HEADER TRANSFERASE 24-JAN-26 22UY TITLE S-ADENOSYL-L-METHIONINE HYDROLASE(MJ1651) MUTANT-R89A COMPND MOL_ID: 1; COMPND 2 MOLECULE: (R)-S-ADENOSYL-L-METHIONINE HYDROLASE; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: ADENOSYL-IODINE SYNTHASE,S-ADENOSYL-L-METHIONINE HYDROLASE COMPND 5 (ADENOSINE-FORMING),SAM HYDROLASE (ADENOSINE-FORMING); COMPND 6 EC: 3.13.2.3; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHANOCALDOCOCCUS JANNASCHII DSM 2661; SOURCE 3 ORGANISM_TAXID: 243232; SOURCE 4 STRAIN: ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440; SOURCE 5 GENE: MJ1651; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS ADENOSYL-IODINE SYNTHASE (PROTEIN), TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR L.XIUJUAN,L.SHENG REVDAT 1 18-MAR-26 22UY 0 JRNL AUTH L.SHENG JRNL TITL MOLECULAR MODIFICATION AND MECHANISTIC ELUCIDATION OF JRNL TITL 2 S-ADENOSYL-L-METHIONINE HYDROLASE CONVERSION TO HALOGENASE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16_3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.59 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 32066 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.258 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.230 REMARK 3 FREE R VALUE TEST SET COUNT : 1999 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.5900 - 6.6200 0.99 2273 152 0.1999 0.2069 REMARK 3 2 6.6200 - 5.2600 1.00 2195 145 0.1853 0.2655 REMARK 3 3 5.2600 - 4.5900 1.00 2161 143 0.1444 0.2116 REMARK 3 4 4.5900 - 4.1700 1.00 2176 146 0.1507 0.2210 REMARK 3 5 4.1700 - 3.8800 1.00 2136 141 0.1802 0.2476 REMARK 3 6 3.8800 - 3.6500 0.98 2112 140 0.2089 0.2835 REMARK 3 7 3.6500 - 3.4600 0.98 2116 142 0.2182 0.3233 REMARK 3 8 3.4600 - 3.3100 1.00 2142 142 0.2418 0.2992 REMARK 3 9 3.3100 - 3.1900 1.00 2118 141 0.2390 0.2930 REMARK 3 10 3.1900 - 3.0800 1.00 2117 140 0.2395 0.2850 REMARK 3 11 3.0800 - 2.9800 1.00 2140 143 0.2474 0.2954 REMARK 3 12 2.9800 - 2.9000 1.00 2117 141 0.2801 0.3657 REMARK 3 13 2.9000 - 2.8200 1.00 2117 140 0.3049 0.3811 REMARK 3 14 2.8200 - 2.7500 1.00 2147 143 0.3452 0.4313 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.435 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.456 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 78.26 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 5856 REMARK 3 ANGLE : 1.258 7881 REMARK 3 CHIRALITY : 0.069 908 REMARK 3 PLANARITY : 0.006 979 REMARK 3 DIHEDRAL : 7.678 3535 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 3.6907 