HEADER TRANSPORT PROTEIN 27-JAN-26 22XR TITLE STRUCTURE OF FULL PERMEASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PTS SYSTEM MANNITOL-SPECIFIC EIICBA COMPONENT; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: EIICBA-MTL,EII-MTL; COMPND 5 EC: 2.7.1.197; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI K-12; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 GENE: MTLA, B3599, JW3573; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS COMPLEX, FULL LENGTH, NUTRIENT, DRUG TARGET, TRANSPORT PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR Z.JINRU,Z.JINRU REVDAT 1 04-NOV-26 22XR 0 JRNL AUTH Z.JINRU,Z.JINRU JRNL TITL STRUCTURE OF FULL PERMEASE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.88 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : CRYOSPARC, PHENIX, CRYOSPARC REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.880 REMARK 3 NUMBER OF PARTICLES : 297409 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 22XR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBC ON 02-FEB-26. REMARK 100 THE DEPOSITION ID IS D_1300062910. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : FULL LENGTH PERMASE REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.00 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS KRIOS REMARK 245 DETECTOR TYPE : FEI FALCON IV (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1000.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 1500.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 3000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 340 REMARK 465 GLU A 341 REMARK 465 GLU A 342 REMARK 465 ASP A 343 REMARK 465 ASP A 344 REMARK 465 ILE A 345 REMARK 465 GLU A 346 REMARK 465 ALA A 347 REMARK 465 ALA A 348 REMARK 465 THR A 349 REMARK 465 ARG A 350 REMARK 465 ARG A 351 REMARK 465 MET A 352 REMARK 465 GLN A 353 REMARK 465 ASP A 354 REMARK 465 MET A 355 REMARK 465 LYS A 356 REMARK 465 ALA A 357 REMARK 465 GLU A 358 REMARK 465 SER A 359 REMARK 465 LYS A 360 REMARK 465 GLY A 361 REMARK 465 ALA A 362 REMARK 465 LYS B 340 REMARK 465 GLU B 341 REMARK 465 GLU B 342 REMARK 465 ASP B 343 REMARK 465 ASP B 344 REMARK 465 ILE B 345 REMARK 465 GLU B 346 REMARK 465 ALA B 347 REMARK 465 ALA B 348 REMARK 465 THR B 349 REMARK 465 ARG B 350 REMARK 465 ARG B 351 REMARK 465 MET B 352 REMARK 465 GLN B 353 REMARK 465 ASP B 354 REMARK 465 MET B 355 REMARK 465 LYS B 356 REMARK 465 ALA B 357 REMARK 465 GLU B 358 REMARK 465 SER B 359 REMARK 465 LYS B 360 REMARK 465 GLY B 361 REMARK 465 ALA B 362 REMARK 465 ARG B 636 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 481 OG REMARK 470 LEU A 482 CG CD1 CD2 REMARK 470 LYS A 483 CG CD CE NZ REMARK 470 ASP A 484 CG OD1 OD2 REMARK 470 SER A 485 OG REMARK 470 PHE A 486 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASP A 487 CG OD1 OD2 REMARK 470 ASP A 488 CG OD1 OD2 REMARK 470 SER A 489 OG REMARK 470 SER A 490 OG REMARK 470 ASN A 