HEADER TRANSFERASE 04-MAR-26 24IO TITLE CRYSTAL STRUCTURE OF THE RELSEQ N-TERMINAL DOMAIN FROM STREPTOCOCCUS TITLE 2 EQUISIMILIS IN COMPLEX WITH PPPGPP COMPND MOL_ID: 1; COMPND 2 MOLECULE: BIFUNCTIONAL (P)PPGPP SYNTHASE/HYDROLASE RELA; COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.7.6.5,3.1.7.2; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS DYSGALACTIAE SUBSP. EQUISIMILIS; SOURCE 3 ORGANISM_TAXID: 119602; SOURCE 4 GENE: RELA, REL; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS RELSEQ, BIFUNCTIONAL ENZYME, RELA/SPOT HOMOLOG, STRINGENT RESPONSE, KEYWDS 2 STREPTOCOCCUS EQUISIMILIS, ALARMONE, PPPGPP, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.A.KORBAN,P.S.KASATSKY,Z.A.SPIRIDONOVA,V.V.GURZHIY,A.V.PALESKAVA, AUTHOR 2 A.L.KONEVEGA,D.S.VINOGRADOVA REVDAT 1 18-MAR-26 24IO 0 JRNL AUTH S.A.KORBAN,P.S.KASATSKY,Z.A.SPIRIDONOVA,V.V.GURZHIY, JRNL AUTH 2 A.V.PALESKAVA,A.L.KONEVEGA,D.S.VINOGRADOVA JRNL TITL CRYSTAL STRUCTURE OF THE RELSEQ N-TERMINAL DOMAIN FROM JRNL TITL 2 STREPTOCOCCUS EQUISIMILIS IN COMPLEX WITH PPPGPP JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 58.52 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.6 REMARK 3 NUMBER OF REFLECTIONS : 14180 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.245 REMARK 3 R VALUE (WORKING SET) : 0.242 REMARK 3 FREE R VALUE : 0.299 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 695 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 58.5200 - 5.4700 0.95 2931 146 0.2277 0.2445 REMARK 3 2 5.4700 - 4.3400 0.98 2913 159 0.2240 0.2604 REMARK 3 3 4.3400 - 3.7900 0.98 2866 161 0.2436 0.3577 REMARK 3 4 3.7900 - 3.4400 0.95 2793 131 0.2534 0.2990 REMARK 3 5 3.4400 - 3.2000 0.67 1982 98 0.2705 0.3469 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.479 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.179 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.14 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 43.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 5514 REMARK 3 ANGLE : 0.795 7468 REMARK 3 CHIRALITY : 0.041 835 REMARK 3 PLANARITY : 0.006 916 REMARK 3 DIHEDRAL : 14.348 2055 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 24IO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 05-MAR-26. REMARK 100 THE DEPOSITION ID IS D_1300070306. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-DEC-25 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : SEALED TUBE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU PHOTONJET-S REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : RIGAKU HYPIX-6000HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC REMARK 200 DATA SCALING SOFTWARE : STARANISO REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14251 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.200 REMARK 200 RESOLUTION RANGE LOW (A) : 118.