data_21DF # _entry.id 21DF # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.417 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 21DF pdb_000021df 10.2210/pdb21df/pdb WWPDB D_1300066707 ? ? EMDB EMD-67584 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2026-11-11 ? 2 'EM metadata' 1 0 2026-11-11 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'EM metadata' repository 'Initial release' ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 21DF _pdbx_database_status.recvd_initial_deposition_date 2025-12-09 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'MtSzR methanogenic Schizorhodopsin' _pdbx_database_related.db_id EMD-67584 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 4 _pdbx_contact_author.email nureki@bs.s.u-tokyo.ac.jp _pdbx_contact_author.name_first Osamu _pdbx_contact_author.name_last Nureki _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-1813-7008 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Ebisu, I.' 1 0009-0003-0342-5979 'Tanaka, T.' 2 0000-0001-5728-7573 'Murakoshi, S.' 3 0000-0001-7019-9332 'Shihoya, W.' 4 0000-0003-4813-5740 'Nureki, O.' 5 0000-0003-1813-7008 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'MtSzR methanogenic Schizorhodopsin' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ebisu, I.' 1 0009-0003-0342-5979 primary 'Tanaka, T.' 2 0000-0001-5728-7573 primary 'Kawasaki, Y.' 3 0000-0003-4872-1125 primary 'Murakoshi, S.' 4 0000-0001-7019-9332 primary 'Shibata, K.' 5 0000-0002-9815-4336 primary 'Kato, Y.' 6 0009-0000-0341-2850 primary 'Konno, M.' 7 0000-0002-0605-1816 primary 'Shihoya, W.' 8 0000-0003-4813-5740 primary 'Inoue, K.' 9 0000-0002-6898-4347 primary 'Nureki, O.' 10 0000-0003-1813-7008 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Rhodopsin 24114.680 1 ? ? ? ? 2 non-polymer syn RETINAL 284.436 1 ? ? ? ? 3 non-polymer syn 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE 790.145 2 ? ? ? ? 4 water nat water 18.015 23 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MAGEEMLVFWAGAVIFGLATLLFVVLKLRRPEYGIFYGSDIFVCFITTISYVTMALALGTSVAADGQPIYWTRWLYYIAS CSILTLDVAYLAGRPTVTKFEVALFTGLVMFCGFLASFLTGPERWWFFAFSSAAYAGLLYTLFAGTGRAEPGMKPVMWFI LLFWTLFPVVWVLAPTGLGIITTPAGAVLYAILDIITKIVFGLWITMRILPFRQPIG ; _entity_poly.pdbx_seq_one_letter_code_can ;MAGEEMLVFWAGAVIFGLATLLFVVLKLRRPEYGIFYGSDIFVCFITTISYVTMALALGTSVAADGQPIYWTRWLYYIAS CSILTLDVAYLAGRPTVTKFEVALFTGLVMFCGFLASFLTGPERWWFFAFSSAAYAGLLYTLFAGTGRAEPGMKPVMWFI LLFWTLFPVVWVLAPTGLGIITTPAGAVLYAILDIITKIVFGLWITMRILPFRQPIG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 RETINAL RET 3 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE PC1 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 GLY n 1 4 GLU n 1 5 GLU n 1 6 MET n 1 7 LEU n 1 8 VAL n 1 9 PHE n 1 10 TRP n 1 11 ALA n 1 12 GLY n 1 13 ALA n 1 14 VAL n 1 15 ILE n 1 16 PHE n 1 17 GLY n 1 18 LEU n 1 19 ALA n 1 20 THR n 1 21 LEU n 1 22 LEU n 1 23 PHE n 1 24 VAL n 1 25 VAL n 1 26 LEU n 1 27 LYS n 1 28 LEU n 1 29 ARG n 1 30 ARG n 1 31 PRO n 1 32 GLU n 1 33 TYR n 1 34 GLY n 1 35 ILE n 1 36 PHE n 1 37 TYR n 1 38 GLY n 1 39 SER n 1 40 ASP n 1 41 ILE n 1 42 PHE n 1 43 VAL n 1 44 CYS n 1 45 PHE n 1 46 ILE n 1 47 THR n 1 48 THR n 1 49 ILE n 1 50 SER n 1 51 TYR n 1 52 VAL n 1 53 THR n 1 54 MET n 1 55 ALA n 1 56 LEU n 1 57 ALA n 1 58 LEU n 1 59 GLY n 1 60 THR n 1 61 SER n 1 62 VAL n 1 63 ALA n 1 64 ALA n 1 65 ASP n 1 66 GLY n 1 67 GLN n 1 68 PRO n 1 69 ILE n 1 70 TYR n 1 71 TRP n 1 72 THR n 1 73 ARG n 1 74 TRP n 1 75 LEU n 1 76 TYR n 1 77 TYR n 1 78 ILE n 1 79 ALA n 1 80 SER n 1 81 CYS n 1 82 SER n 1 83 ILE n 1 84 LEU n 1 85 THR n 1 86 LEU n 1 87 ASP n 1 88 VAL n 1 89 ALA n 1 90 TYR n 1 91 LEU n 1 92 ALA n 1 93 GLY n 1 94 ARG n 1 95 PRO n 1 96 THR n 1 97 VAL n 1 98 THR n 1 99 LYS n 1 100 PHE n 1 101 GLU n 1 102 VAL n 1 103 ALA n 1 104 LEU n 1 105 PHE n 1 106 THR n 1 107 GLY n 1 108 LEU n 1 109 VAL n 1 110 MET n 1 111 PHE n 1 112 CYS n 1 113 GLY n 1 114 PHE n 1 115 LEU n 1 116 ALA n 1 117 SER n 1 118 PHE n 1 119 LEU n 1 120 THR n 1 121 GLY n 1 122 PRO n 1 123 GLU n 1 124 ARG n 1 125 TRP n 1 126 TRP n 1 127 PHE n 1 128 PHE n 1 129 ALA n 1 130 PHE n 1 131 SER n 1 132 SER n 1 133 ALA n 1 134 ALA n 1 135 TYR n 1 136 ALA n 1 137 GLY n 1 138 LEU n 1 139 LEU n 1 140 TYR n 1 141 THR n 1 142 LEU n 1 143 PHE n 1 144 ALA n 1 145 GLY n 1 146 THR n 1 147 GLY n 1 148 ARG n 1 149 ALA n 1 150 GLU n 1 151 PRO n 1 152 GLY n 1 153 MET n 1 154 LYS n 1 155 PRO n 1 156 VAL n 1 157 MET n 1 158 TRP n 1 159 PHE n 1 160 ILE n 1 161 LEU n 1 162 LEU n 1 163 PHE n 1 164 TRP n 1 165 THR n 1 166 LEU n 1 167 PHE n 1 168 PRO n 1 169 VAL n 1 170 VAL n 1 171 TRP n 1 172 VAL n 1 173 LEU n 1 174 ALA n 1 175 PRO n 1 176 THR n 1 177 GLY n 1 178 LEU n 1 179 GLY n 1 180 ILE n 1 181 ILE n 1 182 THR n 1 183 THR n 1 184 PRO n 1 185 ALA n 1 186 GLY n 1 187 ALA n 1 188 VAL n 1 189 LEU n 1 190 TYR n 1 191 ALA n 1 192 ILE n 1 193 LEU n 1 194 ASP n 1 195 ILE n 1 196 ILE n 1 197 THR n 1 198 LYS n 1 199 ILE n 1 200 VAL n 1 201 PHE n 1 202 GLY n 1 203 LEU n 1 204 TRP n 1 205 ILE n 1 206 THR n 1 207 MET n 1 208 ARG n 1 209 ILE n 1 210 LEU n 1 211 PRO n 1 212 PHE n 1 213 ARG n 1 214 GLN n 1 215 PRO n 1 216 ILE n 1 217 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 217 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ABH15_09795 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Methanoculleus taiwanensis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1550565 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PC1 non-polymer . 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE 3-SN-PHOSPHATIDYLCHOLINE 'C44 H88 N O8 P' 790.145 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 RET non-polymer . RETINAL ? 