387 390 390 THR THR D . n A 1 388 ILE 388 391 391 ILE ILE D . n A 1 389 MET 389 392 392 MET MET D . n A 1 390 GLU 390 393 393 GLU GLU D . n A 1 391 VAL 391 394 394 VAL VAL D . n A 1 392 ILE 392 395 395 ILE ILE D . n A 1 393 GLY 393 396 396 GLY GLY D . n A 1 394 THR 394 397 397 THR THR D . n A 1 395 LEU 395 398 398 LEU LEU D . n A 1 396 PRO 396 399 399 PRO PRO D . n A 1 397 LEU 397 400 400 LEU LEU D . n A 1 398 GLY 398 401 401 GLY GLY D . n A 1 399 SER 399 402 402 SER SER D . n A 1 400 VAL 400 403 403 VAL VAL D . n A 1 401 VAL 401 404 404 VAL VAL D . n A 1 402 VAL 402 405 405 VAL VAL D . n A 1 403 ILE 403 406 406 ILE ILE D . n A 1 404 VAL 404 407 407 VAL VAL D . n A 1 405 PHE 405 408 408 PHE PHE D . n A 1 406 SER 406 409 409 SER SER D . n A 1 407 PHE 407 410 410 PHE PHE D . n A 1 408 ILE 408 411 411 ILE ILE D . n A 1 409 ALA 409 412 412 ALA ALA D . n A 1 410 LEU 410 413 413 LEU LEU D . n A 1 411 ILE 411 414 414 ILE ILE D . n A 1 412 PHE 412 415 415 PHE PHE D . n A 1 413 LEU 413 416 416 LEU LEU D . n A 1 414 ALA 414 417 417 ALA ALA D . n A 1 415 THR 415 418 418 THR THR D . n A 1 416 THR 416 419 419 THR THR D . n A 1 417 PHE 417 420 420 PHE PHE D . n A 1 418 ASP 418 421 421 ASP ASP D . n A 1 419 SER 419 422 422 SER SER D . n A 1 420 ALA 420 423 423 ALA ALA D . n A 1 421 ALA 421 424 424 ALA ALA D . n A 1 422 TYR 422 425 425 TYR TYR D . n A 1 423 MET 423 426 426 MET MET D . n A 1 424 MET 424 427 427 MET MET D . n A 1 425 ALA 425 428 428 ALA ALA D . n A 1 426 SER 426 429 429 SER SER D . n A 1 427 SER 427 430 430 SER SER D . n A 1 428 THR 428 431 431 THR THR D . n A 1 429 THR 429 432 432 THR THR D . n A 1 430 PRO 430 433 433 PRO PRO D . n A 1 431 THR 431 434 434 THR THR D . n A 1 432 LEU 432 435 435 LEU LEU D . n A 1 433 GLY 433 436 436 GLY GLY D . n A 1 434 LEU 434 437 437 LEU LEU D . n A 1 435 ASN 435 438 438 ASN ASN D . n A 1 436 GLU 436 439 439 GLU GLU D . n A 1 437 GLU 437 440 440 GLU GLU D . n A 1 438 PRO 438 441 441 PRO PRO D . n A 1 439 ALA 439 442 442 ALA ALA D . n A 1 440 LYS 440 443 443 LYS LYS D . n A 1 441 TRP 441 444 444 TRP TRP D . n A 1 442 ASN 442 445 445 ASN ASN D . n A 1 443 ARG 443 446 446 ARG ARG D . n A 1 444 LEU 444 447 447 LEU LEU D . n A 1 445 PHE 445 448 448 PHE PHE D . n A 1 446 TRP 446 449 449 TRP TRP D . n A 1 447 ALA 447 450 450 ALA ALA D . n A 1 448 LEU 448 451 451 LEU LEU D . n A 1 449 THR 449 452 452 THR THR D . n A 1 450 LEU 450 453 453 LEU LEU D . n A 1 451 PHE 451 454 454 PHE PHE D . n A 1 452 ILE 452 455 455 ILE ILE D . n A 1 453 LEU 453 456 456 LEU LEU D . n A 1 454 PRO 454 457 457 PRO PRO D . n A 1 455 GLY 455 458 458 GLY GLY D . n A 1 456 THR 456 459 459 THR THR D . n A 1 457 LEU 457 460 460 LEU LEU D . n A 1 458 MET 458 461 461 MET MET D . n A 1 459 VAL 459 462 462 VAL VAL D . n A 1 460 LEU 460 463 463 LEU LEU D . n A 1 461 GLY 461 464 464 GLY GLY D . n A 1 462 GLY 462 465 465 GLY GLY D . n A 1 463 ASP 463 466 466 ASP ASP D . n A 1 464 LEU 464 467 467 LEU LEU D . n A 1 465 LYS 465 468 468 LYS LYS D . n A 1 466 THR 466 469 469 THR THR D . n A 1 467 LEU 467 470 470 LEU LEU D . n A 1 468 GLN 468 471 471 GLN GLN D . n A 1 469 THR 469 472 472 THR THR D . n A 1 470 ALA 470 473 473 ALA ALA D . n A 1 471 SER 471 474 474 SER SER D . n A 1 472 ILE 472 475 475 ILE ILE D . n A 1 473 LEU 473 476 476 LEU LEU D . n A 1 474 THR 474 477 477 THR THR D . n A 1 475 ALA 475 478 478 ALA ALA D . n