HEADER RNA 16-JAN-26 22MZ TITLE CRYSTAL STRUCTURE OF A VARIANT C-DI-GMP-II RIBOSWITCH C-DI-GMP-II-BH TITLE 2 BOUND WITH 3',3'-CGAMP COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNA (76-MER); COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HALALKALIBACTERIUM HALODURANS C-125; SOURCE 3 ORGANISM_TAXID: 272558; SOURCE 4 EXPRESSION_SYSTEM: IN VITRO TRANSCRIPTION VECTOR PT7-TP(DELTAI); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 905931 KEYWDS RNA, RIBOSWITCH, 3', 3'-CGAMP EXPDTA X-RAY DIFFRACTION AUTHOR X.C.XU,A.M.REN REVDAT 1 21-OCT-26 22MZ 0 JRNL AUTH X.C.XU,A.M.REN JRNL TITL CRYSTAL STRUCTURE OF A VARIANT C-DI-GMP-II RIBOSWITCH JRNL TITL 2 BHP1-5DELC BOUND WITH 3',3'-CGAMP JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.18.2_3874: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.16 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 25769 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.221 REMARK 3 R VALUE (WORKING SET) : 0.219 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.970 REMARK 3 FREE R VALUE TEST SET COUNT : 1281 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.1600 - 3.5400 0.99 2927 153 0.1694 0.1949 REMARK 3 2 3.5400 - 2.8100 0.99 2757 138 0.2142 0.2432 REMARK 3 3 2.8100 - 2.4500 1.00 2763 153 0.2879 0.3441 REMARK 3 4 2.4500 - 2.2300 1.00 2715 135 0.2751 0.3310 REMARK 3 5 2.2300 - 2.0700 1.00 2734 138 0.2819 0.3069 REMARK 3 6 2.0700 - 1.9500 1.00 2673 166 0.2819 0.3512 REMARK 3 7 1.9500 - 1.8500 1.00 2710 141 0.2929 0.3584 REMARK 3 8 1.8500 - 1.7700 0.99 2670 139 0.3195 0.3712 REMARK 3 9 1.7700 - 1.7000 0.95 2539 118 0.3560 0.3766 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.990 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 1969 REMARK 3 ANGLE : 1.336 3069 REMARK 3 CHIRALITY : 0.059 410 REMARK 3 PLANARITY : 0.009 88 REMARK 3 DIHEDRAL : 15.289 1035 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 22MZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 23-JAN-26. REMARK 100 THE DEPOSITION ID IS D_1300068812. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-MAR-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL18U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97852 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25769 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 12.20 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 50.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.80 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M MG(COOH)2, 20% PEG 3350, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 15.31050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 92.47700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 20.03250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 92.47700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 15.31050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 20.03250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 130 