'C20 H28 O' 284.436 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 ALA 2 2 ? ? ? A . n A 1 3 GLY 3 3 ? ? ? A . n A 1 4 GLU 4 4 4 GLU GLU A . n A 1 5 GLU 5 5 5 GLU GLU A . n A 1 6 MET 6 6 6 MET MET A . n A 1 7 LEU 7 7 7 LEU LEU A . n A 1 8 VAL 8 8 8 VAL VAL A . n A 1 9 PHE 9 9 9 PHE PHE A . n A 1 10 TRP 10 10 10 TRP TRP A . n A 1 11 ALA 11 11 11 ALA ALA A . n A 1 12 GLY 12 12 12 GLY GLY A . n A 1 13 ALA 13 13 13 ALA ALA A . n A 1 14 VAL 14 14 14 VAL VAL A . n A 1 15 ILE 15 15 15 ILE ILE A . n A 1 16 PHE 16 16 16 PHE PHE A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 LEU 18 18 18 LEU LEU A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 THR 20 20 20 THR THR A . n A 1 21 LEU 21 21 21 LEU LEU A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 PHE 23 23 23 PHE PHE A . n A 1 24 VAL 24 24 24 VAL VAL A . n A 1 25 VAL 25 25 25 VAL VAL A . n A 1 26 LEU 26 26 26 LEU LEU A . n A 1 27 LYS 27 27 27 LYS LYS A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 ARG 29 29 29 ARG ARG A . n A 1 30 ARG 30 30 30 ARG ARG A . n A 1 31 PRO 31 31 31 PRO PRO A . n A 1 32 GLU 32 32 32 GLU GLU A . n A 1 33 TYR 33 33 33 TYR TYR A . n A 1 34 GLY 34 34 34 GLY GLY A . n A 1 35 ILE 35 35 35 ILE ILE A . n A 1 36 PHE 36 36 36 PHE PHE A . n A 1 37 TYR 37 37 37 TYR TYR A . n A 1 38 GLY 38 38 38 GLY GLY A . n A 1 39 SER 39 39 39 SER SER A . n A 1 40 ASP 40 40 40 ASP ASP A . n A 1 41 ILE 41 41 41 ILE ILE A . n A 1 42 PHE 42 42 42 PHE PHE A . n A 1 43 VAL 43 43 43 VAL VAL A . n A 1 44 CYS 44 44 44 CYS CYS A . n A 1 45 PHE 45 45 45 PHE PHE A . n A 1 46 ILE 46 46 46 ILE ILE A . n A 1 47 THR 47 47 47 THR THR A . n A 1 48 THR 48 48 48 THR THR A . n A 1 49 ILE 49 49 49 ILE ILE A . n A 1 50 SER 50 50 50 SER SER A . n A 1 51 TYR 51 51 51 TYR TYR A . n A 1 52 VAL 52 52 52 VAL VAL A . n A 1 53 THR 53 53 53 THR THR A . n A 1 54 MET 54 54 54 MET MET A . n A 1 55 ALA 55 55 55 ALA ALA A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 ALA 57 57 57 ALA ALA A . n A 1 58 LEU 58 58 58 LEU LEU A . n A 1 59 GLY 59 59 59 GLY GLY A . n A 1 60 THR 60 60 60 THR THR A . n A 1 61 SER 61 61 61 SER SER A . n A 1 62 VAL 62 62 62 VAL VAL A . n A 1 63 ALA 63 63 63 ALA ALA A . n A 1 64 ALA 64 64 64 ALA ALA A . n A 1 65 ASP 65 65 65 ASP ASP A . n A 1 66 GLY 66 66 66 GLY GLY A . n A 1 67 GLN 67 67 67 GLN GLN A . n A 1 68 PRO 68 68 68 PRO PRO A . n A 1 69 ILE 69 69 69 ILE ILE A . n A 1 70 TYR 70 70 70 TYR TYR A . n A 1 71 TRP 71 71 71 TRP TRP A . n A 1 72 THR 72 72 72 THR THR A . n A 1 73 ARG 73 73 73 ARG ARG A . n A 1 74 TRP 74 74 74 TRP TRP A . n A 1 75 LEU 75 75 75 LEU LEU A . n A 1 76 TYR 76 76 76 TYR TYR A . n A 1 77 TYR 77 77 77 TYR TYR A . n A 1 78 ILE 78 78 78 ILE ILE A . n A 1 79 ALA 79 79 79 ALA ALA A . n A 1 80 SER 80 80 80 SER SER A . n A 1 81 CYS 81 81 81 CYS CYS A . n A 1 82 SER 82 82 82 SER SER A . n A 1 83 ILE 83 83 83 ILE ILE A . n A 1 84 LEU 84 84 84 LEU LEU A . n A 1 85 THR 85 85 85 THR THR A . n A 1 86 LEU 86 86 86 LEU LEU A . n A 1 87 ASP 87 87 87 ASP ASP A . n A 1 88 VAL 88 88 88 VAL VAL A . n A 1 89 ALA 89 89 89 ALA ALA A . n A 1 90 TYR 90 90 90 TYR TYR A . n A 1 91 LEU 91 91 91 LEU LEU A . n A 1 92 ALA 92 92 92 ALA ALA A . n A 1 93 GLY 93 93 93 GLY GLY A . n A 1 94 ARG 94 94 94 ARG ARG A . n A 1 95 PRO 95 95 95 PRO PRO A . n A 1 96 THR 96 96 96 THR THR A . n A 1 97 VAL 97 97 97 VAL VAL A . n A 1 98 THR 98 98 98 THR THR A . n A 1 99 LYS 99 99 99 LYS LYS A . n A 1 100 PHE 100 100 100 PHE PHE A . n A 1 101 GLU 101 101 101 GLU GLU A . n A 1 102 VAL 102 102 102 VAL VAL A . n A 1 103 ALA 103 103 103 ALA ALA A . n A 1 104 LEU 104 104 104 LEU LEU A . n A 1 105 PHE 105 105 105 PHE PHE A . n A 1 106 THR 106 106 106 THR THR A . n A 1 107 GLY 107 107 107 GLY GLY A . n A 1 108 LEU 108 108 108 LEU LEU A . n A 1 109 VAL 109 109 109 VAL VAL A . n A 1 110 MET 110 110 110 MET MET A . n A 1 111 PHE 111 111 111 PHE PHE A . n A 1 112 CYS 112 112 112 CYS CYS A . n A 1 113 GLY 113 113 113 GLY GLY A . n A 1 114 PHE 114 114 114 PHE PHE A . n A 1 115 LEU 115 115 115 LEU LEU A . n A 1 116 ALA 116 116 116 ALA ALA A . n A 1 117 SER 117 117 117 SER SER A . n A 1 118 PHE 118 118 118 PHE PHE A . n A 1 119 LEU 119 119 119 LEU LEU A . n A 1 120 THR 120 120 120 THR THR A . n A 1 121 GLY 121 121 121 GLY GLY A . n A 1 122 PRO 122 122 122 PRO PRO A . n A 1 123 GLU 123 123 123 GLU GLU A . n A 1 124 ARG 124 124 124 ARG ARG A . n A 1 125 TRP 125 125 125 TRP TRP A . n A 1 126 TRP 126 126 126 TRP TRP A . n A 1 127 PHE 127 127 127 PHE PHE A . n A 1 128 PHE 128 128 128 PHE PHE A . n A 1 129 ALA 129 129 129 ALA ALA A . n A 1 130 PHE 130 130 130 PHE PHE A . n A 1 131 SER 131 131 131 SER SER A . n A 1 132 SER 132 132 132 SER SER A . n A 1 133 ALA 133 133 133 ALA ALA A . n A 1 134 ALA 134 134 134 ALA ALA A . n A 1 135 TYR 135 135 135 TYR TYR A . n A 1 136 ALA 136 136 136 ALA ALA A . n A 1 137 GLY 137 137 137 GLY GLY A . n A 1 138 LEU 138 138 138 LEU LEU A . n A 1 139 LEU 139 139 139 LEU LEU A . n A 1 140 TYR 140 140 140 TYR TYR A . n A 1 141 THR 141 141 141 THR THR A . n A 1 142 LEU 142 142 142 LEU LEU A . n A 1 143 PHE 143 143 143 PHE PHE A . n A 1 144 ALA 144 144 144 ALA ALA A . n A 1 145 GLY 145 145 145 GLY GLY A . n A 1 146 THR 146 146 146 THR THR A . n A 1 147 GLY 147 147 147 GLY GLY A . n A 1 148 ARG 148 148 148 ARG ARG A . n A 1 149 ALA 149 149 149 ALA ALA A . n A 1 150 GLU 150 150 150 GLU GLU A . n A 1 151 PRO 151 151 151 PRO PRO A . n A 1 152 GLY 152 152 152 GLY GLY A . n A 1 153 MET 153 153 153 MET MET A . n A 1 154 LYS 154 154 154 LYS LYS A . n A 1 155 PRO 155 155 155 PRO PRO A . n A 1 156 VAL 156 156 156 VAL VAL A . n A 1 157 MET 157 157 157 MET MET A . n A 1 158 TRP 158 158 158 TRP TRP A . n A 1 159 PHE 159 159 159 PHE PHE A . n A 1 160 ILE 160 160 160 ILE ILE A . n A 1 161 LEU 161 161 161 LEU LEU A . n A 1 162 LEU 162 162 162 LEU LEU A . n A 1 163 PHE 163 163 163 PHE PHE A . n A 1 164 TRP 164 164 164 TRP TRP A . n A 1 165 THR 165 165 165 THR THR A . n A 1 166 LEU 166 166 166 LEU LEU A . n A 1 167 PHE 167 167 167 PHE PHE A . n A 1 168 PRO 168 168 168 PRO PRO A . n A 1 169 VAL 169 169 169 VAL VAL A . n A 1 170 VAL 170 170 170 VAL VAL A . n A 1 171 TRP 171 171 171 TRP TRP A . n A 1 172 VAL 172 172 172 VAL VAL A . n A 1 173 LEU 173 173 173 LEU