492 CG OD1 ND2 REMARK 470 LEU A 493 CG CD1 CD2 REMARK 470 PHE A 494 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 495 CG CD CE NZ REMARK 470 LEU A 496 CG CD1 CD2 REMARK 470 GLU A 499 CG CD OE1 OE2 REMARK 470 ASN A 500 CG OD1 ND2 REMARK 470 ILE A 501 CG1 CG2 CD1 REMARK 470 PHE A 502 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LEU A 503 CG CD1 CD2 REMARK 470 ARG A 505 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 506 CG CD CE NZ REMARK 470 THR A 509 OG1 CG2 REMARK 470 LYS A 510 CG CD CE NZ REMARK 470 GLU A 511 CG CD OE1 OE2 REMARK 470 GLU A 512 CG CD OE1 OE2 REMARK 470 ILE A 514 CG1 CG2 CD1 REMARK 470 ARG A 515 CG CD NE CZ NH1 NH2 REMARK 470 PHE A 516 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU A 519 CG CD OE1 OE2 REMARK 470 GLN A 520 CG CD OE1 NE2 REMARK 470 LEU A 521 CG CD1 CD2 REMARK 470 VAL A 522 CG1 CG2 REMARK 470 LYS A 523 CG CD CE NZ REMARK 470 TYR A 526 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 VAL A 527 CG1 CG2 REMARK 470 GLU A 528 CG CD OE1 OE2 REMARK 470 PRO A 529 CG CD REMARK 470 GLU A 530 CG CD OE1 OE2 REMARK 470 TYR A 531 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 VAL A 532 CG1 CG2 REMARK 470 GLN A 533 CG CD OE1 NE2 REMARK 470 MET A 535 CG SD CE REMARK 470 LEU A 536 CG CD1 CD2 REMARK 470 ASP A 537 CG OD1 OD2 REMARK 470 ARG A 538 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 539 CG CD OE1 OE2 REMARK 470 LYS A 540 CG CD CE NZ REMARK 470 LEU A 541 CG CD1 CD2 REMARK 470 THR A 542 OG1 CG2 REMARK 470 PRO A 543 CG CD REMARK 470 THR A 544 OG1 CG2 REMARK 470 TYR A 545 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LEU A 546 CG CD1 CD2 REMARK 470 GLU A 548 CG CD OE1 OE2 REMARK 470 SER A 549 OG REMARK 470 ILE A 550 CG1 CG2 CD1 REMARK 470 VAL A 552 CG1 CG2 REMARK 470 PRO A 553 CG CD REMARK 470 HIS A 554 CG ND1 CD2 CE1 NE2 REMARK 470 THR A 556 OG1 CG2 REMARK 470 VAL A 557 CG1 CG2 REMARK 470 GLU A 558 CG CD OE1 OE2 REMARK 470 LYS A 560 CG CD CE NZ REMARK 470 ASP A 561 CG OD1 OD2 REMARK 470 ARG A 562 CG CD NE CZ NH1 NH2 REMARK 470 VAL A 563 CG1 CG2 REMARK 470 LEU A 564 CG CD1 CD2 REMARK 470 LYS A 565 CG CD CE NZ REMARK 470 THR A 566 OG1 CG2 REMARK 470 VAL A 568 CG1 CG2 REMARK 470 VAL A 569 CG1 CG2 REMARK 470 PHE A 570 CG CD1 CD2 CE1 CE2 CZ REMARK 470 CYS A 571 SG REMARK 470 GLN A 572 CG CD OE1 NE2 REMARK 470 TYR A 573 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 PRO A 574 CG CD REMARK 470 GLU A 575 CG CD OE1 OE2 REMARK 470 VAL A 577 CG1 CG2 REMARK 470 ARG A 578 CG CD NE CZ NH1 NH2 REMARK 470 PHE A 579 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU A 581 CG CD OE1 OE2 REMARK 470 GLU A 582 CG CD OE1 OE2 REMARK 470 GLU A 583 CG CD OE1 OE2 REMARK 470 ASP A 584 CG OD1 OD2 REMARK 470 ASP A 585 CG OD1 OD2 REMARK 470 ILE A 586 CG1 CG2 CD1 REMARK 470 ARG A 588 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 589 CG CD1 CD2 REMARK 470 VAL A 590 CG1 CG2 REMARK 470 ILE