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13310 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 229 O HOH A 241 1.98 REMARK 500 O HOH A 268 O HOH A 292 2.15 REMARK 500 O HOH A 201 O HOH A 264 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 272 O HOH A 301 3544 1.95 REMARK 500 O HOH A 301 O HOH A 306 3554 2.07 REMARK 500 O HOH A 306 O HOH A 318 3544 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 G A 23 O5' - P - OP2 ANGL. DEV. = -6.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 110 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G A 33 N7 REMARK 620 2 HOH A 208 O 77.3 REMARK 620 3 HOH A 221 O 88.9 99.0 REMARK 620 4 HOH A 269 O 88.2 95.5 164.2 REMARK 620 5 HOH A 302 O 178.6 103.7 90.0 92.7 REMARK 620 6 HOH A 304 O 102.3 173.4 87.5 77.9 76.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 105 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 U A 55 OP1 REMARK 620 2 HOH A 218 O 163.6 REMARK 620 3 HOH A 220 O 85.7 79.1 REMARK 620 4 HOH A 253 O 95.2 92.4 96.1 REMARK 620 5 HOH A 290 O 85.3 86.1 80.1 176.1 REMARK 620 6 HOH A 293 O 97.8 96.6 171.8 91.0 92.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 106 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 A A 56 OP2 REMARK 620 2 HOH A 226 O 81.1 REMARK 620 3 HOH A 231 O 95.7 79.4 REMARK 620 4 HOH A 262 O 177.8 96.7 83.8 REMARK 620 5 HOH A 280 O 97.6 97.6 165.7 82.7 REMARK 620 6 HOH A 284 O 90.5 171.2 99.1 91.7 86.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 108 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 A A 56 OP1 REMARK 620 2 C A 57 OP2 92.0 REMARK 620 3 U A 58 O4 92.8 95.7 REMARK 620 4 HOH A 236 O 173.9 88.3 81.1 REMARK 620 5 HOH A 259 O 92.0 88.3 173.6 94.2 REMARK 620 6 HOH A 275 O 85.8 175.8 88.0 94.2 88.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 113 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 C A 76 O3' REMARK 620 2 HOH A 201 O 69.4 REMARK 620 3 HOH A 264 O 94.9 71.2 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 104 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 4BW A 102 NAR REMARK 620 2 4BW A 103 NAR 118.9 REMARK 620 3 HOH A 203 O 82.8 153.8 REMARK 620 4 HOH A 217 O 90.0 34.5 171.6 REMARK 620 5 HOH A 256 O 168.8 70.1 90.6 95.8 REMARK 620 6 HOH A 298 O 96.2 73.0 91.2 93.8 92.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 107 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 204 O REMARK 620 2 HOH A 246 O 76.3 REMARK 620 3 HOH A 254 O 70.1 95.6 REMARK 620 4 HOH A 310 O 168.4 101.6 99.0 REMARK 620 5 HOH A 313 O 96.4 172.5 80.1 85.2 REMARK 620 6 HOH A 317 O 95.4 98.6 156.7 96.2 83.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 109 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 214 O REMARK 620 2 HOH A 216 O 85.9 REMARK 620 3 HOH A 300 O 85.9 84.8 REMARK 620 4 HOH A 314 O 97.3 176.8 94.7 REMARK 620 5 HOH A 316 O 93.0 93.6 178.1 86.9 REMARK 620 6 HOH A 319 O 173.9 88.3 91.8 88.5 89.