LEU A . n A 1 174 ALA 174 174 174 ALA ALA A . n A 1 175 PRO 175 175 175 PRO PRO A . n A 1 176 THR 176 176 176 THR THR A . n A 1 177 GLY 177 177 177 GLY GLY A . n A 1 178 LEU 178 178 178 LEU LEU A . n A 1 179 GLY 179 179 179 GLY GLY A . n A 1 180 ILE 180 180 180 ILE ILE A . n A 1 181 ILE 181 181 181 ILE ILE A . n A 1 182 THR 182 182 182 THR THR A . n A 1 183 THR 183 183 183 THR THR A . n A 1 184 PRO 184 184 184 PRO PRO A . n A 1 185 ALA 185 185 185 ALA ALA A . n A 1 186 GLY 186 186 186 GLY GLY A . n A 1 187 ALA 187 187 187 ALA ALA A . n A 1 188 VAL 188 188 188 VAL VAL A . n A 1 189 LEU 189 189 189 LEU LEU A . n A 1 190 TYR 190 190 190 TYR TYR A . n A 1 191 ALA 191 191 191 ALA ALA A . n A 1 192 ILE 192 192 192 ILE ILE A . n A 1 193 LEU 193 193 193 LEU LEU A . n A 1 194 ASP 194 194 194 ASP ASP A . n A 1 195 ILE 195 195 195 ILE ILE A . n A 1 196 ILE 196 196 196 ILE ILE A . n A 1 197 THR 197 197 197 THR THR A . n A 1 198 LYS 198 198 198 LYS LYS A . n A 1 199 ILE 199 199 199 ILE ILE A . n A 1 200 VAL 200 200 200 VAL VAL A . n A 1 201 PHE 201 201 201 PHE PHE A . n A 1 202 GLY 202 202 202 GLY GLY A . n A 1 203 LEU 203 203 203 LEU LEU A . n A 1 204 TRP 204 204 204 TRP TRP A . n A 1 205 ILE 205 205 205 ILE ILE A . n A 1 206 THR 206 206 206 THR THR A . n A 1 207 MET 207 207 207 MET MET A . n A 1 208 ARG 208 208 208 ARG ARG A . n A 1 209 ILE 209 209 209 ILE ILE A . n A 1 210 LEU 210 210 210 LEU LEU A . n A 1 211 PRO 211 211 211 PRO PRO A . n A 1 212 PHE 212 212 ? ? ? A . n A 1 213 ARG 213 213 ? ? ? A . n A 1 214 GLN 214 214 ? ? ? A . n A 1 215 PRO 215 215 ? ? ? A . n A 1 216 ILE 216 216 ? ? ? A . n A 1 217 GLY 217 217 ? ? ? A . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id RET _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id RET _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 RET 1 301 1002 RET RET A . C 3 PC1 1 302 1101 PC1 PC1 A . D 3 PC1 1 303 1103 PC1 PC1 A . E 4 HOH 1 401 19 HOH HOH A . E 4 HOH 2 402 13 HOH HOH A . E 4 HOH 3 403 8 HOH HOH A . E 4 HOH 4 404 11 HOH HOH A . E 4 HOH 5 405 18 HOH HOH A . E 4 HOH 6 406 17 HOH HOH A . E 4 HOH 7 407 20 HOH HOH A . E 4 HOH 8 408 4 HOH HOH A . E 4 HOH 9 409 24 HOH HOH A . E 4 HOH 10 410 7 HOH HOH A . E 4 HOH 11 411 21 HOH HOH A . E 4 HOH 12 412 6 HOH HOH A . E 4 HOH 13 413 10 HOH HOH A . E 4 HOH 14 414 1 HOH HOH A . E 4 HOH 15 415 14 HOH HOH A . E 4 HOH 16 416 25 HOH HOH A . E 4 HOH 17 417 26 HOH HOH A . E 4 HOH 18 418 16 HOH HOH A . E 4 HOH 19 419 15 HOH HOH A . E 4 HOH 20 420 2 HOH HOH A . E 4 HOH 21 421 9 HOH HOH A . E 4 HOH 22 422 22 HOH HOH A . E 4 HOH 23 423 12 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 N 1 A PC1 302 ? C11 ? C PC1 1 C11 2 1 N 1 A PC1 302 ? C12 ? C PC1 1 C12 3 1 N 1 A PC1 302 ? N ? C PC1 1 N 4 1 N 1 A PC1 302 ? C13 ? C PC1 1 C13 5 1 N 1 A PC1 302 ? C14 ? C PC1 1 C14 6 1 N 1 A PC1 302 ? C15 ? C PC1 1 C15 7 1 N 1 A PC1 302 ? C2I ? C PC1 1 C2I 8 1 N 1 A PC1 302 ? C3D ? C PC1 1 C3D 9 1 N 1 A PC1 302 ? C3E ? C PC1 1 C3E 10 1 N 1 A PC1 302 ? C3F ? C PC1 1 C3F 11 1 N 1 A PC1 302 ? C3G ? C PC1 1 C3G 12 1 N 1 A PC1 302 ? C3H ? C PC1 1 C3H 13 1 N 1 A PC1 302 ? C3I ? C PC1 1 C3I 14 1 N 1 A PC1 303 ? O12 ? D PC1 1 O12 15 1 N 1 A PC1 303 ? P ? D PC1 1 P 16 1 N 1 A PC1 303 ? O14 ? D PC1 1 O14 17 1 N 1 A PC1 303 ? O13 ? D PC1 1 O13 18 1 N 1 A PC1 303 ? C11 ? D PC1 1 C11 19 1 N 1 A PC1 303 ? C12 ? D PC1 1 C12 20 1 N 1 A PC1 303 ? N ? D PC1 1 N 21 1 N 1 A PC1 303 ? C13 ? D PC1 1 C13 22 1 N 1 A PC1 303 ? C14 ? D PC1 1 C14 23 1 N 1 A PC1 303 ? C15 ? D PC1 1 C15 24 1 N 1 A PC1 303 ? O11 ? D PC1 1 O11 25 1 N 1 A PC1 303 ? C1 ? D PC1 1 C1 26 1 N 1 A PC1 303 ? C2 ? D PC1 1 C2 27 1 N 1 A PC1 303 ? O21 ? D PC1 1 O21 28 1 N 1 A PC1 303 ? O22 ? D PC1 1 O22 29 1 N 1 A PC1 303 ? C2G ? D PC1 1 C2G 30 1 N 1 A PC1 303 ? C2H ? D PC1 1 C2H 31 1 N 1 A PC1 303 ? C2I ? D PC1 1 C2I 32 1 N 1 A PC1 303 ? C3 ? D PC1 1 C3 33 1 N 1 A PC1 303 ? O31 ? D PC1 1 O31 34 1 N 1 A PC1 303 ? C31 ? D PC1 1 C31 35 1 N 1 A PC1 303 ? O32 ? D PC1 1 O32 36 1 N 1 A PC1 303 ? C32 ? D PC1 1 C32 37 1 N 1 A PC1 303 ? C33 ? D PC1 1 C33 38 1 N 1 A PC1 303 ? C34 ? D PC1 1 C34 39 1 N 1 A PC1 303 ? C35 ? D PC1 1 C35 40 1 N 1 A PC1 303 ? C36 ? D PC1 1 C36 41 1 N 1 A PC1 303 ? C37 ? D PC1 1 C37 42 1 N 1 A PC1 303 ? C38 ? D PC1 1 C38 43 1 N 1 A PC1 303 ? C39 ? D PC1 1 C39 44 1 N 1 A PC1 303 ? C3A ? D PC1 1 C3A 45 1 N 1 A PC1 303 ? C3B ? D PC1 1 C3B 46 1 N 1 A PC1 303 ? C3C ? D PC1 1 C3C 47 1 N 1 A PC1 303 ? C3D ? D PC1 1 C3D 48 1 N 1 A PC1 303 ? C3E ? D PC1 1 C3E 49 1 N 1 A PC1 303 ? C3F ? D PC1 1 C3F 50 1 N 1 A PC1 303 ? C3G ? D PC1 1 C3G 51 1 N 1 A PC1 303 ? C3H ? D PC1 1 C3H 52 1 N 1 A PC1 303 ? C3I ? D PC1 1 C3I # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 21DF _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 21DF _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 21DF _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 21DF _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.38 _refine.ls_d_res_low ? _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work ? _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.correlation_coeff_I_to_Fcsqd_work ? _refine.correlation_coeff_I_to_Fcsqd_free ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'REAL-SPACE (WEIGHTED MAP SUM AT ATOM CENTERS)' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_Zscore _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.002 ? 5313 ? f_bond_d ? ? ? 'ELECTRON MICROSCOPY' ? 0.512 ? 7230 ? f_angle_d ? ? ? 'ELECTRON MICROSCOPY' ? 7.766 ? 834 ? f_dihedral_angle_d ? ? ? 'ELECTRON MICROSCOPY' ? 0.038 ? 816 ? f_chiral_restr ? ? ? 'ELECTRON MICROSCOPY' ? 0.006 ? 