A 1 476 ILE 476 479 479 ILE ILE D . n A 1 477 PRO 477 480 480 PRO PRO D . n A 1 478 PHE 478 481 481 PHE PHE D . n A 1 479 ILE 479 482 482 ILE ILE D . n A 1 480 PHE 480 483 483 PHE PHE D . n A 1 481 VAL 481 484 484 VAL VAL D . n A 1 482 ILE 482 485 485 ILE ILE D . n A 1 483 MET 483 486 486 MET MET D . n A 1 484 LEU 484 487 487 LEU LEU D . n A 1 485 LEU 485 488 488 LEU LEU D . n A 1 486 VAL 486 489 489 VAL VAL D . n A 1 487 VAL 487 490 490 VAL VAL D . n A 1 488 ALA 488 491 491 ALA ALA D . n A 1 489 LEU 489 492 492 LEU LEU D . n A 1 490 MET 490 493 493 MET MET D . n A 1 491 LYS 491 494 494 LYS LYS D . n A 1 492 MET 492 495 495 MET MET D . n A 1 493 LEU 493 496 496 LEU LEU D . n A 1 494 LYS 494 497 497 LYS LYS D . n A 1 495 THR 495 498 498 THR THR D . n A 1 496 GLY 496 499 499 GLY GLY D . n A 1 497 GLU 497 500 500 GLU GLU D . n A 1 498 HIS 498 501 501 HIS HIS D . n A 1 499 PHE 499 502 502 PHE PHE D . n A 1 500 ASN 500 503 503 ASN ASN D . n A 1 501 GLN 501 504 504 GLN GLN D . n A 1 502 ASP 502 505 505 ASP ASP D . n # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 DQY ? ? DQY ? ? 'SUBJECT OF INVESTIGATION' ? 2 NA ? ? NA ? ? 'SUBJECT OF INVESTIGATION' ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DQY 1 601 601 DQY DQY D . C 3 NA 1 602 603 NA NA D . D 3 NA 1 603 1 NA NA D . E 4 HOH 1 701 2 HOH HOH D . E 4 HOH 2 702 1 HOH HOH D . E 4 HOH 3 703 3 HOH HOH D . # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 21FI _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 21FI _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 21FI _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 21FI _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.52 _refine.ls_d_res_low ? _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work ? _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.correlation_coeff_I_to_Fcsqd_work ? _refine.correlation_coeff_I_to_Fcsqd_free ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'REAL-SPACE (WEIGHTED MAP SUM AT ATOM CENTERS)' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_Zscore _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.004 ? 4000 ? f_bond_d ? ? ? 'ELECTRON MICROSCOPY' ? 0.633 ? 5454 ? f_angle_d ? ? ? 'ELECTRON MICROSCOPY' ? 4.693 ? 530 ? f_dihedral_angle_d ? ? ? 'ELECTRON MICROSCOPY' ? 0.079 ? 638 ? f_chiral_restr ? ? ? 'ELECTRON MICROSCOPY' ? 0.006 ? 653 ? f_plane_restr ? ? ? # _struct.entry_id 21FI _struct.title 'Cryo-EM structure of DddT in closed DMSP-bound conformation' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 21FI _struct_keywords.text 'Trimer, Psychrobacter sp. D2, Dimethylsulfoniopropionate transporter, Closed DMSP-bound conformation, TRANSPORT PROTEIN' _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 21FI _struct_ref.pdbx_db_accession 21FI _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 21FI _struct_ref_seq.pdbx_strand_id D _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 502 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 21FI _struct_ref_seq.db_align_beg 4 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 505 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 4 _struct_ref_seq.pdbx_auth_seq_align_end 505 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 'complete point assembly' ? trimeric 3 2 'point asymmetric unit' ? monomeric 1 3 'point asymmetric unit, std point frame' ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 '(1-3)' A,B,C,D,E 2 1 A,B,C,D,E 3 P A,B,C,D,E # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] P 'transform to point frame' ? ? -0.49098187 0.87116979 0.00000000 -55.31734 -0.87116979 -0.49098187 0.00000000 198.19307 0.00000000 0.00000000 1.00000000 -155.68775 1 'identity operation' 1_555 x,y,z 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 1.