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.9 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.30 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.65 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.54 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS-HCL, PH 8.5, 24% PEG8000, 1M REMARK 280 NACL, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 86.87550 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 22.49250 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 86.87550 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 22.49250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16560 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15610 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 TYR A 113 REMARK 465 LYS A 114 REMARK 465 SER A 115 REMARK 465 HIS A 116 REMARK 465 GLU A 117 REMARK 465 GLU A 118 REMARK 465 GLN A 119 REMARK 465 LEU A 120 REMARK 465 ALA A 121 REMARK 465 GLU A 122 REMARK 465 ASN A 123 REMARK 465 HIS A 154 REMARK 465 LEU A 155 REMARK 465 ARG A 156 REMARK 465 LYS A 157 REMARK 465 ASP A 158 REMARK 465 LYS A 159 REMARK 465 ALA A 344 REMARK 465 TYR A 345 REMARK 465 LYS A 346 REMARK 465 LYS A 347 REMARK 465 GLY A 348 REMARK 465 VAL A 349 REMARK 465 ARG A 350 REMARK 465 GLY A 351 REMARK 465 LYS A 352 REMARK 465 VAL A 353 REMARK 465 ASN A 354 REMARK 465 GLN A 355 REMARK 465 ALA A 356 REMARK 465 GLU A 357 REMARK 465 GLN A 358 REMARK 465 LYS A 359 REMARK 465 VAL A 360 REMARK 465 ASP A 373 REMARK 465 ALA A 374 REMARK 465 SER A 375 REMARK 465 ASN A 376 REMARK 465 GLY A 377 REMARK 465 ASP A 378 REMARK 465 ALA A 379 REMARK 465 VAL A 380 REMARK 465 ASP A 381 REMARK 465 PHE A 382 REMARK 465 VAL A 383 REMARK 465 ASP A 384 REMARK 465 SER A 385 REMARK 465 LEU A 386 REMARK 465 GLU A 387 REMARK 465 HIS A 388 REMARK 465 HIS A 389 REMARK 465 HIS A 390 REMARK 465 HIS A 391 REMARK 465 HIS A 392 REMARK 465 HIS A 393 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 LYS B 3 REMARK 465 GLU B 4 REMARK 465 ILE B 5 REMARK 465 VAL B 111 REMARK 465 GLU B 112 REMARK 465 TYR B 113 REMARK 465 LYS B 114 REMARK 465 SER B 115 REMARK 465 HIS B 116 REMARK 465 GLU B 117 REMARK 465 GLU B 118 REMARK 465 GLN B 119 REMARK 465 LEU B 120 REMARK 465 ALA B 121 REMARK 465 GLU B 122 REMARK 465 ASN B 123 REMARK 465 HIS B 124 REMARK 465 ARG B 125 REMARK 465 LYS B 126 REMARK 465 MET B 127 REMARK 465 LEU B 128 REMARK 465 MET B 129 REMARK 465 ALA B 130 REMARK 465 ASP B 260 REMARK 465 GLN B 261 REMARK 465 ILE B 262 REMARK 465 PHE B 263 REMARK 465 ASP B 264 REMARK 465 HIS B 342 REMARK 465 TRP B 343 REMARK 465 ALA B 344 REMARK 465 TYR B 345 REMARK 465 LYS B 346 