29.7549 5.4132 REMARK 3 T TENSOR REMARK 3 T11: 0.4819 T22: 0.4799 REMARK 3 T33: 0.3886 T12: 0.0378 REMARK 3 T13: -0.0522 T23: 0.0221 REMARK 3 L TENSOR REMARK 3 L11: 0.9228 L22: 1.5175 REMARK 3 L33: 1.4204 L12: -0.0567 REMARK 3 L13: -0.3356 L23: 0.5621 REMARK 3 S TENSOR REMARK 3 S11: -0.0261 S12: 0.0247 S13: 0.0835 REMARK 3 S21: -0.2283 S22: -0.1085 S23: 0.0909 REMARK 3 S31: -0.4339 S32: -0.1273 S33: 0.1270 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN 'A' AND (RESID 9 THROUGH 83 OR REMARK 3 RESID 90 THROUGH 127 OR RESID 139 THROUGH REMARK 3 160 OR RESID 162 THROUGH 166 OR RESID 168 REMARK 3 THROUGH 186 OR RESID 198 THROUGH 218 OR REMARK 3 RESID 226 THROUGH 262)) REMARK 3 SELECTION : (CHAIN 'B' AND (RESID 9 THROUGH 38 OR REMARK 3 RESID 40 THROUGH 127 OR RESID 139 THROUGH REMARK 3 160 OR RESID 162 THROUGH 166 OR RESID 168 REMARK 3 THROUGH 186 OR RESID 198 THROUGH 218 OR REMARK 3 RESID 226 THROUGH 262)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: (CHAIN 'A' AND (RESID 9 THROUGH 83 OR REMARK 3 RESID 90 THROUGH 127 OR RESID 139 THROUGH REMARK 3 160 OR RESID 162 THROUGH 166 OR RESID 168 REMARK 3 THROUGH 186 OR RESID 198 THROUGH 218 OR REMARK 3 RESID 226 THROUGH 262)) REMARK 3 SELECTION : (CHAIN 'C' AND (RESID 9 THROUGH 38 OR REMARK 3 RESID 40 THROUGH 83 OR RESID 90 THROUGH REMARK 3 127 OR RESID 139 THROUGH 262)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 22UY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBC ON 28-JAN-26. REMARK 100 THE DEPOSITION ID IS D_1300068965. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-JAN-26 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL18U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.987 REMARK 200 MONOCHROMATOR : SI111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32105 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.750 REMARK 200 RESOLUTION RANGE LOW (A) : 39.592 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.82 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES, 2.0 M AMMONIUM FORMATE, REMARK 280 PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 62.01000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 62.01000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 61.27500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 80.38500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 61.27500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 80.38500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 62.01000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 