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 2 'point symmetry operation' ? ? -0.50000000 -0.86602540 0.00000000 344.25670 0.86602540 -0.50000000 0.00000000 92.24330 0.00000000 0.00000000 1.00000000 0.00000 3 'point symmetry operation' ? ? -0.50000000 0.86602540 0.00000000 92.24331 -0.86602540 -0.50000000 0.00000000 344.25670 0.00000000 0.00000000 1.00000000 0.00000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 TRP A 5 ? TYR A 25 ? TRP D 8 TYR D 28 1 ? 21 HELX_P HELX_P2 AA2 TYR A 25 ? SER A 65 ? TYR D 28 SER D 68 1 ? 41 HELX_P HELX_P3 AA3 GLU A 66 ? ILE A 70 ? GLU D 69 ILE D 73 5 ? 5 HELX_P HELX_P4 AA4 SER A 82 ? VAL A 95 ? SER D 85 VAL D 98 1 ? 14 HELX_P HELX_P5 AA5 SER A 97 ? ALA A 113 ? SER D 100 ALA D 116 1 ? 17 HELX_P HELX_P6 AA6 SER A 122 ? HIS A 136 ? SER D 125 HIS D 139 1 ? 15 HELX_P HELX_P7 AA7 GLY A 138 ? ILE A 158 ? GLY D 141 ILE D 161 1 ? 21 HELX_P HELX_P8 AA8 ARG A 165 ? CYS A 170 ? ARG D 168 CYS D 173 1 ? 6 HELX_P HELX_P9 AA9 CYS A 170 ? GLY A 175 ? CYS D 173 GLY D 178 1 ? 6 HELX_P HELX_P10 AB1 LYS A 176 ? ASP A 179 ? LYS D 179 ASP D 182 5 ? 4 HELX_P HELX_P11 AB2 GLY A 180 ? THR A 217 ? GLY D 183 THR D 220 1 ? 38 HELX_P HELX_P12 AB3 SER A 222 ? GLY A 244 ? SER D 225 GLY D 247 1 ? 23 HELX_P HELX_P13 AB4 ARG A 247 ? GLY A 271 ? ARG D 250 GLY D 274 1 ? 25 HELX_P HELX_P14 AB5 PRO A 272 ? ASN A 290 ? PRO D 275 ASN D 293 1 ? 19 HELX_P HELX_P15 AB6 ASN A 290 ? LEU A 296 ? ASN D 293 LEU D 299 1 ? 7 HELX_P HELX_P16 AB7 GLY A 305 ? TRP A 310 ? GLY D 308 TRP D 313 1 ? 6 HELX_P HELX_P17 AB8 TRP A 310 ? VAL A 320 ? TRP D 313 VAL D 323 1 ? 11 HELX_P HELX_P18 AB9 TYR A 321 ? ILE A 332 ? TYR D 324 ILE D 335 1 ? 12 HELX_P HELX_P19 AC1 THR A 337 ? THR A 370 ? THR D 340 THR D 373 1 ? 34 HELX_P HELX_P20 AC2 SER A 374 ? GLY A 383 ? SER D 377 GLY D 386 1 ? 10 HELX_P HELX_P21 AC3 GLY A 383 ? GLY A 393 ? GLY D 386 GLY D 396 1 ? 11 HELX_P HELX_P22 AC4 LEU A 397 ? THR A 429 ? LEU D 400 THR D 432 1 ? 33 HELX_P HELX_P23 AC5 ALA A 439 ? PHE A 451 ? ALA D 442 PHE D 454 1 ? 13 HELX_P HELX_P24 AC6 PHE A 451 ? LEU A 460 ? PHE D 454 LEU D 463 1 ? 10 HELX_P HELX_P25 AC7 ASP A 463 ? ILE A 476 ? ASP D 466 ILE D 479 1 ? 14 HELX_P HELX_P26 AC8 PRO A 477 ? THR A 495 ? PRO D 480 THR D 498 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A MET 89 O ? ? ? 1_555 C NA . NA ? ? D MET 92 D NA 602 1_555 ? ? ? ? ? ? ? 3.057 ? ? metalc2 metalc ? ? A CYS 92 O ? ? ? 1_555 D NA . NA ? ? D CYS 95 D NA 603 1_555 ? ? ? ? ? ? ? 2.939 ? ? metalc3 metalc ? ? A VAL 95 O ? ? ? 1_555 D NA . NA ? ? D VAL 98 D NA 603 1_555 ? ? ? ? ? ? ? 2.994 ? ? metalc4 metalc ? ? A PHE 412 O ? ? ? 1_555 D NA . NA ? ? D PHE 415 D NA 603 1_555 ? ? ? ? ? ? ? 2.695 ? ? metalc5 metalc ? ? A THR 415 OG1 ? ? ? 1_555 D NA . NA ? ? D THR 418 D NA 603 1_555 ? ? ? ? ? ? ? 2.985 ? ? metalc6 metalc ? ? A THR 416 OG1 ? ? ? 1_555 D NA . NA ? ? D THR 419 D NA 603 1_555 ? ? ? ? ? ? ? 2.685 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A CYS 92 ? D CYS 95 ? 