REMARK 465 LYS B 347 REMARK 465 GLY B 348 REMARK 465 VAL B 349 REMARK 465 ARG B 350 REMARK 465 GLY B 351 REMARK 465 LYS B 352 REMARK 465 VAL B 353 REMARK 465 ASN B 354 REMARK 465 GLN B 355 REMARK 465 ALA B 356 REMARK 465 GLU B 357 REMARK 465 GLN B 358 REMARK 465 LYS B 359 REMARK 465 VAL B 360 REMARK 465 GLY B 361 REMARK 465 MET B 362 REMARK 465 ASP B 373 REMARK 465 ALA B 374 REMARK 465 SER B 375 REMARK 465 ASN B 376 REMARK 465 GLY B 377 REMARK 465 ASP B 378 REMARK 465 ALA B 379 REMARK 465 VAL B 380 REMARK 465 ASP B 381 REMARK 465 PHE B 382 REMARK 465 VAL B 383 REMARK 465 ASP B 384 REMARK 465 SER B 385 REMARK 465 LEU B 386 REMARK 465 GLU B 387 REMARK 465 HIS B 388 REMARK 465 HIS B 389 REMARK 465 HIS B 390 REMARK 465 HIS B 391 REMARK 465 HIS B 392 REMARK 465 HIS B 393 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 4 CG CD OE1 OE2 REMARK 470 ILE A 5 CG1 CG2 CD1 REMARK 470 LYS A 45 CG CD CE NZ REMARK 470 ASP A 84 CG OD1 OD2 REMARK 470 VAL A 111 CG1 CG2 REMARK 470 GLU A 161 CG CD OE1 OE2 REMARK 470 ARG A 162 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 256 CG CD CE NZ REMARK 470 LYS A 257 CG CD CE NZ REMARK 470 GLN A 261 CG CD OE1 NE2 REMARK 470 ARG A 295 CG CD NE CZ NH1 NH2 REMARK 470 HIS A 342 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 366 CG CD CE NZ REMARK 470 GLU B 22 CG CD OE1 OE2 REMARK 470 LYS B 29 CG CD CE NZ REMARK 470 LYS B 45 CD CE NZ REMARK 470 LYS B 96 CE NZ REMARK 470 LYS B 110 CG CD CE NZ REMARK 470 ARG B 156 CD NE CZ NH1 NH2 REMARK 470 ARG B 162 CG CD NE CZ NH1 NH2 REMARK 470 ILE B 180 CG1 CG2 CD1 REMARK 470 ASN B 208 CG OD1 ND2 REMARK 470 GLU B 209 CG CD OE1 OE2 REMARK 470 LYS B 210 CG CD CE NZ REMARK 470 ARG B 211 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 212 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 213 CG CD OE1 OE2 REMARK 470 LEU B 217 CG CD1 CD2 REMARK 470 ASP B 219 CG OD1 OD2 REMARK 470 ILE B 221 CG1 CG2 CD1 REMARK 470 LYS B 224 CG CD CE NZ REMARK 470 LYS B 226 CG CD CE NZ REMARK 470 SER B 227 OG REMARK 470 THR B 230 OG1 CG2 REMARK 470 GLU B 231 CG CD OE1 OE2 REMARK 470 ARG B 241 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 254 CG OD1 OD2 REMARK 470 LYS B 255 CG CD CE NZ REMARK 470 LYS B 256 CG CD CE NZ REMARK 470 ARG B 258 CG CD NE CZ NH1 NH2 REMARK 470 ILE B 266 CG1 CG2 CD1 REMARK 470 LYS B 319 CG CD CE NZ REMARK 470 LYS B 366 CG CD CE NZ REMARK 470 GLU B 370 CG CD OE1 OE2 REMARK 470 GLN B 372 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 4 -105.52 -113.00 REMARK 500 ILE A 5 -158.62 -99.42 REMARK 500 HIS A 39 32.31 -96.16 REMARK 500 TYR A 41 12.27 56.27 REMARK 500 ARG A 44 -163.48 -102.45 REMARK 500 ILE A 170 -70.67 -126.33 REMARK 500 ASN A 196 71.65 -161.80 REMARK 500 LYS A 256 -128.13 55.24 REMARK 500 GLN A 261 -5.28 -58.98 REMARK 500 ASP A 298 79.23 -115.65 REMARK 500 HIS B 39 76.89 -100.43 REMARK 500 THR B 151 47.32 -109.36 REMARK 500 ASN B 196 85.11 -152.85 REMARK 500 MET B 272 -165.29 -100.22 REMARK 500 ALA B 302 72.85 -150.