61.27500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 80.38500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 62.01000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 61.27500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 80.38500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5860 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31540 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -32.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 ILE A 3 REMARK 465 TYR A 4 REMARK 465 MET A 5 REMARK 465 ARG A 6 REMARK 465 ASP A 7 REMARK 465 ASP A 8 REMARK 465 LYS A 39 REMARK 465 THR A 84 REMARK 465 VAL A 85 REMARK 465 GLY A 86 REMARK 465 SER A 87 REMARK 465 GLU A 88 REMARK 465 GLU A 128 REMARK 465 ARG A 129 REMARK 465 PHE A 193 REMARK 465 LYS A 194 REMARK 465 TYR A 195 REMARK 465 TYR A 196 REMARK 465 LEU A 264 REMARK 465 GLU A 265 REMARK 465 HIS A 266 REMARK 465 HIS A 267 REMARK 465 HIS A 268 REMARK 465 HIS A 269 REMARK 465 HIS A 270 REMARK 465 HIS A 271 REMARK 465 MET B 1 REMARK 465 GLY B 2 REMARK 465 ILE B 3 REMARK 465 TYR B 4 REMARK 465 MET B 5 REMARK 465 ARG B 6 REMARK 465 ASP B 7 REMARK 465 THR B 84 REMARK 465 VAL B 85 REMARK 465 GLY B 86 REMARK 465 SER B 87 REMARK 465 GLU B 88 REMARK 465 GLN B 89 REMARK 465 SER B 134 REMARK 465 THR B 135 REMARK 465 PHE B 136 REMARK 465 HIS B 137 REMARK 465 GLY B 138 REMARK 465 LEU B 264 REMARK 465 GLU B 265 REMARK 465 HIS B 266 REMARK 465 HIS B 267 REMARK 465 HIS B 268 REMARK 465 HIS B 269 REMARK 465 HIS B 270 REMARK 465 HIS B 271 REMARK 465 MET C 1 REMARK 465 GLY C 2 REMARK 465 ILE C 3 REMARK 465 TYR C 4 REMARK 465 MET C 5 REMARK 465 ARG C 6 REMARK 465 ASP C 7 REMARK 465 ASP C 8 REMARK 465 THR C 84 REMARK 465 VAL C 85 REMARK 465 GLY C 86 REMARK 465 SER C 87 REMARK 465 GLU C 88 REMARK 465 PRO C 132 REMARK 465 SER C 133 REMARK 465 SER C 134 REMARK 465 THR C 135 REMARK 465 ASP C 161 REMARK 465 ASP C 167 REMARK 465 LYS C 187 REMARK 465 LYS C 188 REMARK 465 ASP C 189 REMARK 465 GLU C 190 REMARK 465 VAL C 191 REMARK 465 THR C 192 REMARK 465 PHE C 193 REMARK 465 LYS C 194 REMARK 465 TYR C 195 REMARK 465 TYR C 196 REMARK 465 ASP C 197 REMARK 465 LYS C 219 REMARK 465 SER C 220 REMARK 465 TYR C 221 REMARK 465 PHE C 222 REMARK 465 GLU C 223 REMARK 465 GLU C 224 REMARK 465 LYS C 225 REMARK 465 TYR C 263 REMARK 465 LEU C 264 REMARK 465 GLU C 265 REMARK 465 HIS C 266 REMARK 465 HIS C 267 REMARK 465 HIS C 268 REMARK 465 HIS C 269 REMARK 465 HIS C 270 REMARK 465 HIS C 271 