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 111 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 251 O REMARK 620 2 HOH A 273 O 83.2 REMARK 620 3 HOH A 305 O 156.5 86.6 REMARK 620 4 HOH A 307 O 90.6 152.0 88.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 112 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 202 O REMARK 620 2 HOH A 207 O 96.8 REMARK 620 3 HOH A 215 O 83.6 176.3 REMARK 620 4 HOH A 233 O 75.4 108.8 74.8 REMARK 620 5 HOH A 252 O 173.3 76.5 103.1 105.6 REMARK 620 6 HOH A 312 O 86.4 72.3 104.1 161.8 92.4 REMARK 620 N 1 2 3 4 5 DBREF1 22MZ A 3 74 GB BA000004.3 DBREF2 22MZ A 47118318 387924 387995 SEQADV 22MZ G A 1 GB 47118318 EXPRESSION TAG SEQADV 22MZ G A 2 GB 47118318 EXPRESSION TAG SEQADV 22MZ U A 75 GB 47118318 EXPRESSION TAG SEQADV 22MZ C A 76 GB 47118318 EXPRESSION TAG SEQRES 1 A 76 G G U A G G G A A G C A A SEQRES 2 A 76 C G A A G C A U A G C C U SEQRES 3 A 76 U U A U A U G G A C A C U SEQRES 4 A 76 U G G G U U A U G U G G A SEQRES 5 A 76 G C U A C U A G U G U A A SEQRES 6 A 76 C C G G C C C U C U C HET 4BW A 101 45 HET 4BW A 102 45 HET 4BW A 103 45 HET MG A 104 1 HET MG A 105 1 HET MG A 106 1 HET MG A 107 1 HET MG A 108 1 HET MG A 109 1 HET MG A 110 1 HET MG A 111 1 HET MG A 112 1 HET MG A 113 1 HETNAM 4BW 2-AMINO-9-[(2R,3R,3AS,5R,7AR,9R,10R,10AS,12R,14AR)-9- HETNAM 2 4BW (6-AMINO-9H-PURIN-9-YL)-3,5,10,12-TETRAHYDROXY-5,12- HETNAM 3 4BW DIOXIDOOCTAHYDRO-2H,7H-DIFURO[3,2-D:3',2'-J][1,3,7,9, HETNAM 4 4BW 2,8]TETRAOXADIPHOSPHACYCLODODECIN-2-YL]-1,9-DIHYDRO- HETNAM 5 4BW 6H-PURIN-6-ONE HETNAM MG MAGNESIUM ION HETSYN 4BW 3',3' CGAMP; C-GMP-AMP; C[G(3',5')PA(3',5')P] FORMUL 2 4BW 3(C20 H24 N10 O13 P2) FORMUL 5 MG 10(MG 2+) FORMUL 15 HOH *119(H2 O) LINK N7 G A 33 MG MG A 110 1555 1555 2.51 LINK OP1 U A 55 MG MG A 105 1555 1555 2.28 LINK OP2 A A 56 MG MG A 106 1555 1555 2.09 LINK OP1 A A 56 MG MG A 108 1555 1555 2.08 LINK OP2 C A 57 MG MG A 108 1555 1555 1.95 LINK O4 U A 58 MG MG A 108 1555 1555 2.03 LINK O3' C A 76 MG MG A 113 1555 1555 2.01 LINK NAR 4BW A 102 MG MG A 104 1555 1555 2.35 LINK NAR 4BW A 103 MG MG A 104 1555 3554 2.32 LINK MG MG A 104 O HOH A 203 1555 1555 2.20 LINK MG MG A 104 O HOH A 217 1555 3544 1.99 LINK MG MG A 104 O HOH A 256 1555 1555 2.06 LINK MG MG A 104 O HOH A 298 1555 1555 1.99 LINK MG MG A 105 O HOH A 218 1555 1555 2.24 LINK MG MG A 105 O HOH A 220 1555 1555 2.28 LINK MG MG A 105 O HOH A 253 1555 1555 2.04 LINK MG MG A 105 O HOH A 290 1555 1555 2.23 LINK MG MG A 105 O HOH A 293 1555 1555 1.97 LINK MG MG A 106 O HOH A 226 1555 1555 2.22 LINK MG MG A 106 O HOH A 231 1555 1555 2.11 LINK MG MG A 106 O HOH A 262 1555 1555 1.96 LINK MG MG A 106 O HOH A 280 1555 1555 2.11 LINK MG MG A 106 O HOH A 284 1555 1555 2.10 LINK MG MG A 107 O HOH A 204 1555 1555 2.26 LINK MG MG A 107 O HOH A 246 1555 1555 1.93 LINK MG MG A 107 O HOH A 254 1555 1555 2.16 LINK MG MG A 107 O HOH A 310 1555 1555 1.95 LINK MG MG A 107 O HOH A 313 1555 1555 2.04 LINK MG MG A 107 O HOH A 317 1555 1555 1.94 LINK