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 528 DISTANCE = 6.27 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 412 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 53 NE2 REMARK 620 2 ASP A 144 OD1 56.7 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 400 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 77 NE2 REMARK 620 2 ASP B 144 OD1 81.3 REMARK 620 3 0O2 B 402 O2C 153.2 109.9 REMARK 620 N 1 2 DBREF 24IO A 1 385 UNP Q54089 RELA_STREQ 1 385 DBREF 24IO B 1 385 UNP Q54089 RELA_STREQ 1 385 SEQADV 24IO LEU A 386 UNP Q54089 EXPRESSION TAG SEQADV 24IO GLU A 387 UNP Q54089 EXPRESSION TAG SEQADV 24IO HIS A 388 UNP Q54089 EXPRESSION TAG SEQADV 24IO HIS A 389 UNP Q54089 EXPRESSION TAG SEQADV 24IO HIS A 390 UNP Q54089 EXPRESSION TAG SEQADV 24IO HIS A 391 UNP Q54089 EXPRESSION TAG SEQADV 24IO HIS A 392 UNP Q54089 EXPRESSION TAG SEQADV 24IO HIS A 393 UNP Q54089 EXPRESSION TAG SEQADV 24IO LEU B 386 UNP Q54089 EXPRESSION TAG SEQADV 24IO GLU B 387 UNP Q54089 EXPRESSION TAG SEQADV 24IO HIS B 388 UNP Q54089 EXPRESSION TAG SEQADV 24IO HIS B 389 UNP Q54089 EXPRESSION TAG SEQADV 24IO HIS B 390 UNP Q54089 EXPRESSION TAG SEQADV 24IO HIS B 391 UNP Q54089 EXPRESSION TAG SEQADV 24IO HIS B 392 UNP Q54089 EXPRESSION TAG SEQADV 24IO HIS B 393 UNP Q54089 EXPRESSION TAG SEQRES 1 A 393 MET ALA LYS GLU ILE ASN LEU THR GLY GLU GLU VAL VAL SEQRES 2 A 393 ALA LEU ALA ALA LYS TYR MET ASN GLU THR ASP ALA ALA SEQRES 3 A 393 PHE VAL LYS LYS ALA LEU ASP TYR ALA THR ALA ALA HIS SEQRES 4 A 393 PHE TYR GLN VAL ARG LYS SER GLY GLU PRO TYR ILE VAL SEQRES 5 A 393 HIS PRO ILE GLN VAL ALA GLY ILE LEU ALA ASP LEU HIS SEQRES 6 A 393 LEU ASP ALA VAL THR VAL ALA CYS GLY PHE LEU HIS ASP SEQRES 7 A 393 VAL VAL GLU ASP THR ASP ILE THR LEU ASP ASN ILE GLU SEQRES 8 A 393 PHE ASP PHE GLY LYS ASP VAL ARG ASP ILE VAL ASP GLY SEQRES 9 A 393 VAL THR LYS LEU GLY LYS VAL GLU TYR LYS SER HIS GLU SEQRES 10 A 393 GLU GLN LEU ALA GLU ASN HIS ARG LYS MET LEU MET ALA SEQRES 11 A 393 MET SER LYS ASP ILE ARG VAL ILE LEU VAL LYS LEU ALA SEQRES 12 A 393 ASP ARG LEU HIS ASN MET ARG THR LEU LYS HIS LEU ARG SEQRES 13 A 393 LYS ASP LYS GLN GLU ARG ILE SER ARG GLU THR MET GLU SEQRES 14 A 393 ILE TYR ALA PRO LEU ALA HIS ARG LEU GLY ILE SER ARG SEQRES 15 A 393 ILE LYS TRP GLU LEU GLU ASP LEU ALA PHE ARG TYR LEU SEQRES 16 A 393 ASN GLU THR GLU PHE TYR LYS ILE SER HIS MET MET ASN SEQRES 17 A 393 GLU LYS ARG ARG GLU ARG GLU ALA LEU VAL ASP ASP ILE SEQRES 18 A 393 VAL THR LYS ILE LYS SER