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LYS B 249 CG - CD - CE ANGL. DEV. = 19.5 DEGREES REMARK 500 LYS B 249 CD - CE - NZ ANGL. DEV. = 15.3 DEGREES REMARK 500 LYS C 54 CB - CG - CD ANGL. DEV. = -17.4 DEGREES REMARK 500 ARG C 139 NE - CZ - NH1 ANGL. DEV. = -4.5 DEGREES REMARK 500 ARG C 139 NE - CZ - NH2 ANGL. DEV. = 3.7 DEGREES REMARK 500 ILE C 229 CG1 - CB - CG2 ANGL. DEV. = -21.1 DEGREES REMARK 500 LYS C 249 CA - CB - CG ANGL. DEV. = 15.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 11 14.04 -143.09 REMARK 500 LYS A 131 66.15 31.13 REMARK 500 GLU B 127 -37.63 -37.53 REMARK 500 LYS B 131 75.73 52.84 REMARK 500 ASP C 11 14.19 -143.70 REMARK 500 GLU C 127 -19.97 -44.05 REMARK 500 ARG C 129 -3.83 -58.14 REMARK 500 TYR C 130 -83.93 -135.82 REMARK 500 HIS C 137 -86.44 -127.10 REMARK 500 MET C 244 63.29 39.79 REMARK 500 REMARK 500 REMARK: NULL DBREF 22UY A 1 263 UNP Q59045 RSAMH_METJA 1 263 DBREF 22UY B 1 263 UNP Q59045 RSAMH_METJA 1 263 DBREF 22UY C 1 263 UNP Q59045 RSAMH_METJA 1 263 SEQADV 22UY GLN A 89 UNP Q59045 ARG 89 ENGINEERED MUTATION SEQADV 22UY LEU A 264 UNP Q59045 EXPRESSION TAG SEQADV 22UY GLU A 265 UNP Q59045 EXPRESSION TAG SEQADV 22UY HIS A 266 UNP Q59045 EXPRESSION TAG SEQADV 22UY HIS A 267 UNP Q59045 EXPRESSION TAG SEQADV 22UY HIS A 268 UNP Q59045 EXPRESSION TAG SEQADV 22UY HIS A 269 UNP Q59045 EXPRESSION TAG SEQADV 22UY HIS A 270 UNP Q59045 EXPRESSION TAG SEQADV 22UY HIS A 271 UNP Q59045 EXPRESSION TAG SEQADV 22UY GLN B 89 UNP Q59045 ARG 89 ENGINEERED MUTATION SEQADV 22UY LEU B 264 UNP Q59045 EXPRESSION TAG SEQADV 22UY GLU B 265 UNP Q59045 EXPRESSION TAG SEQADV 22UY HIS B 266 UNP Q59045 EXPRESSION TAG SEQADV 22UY HIS B 267 UNP Q59045 EXPRESSION TAG SEQADV 22UY HIS B 268 UNP Q59045 EXPRESSION TAG SEQADV 22UY HIS B 269 UNP Q59045 EXPRESSION TAG SEQADV 22UY HIS B 270 UNP Q59045 EXPRESSION TAG SEQADV 22UY HIS B 271 UNP Q59045 EXPRESSION TAG SEQADV 22UY GLN C 89 UNP Q59045 ARG 89 ENGINEERED MUTATION SEQADV 22UY LEU C 264 UNP Q59045 EXPRESSION TAG SEQADV 22UY GLU C 265 UNP Q59045 EXPRESSION TAG SEQADV 22UY HIS C 266 UNP Q59045 EXPRESSION TAG SEQADV 22UY HIS C 267 UNP Q59045 EXPRESSION TAG SEQADV 22UY HIS C 268 UNP Q59045 EXPRESSION TAG SEQADV 22UY HIS C 269 UNP Q59045 EXPRESSION TAG SEQADV 22UY HIS C 270 UNP Q59045 EXPRESSION TAG SEQADV 22UY HIS C 271 UNP Q59045 EXPRESSION TAG SEQRES 1 A 271 MET GLY ILE TYR MET ARG ASP ASP ILE LEU ASP ILE ILE SEQRES 2 A 271 THR LEU THR THR ASP PHE GLY THR ASN GLU GLY TYR VAL SEQRES 3 A 271 GLY ALA MET LYS GLY