828 ? f_plane_restr ? ? ? # _struct.entry_id 21DF _struct.title 'MtSzR methanogenic Schizorhodopsin' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 21DF _struct_keywords.text 'Schizorhodopsin, MEMBRANE PROTEIN' _struct_keywords.pdbx_keywords 'MEMBRANE PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A0A498H310_9EURY _struct_ref.pdbx_db_accession A0A498H310 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MAGEEMLVFWAGAVIFGLATLLFVVLKLRRPEYGIFYGSDIFVCFITTISYVTMALALGTSVAADGQPIYWTRWLYYIAS CSILTLDVAYLAGRPTVTKFEVALFTGLVMFCGFLASFLTGPERWWFFAFSSAAYAGLLYTLFAGTGRAEPGMKPVMWFI LLFWTLFPVVWVLAPTGLGIITTPAGAVLYAILDIITKIVFGLWITMRILPFRQPIG ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 21DF _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 217 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A0A498H310 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 217 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 217 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 'complete point assembly' ? trimeric 3 2 'point asymmetric unit' ? monomeric 1 3 'point asymmetric unit, std point frame' ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 '(1-3)' A,B,C,D,E 2 1 A,B,C,D,E 3 P A,B,C,D,E # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] P 'transform to point frame' ? ? 0.28806712 -0.95761022 0.00000000 88.91552 0.95761022 0.28806712 0.00000000 -165.42598 0.00000000 0.00000000 1.00000000 -134.34861 1 'identity operation' 1_555 x,y,z 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 1.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 2 'point symmetry operation' ? ? -0.50000000 -0.86602540 0.00000000 314.20830 0.86602540 -0.50000000 0.00000000 84.19215 0.00000000 0.00000000 1.00000000 0.00000 3 'point symmetry operation' ? ? -0.50000000 0.86602540 0.00000000 84.19161 -0.86602540 -0.50000000 0.00000000 314.20844 0.00000000 0.00000000 1.00000000 0.00000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLU A 4 ? ARG A 30 ? GLU A 4 ARG A 30 1 ? 27 HELX_P HELX_P2 AA2 TYR A 33 ? LEU A 56 ? TYR A 33 LEU A 56 1 ? 24 HELX_P HELX_P3 AA3 TRP A 71 ? GLY A 93 ? TRP A 71 GLY A 93 1 ? 23 HELX_P HELX_P4 AA4 PRO A 95 ? LEU A 119 ? PRO A 95 LEU A 119 1 ? 25 HELX_P HELX_P5 AA5 GLU A 123 ? ALA A 144 ? GLU A 123 ALA A 144 1 ? 22 HELX_P HELX_P6 AA6 GLY A 152 ? ALA A 174 ? GLY A 152 ALA A 174 1 ? 23 HELX_P HELX_P7 AA7 THR A 182 ? ILE A 209 ? THR A 182 ILE A 209 1 ? 28 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag one _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id LYS _struct_conn.ptnr1_label_seq_id 198 _struct_conn.ptnr1_label_atom_id NZ _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_comp_id RET _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_label_atom_id C15 _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id LYS _struct_conn.ptnr1_auth_seq_id 198 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id RET _struct_conn.ptnr2_auth_seq_id 301 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.341 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_modification_feature.ordinal 1 _pdbx_modification_feature.label_comp_id RET _pdbx_modification_feature.label_asym_id B _pdbx_modification_feature.label_seq_id . _pdbx_modification_feature.label_alt_id ? _pdbx_modification_feature.modified_residue_label_comp_id LYS _pdbx_modification_feature.modified_residue_label_asym_id A _pdbx_modification_feature.modified_residue_label_seq_id 198 _pdbx_modification_feature.modified_residue_label_alt_id ? _pdbx_modification_feature.auth_comp_id RET _pdbx_modification_feature.auth_asym_id A _pdbx_modification_feature.auth_seq_id 301 _pdbx_modification_feature.PDB_ins_code ? _pdbx_modification_feature.symmetry 1_555 _pdbx_modification_feature.modified_residue_auth_comp_id LYS _pdbx_modification_feature.modified_residue_auth_asym_id A _pdbx_modification_feature.modified_residue_auth_seq_id 198 _pdbx_modification_feature.modified_residue_PDB_ins_code ? _pdbx_modification_feature.modified_residue_symmetry 1_555 _pdbx_modification_feature.comp_id_linking_atom C15 _pdbx_modification_feature.modified_residue_id_linking_atom NZ _pdbx_modification_feature.modified_residue_id LYS _pdbx_modification_feature.ref_pcm_id 1 _pdbx_modification_feature.ref_comp_id RET _pdbx_modification_feature.type Retinoylation _pdbx_modification_feature.category Lipid/lipid-like # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id AA1 _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 SER A 61 ? VAL A 62 ? SER A 61 VAL A 62 AA1 2 PRO A 68 ? ILE A 69 ? PRO A 68 ILE A 69 # _pdbx_struct_sheet_hbond.sheet_id AA1 _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id SER _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 61 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id SER _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 61 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id ILE _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 69 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id ILE _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 69 # _pdbx_entry_details.entry_id 21DF _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 31 ? ? -78.74 45.44 2 1 TYR A 33 ? ? -95.99 32.57 3 1 ALA A 149 ? ? 53.30 -97.49 4 1 ILE A 209 ? ? -120.43 -51.05 # _pdbx_point_symmetry.entry_id 21DF _pdbx_point_symmetry.Schoenflies_symbol C _pdbx_point_symmetry.circular_symmetry 3 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 21DF _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 21DF _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 2.38 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 8692253 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 8.0 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.name MtSzR _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1 # _em_imaging.entry_id 21DF _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'DARK FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 600 _em_imaging.nominal_defocus_max 1500 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? _em_imaging.objective_aperture ? _em_imaging.microscope_serial_number ? _em_imaging.microscope_version ? # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material GOLD _em_sample_support.grid_mesh_size 300 _em_sample_support.grid_type ? _em_sample_support.details ? _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_vitrification.entry_id 21DF _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 21DF _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A ALA 2 ? A ALA 2 3 1 Y 1 A GLY 3 ? A GLY 3 4 1 Y 1 A PHE 212 ? A PHE 212 5 1 Y 1 A ARG 213 ? A ARG 213 6 1 Y 1 A GLN 214 ? A GLN 214 7 1 Y 1 A PRO 215 ? A PRO 215 8 1 Y 1 A ILE 216 ? A ILE 216 9 1 Y 1 A GLY 217 ? A GLY 217 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASP N N N N 41 ASP CA C N S 42 ASP C C N N 43 ASP O O N N 44 ASP CB C N N 45 ASP CG C N N 46 ASP OD1 O N N 47 ASP OD2 O N N 48 ASP OXT O N N 49 ASP H H N N 50 ASP H2 H N N 51 ASP HA H N N 52 ASP HB2 H N N 53 ASP HB3 H N N 54 ASP HD2 H N N 55 ASP HXT H N N 56 CYS N N N N 57 CYS CA C N R 58 CYS C C N N 59 CYS O O N N 60 CYS CB C N N 61 CYS SG S N N 62 CYS OXT O N N 63 CYS H H N N 64 CYS H2 H N N 65 CYS HA H N N 66 CYS HB2 H N N 67 CYS HB3 H N N 68 CYS HG H N N 69 CYS HXT H N N 70 GLN N N N N 71 GLN CA C N S 72 GLN C C N N 73 GLN O O N N 74 GLN CB C N N 75 GLN CG C N N 76 GLN CD C N N 77 GLN OE1 O N N 78 GLN NE2 N N N 79 GLN OXT O N N 80 GLN H H N N 81 GLN H2 H N N 82 GLN HA H N N 83 GLN HB2 H N N 84 GLN HB3 H N N 85 GLN HG2 H N N 86 GLN HG3 H N N 87 GLN HE21 H N N 88 GLN HE22 H N N 89 GLN HXT H N N 90 GLU N N N N 91 GLU CA C N S 92 GLU C C N N 93 GLU O O N N 94 GLU CB C N N 95 GLU CG C N N 96 GLU CD C N N 97 GLU OE1 O N N 98 GLU OE2 O N N 99 GLU OXT O N N 100 GLU H H N N 101 GLU H2 H N N 102 GLU HA H N N 103 GLU HB2 H N N 104 GLU HB3 H N N 105 GLU HG2 H N N 106 GLU HG3 H N N 107 GLU HE2 H N N 108 GLU HXT H N N 109 GLY N N N N 110 GLY CA C N N 111 GLY C C N N 112 GLY O O N N 113 GLY OXT O N N 114 GLY H H N N 115 GLY H2 H N N 116 GLY HA2 H N N 117 GLY HA3 H N N 118 GLY HXT H N N 119 HOH O O N N 120 HOH H1 H N N 121 HOH H2 H N N 122 ILE N N N N 123 ILE CA C N S 124 ILE C C N N 125 ILE O O N N 126 ILE CB C N S 127 ILE CG1 C N N 128 ILE CG2 C N N 129 ILE CD1 C N N 130 ILE OXT O N N 131 ILE H H N N 132 ILE H2 H N N 133 ILE HA H N N 134 ILE HB H N N 135 ILE HG12 H N N 136 ILE HG13 H N N 137 ILE HG21 H N N 138 ILE HG22 H N N 139 ILE HG23 H N N 140 ILE HD11 H N N 141 ILE HD12 H N N 142 ILE HD13 H N N 143 ILE HXT H N N 144 LEU N N N N 145 LEU CA C N S 146 LEU C C N N 147 LEU O O N N 148 LEU CB C N N 149 LEU CG C N N 150 LEU CD1 C N N 151 LEU CD2 C N N 152 LEU OXT O N N 153 LEU H H N N 154 LEU H2 H N N 155 LEU HA H N N 156 LEU HB2 H N N 157 LEU HB3 H N N 158 LEU HG H N N 159 LEU HD11 H N N 160 LEU HD12 H N N 161 LEU HD13 H N N 162 LEU HD21 H N N 163 LEU HD22 H N N 164 LEU HD23 H N N 165 LEU HXT H N N 166 LYS N N N N 167 LYS CA C N S 168 LYS C C N N 169 LYS O O N N 170 LYS CB C N N 171 LYS CG C N N 172 LYS CD C N N 173 LYS CE C N N 174 LYS NZ N N N 175 LYS OXT O N N 176 LYS H H N N 177 LYS H2 H N N 178 LYS HA H N N 179 LYS HB2 H N N 180 LYS HB3 H N N 181 LYS HG2 H N N 182 LYS HG3 H N N 183 LYS HD2 H N N 184 LYS HD3 H N N 185 LYS HE2 H N N 186 LYS HE3 H N N 187 LYS HZ1 H N N 188 LYS HZ2 H N N 189 LYS HZ3 H N N 190 LYS HXT H N N 191 MET N N N N 192 MET CA C N S 193 MET C C N N 194 MET O O N N 195 MET CB C N N 196 MET CG C N N 197 MET SD S N N 198 MET CE C N N 199 MET OXT O N N 200 MET H H N N 201 MET H2 H N N 202 MET HA H N N 203 MET HB2 H N N 204 MET HB3 H N N 205 MET HG2 H N N 206 MET HG3 H N N 207 MET HE1 H N N 208 MET HE2 H N N 209 MET HE3 H N N 210 MET HXT H N N 211 PC1 O12 O N N 212 PC1 P P N N 213 PC1 O14 O N N 214 PC1 O13 O N N 215 PC1 C11 C N N 216 PC1 C12 C N N 217 PC1 N N N N 218 PC1 C13 C N N 219 PC1 C14 C N N 220 PC1 C15 C N N 221 PC1 O11 O N N 222 PC1 C1 C N N 223 PC1 C2 C N R 224 PC1 O21 O N N 225 PC1 C21 C N N 226 PC1 O22 O N N 227 PC1 C22 C N N 228 PC1 C23 C N N 229 PC1 C24 C N N 230 PC1 C25 C N N 231 PC1 C26 C N N 232 PC1 C27 C N N 233 PC1 C28 C N N 234 PC1 C29 C N N 235 PC1 C2A C N N 236 PC1 C2B C N N 237 PC1 C2C C N N 238 PC1 C2D C N N 239 PC1 C2E C N N 240 PC1 C2F C N N 241 PC1 C2G C N N 242 PC1 C2H C N N 243 PC1 C2I C N N 244 PC1 C3 C N N 245 PC1 O31 O N N 246 PC1 C31 C N N 247 PC1 O32 O N N 248 PC1 C32 C N N 249 PC1 C33 C N N 250 PC1 C34 C N N 251 PC1 C35 C N N 252 PC1 C36 C N N 253 PC1 C37 C N N 254 PC1 C38 C N N 255 PC1 C39 C N N 256 PC1 C3A C N N 257 PC1 C3B C N N 258 PC1 C3C C N N 259 PC1 C3D C N N 260 PC1 C3E C N N 261 PC1 C3F C N N 262 PC1 C3G C N N 263 PC1 C3H C N N 264 PC1 C3I C N N 265 PC1 H111 H N N 266 PC1 H112 H N N 267 PC1 H121 H N N 268 PC1 H122 H N N 269 PC1 H131 H N N 270 PC1 H132 H N N 271 PC1 H133 H N N 272 PC1 H141 H N N 273 PC1 H142 H N N 274 PC1 H143 H N N 275 PC1 H151 H N N 276 PC1 H152 H N N 277 PC1 H153 H N N 278 PC1 H11 H N N 279 PC1 H12 H N N 280 PC1 H2 H N N 281 PC1 H221 H N N 282 PC1 H222 H N N 283 PC1 H231 H N N 284 PC1 H232 H N N 285 PC1 H241 H N N 286 PC1 H242 H N N 287 PC1 H251 H N N 288 PC1 H252 H N N 289 PC1 H261 H N N 290 PC1 H262 H N N 291 PC1 H271 H N N 292 PC1 H272 H N N 293 PC1 H281 H N N 294 PC1 H282 H N N 295 PC1 H291 H N N 296 PC1 H292 H N N 297 PC1 H2A1 H N N 298 PC1 H2A2 H N N 299 PC1 H2B1 H N N 300 PC1 H2B2 H N N 301 PC1 H2C1 H N N 302 PC1 H2C2 H N N 303 PC1 H2D1 H N N 304 PC1 H2D2 H N N 305 PC1 H2E1 H N N 306 PC1 H2E2 H N N 307 PC1 H2F1 H N N 308 PC1 H2F2 H N N 309 PC1 H2G1 H N N 310 PC1 H2G2 H N N 311 PC1 H2H1 H N N 312 PC1 H2H2 H N N 313 PC1 H2I1 H N N 314 PC1 H2I2 H N N 315 PC1 H2I3 H N N 316 PC1 H31 H N N 317 PC1 H32 H N N 318 PC1 H321 H N N 319 PC1 H322 H N N 320 PC1 H331 H N N 321 PC1 H332 H N N 322 PC1 H341 H N N 323 PC1 H342 H N N 324 PC1 H351 H N N 325 PC1 H352 H N N 326 PC1 H361 H N N 327 PC1 H362 H N N 328 PC1 H371 H N N 329 PC1 H372 H N N 330 PC1 H381 H N N 331 PC1 H382 H N N 332 PC1 H391 H N N 333 PC1 H392 H N N 334 PC1 H3A1 H N N 335 PC1 H3A2 H N N 336 PC1 H3B1 H N N 337 PC1 H3B2 H N N 338 PC1 H3C1 H N N 339 PC1 H3C2 H N N 340 PC1 H3D1 H N N 341 PC1 H3D2 H N N 342 PC1 H3E1 H N N 343 PC1 H3E2 H N N 344 PC1 H3F1 H N N 345 PC1 H3F2 H N