HEADER HYDROLASE 13-MAR-26 24OK TITLE CRYSTAL STRUCTURE OF HUMAN DUTPASE COMPLEXED WITH ZINC. COMPND MOL_ID: 1; COMPND 2 MOLECULE: DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE, COMPND 3 MITOCHONDRIAL; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: DUTPASE,DUTP PYROPHOSPHATASE; COMPND 6 EC: 3.6.1.23; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: DUT; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DUT, DUTPASE, HUMAN DUTPASE, DEOXYURIDINE 5'-TRIPHOSPHATE KEYWDS 2 NUCLEOTIDOHYDROLASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR B.A.KRINKEL,Y.YOSAATMADJA,K.M.LOOMES,C.J.SQUIRE REVDAT 1 01-APR-26 24OK 0 JRNL AUTH B.A.KRINKEL,Y.YOSAATMADJA,K.M.LOOMES,C.J.SQUIRE JRNL TITL HUMAN DUTPASE CRYSTAL STRUCTURE AND... JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.01 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0431 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.01 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.69 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 13553 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.212 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.885 REMARK 3 FREE R VALUE TEST SET COUNT : 662 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.01 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.06 REMARK 3 REFLECTION IN BIN (WORKING SET) : 951 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.80 REMARK 3 BIN R VALUE (WORKING SET) : 0.3440 REMARK 3 BIN FREE R VALUE SET COUNT : 34 REMARK 3 BIN FREE R VALUE : 0.3800 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 943 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 17 REMARK 3 SOLVENT ATOMS : 67 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 51.57 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.151 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.137 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.113 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.318 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.949 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1013 ; 0.006 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 960 ; 0.005 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1356 ; 1.297 ; 1.838 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2203 ; 1.248 ; 1.762 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 127 ; 6.222 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 9 ; 6.674 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 160 ;13.173 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 146 ; 0.058 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1196 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 238 ; 0.019 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 131 ; 0.190 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 90 ; 0.329 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 489 ; 0.179 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 60 ; 0.150 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): 10 ; 0.081 ; 0.200 REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 505 ; 4.247 ; 5.293 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 505 ; 4.240 ; 5.293 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 633 ; 6.007 ; 9.477 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 634 ; 6.003 ; 9.481 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 508 ; 5.044 ; 5.819 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 509 ; 5.039 ; 5.825 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 723 ; 7.547 ;10.420 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 724 ; 7.542 ;10.423 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 24OK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 17-MAR-26. REMARK 100 THE DEPOSITION ID IS D_1300071533. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-OCT-24 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13576 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.010 REMARK 200 RESOLUTION RANGE LOW (A) : 48.691 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 19.40 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.01 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.06 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CRYSTAL CONDITION: 0.09M 1,6 REMARK 280 -HEXANEDIOL, 1-BUTANOL, 1,2-PROPANEDIOL, 2-PROPANOL, 1,4- REMARK 280 BUTANEDIOL, 1,3-PROPANEDIOL. 0.1M TRIS (BASE), BICINE. 