ARG ILE LEU ASN ILE LEU LYS LYS SEQRES 4 A 271 TYR ASN LYS ASP ALA LYS ILE ILE ASP ILE SER HIS GLU SEQRES 5 A 271 ILE LYS PRO PHE ASN ILE TYR HIS GLY ALA TYR VAL LEU SEQRES 6 A 271 LEU THR ALA ILE PRO TYR PHE PRO PRO SER VAL HIS VAL SEQRES 7 A 271 ALA VAL ILE ASP PRO THR VAL GLY SER GLU GLN LYS SER SEQRES 8 A 271 ILE VAL ILE GLU THR LYS SER GLY TYR TYR LEU VAL GLY SEQRES 9 A 271 PRO ASP ASN GLY LEU PHE THR TYR VAL ALA GLU LYS LEU SEQRES 10 A 271 GLY ILE LYS ARG ILE ILE LYS ILE ASP GLU GLU ARG TYR SEQRES 11 A 271 LYS PRO SER SER THR PHE HIS GLY ARG ASP VAL TYR ALA SEQRES 12 A 271 VAL VAL GLY ALA GLU ILE LEU ILE ASN ASN GLY TYR ASP SEQRES 13 A 271 GLY GLU GLU LEU ASP GLU MET VAL LYS ILE ASP GLU THR SEQRES 14 A 271 LYS LYS ARG VAL ILE HIS ILE ASP ARG PHE GLY ASN ILE SEQRES 15 A 271 ILE THR ASN ILE LYS LYS ASP GLU VAL THR PHE LYS TYR SEQRES 16 A 271 TYR ASP THR ILE MET ILE LYS ILE ARG HIS LYS ASN GLY SEQRES 17 A 271 ILE GLU LYS ILE ILE LYS CYS LYS PHE VAL LYS SER TYR SEQRES 18 A 271 PHE GLU GLU LYS ASN ASN PHE ILE CYS LEU ILE ASN SER SEQRES 19 A 271 GLU GLY PHE LEU GLU ILE SER LYS PHE MET ASP ASN ALA SEQRES 20 A 271 SER LYS LEU LEU ASN VAL ASP TYR LEU ASP GLU ILE GLU SEQRES 21 A 271 ILE ILE TYR LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 271 MET GLY ILE TYR MET ARG ASP ASP ILE LEU ASP ILE ILE SEQRES 2 B 271 THR LEU THR THR ASP PHE GLY THR ASN GLU GLY TYR VAL SEQRES 3 B 271 GLY ALA MET LYS GLY ARG ILE LEU ASN ILE LEU LYS LYS SEQRES 4 B 271 TYR ASN LYS ASP ALA LYS ILE ILE ASP ILE SER HIS GLU SEQRES 5 B 271 ILE LYS PRO PHE ASN ILE TYR HIS GLY ALA TYR VAL LEU SEQRES 6 B 271 LEU THR ALA ILE PRO TYR PHE PRO PRO SER VAL HIS VAL SEQRES 7 B 271 ALA VAL ILE ASP PRO THR VAL GLY SER GLU GLN LYS SER SEQRES 8 B 271 ILE VAL ILE GLU THR LYS SER GLY TYR TYR LEU VAL GLY SEQRES 9 B 271 PRO ASP ASN GLY LEU PHE THR TYR VAL ALA GLU LYS LEU SEQRES 10 B 271 GLY ILE LYS ARG ILE ILE LYS ILE ASP GLU GLU ARG TYR SEQRES 11 B 271 LYS PRO SER SER THR PHE HIS GLY ARG ASP VAL TYR ALA SEQRES 12 B 271 VAL VAL GLY ALA GLU ILE LEU ILE ASN ASN GLY TYR ASP SEQRES 13 B 271 GLY GLU GLU LEU ASP GLU MET VAL LYS ILE ASP GLU THR SEQRES 14 B 271 LYS LYS ARG VAL ILE HIS ILE ASP ARG PHE GLY ASN ILE SEQRES 15 B 271 ILE THR ASN ILE LYS LYS ASP GLU VAL THR PHE LYS TYR SEQRES 16 B 271 TYR ASP THR ILE MET ILE LYS ILE ARG HIS LYS ASN GLY SEQRES 17 B 271 ILE GLU LYS ILE ILE LYS CYS LYS PHE VAL LYS SER TYR SEQRES 18 B 271 PHE GLU GLU LYS ASN ASN PHE ILE CYS LEU ILE ASN SER SEQRES 19 B 271 GLU GLY PHE LEU