MG MG A 108 O HOH A 236 1555 1555 2.08 LINK MG MG A 108 O HOH A 259 1555 1555 2.05 LINK MG MG A 108 O HOH A 275 1555 1555 2.22 LINK MG MG A 109 O HOH A 214 1555 1555 2.17 LINK MG MG A 109 O HOH A 216 1555 1555 2.44 LINK MG MG A 109 O HOH A 300 1555 1555 2.02 LINK MG MG A 109 O HOH A 314 1555 1555 2.20 LINK MG MG A 109 O HOH A 316 1555 1555 2.26 LINK MG MG A 109 O HOH A 319 1555 1555 2.16 LINK MG MG A 110 O HOH A 208 1555 1555 2.23 LINK MG MG A 110 O HOH A 221 1555 1555 2.09 LINK MG MG A 110 O HOH A 269 1555 1555 2.16 LINK MG MG A 110 O HOH A 302 1555 1555 2.69 LINK MG MG A 110 O HOH A 304 1555 1555 2.23 LINK MG MG A 111 O HOH A 251 1555 1555 2.39 LINK MG MG A 111 O HOH A 273 1555 1555 2.32 LINK MG MG A 111 O HOH A 305 1555 1555 1.94 LINK MG MG A 111 O HOH A 307 1555 1555 1.98 LINK MG MG A 112 O HOH A 202 1555 1555 2.24 LINK MG MG A 112 O HOH A 207 1555 1555 2.40 LINK MG MG A 112 O HOH A 215 1555 1555 2.19 LINK MG MG A 112 O HOH A 233 1555 1555 2.27 LINK MG MG A 112 O HOH A 252 1555 1555 2.42 LINK MG MG A 112 O HOH A 312 1555 1555 2.19 LINK MG MG A 113 O HOH A 201 1555 1555 1.95 LINK MG MG A 113 O HOH A 264 1555 1555 1.80 CRYST1 30.621 40.065 184.954 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.032657 0.000000 0.000000 0.00000 SCALE2 0.000000 0.024959 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005407 0.00000 CONECT 704 1767 CONECT 1166 1762 CONECT 1186 1765 CONECT 1187 1763 CONECT 1209 1765 CONECT 1244 1765 CONECT 1613 1770 CONECT 1626 1627 CONECT 1627 1626 1628 1633 CONECT 1628 1627 1629 CONECT 1629 1628 1630 1631 CONECT 1630 1629 CONECT 1631 1629 1632 CONECT 1632 1631 1633 1636 CONECT 1633 1627 1632 1634 CONECT 1634 1633 1635 CONECT 1635 1634 1636 CONECT 1636 1632 1635 1637 CONECT 1637 1636 1638 1640 CONECT 1638 1637 1639 1648 CONECT 1639 1638 CONECT 1640 1637 1641 CONECT 1641 1640 1642 1648 CONECT 1642 1641 1643 CONECT 1643 1642 1644 CONECT 1644 1643 1645 1646 1647 CONECT 1645 1644 1657 CONECT 1646 1644 CONECT 1647 1644 CONECT 1648 1638 1641 1649 CONECT 1649 1648 1650 CONECT 1650 1649 1651 1652 1653 CONECT 1651 1650 CONECT 1652 1650 CONECT 1653 1650 1654 CONECT 1654 1653 1655 CONECT 1655 1654 1656 1657 CONECT 1656 1655 1660 CONECT 1657 1645 1655 1658 CONECT 1658 1657 1659 1660 CONECT 1659 1658 CONECT 1660 1656 1658 1661 CONECT 1661 1660 1662 1665 CONECT 1662 1661 1663 CONECT 1663 1662 1664 CONECT 1664 1663 1665 1669 CONECT 1665 1661 1664 1666 CONECT 1666 1665 1667 CONECT 1667 1666 1668 CONECT 1668 1667 1669 CONECT 1669 1664 1668 1670 CONECT 1670 1669 CONECT 1671 1672 CONECT 1672 1671 1673 1678 CONECT 1673 1672 1674 CONECT 1674 1673 1675 1676 CONECT 1675 1674 CONECT 1676 1674 1677 CONECT 1677 1676 1678 1681 CONECT 1678 1672 1677 1679 CONECT 1679 1678 1680 1761 CONECT 1680 1679 1681 CONECT 1681 1677 1680 1682 CONECT 1682 1681 1683 1685 CONECT 1683 1682 1684 1693 CONECT 1684 1683 CONECT 1685 1682 1686 CONECT 1686 1685 1687 1693 CONECT 1687 1686 1688 CONECT 1688 1687 1689 CONECT 