1_555 NA ? D NA . ? D NA 603 ? 1_555 O ? A VAL 95 ? D VAL 98 ? 1_555 123.7 ? 2 O ? A CYS 92 ? D CYS 95 ? 1_555 NA ? D NA . ? D NA 603 ? 1_555 O ? A PHE 412 ? D PHE 415 ? 1_555 129.6 ? 3 O ? A VAL 95 ? D VAL 98 ? 1_555 NA ? D NA . ? D NA 603 ? 1_555 O ? A PHE 412 ? D PHE 415 ? 1_555 100.0 ? 4 O ? A CYS 92 ? D CYS 95 ? 1_555 NA ? D NA . ? D NA 603 ? 1_555 OG1 ? A THR 415 ? D THR 418 ? 1_555 61.7 ? 5 O ? A VAL 95 ? D VAL 98 ? 1_555 NA ? D NA . ? D NA 603 ? 1_555 OG1 ? A THR 415 ? D THR 418 ? 1_555 136.5 ? 6 O ? A PHE 412 ? D PHE 415 ? 1_555 NA ? D NA . ? D NA 603 ? 1_555 OG1 ? A THR 415 ? D THR 418 ? 1_555 69.6 ? 7 O ? A CYS 92 ? D CYS 95 ? 1_555 NA ? D NA . ? D NA 603 ? 1_555 OG1 ? A THR 416 ? D THR 419 ? 1_555 92.0 ? 8 O ? A VAL 95 ? D VAL 98 ? 1_555 NA ? D NA . ? D NA 603 ? 1_555 OG1 ? A THR 416 ? D THR 419 ? 1_555 111.2 ? 9 O ? A PHE 412 ? D PHE 415 ? 1_555 NA ? D NA . ? D NA 603 ? 1_555 OG1 ? A THR 416 ? D THR 419 ? 1_555 94.4 ? 10 OG1 ? A THR 415 ? D THR 418 ? 1_555 NA ? D NA . ? D NA 603 ? 1_555 OG1 ? A THR 416 ? D THR 419 ? 1_555 111.7 ? # _pdbx_entry_details.entry_id 21FI _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA D 99 ? ? -76.79 -154.49 2 1 ARG D 250 ? ? -106.69 -76.23 3 1 LYS D 374 ? ? 73.42 31.00 4 1 ASN D 503 ? ? -90.14 50.24 # _pdbx_point_symmetry.entry_id 21FI _pdbx_point_symmetry.Schoenflies_symbol C _pdbx_point_symmetry.circular_symmetry 3 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 21FI _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 21FI _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 2.52 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 446735 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 8.00 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'DddT in closed DMSP-bound conformation' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1 # _em_imaging.entry_id 21FI _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'SPOT SCAN' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 800 _em_imaging.nominal_defocus_max 1600 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? _em_imaging.objective_aperture ? _em_imaging.microscope_serial_number ? _em_imaging.microscope_version ? # _em_vitrification.entry_id 21FI _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 21FI _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DQY S S N N 88 DQY C1 C N N 89 DQY O1 O N N 90 DQY C2 C N N 91 DQY O2 O N N 92 DQY C3 C N N 93 DQY CM1 C N N 94 DQY CM2 C N N 95 DQY H2 H N N 96 DQY H2A H N N 97 DQY HO2 H N N 98 DQY H3 H N N 99 DQY H3A H N N 100 DQY HM1 H N N 101 DQY HM1A H N N 102 DQY HM1B H N N 103 DQY HM2 H N N 104 DQY HM2A H N N 105 DQY HM2B H N N 106 DQY HS H N N 107 GLN N N N N 108 GLN CA C N S 109 GLN C C N N 110 GLN O O N N 111 GLN CB C N N 112 GLN CG C N N 113 GLN CD C N N 114 GLN OE1 O N N 115 GLN NE2 N N N 116 GLN OXT O N N 117 GLN H H N N 118 GLN H2 H N N 119 GLN HA H N N 120 GLN HB2 H N N 121 GLN HB3 H N N 122 GLN HG2 H N N 123 GLN HG3 H N N 124 GLN HE21 H N N 125 GLN HE22 H N N 126 GLN HXT H N N 127 GLU N N N N 128 GLU CA C N S 129 GLU C C N N 130 GLU O O N N 131 GLU CB C N N 132 GLU CG C N N 133 GLU CD C N N 134 GLU OE1 O N N 135 GLU OE2 O N N 136 GLU OXT O N N 137 GLU H H N N 138 GLU H2 H N N 139 GLU HA H N N 140 GLU HB2 H N N 141 GLU HB3 H N N 142 GLU HG2 H N N 143 GLU HG3 H N N 144 GLU HE2 H N N 145 GLU HXT H N N 146 GLY N N N N 147 GLY CA C N N 148 