GLU ILE SER LYS PHE MET ASP ASN ALA SEQRES 20 B 271 SER LYS LEU LEU ASN VAL ASP TYR LEU ASP GLU ILE GLU SEQRES 21 B 271 ILE ILE TYR LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 C 271 MET GLY ILE TYR MET ARG ASP ASP ILE LEU ASP ILE ILE SEQRES 2 C 271 THR LEU THR THR ASP PHE GLY THR ASN GLU GLY TYR VAL SEQRES 3 C 271 GLY ALA MET LYS GLY ARG ILE LEU ASN ILE LEU LYS LYS SEQRES 4 C 271 TYR ASN LYS ASP ALA LYS ILE ILE ASP ILE SER HIS GLU SEQRES 5 C 271 ILE LYS PRO PHE ASN ILE TYR HIS GLY ALA TYR VAL LEU SEQRES 6 C 271 LEU THR ALA ILE PRO TYR PHE PRO PRO SER VAL HIS VAL SEQRES 7 C 271 ALA VAL ILE ASP PRO THR VAL GLY SER GLU GLN LYS SER SEQRES 8 C 271 ILE VAL ILE GLU THR LYS SER GLY TYR TYR LEU VAL GLY SEQRES 9 C 271 PRO ASP ASN GLY LEU PHE THR TYR VAL ALA GLU LYS LEU SEQRES 10 C 271 GLY ILE LYS ARG ILE ILE LYS ILE ASP GLU GLU ARG TYR SEQRES 11 C 271 LYS PRO SER SER THR PHE HIS GLY ARG ASP VAL TYR ALA SEQRES 12 C 271 VAL VAL GLY ALA GLU ILE LEU ILE ASN ASN GLY TYR ASP SEQRES 13 C 271 GLY GLU GLU LEU ASP GLU MET VAL LYS ILE ASP GLU THR SEQRES 14 C 271 LYS LYS ARG VAL ILE HIS ILE ASP ARG PHE GLY ASN ILE SEQRES 15 C 271 ILE THR ASN ILE LYS LYS ASP GLU VAL THR PHE LYS TYR SEQRES 16 C 271 TYR ASP THR ILE MET ILE LYS ILE ARG HIS LYS ASN GLY SEQRES 17 C 271 ILE GLU LYS ILE ILE LYS CYS LYS PHE VAL LYS SER TYR SEQRES 18 C 271 PHE GLU GLU LYS ASN ASN PHE ILE CYS LEU ILE ASN SER SEQRES 19 C 271 GLU GLY PHE LEU GLU ILE SER LYS PHE MET ASP ASN ALA SEQRES 20 C 271 SER LYS LEU LEU ASN VAL ASP TYR LEU ASP GLU ILE GLU SEQRES 21 C 271 ILE ILE TYR LEU GLU HIS HIS HIS HIS HIS HIS FORMUL 4 HOH *15(H2 O) HELIX 1 AA1 GLY A 24 LYS A 38 1 15 HELIX 2 AA2 ASN A 57 ILE A 69 1 13 HELIX 3 AA3 PRO A 70 PHE A 72 5 3 HELIX 4 AA4 PHE A 110 GLY A 118 1 9 HELIX 5 AA5 SER A 133 HIS A 137 5 5 HELIX 6 AA6 VAL A 141 ASN A 153 1 13 HELIX 7 AA7 ASP A 189 VAL A 191 5 3 HELIX 8 AA8 ASN A 246 LEU A 251 1 6 HELIX 9 AA9 GLY B 24 TYR B 40 1 17 HELIX 10 AB1 ASN B 57 ILE B 69 1 13 HELIX 11 AB2 PRO B 70 PHE B 72 5 3 HELIX 12 AB3 PHE B 110 GLY B 118 1 9 HELIX 13 AB4 ASP B 126 TYR B 130 5 5 HELIX 14 AB5 VAL B 141 ASN B 153 1 13 HELIX 15 AB6 ASP B 189 VAL B 191 5 3 HELIX 16 AB7 SER B 220 GLU B 224 5 5 HELIX 17 AB8 ASN B 246 ASN B 252 1 7 HELIX 18 AB9 GLY C 24 TYR C 40 1 17 HELIX 19 AC1 ASN C 57 ILE C 69 1 13 HELIX 20 AC2 PRO C 70 PHE C 72 5 3 HELIX 21 AC3 PHE C 110 GLY C 118 1 9 HELIX 22 AC4 ASP C 126 TYR C 130 5 5 HELIX 23 AC5 VAL C 141 ASN C 153 1 13 HELIX 24 AC6 ASN C 246 ASN C 252 1 7 SHEET 1 AA1 6 LYS A 