1689 1688 1690 1691 1692 CONECT 1690 1689 1702 CONECT 1691 1689 CONECT 1692 1689 CONECT 1693 1683 1686 1694 CONECT 1694 1693 1695 CONECT 1695 1694 1696 1697 1698 CONECT 1696 1695 CONECT 1697 1695 CONECT 1698 1695 1699 CONECT 1699 1698 1700 CONECT 1700 1699 1701 1702 CONECT 1701 1700 1705 CONECT 1702 1690 1700 1703 CONECT 1703 1702 1704 1705 CONECT 1704 1703 CONECT 1705 1701 1703 1706 CONECT 1706 1705 1707 1710 CONECT 1707 1706 1708 CONECT 1708 1707 1709 CONECT 1709 1708 1710 1714 CONECT 1710 1706 1709 1711 CONECT 1711 1710 1712 CONECT 1712 1711 1713 CONECT 1713 1712 1714 CONECT 1714 1709 1713 1715 CONECT 1715 1714 CONECT 1716 1717 CONECT 1717 1716 1718 1723 CONECT 1718 1717 1719 CONECT 1719 1718 1720 1721 CONECT 1720 1719 CONECT 1721 1719 1722 CONECT 1722 1721 1723 1726 CONECT 1723 1717 1722 1724 CONECT 1724 1723 1725 CONECT 1725 1724 1726 CONECT 1726 1722 1725 1727 CONECT 1727 1726 1728 1730 CONECT 1728 1727 1729 1738 CONECT 1729 1728 CONECT 1730 1727 1731 CONECT 1731 1730 1732 1738 CONECT 1732 1731 1733 CONECT 1733 1732 1734 CONECT 1734 1733 1735 1736 1737 CONECT 1735 1734 1747 CONECT 1736 1734 CONECT 1737 1734 CONECT 1738 1728 1731 1739 CONECT 1739 1738 1740 CONECT 1740 1739 1741 1742 1743 CONECT 1741 1740 CONECT 1742 1740 CONECT 1743 1740 1744 CONECT 1744 1743 1745 CONECT 1745 1744 1746 1747 CONECT 1746 1745 1750 CONECT 1747 1735 1745 1748 CONECT 1748 1747 1749 1750 CONECT 1749 1748 CONECT 1750 1746 1748 1751 CONECT 1751 1750 1752 1755 CONECT 1752 1751 1753 CONECT 1753 1752 1754 CONECT 1754 1753 1755 1759 CONECT 1755 1751 1754 1756 CONECT 1756 1755 1757 CONECT 1757 1756 1758 CONECT 1758 1757 1759 CONECT 1759 1754 1758 1760 CONECT 1760 1759 CONECT 1761 1679 1773 1826 1868 CONECT 1762 1166 1788 1790 1823 CONECT 1762 1860 1863 CONECT 1763 1187 1796 1801 1832 CONECT 1763 1850 1854 CONECT 1764 1774 1816 1824 1880 CONECT 1764 1883 1887 CONECT 1765 1186 1209 1244 1806 CONECT 1765 1829 1845 CONECT 1766 1784 1786 1870 1884 CONECT 1766 1886 1889 CONECT 1767 704 1778 1791 1839 CONECT 1767 1872 1874 CONECT 1768 1821 1843 1875 1877 CONECT 1769 1772 1777 1785 1803 CONECT 1769 1822 1882 CONECT 1770 1613 1771 1834 CONECT 1771 1770 CONECT 1772 1769 CONECT 1773 1761 CONECT 1774 1764 CONECT 1777 1769 CONECT 1778 1767 CONECT 1784 1766 CONECT 1785 1769 CONECT 1786 1766 CONECT 1788 1762 CONECT 1790 1762 CONECT 1791 1767 CONECT 1796 1763 CONECT 1801 1763 CONECT 1803 1769 CONECT 1806 1765 CONECT 1816 1764 CONECT 1821 1768 CONECT 1822 1769 CONECT 1823 1762 CONECT 1824 1764 CONECT 1826 1761 CONECT 1829 1765 CONECT 1832 1763 CONECT 1834 1770 CONECT 1839 1767 CONECT 1843 1768 CONECT 1845 1765 CONECT 1850 1763 CONECT 1854 1763 CONECT 1860 1762 CONECT 1863 1762 CONECT 1868 1761 CONECT 1870 1766 CONECT 1872 1767 CONECT 1874 1767 CONECT 1875 1768 CONECT 1877 1768 CONECT 1880 1764 CONECT 1882 1769 CONECT 1883 1764 CONECT 1884 1766 CONECT 1886 1766 CONECT 1887 1764 CONECT 1889 1766 MASTER 361 0 13 0 0 0 0 6 1888 1 204 6 END