GLY C C N N 149 GLY O O N N 150 GLY OXT O N N 151 GLY H H N N 152 GLY H2 H N N 153 GLY HA2 H N N 154 GLY HA3 H N N 155 GLY HXT H N N 156 HIS N N N N 157 HIS CA C N S 158 HIS C C N N 159 HIS O O N N 160 HIS CB C N N 161 HIS CG C Y N 162 HIS ND1 N Y N 163 HIS CD2 C Y N 164 HIS CE1 C Y N 165 HIS NE2 N Y N 166 HIS OXT O N N 167 HIS H H N N 168 HIS H2 H N N 169 HIS HA H N N 170 HIS HB2 H N N 171 HIS HB3 H N N 172 HIS HD1 H N N 173 HIS HD2 H N N 174 HIS HE1 H N N 175 HIS HE2 H N N 176 HIS HXT H N N 177 HOH O O N N 178 HOH H1 H N N 179 HOH H2 H N N 180 ILE N N N N 181 ILE CA C N S 182 ILE C C N N 183 ILE O O N N 184 ILE CB C N S 185 ILE CG1 C N N 186 ILE CG2 C N N 187 ILE CD1 C N N 188 ILE OXT O N N 189 ILE H H N N 190 ILE H2 H N N 191 ILE HA H N N 192 ILE HB H N N 193 ILE HG12 H N N 194 ILE HG13 H N N 195 ILE HG21 H N N 196 ILE HG22 H N N 197 ILE HG23 H N N 198 ILE HD11 H N N 199 ILE HD12 H N N 200 ILE HD13 H N N 201 ILE HXT H N N 202 LEU N N N N 203 LEU CA C N S 204 LEU C C N N 205 LEU O O N N 206 LEU CB C N N 207 LEU CG C N N 208 LEU CD1 C N N 209 LEU CD2 C N N 210 LEU OXT O N N 211 LEU H H N N 212 LEU H2 H N N 213 LEU HA H N N 214 LEU HB2 H N N 215 LEU HB3 H N N 216 LEU HG H N N 217 LEU HD11 H N N 218 LEU HD12 H N N 219 LEU HD13 H N N 220 LEU HD21 H N N 221 LEU HD22 H N N 222 LEU HD23 H N N 223 LEU HXT H N N 224 LYS N N N N 225 LYS CA C N S 226 LYS C C N N 227 LYS O O N N 228 LYS CB C N N 229 LYS CG C N N 230 LYS CD C N N 231 LYS CE C N N 232 LYS NZ N N N 233 LYS OXT O N N 234 LYS H H N N 235 LYS H2 H N N 236 LYS HA H N N 237 LYS HB2 H N N 238 LYS HB3 H N N 239 LYS HG2 H N N 240 LYS HG3 H N N 241 LYS HD2 H N N 242 LYS HD3 H N N 243 LYS HE2 H N N 244 LYS HE3 H N N 245 LYS HZ1 H N N 246 LYS HZ2 H N N 247 LYS HZ3 H N N 248 LYS HXT H N N 249 MET N N N N 250 MET CA C N S 251 MET C C N N 252 MET O O N N 253 MET CB C N N 254 MET CG C N N 255 MET SD S N N 256 MET CE C N N 257 MET OXT O N N 258 MET H H N N 259 MET H2 H N N 260 MET HA H N N 261 MET HB2 H N N 262 MET HB3 H N N 263 MET HG2 H N N 264 MET HG3 H N N 265 MET HE1 H N N 266 MET HE2 H N N 267 MET HE3 H N N 268 MET HXT H N N 269 NA NA NA N N 270 PHE N N N N 271 PHE CA C N S 272 PHE C C N N 273 PHE O O N N 274 PHE CB C N N 275 PHE CG C Y N 276 PHE CD1 C Y N 277 PHE CD2 C Y N 278 PHE CE1 C Y N 279 PHE CE2 C Y N 280 PHE CZ C Y N 281 PHE OXT O N N 282 PHE H H N N 283 PHE H2 H N N 284 PHE HA H N N 285 PHE HB2 H N N 286 PHE HB3 H N N 287 PHE HD1 H N N 288 PHE HD2 H N N 289 PHE HE1 H N N 290 PHE HE2 H N N 291 PHE HZ H N N 292 PHE HXT H N N 293 PRO N N N N 294 PRO CA C N S 295 PRO C C N N 296 PRO O O N N 297 PRO CB C N N 298 PRO CG C N N 299 PRO CD C N N 300 PRO OXT O N N 301 PRO H H N N 302 PRO HA H N N 303 PRO HB2 H N N 304 PRO HB3 H N N 305 PRO HG2 H N N 306 PRO HG3 H N N 307 PRO HD2 H N N 308 PRO HD3 H N N 309 PRO HXT H N N 310 SER N N N N 311 SER CA C N S 312 SER C C N N 313 SER O O N N 314 SER CB C N N 315 SER OG O N N 316 SER OXT O N N 317 SER H H N N 318 SER H2 H N N 319 SER HA H N N 320 SER HB2 H N N 321 SER HB3 H N N 322 SER HG H N N 323 SER HXT H N N 324 THR N N N N 325 THR CA C N S 326 THR C C N N 327 THR O O N N 328 THR CB C N R 329 THR OG1 O N N 330 THR CG2 C N N 331 THR OXT O N N 332 THR H H N N 333 THR H2 H N N 334 THR HA H N N 335 THR HB H N N 336 THR HG1 H N N 337 THR HG21 H N N 338 THR HG22 H N N 339 THR HG23 H N N 340 THR HXT H N N 341 TRP N N N N 342 