N 346 PC1 H3G1 H N N 347 PC1 H3G2 H N N 348 PC1 H3H1 H N N 349 PC1 H3H2 H N N 350 PC1 H3I1 H N N 351 PC1 H3I2 H N N 352 PC1 H3I3 H N N 353 PHE N N N N 354 PHE CA C N S 355 PHE C C N N 356 PHE O O N N 357 PHE CB C N N 358 PHE CG C Y N 359 PHE CD1 C Y N 360 PHE CD2 C Y N 361 PHE CE1 C Y N 362 PHE CE2 C Y N 363 PHE CZ C Y N 364 PHE OXT O N N 365 PHE H H N N 366 PHE H2 H N N 367 PHE HA H N N 368 PHE HB2 H N N 369 PHE HB3 H N N 370 PHE HD1 H N N 371 PHE HD2 H N N 372 PHE HE1 H N N 373 PHE HE2 H N N 374 PHE HZ H N N 375 PHE HXT H N N 376 PRO N N N N 377 PRO CA C N S 378 PRO C C N N 379 PRO O O N N 380 PRO CB C N N 381 PRO CG C N N 382 PRO CD C N N 383 PRO OXT O N N 384 PRO H H N N 385 PRO HA H N N 386 PRO HB2 H N N 387 PRO HB3 H N N 388 PRO HG2 H N N 389 PRO HG3 H N N 390 PRO HD2 H N N 391 PRO HD3 H N N 392 PRO HXT H N N 393 RET C1 C N N 394 RET C2 C N N 395 RET C3 C N N 396 RET C4 C N N 397 RET C5 C N N 398 RET C6 C N N 399 RET C7 C N N 400 RET C8 C N N 401 RET C9 C N N 402 RET C10 C N N 403 RET C11 C N N 404 RET C12 C N N 405 RET C13 C N N 406 RET C14 C N N 407 RET C15 C N N 408 RET O1 O N N 409 RET C16 C N N 410 RET C17 C N N 411 RET C18 C N N 412 RET C19 C N N 413 RET C20 C N N 414 RET H21 H N N 415 RET H22 H N N 416 RET H31 H N N 417 RET H32 H N N 418 RET H41 H N N 419 RET H42 H N N 420 RET H7 H N N 421 RET H8 H N N 422 RET H10 H N N 423 RET H11 H N N 424 RET H12 H N N 425 RET H14 H N N 426 RET H15 H N N 427 RET H161 H N N 428 RET H162 H N N 429 RET H163 H N N 430 RET H171 H N N 431 RET H172 H N N 432 RET H173 H N N 433 RET H181 H N N 434 RET H182 H N N 435 RET H183 H N N 436 RET H191 H N N 437 RET H192 H N N 438 RET H193 H N N 439 RET H201 H N N 440 RET H202 H N N 441 RET H203 H N N 442 SER N N N N 443 SER CA C N S 444 SER C C N N 445 SER O O N N 446 SER CB C N N 447 SER OG O N N 448 SER OXT O N N 449 SER H H N N 450 SER H2 H N N 451 SER HA H N N 452 SER HB2 H N N 453 SER HB3 H N N 454 SER HG H N N 455 SER HXT H N N 456 THR N N N N 457 THR CA C N S 458 THR C C N N 459 THR O O N N 460 THR CB C N R 461 THR OG1 O N N 462 THR CG2 C N N 463 THR OXT O N N 464 THR H H N N 465 THR H2 H N N 466 THR HA H N N 467 THR HB H N N 468 THR HG1 H N N 469 THR HG21 H N N 470 THR HG22 H N N 471 THR HG23 H N N 472 THR HXT H N N 473 TRP N N N N 474 TRP CA C N S 475 TRP C C N N 476 TRP O O N N 477 TRP CB C N N 478 TRP CG C Y N 479 TRP CD1 C Y N 480 TRP CD2 C Y N 481 TRP NE1 N Y N 482 TRP CE2 C Y N 483 TRP CE3 C Y N 484 TRP CZ2 C Y N 485 TRP CZ3 C Y N 486 TRP CH2 C Y N 487 TRP OXT O N N 488 TRP H H N N 489 TRP H2 H N N 490 TRP HA H N N 491 TRP HB2 H N N 492 TRP HB3 H N N 493 TRP HD1 H N N 494 TRP HE1 H N N 495 TRP HE3 H N N 496 TRP HZ2 H N N 497 TRP HZ3 H N N 498 TRP HH2 H N N 499 TRP HXT H N N 500 TYR N N N N 501 TYR CA C N S 502 TYR C C N N 503 TYR O O N N 504 TYR CB C N N 505 TYR CG C Y N 506 TYR CD1 C Y N 507 TYR CD2 C Y N 508 TYR CE1 C Y N 509 TYR CE2 C Y N 510 TYR CZ C Y N 511 TYR OH O N N 512 TYR OXT O N N 513 TYR H H N N 514 TYR H2 H N N 515 TYR HA H N N 516 TYR HB2 H N N 517 TYR HB3 H N N 518 TYR HD1 H N N 519 TYR HD2 H N N 520 TYR HE1 H N N 521 TYR HE2 H N N 522 TYR HH H N N 523 TYR HXT H N N 524 VAL N N N N 525 VAL CA C N S 526 VAL C C N N 527 VAL O O N N 528 VAL CB C N N 529 VAL CG1 C N N 530 VAL CG2 C N N 531 VAL OXT O N N 532 VAL H H N N 533 VAL H2 H N N 534 VAL HA H N N 535 VAL HB H N N 536 VAL HG11 H N N 537 VAL HG12 H N N 538 VAL HG13 H N N 539 VAL HG21 H N N 540 VAL HG22 H N N 541 VAL HG23 H N N 542 VAL HXT H N N 543 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASP N CA sing N N 39 ASP N H sing N N 40 ASP N H2 sing N N 41 ASP CA C sing N N 42 ASP CA CB sing N N 43 ASP CA HA sing N N 44 ASP C O doub N N 45 ASP C OXT sing N N 46 ASP CB CG sing N N 47 ASP CB HB2 sing N N 48 ASP CB HB3 sing N N 49 ASP CG OD1 doub N N 50 ASP CG OD2 sing N N 51 ASP OD2 HD2 sing N N 52 ASP OXT HXT sing N N 53 CYS N CA sing N N 54 CYS N H sing N N 55 CYS N H2 sing N N 56 CYS CA C sing N N 57 CYS CA CB sing N N 58 CYS CA HA sing N N 59 CYS C O doub N N 60 CYS C OXT sing N N 61 CYS CB SG sing N N 62 CYS CB HB2 sing N N 63 CYS CB HB3 sing N N 64 CYS SG HG sing N N 65 CYS OXT HXT sing N N 66 GLN N CA sing N N 67 GLN N H sing N N 68 GLN N H2 sing N N 69 GLN CA C sing N N 70 GLN CA CB sing N N 71 GLN CA HA sing N N 72 GLN C O doub N N 73 GLN C OXT sing N N 74 GLN CB CG sing N N 75 GLN CB HB2 sing N N 76 GLN CB HB3 sing N N 77 GLN CG CD sing N N 78 GLN CG HG2 sing N N 79 GLN CG HG3 sing N N 80 GLN CD OE1 doub N N 81 GLN CD NE2 sing N N 82 GLN NE2 HE21 sing N N 83 GLN NE2 HE22 sing N N 84 GLN OXT HXT sing N N 85 GLU N CA sing N N 86 GLU N H sing N N 87 GLU N H2 sing N N 88 GLU CA C sing N N 89 GLU CA CB sing N N 90 GLU CA HA sing N N 91 GLU C O doub N N 92 GLU C OXT sing N N 93 GLU CB CG sing N N 94 GLU CB HB2 sing N N 95 GLU CB HB3 sing N N 96 GLU CG CD sing N N 97 GLU CG HG2 sing N N 98 GLU CG HG3 sing N N 99 GLU CD OE1 doub N N 100 GLU CD OE2 sing N N 101 GLU OE2 HE2 sing N N 102 GLU OXT HXT sing N N 103 GLY N CA sing N N 104 GLY N H sing N N 105 GLY N H2 sing N N 106 GLY CA C sing N N 107 GLY CA HA2 sing N N 108 GLY CA HA3 sing N N 109 GLY C O doub N N 110 GLY C OXT sing N N 111 GLY OXT HXT sing N N 112 HOH O H1 sing N N 113 HOH O H2 sing N N 114 ILE N CA sing N N 115 ILE N H sing N N 116 ILE N H2 sing N N 117 ILE CA C sing N N 118 ILE CA CB sing N N 119 ILE CA HA sing N N 120 ILE C O doub N N 121 ILE C OXT sing N N 122 ILE CB CG1 sing N N 123 ILE CB CG2 sing N N 124 ILE CB HB sing N N 125 ILE CG1 CD1 sing N N 126 ILE CG1 HG12 sing N N 127 ILE CG1 HG13 sing N N 128 ILE CG2 HG21 sing N N 129 ILE CG2 HG22 sing N N 130 ILE CG2 HG23 sing N N 131 ILE CD1 HD11 sing N N 132 ILE CD1 HD12 sing N N 133 ILE CD1 HD13 sing N N 134 ILE OXT HXT sing N N 135 LEU N CA sing N N 136 LEU N H sing N N 137 LEU N H2 sing N N 138 LEU CA C sing N N 139 LEU CA CB sing N N 140 LEU CA HA sing N N 141 LEU C O doub N N 142 LEU C OXT sing N N 143 LEU CB CG sing N N 144 LEU