A 591 CG1 CG2 CD1 REMARK 470 ILE A 593 CG1 CG2 CD1 REMARK 470 ARG A 596 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 597 CG OD1 ND2 REMARK 470 ASN A 598 CG OD1 ND2 REMARK 470 GLU A 599 CG CD OE1 OE2 REMARK 470 HIS A 600 CG ND1 CD2 CE1 NE2 REMARK 470 ILE A 601 CG1 CG2 CD1 REMARK 470 GLN A 602 CG CD OE1 NE2 REMARK 470 VAL A 603 CG1 CG2 REMARK 470 ILE A 604 CG1 CG2 CD1 REMARK 470 THR A 605 OG1 CG2 REMARK 470 SER A 606 OG REMARK 470 LEU A 607 CG CD1 CD2 REMARK 470 THR A 608 OG1 CG2 REMARK 470 ASN A 609 CG OD1 ND2 REMARK 470 LEU A 611 CG CD1 CD2 REMARK 470 ASP A 612 CG OD1 OD2 REMARK 470 ASP A 613 CG OD1 OD2 REMARK 470 GLU A 614 CG CD OE1 OE2 REMARK 470 SER A 615 OG REMARK 470 VAL A 616 CG1 CG2 REMARK 470 ILE A 617 CG1 CG2 CD1 REMARK 470 GLU A 618 CG CD OE1 OE2 REMARK 470 ARG A 619 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 620 CG CD1 CD2 REMARK 470 HIS A 622 CG ND1 CD2 CE1 NE2 REMARK 470 THR A 623 OG1 CG2 REMARK 470 THR A 624 OG1 CG2 REMARK 470 SER A 625 OG REMARK 470 VAL A 626 CG1 CG2 REMARK 470 ASP A 627 CG OD1 OD2 REMARK 470 GLU A 628 CG CD OE1 OE2 REMARK 470 VAL A 629 CG1 CG2 REMARK 470 LEU A 630 CG CD1 CD2 REMARK 470 GLU A 631 CG CD OE1 OE2 REMARK 470 LEU A 632 CG CD1 CD2 REMARK 470 LEU A 633 CG CD1 CD2 REMARK 470 ARG A 636 CG CD NE CZ NH1 NH2 REMARK 470 SER B 481 OG REMARK 470 LEU B 482 CG CD1 CD2 REMARK 470 LYS B 483 CG CD CE NZ REMARK 470 ASP B 484 CG OD1 OD2 REMARK 470 SER B 485 OG REMARK 470 PHE B 486 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASP B 487 CG OD1 OD2 REMARK 470 ASP B 488 CG OD1 OD2 REMARK 470 SER B 489 OG REMARK 470 SER B 490 OG REMARK 470 ASN B 492 CG OD1 ND2 REMARK 470 LEU B 493 CG CD1 CD2 REMARK 470 PHE B 494 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS B 495 CG CD CE NZ REMARK 470 LEU B 496 CG CD1 CD2 REMARK 470 GLU B 499 CG CD OE1 OE2 REMARK 470 ASN B 500 CG OD1 ND2 REMARK 470 ILE B 501 CG1 CG2 CD1 REMARK 470 PHE B 502 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LEU B 503 CG CD1 CD2 REMARK 470 ARG B 505 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 506 CG CD CE NZ REMARK 470 THR B 509 OG1 CG2 REMARK 470 LYS B 510 CG CD CE NZ REMARK 470 GLU B 511 CG CD OE1 OE2 REMARK 470 GLU B 512 CG CD OE1 OE2 REMARK 470 ILE B 514 CG1 CG2 CD1 REMARK 470 ARG B 515 CG CD NE CZ NH1 NH2 REMARK 470 PHE B 516 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU B 519 CG CD OE1 OE2 REMARK 470 GLN B 520 CG CD OE1 NE2 REMARK 470 LEU B 521 CG CD1 CD2 REMARK 470 VAL B 522 CG1 CG2 REMARK 470 LYS B 523 CG CD CE NZ REMARK 470 TYR B 526 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 VAL B 527 CG1 CG2 REMARK 470 GLU B 528 CG CD OE1 OE2 REMARK 470 PRO B 529 CG CD REMARK 470 GLU B 530 CG CD OE1 OE2 REMARK 470 TYR B 531 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 VAL B 532 CG1 CG2 REMARK 470 GLN B 533 CG CD OE1 NE2 REMARK 470 MET B 535 CG SD CE REMARK 470 LEU B 536 CG CD1 CD2 REMARK 