TRP CA C N S 343 TRP C C N N 344 TRP O O N N 345 TRP CB C N N 346 TRP CG C Y N 347 TRP CD1 C Y N 348 TRP CD2 C Y N 349 TRP NE1 N Y N 350 TRP CE2 C Y N 351 TRP CE3 C Y N 352 TRP CZ2 C Y N 353 TRP CZ3 C Y N 354 TRP CH2 C Y N 355 TRP OXT O N N 356 TRP H H N N 357 TRP H2 H N N 358 TRP HA H N N 359 TRP HB2 H N N 360 TRP HB3 H N N 361 TRP HD1 H N N 362 TRP HE1 H N N 363 TRP HE3 H N N 364 TRP HZ2 H N N 365 TRP HZ3 H N N 366 TRP HH2 H N N 367 TRP HXT H N N 368 TYR N N N N 369 TYR CA C N S 370 TYR C C N N 371 TYR O O N N 372 TYR CB C N N 373 TYR CG C Y N 374 TYR CD1 C Y N 375 TYR CD2 C Y N 376 TYR CE1 C Y N 377 TYR CE2 C Y N 378 TYR CZ C Y N 379 TYR OH O N N 380 TYR OXT O N N 381 TYR H H N N 382 TYR H2 H N N 383 TYR HA H N N 384 TYR HB2 H N N 385 TYR HB3 H N N 386 TYR HD1 H N N 387 TYR HD2 H N N 388 TYR HE1 H N N 389 TYR HE2 H N N 390 TYR HH H N N 391 TYR HXT H N N 392 VAL N N N N 393 VAL CA C N S 394 VAL C C N N 395 VAL O O N N 396 VAL CB C N N 397 VAL CG1 C N N 398 VAL CG2 C N N 399 VAL OXT O N N 400 VAL H H N N 401 VAL H2 H N N 402 VAL HA H N N 403 VAL HB H N N 404 VAL HG11 H N N 405 VAL HG12 H N N 406 VAL HG13 H N N 407 VAL HG21 H N N 408 VAL HG22 H N N 409 VAL HG23 H N N 410 VAL HXT H N N 411 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DQY CM1 S sing N N 83 DQY CM2 S sing N N 84 DQY S C3 sing N N 85 DQY C2 C1 sing N N 86 DQY C1 O1 doub N N 87 DQY C1 O2 sing N N 88 DQY C3 C2 sing N N 89 DQY C2 H2 sing N N 90 DQY C2 H2A sing N N 91 DQY O2 HO2 sing N N 92 DQY C3 H3 sing N N 93 DQY C3 H3A sing N N 94 DQY CM1 HM1 sing N N 95 DQY CM1 HM1A sing N N 96 DQY CM1 HM1B sing N N 97 DQY CM2 HM2 sing N N 98 DQY CM2 HM2A sing N N 99 DQY CM2 HM2B sing N N 100 DQY S HS sing N N 101 GLN N CA sing N N 102 GLN N H sing N N 103 GLN N H2 sing N N 104 GLN CA C sing N N 105 GLN CA CB sing N N 106 GLN CA HA sing N N 107 GLN C O doub N N 108 GLN C OXT sing N N 109 GLN CB CG sing N N 110 GLN CB HB2 sing N N 111 GLN CB HB3 sing N N 112 GLN CG CD sing N N 113 GLN CG HG2 sing N N 114 GLN CG HG3 sing N N 115 GLN CD OE1 doub N N 116 GLN CD NE2 sing N N 117 GLN NE2 HE21 sing N N 118 GLN NE2 HE22 sing N N 119 GLN OXT HXT sing N N 120 GLU N CA sing N N 121 GLU N H sing N N 122 GLU N H2 sing N N 123 GLU CA C sing N N 124 GLU CA CB sing N N 125 GLU CA HA sing N N 126 GLU C O doub N N 127 GLU C OXT sing N N 128 GLU CB CG sing N N 129 GLU CB HB2 sing N N 130 GLU CB HB3 sing N N 131 GLU CG CD sing N N 132 GLU CG HG2 sing N N 133 GLU CG HG3 sing N N 134 GLU CD OE1 doub N N 135 GLU CD OE2 sing N N 136 GLU OE2 HE2 sing N N 137 GLU OXT HXT sing N N 138 GLY N CA sing N N 139 GLY N H sing N N 140 GLY N H2 sing N N 141 GLY CA C sing N N 142 GLY CA HA2 sing N N 143 GLY CA HA3 sing N N 144 GLY C O doub N N 145 GLY C OXT sing N N 146 GLY OXT HXT sing N N 147 HIS N CA sing N N 148 HIS N H sing N N 149 HIS N H2 sing N N 150 HIS CA C sing N N 151 HIS CA CB sing N N 152 HIS CA HA sing N N 153 HIS C O doub N N 154 HIS C OXT sing N N 155 HIS CB CG sing N N 156 HIS CB HB2 sing N N 157 HIS CB HB3 sing N N 158 HIS CG ND1 sing Y N 159 HIS CG CD2 doub Y N 160 HIS ND1 CE1 doub Y N 161 HIS ND1 HD1 sing N N 162 HIS CD2 NE2 sing Y N 163 HIS CD2 HD2 sing N N 164 HIS CE1 NE2 sing Y N 165 HIS CE1 HE1 sing N N 166 HIS NE2 HE2 sing N N 167 HIS OXT HXT sing N N 168 HOH O H1 sing N N 169 HOH O H2 sing N N 170 ILE N CA sing N N 171 ILE N H sing N N 172 ILE N H2 sing N N 173 