CB HB2 sing N N 145 LEU CB HB3 sing N N 146 LEU CG CD1 sing N N 147 LEU CG CD2 sing N N 148 LEU CG HG sing N N 149 LEU CD1 HD11 sing N N 150 LEU CD1 HD12 sing N N 151 LEU CD1 HD13 sing N N 152 LEU CD2 HD21 sing N N 153 LEU CD2 HD22 sing N N 154 LEU CD2 HD23 sing N N 155 LEU OXT HXT sing N N 156 LYS N CA sing N N 157 LYS N H sing N N 158 LYS N H2 sing N N 159 LYS CA C sing N N 160 LYS CA CB sing N N 161 LYS CA HA sing N N 162 LYS C O doub N N 163 LYS C OXT sing N N 164 LYS CB CG sing N N 165 LYS CB HB2 sing N N 166 LYS CB HB3 sing N N 167 LYS CG CD sing N N 168 LYS CG HG2 sing N N 169 LYS CG HG3 sing N N 170 LYS CD CE sing N N 171 LYS CD HD2 sing N N 172 LYS CD HD3 sing N N 173 LYS CE NZ sing N N 174 LYS CE HE2 sing N N 175 LYS CE HE3 sing N N 176 LYS NZ HZ1 sing N N 177 LYS NZ HZ2 sing N N 178 LYS NZ HZ3 sing N N 179 LYS OXT HXT sing N N 180 MET N CA sing N N 181 MET N H sing N N 182 MET N H2 sing N N 183 MET CA C sing N N 184 MET CA CB sing N N 185 MET CA HA sing N N 186 MET C O doub N N 187 MET C OXT sing N N 188 MET CB CG sing N N 189 MET CB HB2 sing N N 190 MET CB HB3 sing N N 191 MET CG SD sing N N 192 MET CG HG2 sing N N 193 MET CG HG3 sing N N 194 MET SD CE sing N N 195 MET CE HE1 sing N N 196 MET CE HE2 sing N N 197 MET CE HE3 sing N N 198 MET OXT HXT sing N N 199 PC1 O12 P sing N N 200 PC1 P O14 doub N N 201 PC1 P O13 sing N N 202 PC1 P O11 sing N N 203 PC1 O13 C11 sing N N 204 PC1 C11 C12 sing N N 205 PC1 C11 H111 sing N N 206 PC1 C11 H112 sing N N 207 PC1 C12 N sing N N 208 PC1 C12 H121 sing N N 209 PC1 C12 H122 sing N N 210 PC1 N C13 sing N N 211 PC1 N C14 sing N N 212 PC1 N C15 sing N N 213 PC1 C13 H131 sing N N 214 PC1 C13 H132 sing N N 215 PC1 C13 H133 sing N N 216 PC1 C14 H141 sing N N 217 PC1 C14 H142 sing N N 218 PC1 C14 H143 sing N N 219 PC1 C15 H151 sing N N 220 PC1 C15 H152 sing N N 221 PC1 C15 H153 sing N N 222 PC1 O11 C1 sing N N 223 PC1 C1 C2 sing N N 224 PC1 C1 H11 sing N N 225 PC1 C1 H12 sing N N 226 PC1 C2 O21 sing N N 227 PC1 C2 C3 sing N N 228 PC1 C2 H2 sing N N 229 PC1 O21 C21 sing N N 230 PC1 C21 O22 doub N N 231 PC1 C21 C22 sing N N 232 PC1 C22 C23 sing N N 233 PC1 C22 H221 sing N N 234 PC1 C22 H222 sing N N 235 PC1 C23 C24 sing N N 236 PC1 C23 H231 sing N N 237 PC1 C23 H232 sing N N 238 PC1 C24 C25 sing N N 239 PC1 C24 H241 sing N N 240 PC1 C24 H242 sing N N 241 PC1 C25 C26 sing N N 242 PC1 C25 H251 sing N N 243 PC1 C25 H252 sing N N 244 PC1 C26 C27 sing N N 245 PC1 C26 H261 sing N N 246 PC1 C26 H262 sing N N 247 PC1 C27 C28 sing N N 248 PC1 C27 H271 sing N N 249 PC1 C27 H272 sing N N 250 PC1 C28 C29 sing N N 251 PC1 C28 H281 sing N N 252 PC1 C28 H282 sing N N 253 PC1 C29 C2A sing N N 254 PC1 C29 H291 sing N N 255 PC1 C29 H292 sing N N 256 PC1 C2A C2B sing N N 257 PC1 C2A H2A1 sing N N 258 PC1 C2A H2A2 sing N N 259 PC1 C2B C2C sing N N 260 PC1 C2B H2B1 sing N N 261 PC1 C2B H2B2 sing N N 262 PC1 C2C C2D sing N N 263 PC1 C2C H2C1 sing N N 264 PC1 C2C H2C2 sing N N 265 PC1 C2D C2E sing N N 266 PC1 C2D H2D1 sing N N 267 PC1 C2D H2D2 sing N N 268 PC1 C2E C2F sing N N 269 PC1 C2E H2E1 sing N N 270 PC1 C2E H2E2 sing N N 271 PC1 C2F C2G sing N N 272 PC1 C2F H2F1 sing N N 273 PC1 C2F H2F2 sing N N 274 PC1 C2G C2H sing N N 275 PC1 C2G H2G1 sing N N 276 PC1 C2G H2G2 sing N N 277 PC1 C2H C2I sing N N 278 PC1 C2H H2H1 sing N N 279 PC1 C2H H2H2 sing N N 280 PC1 C2I H2I1 sing N N 281 PC1 C2I H2I2 sing N N 282 PC1 C2I H2I3 sing N N 283 PC1 C3 O31 sing N N 284 PC1 C3 H31 sing N N 285 PC1 C3 H32 sing N N 286 PC1 O31 C31 sing N N 287 PC1 C31 O32 doub N N 288 PC1 C31 C32 sing N N 289 PC1 C32 C33 sing N N 290 PC1 C32 H321 sing N N 291 PC1 C32 H322 sing N N 292 PC1 C33 C34 sing N N 293 PC1 C33 H331 sing N N 294 PC1 C33 H332 sing N N 295 PC1 C34 C35 sing N N 296 PC1 C34 H341 sing N N 297 PC1 C34 H342 sing N N 298 PC1 C35 C36 sing N N 299 PC1 C35 H351 sing N N 300 PC1 C35 H352 sing N N 301 PC1 C36 C37 sing N N 302 PC1 C36 H361 sing N N 303 PC1 C36 H362 sing N N 304 PC1 C37 C38 sing N N 305 PC1 C37 H371 sing N N 306 PC1 C37 H372 sing N N 307 PC1 C38 C39 sing N N 308 PC1 C38 H381 sing N N 309 PC1 C38 H382 sing N N 310 PC1 C39 C3A sing N N 311 PC1 C39 H391 sing N N 312 PC1 C39 H392 sing N N 313 PC1 C3A C3B sing N N 314 PC1 C3A H3A1 sing N N 315 PC1 C3A H3A2 sing N N 316 PC1 C3B C3C sing N N 317 PC1 C3B H3B1 sing N N 318 PC1 C3B H3B2 sing N N 319 PC1 C3C C3D sing N N 320 PC1 C3C H3C1 sing N N 321 PC1 C3C H3C2 sing N N 322 PC1 C3D C3E sing N N 323 PC1 C3D H3D1 sing N N 324 PC1 C3D H3D2 sing N N 325 PC1 C3E C3F sing N N 326 PC1 C3E H3E1 sing N N 327 PC1 C3E H3E2 sing N N 328 PC1 C3F C3G sing N N 329 PC1 C3F H3F1 sing N N 330 PC1 C3F H3F2 sing N N 331 PC1 C3G C3H sing N N 332 PC1 C3G H3G1 sing N N 333 PC1 C3G H3G2 sing N N 334 PC1 C3H C3I sing N N 335 PC1 C3H H3H1 sing N N 336 PC1 C3H H3H2 sing N N 337 PC1 C3I H3I1 sing N N 338 PC1 C3I H3I2 sing N N 339 PC1 C3I H3I3 sing N N 340 PHE N CA sing N N 341 PHE N H sing N N 342 PHE N H2 sing N N 343 PHE CA C sing N N 344 PHE CA CB sing N N 345 PHE CA HA sing N N 346 PHE C O doub N N 347 PHE C OXT sing N N 348 PHE CB CG sing N N 349 PHE CB HB2 sing N N 350 PHE CB HB3 sing N N 351 PHE CG CD1 doub Y N 352 PHE CG CD2 sing Y N 353 PHE CD1 CE1 sing Y N 354 PHE CD1 HD1 sing N N 355 PHE CD2 CE2 doub Y N 356 PHE CD2 HD2 sing N N 357 PHE CE1 CZ doub Y N 358 PHE CE1 HE1 sing N N 359 PHE CE2 CZ sing Y N 360 PHE CE2 HE2 sing N N 361 PHE CZ HZ sing N N 362 PHE OXT HXT sing N N 363 PRO N CA sing N N 364 PRO N CD sing N N 365 PRO N H sing N N 366 PRO CA C sing N N 367 PRO CA CB sing N N 368 PRO CA HA sing N N 369 PRO C O doub N N 370 PRO C OXT sing N N 371 PRO CB CG sing N N 372 PRO CB HB2 sing N N 373 PRO CB HB3 sing N N 374 PRO CG CD sing N N 375 PRO CG HG2 sing N N 376 PRO CG HG3 sing N N 377 PRO CD HD2 sing N N 378 PRO CD HD3 sing N N 379 PRO OXT HXT sing N N 380 RET C1 C2 sing N N 381 RET C1 C6 sing N N 382 RET C1 C16 sing N N 383 RET C1 C17 sing N N 384 RET C2 C3 sing N N 385 RET C2 