470 ASP B 537 CG OD1 OD2 REMARK 470 ARG B 538 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 539 CG CD OE1 OE2 REMARK 470 LYS B 540 CG CD CE NZ REMARK 470 LEU B 541 CG CD1 CD2 REMARK 470 THR B 542 OG1 CG2 REMARK 470 PRO B 543 CG CD REMARK 470 THR B 544 OG1 CG2 REMARK 470 TYR B 545 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LEU B 546 CG CD1 CD2 REMARK 470 GLU B 548 CG CD OE1 OE2 REMARK 470 SER B 549 OG REMARK 470 ILE B 550 CG1 CG2 CD1 REMARK 470 VAL B 552 CG1 CG2 REMARK 470 PRO B 553 CG CD REMARK 470 HIS B 554 CG ND1 CD2 CE1 NE2 REMARK 470 THR B 556 OG1 CG2 REMARK 470 VAL B 557 CG1 CG2 REMARK 470 GLU B 558 CG CD OE1 OE2 REMARK 470 LYS B 560 CG CD CE NZ REMARK 470 ASP B 561 CG OD1 OD2 REMARK 470 ARG B 562 CG CD NE CZ NH1 NH2 REMARK 470 VAL B 563 CG1 CG2 REMARK 470 LEU B 564 CG CD1 CD2 REMARK 470 LYS B 565 CG CD CE NZ REMARK 470 THR B 566 OG1 CG2 REMARK 470 VAL B 568 CG1 CG2 REMARK 470 VAL B 569 CG1 CG2 REMARK 470 PHE B 570 CG CD1 CD2 CE1 CE2 CZ REMARK 470 CYS B 571 SG REMARK 470 GLN B 572 CG CD OE1 NE2 REMARK 470 TYR B 573 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 PRO B 574 CG CD REMARK 470 GLU B 575 CG CD OE1 OE2 REMARK 470 VAL B 577 CG1 CG2 REMARK 470 ARG B 578 CG CD NE CZ NH1 NH2 REMARK 470 PHE B 579 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU B 581 CG CD OE1 OE2 REMARK 470 GLU B 582 CG CD OE1 OE2 REMARK 470 GLU B 583 CG CD OE1 OE2 REMARK 470 ASP B 584 CG OD1 OD2 REMARK 470 ASP B 585 CG OD1 OD2 REMARK 470 ILE B 586 CG1 CG2 CD1 REMARK 470 ARG B 588 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 589 CG CD1 CD2 REMARK 470 VAL B 590 CG1 CG2 REMARK 470 ILE B 591 CG1 CG2 CD1 REMARK 470 ILE B 593 CG1 CG2 CD1 REMARK 470 ARG B 596 CG CD NE CZ NH1 NH2 REMARK 470 ASN B 597 CG OD1 ND2 REMARK 470 ASN B 598 CG OD1 ND2 REMARK 470 GLU B 599 CG CD OE1 OE2 REMARK 470 HIS B 600 CG ND1 CD2 CE1 NE2 REMARK 470 ILE B 601 CG1 CG2 CD1 REMARK 470 GLN B 602 CG CD OE1 NE2 REMARK 470 VAL B 603 CG1 CG2 REMARK 470 ILE B 604 CG1 CG2 CD1 REMARK 470 THR B 605 OG1 CG2 REMARK 470 SER B 606 OG REMARK 470 LEU B 607 CG CD1 CD2 REMARK 470 THR B 608 OG1 CG2 REMARK 470 ASN B 609 CG OD1 ND2 REMARK 470 LEU B 611 CG CD1 CD2 REMARK 470 ASP B 612 CG OD1 OD2 REMARK 470 ASP B 613 CG OD1 OD2 REMARK 470 GLU B 614 CG CD OE1 OE2 REMARK 470 SER B 615 OG REMARK 470 VAL B 616 CG1 CG2 REMARK 470 ILE B 617 CG1 CG2 CD1 REMARK 470 GLU B 618 CG CD OE1 OE2 REMARK 470 ARG B 619 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 620 CG CD1 CD2 REMARK 470 HIS B 622 CG ND1 CD2 CE1 NE2 REMARK 470 THR B 623 OG1 CG2 REMARK 470 THR B 624 OG1 CG2 REMARK 470 SER B 625 OG REMARK 470 VAL B 626 CG1 CG2 REMARK 470 ASP B 627 CG OD1 OD2 REMARK 470 GLU B 628 CG CD OE1 OE2 REMARK 470 VAL B 629 CG1 CG2 REMARK 470 LEU B 630 CG CD1 CD2 REMARK 470 GLU B 631 CG CD OE1 OE2 REMARK 470 LEU B 632 CG CD1 CD2 REMARK 470 LEU B 633 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 