ILE CA C sing N N 174 ILE CA CB sing N N 175 ILE CA HA sing N N 176 ILE C O doub N N 177 ILE C OXT sing N N 178 ILE CB CG1 sing N N 179 ILE CB CG2 sing N N 180 ILE CB HB sing N N 181 ILE CG1 CD1 sing N N 182 ILE CG1 HG12 sing N N 183 ILE CG1 HG13 sing N N 184 ILE CG2 HG21 sing N N 185 ILE CG2 HG22 sing N N 186 ILE CG2 HG23 sing N N 187 ILE CD1 HD11 sing N N 188 ILE CD1 HD12 sing N N 189 ILE CD1 HD13 sing N N 190 ILE OXT HXT sing N N 191 LEU N CA sing N N 192 LEU N H sing N N 193 LEU N H2 sing N N 194 LEU CA C sing N N 195 LEU CA CB sing N N 196 LEU CA HA sing N N 197 LEU C O doub N N 198 LEU C OXT sing N N 199 LEU CB CG sing N N 200 LEU CB HB2 sing N N 201 LEU CB HB3 sing N N 202 LEU CG CD1 sing N N 203 LEU CG CD2 sing N N 204 LEU CG HG sing N N 205 LEU CD1 HD11 sing N N 206 LEU CD1 HD12 sing N N 207 LEU CD1 HD13 sing N N 208 LEU CD2 HD21 sing N N 209 LEU CD2 HD22 sing N N 210 LEU CD2 HD23 sing N N 211 LEU OXT HXT sing N N 212 LYS N CA sing N N 213 LYS N H sing N N 214 LYS N H2 sing N N 215 LYS CA C sing N N 216 LYS CA CB sing N N 217 LYS CA HA sing N N 218 LYS C O doub N N 219 LYS C OXT sing N N 220 LYS CB CG sing N N 221 LYS CB HB2 sing N N 222 LYS CB HB3 sing N N 223 LYS CG CD sing N N 224 LYS CG HG2 sing N N 225 LYS CG HG3 sing N N 226 LYS CD CE sing N N 227 LYS CD HD2 sing N N 228 LYS CD HD3 sing N N 229 LYS CE NZ sing N N 230 LYS CE HE2 sing N N 231 LYS CE HE3 sing N N 232 LYS NZ HZ1 sing N N 233 LYS NZ HZ2 sing N N 234 LYS NZ HZ3 sing N N 235 LYS OXT HXT sing N N 236 MET N CA sing N N 237 MET N H sing N N 238 MET N H2 sing N N 239 MET CA C sing N N 240 MET CA CB sing N N 241 MET CA HA sing N N 242 MET C O doub N N 243 MET C OXT sing N N 244 MET CB CG sing N N 245 MET CB HB2 sing N N 246 MET CB HB3 sing N N 247 MET CG SD sing N N 248 MET CG HG2 sing N N 249 MET CG HG3 sing N N 250 MET SD CE sing N N 251 MET CE HE1 sing N N 252 MET CE HE2 sing N N 253 MET CE HE3 sing N N 254 MET OXT HXT sing N N 255 PHE N CA sing N N 256 PHE N H sing N N 257 PHE N H2 sing N N 258 PHE CA C sing N N 259 PHE CA CB sing N N 260 PHE CA HA sing N N 261 PHE C O doub N N 262 PHE C OXT sing N N 263 PHE CB CG sing N N 264 PHE CB HB2 sing N N 265 PHE CB HB3 sing N N 266 PHE CG CD1 doub Y N 267 PHE CG CD2 sing Y N 268 PHE CD1 CE1 sing Y N 269 PHE CD1 HD1 sing N N 270 PHE CD2 CE2 doub Y N 271 PHE CD2 HD2 sing N N 272 PHE CE1 CZ doub Y N 273 PHE CE1 HE1 sing N N 274 PHE CE2 CZ sing Y N 275 PHE CE2 HE2 sing N N 276 PHE CZ HZ sing N N 277 PHE OXT HXT sing N N 278 PRO N CA sing N N 279 PRO N CD sing N N 280 PRO N H sing N N 281 PRO CA C sing N N 282 PRO CA CB sing N N 283 PRO CA HA sing N N 284 PRO C O doub N N 285 PRO C OXT sing N N 286 PRO CB CG sing N N 287 PRO CB HB2 sing N N 288 PRO CB HB3 sing N N 289 PRO CG CD sing N N 290 PRO CG HG2 sing N N 291 PRO CG HG3 sing N N 292 PRO CD HD2 sing N N 293 PRO CD HD3 sing N N 294 PRO OXT HXT sing N N 295 SER N CA sing N N 296 SER N H sing N N 297 SER N H2 sing N N 298 SER CA C sing N N 299 SER CA CB sing N N 300 SER CA HA sing N N 301 SER C O doub N N 302 SER C OXT sing N N 303 SER CB OG sing N N 304 SER CB HB2 sing N N 305 SER CB HB3 sing N N 306 SER OG HG sing N N 307 SER OXT HXT sing N N 308 THR N CA sing N N 309 THR N H sing N N 310 THR N H2 sing N N 311 THR CA C sing N N 312 THR CA CB sing N N 313 THR CA HA sing N N 314 THR C O doub N N 315 THR C OXT sing N N 316 THR CB OG1 sing N N 