H21 sing N N 386 RET C2 H22 sing N N 387 RET C3 C4 sing N N 388 RET C3 H31 sing N N 389 RET C3 H32 sing N N 390 RET C4 C5 sing N N 391 RET C4 H41 sing N N 392 RET C4 H42 sing N N 393 RET C5 C6 doub N N 394 RET C5 C18 sing N N 395 RET C6 C7 sing N N 396 RET C7 C8 doub N E 397 RET C7 H7 sing N N 398 RET C8 C9 sing N N 399 RET C8 H8 sing N N 400 RET C9 C10 doub N E 401 RET C9 C19 sing N N 402 RET C10 C11 sing N N 403 RET C10 H10 sing N N 404 RET C11 C12 doub N E 405 RET C11 H11 sing N N 406 RET C12 C13 sing N N 407 RET C12 H12 sing N N 408 RET C13 C14 doub N E 409 RET C13 C20 sing N N 410 RET C14 C15 sing N N 411 RET C14 H14 sing N N 412 RET C15 O1 doub N N 413 RET C15 H15 sing N N 414 RET C16 H161 sing N N 415 RET C16 H162 sing N N 416 RET C16 H163 sing N N 417 RET C17 H171 sing N N 418 RET C17 H172 sing N N 419 RET C17 H173 sing N N 420 RET C18 H181 sing N N 421 RET C18 H182 sing N N 422 RET C18 H183 sing N N 423 RET C19 H191 sing N N 424 RET C19 H192 sing N N 425 RET C19 H193 sing N N 426 RET C20 H201 sing N N 427 RET C20 H202 sing N N 428 RET C20 H203 sing N N 429 SER N CA sing N N 430 SER N H sing N N 431 SER N H2 sing N N 432 SER CA C sing N N 433 SER CA CB sing N N 434 SER CA HA sing N N 435 SER C O doub N N 436 SER C OXT sing N N 437 SER CB OG sing N N 438 SER CB HB2 sing N N 439 SER CB HB3 sing N N 440 SER OG HG sing N N 441 SER OXT HXT sing N N 442 THR N CA sing N N 443 THR N H sing N N 444 THR N H2 sing N N 445 THR CA C sing N N 446 THR CA CB sing N N 447 THR CA HA sing N N 448 THR C O doub N N 449 THR C OXT sing N N 450 THR CB OG1 sing N N 451 THR CB CG2 sing N N 452 THR CB HB sing N N 453 THR OG1 HG1 sing N N 454 THR CG2 HG21 sing N N 455 THR CG2 HG22 sing N N 456 THR CG2 HG23 sing N N 457 THR OXT HXT sing N N 458 TRP N CA sing N N 459 TRP N H sing N N 460 TRP N H2 sing N N 461 TRP CA C sing N N 462 TRP CA CB sing N N 463 TRP CA HA sing N N 464 TRP C O doub N N 465 TRP C OXT sing N N 466 TRP CB CG sing N N 467 TRP CB HB2 sing N N 468 TRP CB HB3 sing N N 469 TRP CG CD1 doub Y N 470 TRP CG CD2 sing Y N 471 TRP CD1 NE1 sing Y N 472 TRP CD1 HD1 sing N N 473 TRP CD2 CE2 doub Y N 474 TRP CD2 CE3 sing Y N 475 TRP NE1 CE2 sing Y N 476 TRP NE1 HE1 sing N N 477 TRP CE2 CZ2 sing Y N 478 TRP CE3 CZ3 doub Y N 479 TRP CE3 HE3 sing N N 480 TRP CZ2 CH2 doub Y N 481 TRP CZ2 HZ2 sing N N 482 TRP CZ3 CH2 sing Y N 483 TRP CZ3 HZ3 sing N N 484 TRP CH2 HH2 sing N N 485 TRP OXT HXT sing N N 486 TYR N CA sing N N 487 TYR N H sing N N 488 TYR N H2 sing N N 489 TYR CA C sing N N 490 TYR CA CB sing N N 491 TYR CA HA sing N N 492 TYR C O doub N N 493 TYR C OXT sing N N 494 TYR CB CG sing N N 495 TYR CB HB2 sing N N 496 TYR CB HB3 sing N N 497 TYR CG CD1 doub Y N 498 TYR CG CD2 sing Y N 499 TYR CD1 CE1 sing Y N 500 TYR CD1 HD1 sing N N 501 TYR CD2 CE2 doub Y N 502 TYR CD2 HD2 sing N N 503 TYR CE1 CZ doub Y N 504 TYR CE1 HE1 sing N N 505 TYR CE2 CZ sing Y N 506 TYR CE2 HE2 sing N N 507 TYR CZ OH sing N N 508 TYR OH HH sing N N 509 TYR OXT HXT sing N N 510 VAL N CA sing N N 511 VAL N H sing N N 512 VAL N H2 sing N N 513 VAL CA C sing N N 514 VAL CA CB sing N N 515 VAL CA HA sing N N 516 VAL C O doub N N 517 VAL C OXT sing N N 518 VAL CB CG1 sing N N 519 VAL CB CG2 sing N N 520 VAL CB HB sing N N 521 VAL CG1 HG11 sing N N 522 VAL CG1 HG12 sing N N 523 VAL CG1 HG13 sing N N 524 VAL CG2 HG21 sing N N 525 VAL CG2 HG22 sing N N 526 VAL CG2 HG23 sing N N 527 VAL OXT HXT sing N N 528 # _em_admin.current_status REL _em_admin.deposition_date 2025-12-09 _em_admin.deposition_site PDBJ _em_admin.entry_id 21DF _em_admin.last_update 2026-11-11 _em_admin.map_release_date 2026-11-11 _em_admin.title 'MtSzR methanogenic Schizorhodopsin' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 1 _em_entity_assembly_naturalsource.ncbi_tax_id 1550565 _em_entity_assembly_naturalsource.organism 'Methanoculleus taiwanensis' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 1 _em_entity_assembly_recombinant.ncbi_tax_id 562 _em_entity_assembly_recombinant.organism 'Escherichia coli' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 50 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version _em_software.reference_DOI 'PARTICLE SELECTION' ? 1 1 ? ? cryoSPARC 3.3.2 ? 'MODEL REFINEMENT' ? 2 ? ? ? PHENIX 1.19_4092 ? 'IMAGE ACQUISITION' ? 3 ? ? 1 ? ? ? MASKING ? 4 ? ? ? ? ? ? 'CTF CORRECTION' ? 5 1 ? ? ? ? ? 'LAYERLINE INDEXING' ? 6 ? ? ? ? ? ? 'DIFFRACTION INDEXING' ? 7 ? ? ? ? ? ? 'MODEL FITTING' ? 8 ? ? ? ? ? ? OTHER ? 9 ? ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? ? CLASSIFICATION ? 12 1 ? ? ? ? ? RECONSTRUCTION ? 13 1 ? ? cryoSPARC 3.3.2 ? 'VOLUME SELECTION' ? 14 1 1 1 ? ? ? 'SERIES ALIGNMENT' ? 15 1 1 1 ? ? ? 'MOLECULAR REPLACEMENT' ? 16 1 1 1 ? ? ? 'LATTICE DISTORTION CORRECTION' ? 17 1 1 1 ? ? ? 'SYMMETRY DETERMINATION' ? 18 1 1 1 ? ? ? 'CRYSTALLOGRAPHY MERGING' ? 19 1 1 1 ? ? ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Japan Society for the Promotion of Science (JSPS)' Japan 24K23232 1 'Japan Society for the Promotion of Science (JSPS)' Japan 24KJ0909 2 'Japan Society for the Promotion of Science (JSPS)' Japan 24K23073 3 'Japan Society for the Promotion of Science (JSPS)' Japan 23K05007 4 'Japan Society for the Promotion of Science (JSPS)' Japan 22K19371 5 'Japan Society for the Promotion of Science (JSPS)' Japan 23K24014 6 'Japan Society for the Promotion of Science (JSPS)' Japan 25K02397 7 'Japan Society for the Promotion of Science (JSPS)' Japan 24H02268 8 'Japan Society for the Promotion of Science (JSPS)' Japan 25H00424 9 'Japan Society for the Promotion of Science (JSPS)' Japan 21H05037 10 'Japan Agency for Medical Research and Development (AMED)' Japan JP233fa627001 11 'Japan Agency for Medical Research and Development (AMED)' Japan JP24ama121002 12 'Japan Agency for Medical Research and Development (AMED)' Japan JP24ama121012 13 # _atom_sites.entry_id 21DF _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O P S # loop_ #