432 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 175 1.23 -62.03 REMARK 500 ILE A 197 -51.24 -124.27 REMARK 500 ALA A 219 30.45 -95.81 REMARK 500 THR A 336 51.81 -91.86 REMARK 500 SER A 366 126.33 70.09 REMARK 500 LEU A 374 34.47 -99.10 REMARK 500 ASP A 484 -82.16 20.41 REMARK 500 SER A 490 -93.13 47.55 REMARK 500 LEU A 493 153.91 69.54 REMARK 500 LEU A 496 -106.63 65.85 REMARK 500 ASN A 597 -137.38 61.65 REMARK 500 TYR B 58 -53.05 -120.51 REMARK 500 PRO B 175 -5.76 -59.03 REMARK 500 ILE B 197 -52.39 -124.89 REMARK 500 PRO B 267 3.45 -64.78 REMARK 500 THR B 336 53.68 -90.32 REMARK 500 LEU B 374 32.94 -99.08 REMARK 500 ASN B 474 -20.90 71.85 REMARK 500 LEU B 482 32.47 -96.20 REMARK 500 ASP B 484 -65.31 61.67 REMARK 500 SER B 490 36.09 74.14 REMARK 500 ASN B 492 167.85 61.70 REMARK 500 LYS B 495 -91.05 55.91 REMARK 500 ASN B 597 -130.80 60.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-68757 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-68759 RELATED DB: EMDB REMARK 900 STRUCTURE OF FULL PERMEASE REMARK 900 RELATED ID: EMD-68758 RELATED DB: EMDB DBREF 22XR A 2 636 UNP P00550 PTM3C_ECOLI 2 636 DBREF 22XR B 2 636 UNP P00550 PTM3C_ECOLI 2 636 SEQRES 1 A 635 SER SER ASP ILE LYS ILE LYS VAL GLN SER PHE GLY ARG SEQRES 2 A 635 PHE LEU SER ASN MET VAL MET PRO ASN ILE GLY ALA PHE SEQRES 3 A 635 ILE ALA TRP GLY ILE ILE THR ALA LEU PHE ILE PRO THR SEQRES 4 A 635 GLY TRP LEU PRO ASN GLU THR LEU ALA LYS LEU VAL GLY SEQRES 5 A 635 PRO MET ILE THR TYR LEU LEU PRO LEU LEU ILE GLY TYR SEQRES 6 A 635 THR GLY GLY LYS LEU VAL GLY GLY GLU ARG GLY GLY VAL SEQRES 7 A 635 VAL GLY ALA ILE THR THR MET GLY VAL ILE VAL GLY ALA SEQRES 8 A 635 ASP MET PRO MET PHE LEU GLY SER MET ILE ALA GLY PRO SEQRES 9 A 635 LEU GLY GLY TRP CYS ILE LYS HIS PHE ASP ARG TRP VAL SEQRES 10 A 635 ASP GLY LYS ILE LYS SER GLY PHE GLU MET LEU VAL ASN SEQRES 11 A 635 ASN PHE SER ALA GLY ILE ILE GLY MET ILE LEU ALA ILE SEQRES 12 A 635 LEU ALA PHE LEU GLY ILE GLY PRO ILE VAL GLU ALA LEU SEQRES 13 A 635 SER LYS MET LEU ALA ALA GLY VAL ASN PHE MET VAL VAL SEQRES 14 A 635 HIS ASP MET LEU PRO LEU ALA SER ILE PHE VAL GLU PRO SEQRES 15 A 635 ALA LYS ILE LEU PHE LEU ASN ASN ALA ILE ASN HIS GLY SEQRES 16 A 635 ILE PHE SER PRO LEU GLY ILE GLN GLN SER HIS GLU LEU SEQRES 17 A 635 GLY LYS SER ILE PHE PHE LEU ILE GLU ALA ASN PRO GLY SEQRES 18 A 635 PRO GLY MET GLY VAL LEU LEU ALA TYR MET PHE PHE GLY SEQRES 19 A 635 ARG GLY SER ALA LYS GLN SER ALA GLY GLY ALA ALA ILE SEQRES 20 A 635 ILE HIS PHE LEU GLY GLY ILE HIS GLU ILE TYR PHE PRO SEQRES 21 A 635 TYR VAL LEU MET ASN PRO ARG LEU ILE LEU ALA VAL ILE SEQRES 22 A 635 LEU GLY GLY MET THR GLY VAL PHE THR LEU THR ILE LEU SEQRES 23 A 635 GLY GLY GLY LEU VAL SER PRO ALA SER PRO GLY SER ILE SEQRES 24 A 635 LEU ALA VAL LEU ALA MET THR PRO LYS GLY ALA TYR PHE SEQRES 25 A 635 ALA ASN ILE ALA GLY VAL CYS ALA ALA MET ALA VAL SER SEQRES 26 A 635 PHE VAL VAL