TYR THR THR GLU GLN GLY LEU SEQRES 19 A 393 PHE GLY ASP VAL TYR GLY ARG PRO LYS HIS ILE TYR SER SEQRES 20 A 393 ILE TYR ARG LYS MET ARG ASP LYS LYS LYS ARG PHE ASP SEQRES 21 A 393 GLN ILE PHE ASP LEU ILE ALA ILE ARG CYS VAL MET GLU SEQRES 22 A 393 THR GLN SER ASP VAL TYR ALA MET VAL GLY TYR ILE HIS SEQRES 23 A 393 GLU LEU TRP ARG PRO MET PRO GLY ARG PHE LYS ASP TYR SEQRES 24 A 393 ILE ALA ALA PRO LYS ALA ASN GLY TYR GLN SER ILE HIS SEQRES 25 A 393 THR THR VAL TYR GLY PRO LYS GLY PRO ILE GLU ILE GLN SEQRES 26 A 393 ILE ARG THR LYS GLU MET HIS GLN VAL ALA GLU TYR GLY SEQRES 27 A 393 VAL ALA ALA HIS TRP ALA TYR LYS LYS GLY VAL ARG GLY SEQRES 28 A 393 LYS VAL ASN GLN ALA GLU GLN LYS VAL GLY MET ASN TRP SEQRES 29 A 393 ILE LYS GLU LEU VAL GLU LEU GLN ASP ALA SER ASN GLY SEQRES 30 A 393 ASP ALA VAL ASP PHE VAL ASP SER LEU GLU HIS HIS HIS SEQRES 31 A 393 HIS HIS HIS SEQRES 1 B 393 MET ALA LYS GLU ILE ASN LEU THR GLY GLU GLU VAL VAL SEQRES 2 B 393 ALA LEU ALA ALA LYS TYR MET ASN GLU THR ASP ALA ALA SEQRES 3 B 393 PHE VAL LYS LYS ALA LEU ASP TYR ALA THR ALA ALA HIS SEQRES 4 B 393 PHE TYR GLN VAL ARG LYS SER GLY GLU PRO TYR ILE VAL SEQRES 5 B 393 HIS PRO ILE GLN VAL ALA GLY ILE LEU ALA ASP LEU HIS SEQRES 6 B 393 LEU ASP ALA VAL THR VAL ALA CYS GLY PHE LEU HIS ASP SEQRES 7 B 393 VAL VAL GLU ASP THR ASP ILE THR LEU ASP ASN ILE GLU SEQRES 8 B 393 PHE ASP PHE GLY LYS ASP VAL ARG ASP ILE VAL ASP GLY SEQRES 9 B 393 VAL THR LYS LEU GLY LYS VAL GLU TYR LYS SER HIS GLU SEQRES 10 B 393 GLU GLN LEU ALA GLU ASN HIS ARG LYS MET LEU MET ALA SEQRES 11 B 393 MET SER LYS ASP ILE ARG VAL ILE LEU VAL LYS LEU ALA SEQRES 12 B 393 ASP ARG LEU HIS ASN MET ARG THR LEU LYS HIS LEU ARG SEQRES 13 B 393 LYS ASP LYS GLN GLU ARG ILE SER ARG GLU THR MET GLU SEQRES 14 B 393 ILE TYR ALA PRO LEU ALA HIS ARG LEU GLY ILE SER ARG SEQRES 15 B 393 ILE LYS TRP GLU LEU GLU ASP LEU ALA PHE ARG TYR LEU SEQRES 16 B 393 ASN GLU THR GLU PHE TYR LYS ILE SER HIS MET MET ASN SEQRES 17 B 393 GLU LYS ARG ARG GLU ARG GLU ALA LEU VAL ASP ASP ILE SEQRES 18 B 393 VAL THR LYS ILE LYS SER TYR THR THR GLU GLN GLY LEU SEQRES 19 B 393 PHE GLY ASP VAL TYR GLY ARG PRO LYS HIS ILE TYR SER SEQRES 20 B 393 ILE TYR ARG LYS MET ARG ASP LYS LYS LYS ARG PHE ASP SEQRES 21 B 393 GLN ILE PHE ASP LEU ILE ALA ILE ARG CYS VAL MET GLU SEQRES 22 B 393 THR GLN SER ASP VAL TYR ALA MET VAL GLY TYR ILE HIS SEQRES 23 B 393 GLU LEU TRP ARG PRO MET PRO GLY ARG PHE LYS ASP TYR SEQRES 24 B 393 ILE ALA ALA PRO LYS ALA ASN GLY TYR GLN SER ILE HIS SEQRES 25 B 393 THR THR VAL TYR GLY PRO LYS GLY PRO ILE GLU ILE GLN SEQRES 26 B 393 ILE ARG THR LYS GLU MET HIS GLN VAL ALA GLU TYR GLY SEQRES 27 B 393 VAL ALA ALA HIS TRP ALA TYR LYS LYS GLY VAL ARG GLY SEQRES 28 B 393 LYS VAL ASN