317 THR CB CG2 sing N N 318 THR CB HB sing N N 319 THR OG1 HG1 sing N N 320 THR CG2 HG21 sing N N 321 THR CG2 HG22 sing N N 322 THR CG2 HG23 sing N N 323 THR OXT HXT sing N N 324 TRP N CA sing N N 325 TRP N H sing N N 326 TRP N H2 sing N N 327 TRP CA C sing N N 328 TRP CA CB sing N N 329 TRP CA HA sing N N 330 TRP C O doub N N 331 TRP C OXT sing N N 332 TRP CB CG sing N N 333 TRP CB HB2 sing N N 334 TRP CB HB3 sing N N 335 TRP CG CD1 doub Y N 336 TRP CG CD2 sing Y N 337 TRP CD1 NE1 sing Y N 338 TRP CD1 HD1 sing N N 339 TRP CD2 CE2 doub Y N 340 TRP CD2 CE3 sing Y N 341 TRP NE1 CE2 sing Y N 342 TRP NE1 HE1 sing N N 343 TRP CE2 CZ2 sing Y N 344 TRP CE3 CZ3 doub Y N 345 TRP CE3 HE3 sing N N 346 TRP CZ2 CH2 doub Y N 347 TRP CZ2 HZ2 sing N N 348 TRP CZ3 CH2 sing Y N 349 TRP CZ3 HZ3 sing N N 350 TRP CH2 HH2 sing N N 351 TRP OXT HXT sing N N 352 TYR N CA sing N N 353 TYR N H sing N N 354 TYR N H2 sing N N 355 TYR CA C sing N N 356 TYR CA CB sing N N 357 TYR CA HA sing N N 358 TYR C O doub N N 359 TYR C OXT sing N N 360 TYR CB CG sing N N 361 TYR CB HB2 sing N N 362 TYR CB HB3 sing N N 363 TYR CG CD1 doub Y N 364 TYR CG CD2 sing Y N 365 TYR CD1 CE1 sing Y N 366 TYR CD1 HD1 sing N N 367 TYR CD2 CE2 doub Y N 368 TYR CD2 HD2 sing N N 369 TYR CE1 CZ doub Y N 370 TYR CE1 HE1 sing N N 371 TYR CE2 CZ sing Y N 372 TYR CE2 HE2 sing N N 373 TYR CZ OH sing N N 374 TYR OH HH sing N N 375 TYR OXT HXT sing N N 376 VAL N CA sing N N 377 VAL N H sing N N 378 VAL N H2 sing N N 379 VAL CA C sing N N 380 VAL CA CB sing N N 381 VAL CA HA sing N N 382 VAL C O doub N N 383 VAL C OXT sing N N 384 VAL CB CG1 sing N N 385 VAL CB CG2 sing N N 386 VAL CB HB sing N N 387 VAL CG1 HG11 sing N N 388 VAL CG1 HG12 sing N N 389 VAL CG1 HG13 sing N N 390 VAL CG2 HG21 sing N N 391 VAL CG2 HG22 sing N N 392 VAL CG2 HG23 sing N N 393 VAL OXT HXT sing N N 394 # _em_admin.current_status REL _em_admin.deposition_date 2025-12-11 _em_admin.deposition_site PDBJ _em_admin.entry_id 21FI _em_admin.last_update 2026-05-20 _em_admin.map_release_date 2026-05-20 _em_admin.title 'Cryo-EM structure of DddT in closed DMSP-bound conformation' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type NONE # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 2759702 _em_entity_assembly_naturalsource.organism 'Psychrobacter sp. D2' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 562 _em_entity_assembly_recombinant.organism 'Escherichia coli' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 60.00 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'TFS FALCON 4i (4k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version _em_software.reference_DOI 'PARTICLE SELECTION' ? 1 1 ? ? cryoSPARC ? ? 'IMAGE ACQUISITION' ? 2 1 ? 1 ? ? ? MASKING ? 3 1 ? 1 ? ? ? 'CTF CORRECTION' ? 4 1 ? ? ? ? ? 'LAYERLINE INDEXING' ? 5 1 ? 1 ? ? ? 'DIFFRACTION INDEXING' ? 6 1 ? 1 ? ? ? 'MODEL FITTING' ? 7 1 ? 1 ? ? ? 'MODEL REFINEMENT' ? 8 1 ? 1 ? ? ? OTHER ? 9 1 ? 1 ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? ? CLASSIFICATION ? 12 1 ? ? ? ? ? RECONSTRUCTION ? 13 1 ? ? cryoSPARC ? ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'National Science Foundation (NSF, China)' _pdbx_audit_support.country China _pdbx_audit_support.grant_number 32170127 _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 21FI _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N NA O S # loop_ #