SER ALA ILE LEU LEU LYS THR SER LYS VAL SEQRES 27 A 635 LYS GLU GLU ASP ASP ILE GLU ALA ALA THR ARG ARG MET SEQRES 28 A 635 GLN ASP MET LYS ALA GLU SER LYS GLY ALA SER PRO LEU SEQRES 29 A 635 SER ALA GLY ASP VAL THR ASN ASP LEU SER HIS VAL ARG SEQRES 30 A 635 LYS ILE ILE VAL ALA CYS ASP ALA GLY MET GLY SER SER SEQRES 31 A 635 ALA MET GLY ALA GLY VAL LEU ARG LYS LYS ILE GLN ASP SEQRES 32 A 635 ALA GLY LEU SER GLN ILE SER VAL THR ASN SER ALA ILE SEQRES 33 A 635 ASN ASN LEU PRO PRO ASP VAL ASP LEU VAL ILE THR HIS SEQRES 34 A 635 ARG ASP LEU THR GLU ARG ALA MET ARG GLN VAL PRO GLN SEQRES 35 A 635 ALA GLN HIS ILE SER LEU THR ASN PHE LEU ASP SER GLY SEQRES 36 A 635 LEU TYR THR SER LEU THR GLU ARG LEU VAL ALA ALA GLN SEQRES 37 A 635 ARG HIS THR ALA ASN GLU GLU LYS VAL LYS ASP SER LEU SEQRES 38 A 635 LYS ASP SER PHE ASP ASP SER SER ALA ASN LEU PHE LYS SEQRES 39 A 635 LEU GLY ALA GLU ASN ILE PHE LEU GLY ARG LYS ALA ALA SEQRES 40 A 635 THR LYS GLU GLU ALA ILE ARG PHE ALA GLY GLU GLN LEU SEQRES 41 A 635 VAL LYS GLY GLY TYR VAL GLU PRO GLU TYR VAL GLN ALA SEQRES 42 A 635 MET LEU ASP ARG GLU LYS LEU THR PRO THR TYR LEU GLY SEQRES 43 A 635 GLU SER ILE ALA VAL PRO HIS GLY THR VAL GLU ALA LYS SEQRES 44 A 635 ASP ARG VAL LEU LYS THR GLY VAL VAL PHE CYS GLN TYR SEQRES 45 A 635 PRO GLU GLY VAL ARG PHE GLY GLU GLU GLU ASP ASP ILE SEQRES 46 A 635 ALA ARG LEU VAL ILE GLY ILE ALA ALA ARG ASN ASN GLU SEQRES 47 A 635 HIS ILE GLN VAL ILE THR SER LEU THR ASN ALA LEU ASP SEQRES 48 A 635 ASP GLU SER VAL ILE GLU ARG LEU ALA HIS THR THR SER SEQRES 49 A 635 VAL ASP GLU VAL LEU GLU LEU LEU ALA GLY ARG SEQRES 1 B 635 SER SER ASP ILE LYS ILE LYS VAL GLN SER PHE GLY ARG SEQRES 2 B 635 PHE LEU SER ASN MET VAL MET PRO ASN ILE GLY ALA PHE SEQRES 3 B 635 ILE ALA TRP GLY ILE ILE THR ALA LEU PHE ILE PRO THR SEQRES 4 B 635 GLY TRP LEU PRO ASN GLU THR LEU ALA LYS LEU VAL GLY SEQRES 5 B 635 PRO MET ILE THR TYR LEU LEU PRO LEU LEU ILE GLY TYR SEQRES 6 B 635 THR GLY GLY LYS LEU VAL GLY GLY GLU ARG GLY GLY VAL SEQRES 7 B 635 VAL GLY ALA ILE THR THR MET GLY VAL ILE VAL GLY ALA SEQRES 8 B 635 ASP MET PRO MET PHE LEU GLY SER MET ILE ALA GLY PRO SEQRES 9 B 635 LEU GLY GLY TRP CYS ILE LYS HIS PHE ASP ARG TRP VAL SEQRES 10 B 635 ASP GLY LYS ILE LYS SER GLY PHE GLU MET LEU VAL ASN SEQRES 11 B 635 ASN PHE SER ALA GLY ILE ILE GLY MET ILE LEU ALA ILE SEQRES 12 B 635 LEU ALA PHE LEU GLY ILE GLY PRO ILE VAL GLU ALA LEU SEQRES 13 B 635 SER LYS MET LEU ALA ALA GLY VAL ASN PHE MET VAL VAL SEQRES 14 B 635 HIS ASP MET LEU PRO LEU ALA SER ILE PHE VAL GLU PRO SEQRES 15 B 635 ALA LYS ILE LEU PHE LEU ASN ASN ALA ILE ASN HIS GLY SEQRES 16 B 635 ILE PHE SER PRO LEU GLY ILE GLN GLN SER HIS GLU LEU SEQRES 17 B 635 GLY LYS SER ILE PHE PHE LEU ILE GLU ALA ASN PRO GLY SEQRES 18 B 635 PRO GLY MET GLY VAL LEU LEU ALA TYR MET PHE PHE GLY SEQRES 19 B 635 ARG GLY SER ALA LYS GLN SER ALA GLY GLY ALA ALA ILE SEQRES 20 B 635 ILE