GLN ALA GLU GLN LYS VAL GLY MET ASN TRP SEQRES 29 B 393 ILE LYS GLU LEU VAL GLU LEU GLN ASP ALA SER ASN GLY SEQRES 30 B 393 ASP ALA VAL ASP PHE VAL ASP SER LEU GLU HIS HIS HIS SEQRES 31 B 393 HIS HIS HIS HET GOL A 401 6 HET GOL A 402 6 HET GOL A 403 6 HET GOL A 404 6 HET GOL A 405 6 HET GOL A 406 6 HET GOL A 407 6 HET GOL A 408 6 HET GOL A 409 6 HET GOL A 410 6 HET GOL A 411 6 HET MN A 412 1 HET GOL A 413 6 HET 0O2 A 414 40 HET GOL A 415 6 HET GOL A 416 6 HET MN B 400 1 HET 0O2 B 401 40 HET 0O2 B 402 40 HET GOL B 403 6 HET CL B 404 1 HETNAM GOL GLYCEROL HETNAM MN MANGANESE (II) ION HETNAM 0O2 GUANOSINE 5'-(TETRAHYDROGEN TRIPHOSPHATE) 3'- HETNAM 2 0O2 (TRIHYDROGEN DIPHOSPHATE) HETNAM CL CHLORIDE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL 15(C3 H8 O3) FORMUL 14 MN 2(MN 2+) FORMUL 16 0O2 3(C10 H18 N5 O20 P5) FORMUL 23 CL CL 1- FORMUL 24 HOH *100(H2 O) HELIX 1 AA1 THR A 8 MET A 20 1 13 HELIX 2 AA2 ASN A 21 HIS A 39 1 19 HELIX 3 AA3 ILE A 51 LEU A 64 1 14 HELIX 4 AA4 ASP A 67 HIS A 77 1 11 HELIX 5 AA5 ASP A 78 THR A 83 1 6 HELIX 6 AA6 THR A 86 GLY A 95 1 10 HELIX 7 AA7 GLY A 95 VAL A 111 1 17 HELIX 8 AA8 HIS A 124 MET A 131 5 8 HELIX 9 AA9 ASP A 134 THR A 151 1 18 HELIX 10 AB1 GLU A 161 ILE A 170 1 10 HELIX 11 AB2 ILE A 170 GLY A 179 1 10 HELIX 12 AB3 ILE A 180 ASN A 196 1 17 HELIX 13 AB4 ASN A 196 LYS A 210 1 15 HELIX 14 AB5 LYS A 210 GLY A 233 1 24 HELIX 15 AB6 HIS A 244 LYS A 256 1 13 HELIX 16 AB7 LYS A 257 PHE A 259 5 3 HELIX 17 AB8 THR A 274 GLU A 287 1 14 HELIX 18 AB9 LYS A 329 GLY A 338 1 10 HELIX 19 AC1 VAL A 339 ALA A 341 5 3 HELIX 20 AC2 ASN A 363 LEU A 371 1 9 HELIX 21 AC3 THR B 8 MET B 20 1 13 HELIX 22 AC4 ASN B 21 HIS B 39 1 19 HELIX 23 AC5 ILE B 51 LEU B 64 1 14 HELIX 24 AC6 ASP B 67 HIS B 77 1 11 HELIX 25 AC7 ASP B 78 THR B 83 1 6 HELIX 26 AC8 THR B 86 PHE B 94 1 9 HELIX 27 AC9 GLY B 95 LYS B 110 1 16 HELIX 28 AD1 ASP B 134 THR B 151 1 18 HELIX 29 AD2 ARG B 156 ILE B 170 1 15 HELIX 30 AD3 ILE B 170 LEU B 178 1 9 HELIX 31 AD4 ILE B 180 ASN B 196 1 17 HELIX 32 AD5 ASN B 196 GLU B 231 1 36 HELIX 33 AD6 HIS B 244 LYS B 256 1 13 HELIX 34 AD7 THR B 274 TRP B 289 1 16 HELIX 35 AD8 LYS B 329 GLY B 338 1 10 HELIX 36 AD9 TRP B 364 LEU B 371 1 8 SHEET 1 AA1 5 ASP A 237 ARG A 241 0 SHEET 2 AA1 5 ALA A 267 MET A 272 -1 O ALA A 267 N ARG A 241 SHEET 3 AA1 5 PRO A 321 THR A 328 1 O ARG A 327 N MET A 272 SHEET 4 AA1 5 ILE A 311 TYR A 316 -1 N THR A 313 O ILE A 324 SHEET 5 AA1 5 LYS A 297 ASP A 298 -1 N LYS A 297 O HIS A 312 SHEET 1 AA2 5 ASP B 237 GLY B 240 0 SHEET 2 AA2 5 ILE B 266 MET B 272 -1 O ARG B 269 N TYR B 239 SHEET 3 AA2 5 PRO B 321 THR B 328 1 O GLN B 325 N CYS B 270 SHEET 4 AA2 5 ILE B 311 TYR B 316 -1 N THR B 313 O ILE B 324 SHEET 5 AA2 5 ARG B 290 PRO B 291 -1 N ARG B 290 O TYR B 316 SHEET 1 AA3 5 ASP B 237 GLY B 240 0 SHEET 2 AA3 5 ILE B 266 MET B 272 -1 O ARG B 269 N TYR B 239 SHEET 3 AA3 5 PRO B 321 THR B 328 1 O GLN B 325 N CYS B 270 SHEET 4 AA3 5 ILE B 311 TYR B 316 -1 N THR B 313 O ILE B 324 SHEET 5 AA3 5 LYS B 297 ASP B 298 -1 N LYS B 297 O HIS B 312 LINK NE2 HIS A 53 MN MN A 412 1555 1555 2.65 LINK OD1 ASP A 144 MN MN A 412 1555 1555 2.70 LINK NE2 HIS B 77 MN MN B 400 1555 1555 2.65 LINK OD1 ASP B 144 MN MN B 400 1555 1555 2.18 LINK MN MN B 400 O2C 0O2 B 402 1555 1555 2.33 CRYST1 173.751 44.985 126.433 90.00 110.08 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005755 0.000000 0.002104 0.00000 SCALE2 0.000000 0.022230 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008421 0.00000 CONECT 391 5275 CONECT 1009 5275 CONECT 3240 5334 CONECT 3601 5334 CONECT 5209 5210 5211 CONECT 5210 5209 CONECT 5211 5209 5212 5213 CONECT 5212 5211 CONECT 5213 5211 5214 CONECT 5214 5213 CONECT 5215 5216 5217 CONECT 5216 5215 CONECT 5217 5215 5218 5219 CONECT 5218 5217 CONECT 5219 5217 5220 CONECT 5220 5219 CONECT 5221 5222 5223 CONECT 5222 5221 CONECT 5223 5221 5224 5225 CONECT 5224 5223 CONECT 5225 5223 5226 CONECT 5226 5225 CONECT 5227 5228 5229 CONECT 5228 5227 CONECT 5229 5227 5230 5231 CONECT 5230 5229 CONECT 5231 5229 5232 CONECT 5232 5231 CONECT 5233 5234 5235 CONECT 5234 5233 CONECT 5235 5233 5236 5237 CONECT 5236 5235 CONECT 5237 5235 5238 CONECT 5238 5237 CONECT 5239 5240 5241 CONECT 5240 5239 CONECT 5241 5239 5242 5243 CONECT 5242 5241 CONECT 5243 5241 5244 CONECT 5244 5243 CONECT 5245 5246 5247 CONECT 5246 5245 CONECT 5247 5245 5248 5249 CONECT 5248 5247 CONECT 5249 5247 5250 CONECT 5250 5249 CONECT 5251 5252 5253 CONECT 5252 5251 CONECT 5253 5251 5254 5255 CONECT 5254 5253 CONECT 5255 5253 5256 CONECT 5256 5255 CONECT 5257 5258 5259 CONECT 5258 5257 CONECT 5259 5257 5260 5261 CONECT 5260 5259 CONECT 5261 5259 5262 CONECT 5262 5261 CONECT 5263 5264 5265 CONECT 5264 5263 CONECT 5265 5263 5266 5267 CONECT 5266 5265 CONECT 5267 5265 5268 CONECT 5268 5267 CONECT 5269 5270 5271 CONECT 5270 5269 CONECT 5271 5269 5272 5273 CONECT 5272 5271 CONECT 5273 5271 5274 CONECT 5274 5273 CONECT 5275 391 1009 CONECT 5276 5277 5278 CONECT 5277 5276 CONECT 5278 5276 5279 5280 CONECT 5279 5278 CONECT 5280 5278 5281 CONECT 5281 5280 CONECT 5282 5283 5284 5285 5321 CONECT 5283 5282 CONECT 5284 5282 CONECT 5285 5282 CONECT 5286 5287 5288 5289 5293 CONECT 5287 5286 CONECT 5288 5286 CONECT 5289 5286 CONECT 5290 5291 5292 5293 5294 CONECT 5291 5290 CONECT 5292 5290 CONECT 5293 5286 5290 CONECT 5294 5290 5295 CONECT 5295 5294 5296 5297 5298 CONECT 5296 5295 CONECT 5297 5295 CONECT 5298 5295 5299 CONECT 5299 5298 5300 CONECT 5300 5299 5301 5302 CONECT 