45 SER A 50 0 SHEET 2 AA1 6 ILE A 12 THR A 17 1 N ILE A 13 O LYS A 45 SHEET 3 AA1 6 VAL A 76 VAL A 80 1 O VAL A 76 N ILE A 12 SHEET 4 AA1 6 TYR A 101 PRO A 105 1 O VAL A 103 N HIS A 77 SHEET 5 AA1 6 SER A 91 THR A 96 -1 N ILE A 94 O LEU A 102 SHEET 6 AA1 6 ILE A 119 LYS A 124 -1 O ILE A 123 N VAL A 93 SHEET 1 AA2 7 VAL A 173 ILE A 176 0 SHEET 2 AA2 7 ILE A 182 LYS A 187 -1 O ILE A 183 N ILE A 174 SHEET 3 AA2 7 PHE A 237 SER A 241 -1 O ILE A 240 N ILE A 182 SHEET 4 AA2 7 PHE A 228 ILE A 232 -1 N ILE A 229 O SER A 241 SHEET 5 AA2 7 GLU A 210 PHE A 217 1 N LYS A 216 O CYS A 230 SHEET 6 AA2 7 THR A 198 ARG A 204 -1 N ILE A 203 O LYS A 211 SHEET 7 AA2 7 GLU A 258 ILE A 262 -1 O GLU A 260 N LYS A 202 SHEET 1 AA3 7 LYS B 45 SER B 50 0 SHEET 2 AA3 7 ILE B 12 THR B 17 1 N LEU B 15 O ILE B 49 SHEET 3 AA3 7 VAL B 76 VAL B 80 1 O VAL B 76 N ILE B 12 SHEET 4 AA3 7 TYR B 101 PRO B 105 1 O VAL B 103 N HIS B 77 SHEET 5 AA3 7 SER B 91 THR B 96 -1 N ILE B 94 O LEU B 102 SHEET 6 AA3 7 ILE B 119 LYS B 124 -1 O ILE B 123 N VAL B 93 SHEET 7 AA3 7 GLU B 159 LEU B 160 -1 O LEU B 160 N ILE B 122 SHEET 1 AA4 7 VAL B 173 ILE B 176 0 SHEET 2 AA4 7 ILE B 182 LYS B 187 -1 O ILE B 183 N ILE B 174 SHEET 3 AA4 7 PHE B 237 SER B 241 -1 O ILE B 240 N ILE B 182 SHEET 4 AA4 7 PHE B 228 ILE B 232 -1 N ILE B 229 O SER B 241 SHEET 5 AA4 7 GLU B 210 PHE B 217 1 N LYS B 216 O CYS B 230 SHEET 6 AA4 7 THR B 198 ARG B 204 -1 N ILE B 199 O CYS B 215 SHEET 7 AA4 7 GLU B 258 ILE B 262 -1 O GLU B 260 N LYS B 202 SHEET 1 AA5 6 LYS C 45 SER C 50 0 SHEET 2 AA5 6 ILE C 12 THR C 17 1 N ILE C 13 O ILE C 47 SHEET 3 AA5 6 VAL C 76 VAL C 80 1 O VAL C 78 N THR C 14 SHEET 4 AA5 6 TYR C 101 PRO C 105 1 O VAL C 103 N HIS C 77 SHEET 5 AA5 6 SER C 91 THR C 96 -1 N ILE C 94 O LEU C 102 SHEET 6 AA5 6 ILE C 119 LYS C 124 -1 O ILE C 123 N VAL C 93 SHEET 1 AA6 7 VAL C 173 ILE C 176 0 SHEET 2 AA6 7 ILE C 182 THR C 184 -1 O ILE C 183 N ILE C 174 SHEET 3 AA6 7 LEU C 238 LYS C 242 -1 O ILE C 240 N ILE C 182 SHEET 4 AA6 7 PHE C 228 ILE C 232 -1 N ILE C 229 O SER C 241 SHEET 5 AA6 7 GLU C 210 PHE C 217 1 N LYS C 216 O CYS C 230 SHEET 6 AA6 7 ILE C 199 ARG C 204 -1 N ILE C 199 O CYS C 215 SHEET 7 AA6 7 GLU C 258 ILE C 262 -1 O GLU C 260 N LYS C 202 CRYST1 122.550 160.770 124.020 90.00 90.00 90.00 C 2 2 21 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008160 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006220 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008063 0.00000 MASTER 420 0 0 24 40 0 0 6 5773 3 0 63 END