HIS PHE LEU GLY GLY ILE HIS GLU ILE TYR PHE PRO SEQRES 21 B 635 TYR VAL LEU MET ASN PRO ARG LEU ILE LEU ALA VAL ILE SEQRES 22 B 635 LEU GLY GLY MET THR GLY VAL PHE THR LEU THR ILE LEU SEQRES 23 B 635 GLY GLY GLY LEU VAL SER PRO ALA SER PRO GLY SER ILE SEQRES 24 B 635 LEU ALA VAL LEU ALA MET THR PRO LYS GLY ALA TYR PHE SEQRES 25 B 635 ALA ASN ILE ALA GLY VAL CYS ALA ALA MET ALA VAL SER SEQRES 26 B 635 PHE VAL VAL SER ALA ILE LEU LEU LYS THR SER LYS VAL SEQRES 27 B 635 LYS GLU GLU ASP ASP ILE GLU ALA ALA THR ARG ARG MET SEQRES 28 B 635 GLN ASP MET LYS ALA GLU SER LYS GLY ALA SER PRO LEU SEQRES 29 B 635 SER ALA GLY ASP VAL THR ASN ASP LEU SER HIS VAL ARG SEQRES 30 B 635 LYS ILE ILE VAL ALA CYS ASP ALA GLY MET GLY SER SER SEQRES 31 B 635 ALA MET GLY ALA GLY VAL LEU ARG LYS LYS ILE GLN ASP SEQRES 32 B 635 ALA GLY LEU SER GLN ILE SER VAL THR ASN SER ALA ILE SEQRES 33 B 635 ASN ASN LEU PRO PRO ASP VAL ASP LEU VAL ILE THR HIS SEQRES 34 B 635 ARG ASP LEU THR GLU ARG ALA MET ARG GLN VAL PRO GLN SEQRES 35 B 635 ALA GLN HIS ILE SER LEU THR ASN PHE LEU ASP SER GLY SEQRES 36 B 635 LEU TYR THR SER LEU THR GLU ARG LEU VAL ALA ALA GLN SEQRES 37 B 635 ARG HIS THR ALA ASN GLU GLU LYS VAL LYS ASP SER LEU SEQRES 38 B 635 LYS ASP SER PHE ASP ASP SER SER ALA ASN LEU PHE LYS SEQRES 39 B 635 LEU GLY ALA GLU ASN ILE PHE LEU GLY ARG LYS ALA ALA SEQRES 40 B 635 THR LYS GLU GLU ALA ILE ARG PHE ALA GLY GLU GLN LEU SEQRES 41 B 635 VAL LYS GLY GLY TYR VAL GLU PRO GLU TYR VAL GLN ALA SEQRES 42 B 635 MET LEU ASP ARG GLU LYS LEU THR PRO THR TYR LEU GLY SEQRES 43 B 635 GLU SER ILE ALA VAL PRO HIS GLY THR VAL GLU ALA LYS SEQRES 44 B 635 ASP ARG VAL LEU LYS THR GLY VAL VAL PHE CYS GLN TYR SEQRES 45 B 635 PRO GLU GLY VAL ARG PHE GLY GLU GLU GLU ASP ASP ILE SEQRES 46 B 635 ALA ARG LEU VAL ILE GLY ILE ALA ALA ARG ASN ASN GLU SEQRES 47 B 635 HIS ILE GLN VAL ILE THR SER LEU THR ASN ALA LEU ASP SEQRES 48 B 635 ASP GLU SER VAL ILE GLU ARG LEU ALA HIS THR THR SER SEQRES 49 B 635 VAL ASP GLU VAL LEU GLU LEU LEU ALA GLY ARG HET MTL A 701 12 HET MTL B 701 12 HETNAM MTL D-MANNITOL FORMUL 3 MTL 2(C6 H14 O6) HELIX 1 AA1 SER A 2 MET A 21 1 20 HELIX 2 AA2 ASN A 23 ILE A 38 1 16 HELIX 3 AA3 THR A 47 LYS A 50 5 4 HELIX 4 AA4 LEU A 51 GLY A 91 1 41 HELIX 5 AA5 PHE A 97 ASP A 119 1 23 HELIX 6 AA6 PHE A 126 HIS A 171 1 46 HELIX 7 AA7 MET A 173 LEU A 176 5 4 HELIX 8 AA8 ALA A 177 LEU A 187 1 11 HELIX 9 AA9 LEU A 189 GLY A 210 1 22 HELIX 10 AB1 PRO A 221 GLY A 235 1 15 HELIX 11 AB2 GLY A 237 GLY A 253 1 17 HELIX 12 AB3 ILE A 255 ILE A 258 5 4 HELIX 13 AB4 TYR A 259 ASN A 266 1 8 HELIX 14 AB5 LEU A 269 GLY A 288 1 20 HELIX 15 AB6 SER A 299 MET A 306 1 8 HELIX 16 AB7 ALA A 311 THR A 336 1 26 HELIX 17 AB8 GLY A 389 GLY A 406 1 18 HELIX 18 AB9 LEU A 433 VAL A 441 1 9 HELIX 19 AC1 ASP A 454 GLN A 469 1 16 HELIX 20 AC2 GLU A 475 LEU A 482 1 8 HELIX 21 AC3 THR A 509 GLY A 525 1 17 HELIX 22 AC4 GLU A 530 GLU A 539 1 