5301 5300 5306 CONECT 5302 5300 5303 5304 CONECT 5303 5302 5318 CONECT 5304 5302 5305 5306 CONECT 5305 5304 CONECT 5306 5301 5304 5307 CONECT 5307 5306 5308 5317 CONECT 5308 5307 5309 CONECT 5309 5308 5310 CONECT 5310 5309 5311 5317 CONECT 5311 5310 5312 5313 CONECT 5312 5311 CONECT 5313 5311 5314 CONECT 5314 5313 5315 5316 CONECT 5315 5314 CONECT 5316 5314 5317 CONECT 5317 5307 5310 5316 CONECT 5318 5303 5319 5320 5321 CONECT 5319 5318 CONECT 5320 5318 CONECT 5321 5282 5318 CONECT 5322 5323 5324 CONECT 5323 5322 CONECT 5324 5322 5325 5326 CONECT 5325 5324 CONECT 5326 5324 5327 CONECT 5327 5326 CONECT 5328 5329 5330 CONECT 5329 5328 CONECT 5330 5328 5331 5332 CONECT 5331 5330 CONECT 5332 5330 5333 CONECT 5333 5332 CONECT 5334 3240 3601 5413 CONECT 5335 5336 5337 5338 5374 CONECT 5336 5335 CONECT 5337 5335 CONECT 5338 5335 CONECT 5339 5340 5341 5342 5346 CONECT 5340 5339 CONECT 5341 5339 CONECT 5342 5339 CONECT 5343 5344 5345 5346 5347 CONECT 5344 5343 CONECT 5345 5343 CONECT 5346 5339 5343 CONECT 5347 5343 5348 CONECT 5348 5347 5349 5350 5351 CONECT 5349 5348 CONECT 5350 5348 CONECT 5351 5348 5352 CONECT 5352 5351 5353 CONECT 5353 5352 5354 5355 CONECT 5354 5353 5359 CONECT 5355 5353 5356 5357 CONECT 5356 5355 5371 CONECT 5357 5355 5358 5359 CONECT 5358 5357 CONECT 5359 5354 5357 5360 CONECT 5360 5359 5361 5370 CONECT 5361 5360 5362 CONECT 5362 5361 5363 CONECT 5363 5362 5364 5370 CONECT 5364 5363 5365 5366 CONECT 5365 5364 CONECT 5366 5364 5367 CONECT 5367 5366 5368 5369 CONECT 5368 5367 CONECT 5369 5367 5370 CONECT 5370 5360 5363 5369 CONECT 5371 5356 5372 5373 5374 CONECT 5372 5371 CONECT 5373 5371 CONECT 5374 5335 5371 CONECT 5375 5376 5377 5378 5414 CONECT 5376 5375 CONECT 5377 5375 CONECT 5378 5375 CONECT 5379 5380 5381 5382 5386 CONECT 5380 5379 CONECT 5381 5379 CONECT 5382 5379 CONECT 5383 5384 5385 5386 5387 CONECT 5384 5383 CONECT 5385 5383 CONECT 5386 5379 5383 CONECT 5387 5383 5388 CONECT 5388 5387 5389 5390 5391 CONECT 5389 5388 CONECT 5390 5388 CONECT 5391 5388 5392 CONECT 5392 5391 5393 CONECT 5393 5392 5394 5395 CONECT 5394 5393 5399 CONECT 5395 5393 5396 5397 CONECT 5396 5395 5411 CONECT 5397 5395 5398 5399 CONECT 5398 5397 CONECT 5399 5394 5397 5400 CONECT 5400 5399 5401 5410 CONECT 5401 5400 5402 CONECT 5402 5401 5403 CONECT 5403 5402 5404 5410 CONECT 5404 5403 5405 5406 CONECT 5405 5404 CONECT 5406 5404 5407 CONECT 5407 5406 5408 5409 CONECT 5408 5407 CONECT 5409 5407 5410 CONECT 5410 5400 5403 5409 CONECT 5411 5396 5412 5413 5414 CONECT 5412 5411 CONECT 5413 5334 5411 CONECT 5414 5375 5411 CONECT 5415 5416 5417 CONECT 5416 5415 CONECT 5417 5415 5418 5419 CONECT 5418 5417 CONECT 5419 5417 5420 CONECT 5420 5419 MASTER 459 0 21 36 15 0 0 6 5492 2 216 62 END