10 HELIX 23 AC5 ALA A 559 VAL A 563 5 5 HELIX 24 AC6 GLU A 599 ASP A 613 1 15 HELIX 25 AC7 ASP A 613 THR A 623 1 11 HELIX 26 AC8 SER A 625 GLY A 635 1 11 HELIX 27 AC9 SER B 2 LYS B 6 5 5 HELIX 28 AD1 ILE B 7 MET B 21 1 15 HELIX 29 AD2 ASN B 23 ILE B 38 1 16 HELIX 30 AD3 THR B 47 LYS B 50 5 4 HELIX 31 AD4 LEU B 51 TYR B 58 1 8 HELIX 32 AD5 TYR B 58 GLY B 91 1 34 HELIX 33 AD6 MET B 96 ASP B 119 1 24 HELIX 34 AD7 PHE B 126 GLY B 149 1 24 HELIX 35 AD8 GLY B 149 HIS B 171 1 23 HELIX 36 AD9 MET B 173 PRO B 175 5 3 HELIX 37 AE1 LEU B 176 LEU B 187 1 12 HELIX 38 AE2 LEU B 189 ILE B 197 1 9 HELIX 39 AE3 ILE B 197 GLY B 210 1 14 HELIX 40 AE4 SER B 212 LEU B 216 5 5 HELIX 41 AE5 PRO B 221 GLY B 235 1 15 HELIX 42 AE6 GLY B 237 LEU B 252 1 16 HELIX 43 AE7 ILE B 255 ILE B 258 5 4 HELIX 44 AE8 TYR B 259 ASN B 266 1 8 HELIX 45 AE9 LEU B 269 GLY B 288 1 20 HELIX 46 AF1 SER B 299 MET B 306 1 8 HELIX 47 AF2 ALA B 311 THR B 336 1 26 HELIX 48 AF3 GLY B 389 ALA B 405 1 17 HELIX 49 AF4 ASN B 418 LEU B 420 5 3 HELIX 50 AF5 LEU B 433 VAL B 441 1 9 HELIX 51 AF6 ASP B 454 ALA B 473 1 20 HELIX 52 AF7 ASN B 474 LEU B 482 1 9 HELIX 53 AF8 GLY B 497 GLU B 499 5 3 HELIX 54 AF9 THR B 509 GLY B 524 1 16 HELIX 55 AG1 PRO B 529 THR B 542 1 14 HELIX 56 AG2 ALA B 559 VAL B 563 5 5 HELIX 57 AG3 GLU B 599 ASP B 613 1 15 HELIX 58 AG4 ASP B 613 ALA B 621 1 9 HELIX 59 AG5 SER B 625 GLY B 635 1 11 SHEET 1 AA1 4 SER A 411 ALA A 416 0 SHEET 2 AA1 4 LYS A 379 CYS A 384 1 N ILE A 380 O SER A 411 SHEET 3 AA1 4 LEU A 426 HIS A 430 1 O ILE A 428 N ILE A 381 SHEET 4 AA1 4 GLN A 445 LEU A 449 1 O GLN A 445 N VAL A 427 SHEET 1 AA2 3 ILE A 501 PHE A 502 0 SHEET 2 AA2 3 VAL A 568 ARG A 578 1 O GLN A 572 N PHE A 502 SHEET 3 AA2 3 ILE A 586 ILE A 593 -1 O GLY A 592 N VAL A 569 SHEET 1 AA3 2 TYR A 545 GLY A 547 0 SHEET 2 AA3 2 ILE A 550 ALA A 551 -1 O ILE A 550 N LEU A 546 SHEET 1 AA4 4 SER B 411 ALA B 416 0 SHEET 2 AA4 4 LYS B 379 CYS B 384 1 N ILE B 380 O SER B 411 SHEET 3 AA4 4 LEU B 426 HIS B 430 1 O ILE B 428 N ILE B 381 SHEET 4 AA4 4 GLN B 445 LEU B 449 1 O GLN B 445 N VAL B 427 SHEET 1 AA5 3 ILE B 501 LEU B 503 0 SHEET 2 AA5 3 VAL B 568 VAL B 577 1 O PHE B 570 N PHE B 502 SHEET 3 AA5 3 ALA B 587 ILE B 593 -1 O GLY B 592 N VAL B 569 CISPEP 1 SER A 296 PRO A 297 0 -2.49 CISPEP 2 SER B 296 PRO B 297 0 -3.16 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 CONECT 8272 8273 CONECT 8273 8272 8274 CONECT 8274 8273 8275 8276 CONECT 8275 8274 CONECT 8276 8274 8277 8278 CONECT 8277 8276 CONECT 8278 8276 8279 8280 CONECT 8279 8278 CONECT 8280 8278 8281 8282 CONECT 8281 8280 CONECT 8282 8280 8283 CONECT 8283 8282 CONECT 8284 8285 CONECT 8285 8284 8286 CONECT 8286 8285 8287 8288 CONECT 8287 8286 CONECT 8288 8286 8289 8290 CONECT 8289 8288 CONECT 8290 8288 8291 8292 CONECT 8291 8290 CONECT 8292 8290 8293 8294 CONECT 8293 8292 CONECT 8294 8292 8295 CONECT 8295 8294 MASTER 476 0 2 59 16 0 0 6 8293 2 24 98 END