30% V/V REMARK 280 GLYCEROL, PEG 4000. (MORPHEUS D3) SEEDED WITH: 0.2M ZINC ACETATE, REMARK 280 0.1M SODIUM CACODYLATE, 10% V/V 2-PROPANOL, PH 6.5 (JCSG E7), REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 42.12650 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 42.12650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.12650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 42.12650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 42.12650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 42.12650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 42.12650 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 42.12650 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 42.12650 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 42.12650 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 42.12650 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 42.12650 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 42.12650 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 42.12650 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 42.12650 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 42.12650 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 42.12650 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 42.12650 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11870 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14090 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -457.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 3 1.000000 0.000000 0.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 ZN ZN A 202 LIES ON A SPECIAL POSITION. REMARK 375 ZN ZN A 203 LIES ON A SPECIAL POSITION. REMARK 375 ZN ZN A 204 LIES ON A SPECIAL POSITION. REMARK 375 ZN ZN A 205 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 351 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 359 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 361 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 365 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 ALA A -18 REMARK 465 SER A -17 REMARK 465 THR A -16 REMARK 465 VAL A -15 REMARK 465 GLY A -14 REMARK 465 ALA A -13 REMARK 465 ALA A -12 REMARK 465 GLY A -11 REMARK 465 TRP A -10 REMARK 465 LYS A -9 REMARK 465 GLY A -8 REMARK 465 GLU A -7 REMARK 465 LEU A -6 REMARK 465 PRO A -5 REMARK 465 LYS A -4 REMARK 465 ALA A -3 REMARK 465 GLY A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 PRO A 1 REMARK 465 ALA A 2 REMARK 465 PRO A 3 REMARK 465 GLY A 4 REMARK 465 PRO A 5 REMARK 465 GLU A 6 REMARK 465 THR A 7 REMARK 465 PRO A 8 REMARK 465 ALA A 9 REMARK 465 ILE A 10 REMARK 465 SER A 11 REMARK 465 PRO A 12 REMARK 465 SER A 13 REMARK 465 LYS A 14 REMARK 465 ARG A 15 REMARK 465 ALA A 16 REMARK 465 ARG A 17 REMARK 465 PRO A 18 REMARK 465 ALA A 19 REMARK 465 GLU A 20 REMARK 465 VAL A 21 REMARK 465 GLY A 22 REMARK 465 GLY A 23 REMARK 465 MET A 24 REMARK 465 GLN A 25 REMARK 465 ASP A 149 REMARK 465 ASP A 150 REMARK 465 THR A 151 REMARK 465 GLU A 152 REMARK 465 ARG A 153 REMARK 465 GLY A 154 REMARK 465 SER A 155 REMARK 465 GLY A 156 REMARK 465 GLY A 157 REMARK 465 PHE A 158 REMARK 465 GLY A 159 REMARK 465 SER A 160 REMARK 465 THR A 161 REMARK 465 GLY A 162 REMARK 465 LYS A 163 REMARK 465 ASN A 164 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 44 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 141 CG CD OE1 OE2 REMARK 470 GLN A 146 CG CD OE1 NE2 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 203 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 34 NE2 REMARK 620 2 HIS A 34 NE2 0.0 REMARK 620 3 HOH A 361 O 121.5 121.5 REMARK 620 4 HOH A 361 O 121.5 121.5 0.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 206 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 92 NE2 REMARK 620 2 HOH A 327 O 81.6 REMARK 620 3 HOH A 358 O 101.7 109.4 REMARK 620 4 HOH A 360 O 111.4 147.6 97.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 205 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 95 OD2 REMARK 620 2 ASP A 95 OD2 0.0 REMARK 620 3 HOH A 315 O 92.5 92.5 REMARK 620 4 HOH A 315 O 164.6 164.6 76.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 202 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 135 OE1 REMARK 620 2 GLU A 135 OE1 0.0 REMARK 620 3 HOH A 351 O 125.0 125.0 REMARK 620 4 HOH A 351 O 131.3 131.3 6.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 204 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 135 OE1 REMARK 620 2 GLU A 135 OE1 0.0 REMARK 620 3 HOH A 359 O 146.0 146.0 REMARK 620 4 HOH A 359 O 146.0 146.0 0.0 REMARK 620 N 1 2 3 DBREF 24OK A -18 164 UNP P33316 DUT_HUMAN 70 252 SEQADV 24OK MET A -19 UNP P33316 INITIATING METHIONINE SEQRES 1 A 184 MET ALA SER THR VAL GLY ALA ALA GLY TRP LYS GLY GLU SEQRES 2 A 184 LEU PRO LYS ALA GLY GLY SER PRO ALA PRO GLY PRO GLU SEQRES 3 A 184 THR PRO ALA ILE SER PRO SER LYS ARG ALA ARG PRO ALA SEQRES 4 A 184 GLU VAL GLY GLY MET GLN LEU ARG PHE ALA ARG LEU SER SEQRES 5 A 184 GLU HIS ALA THR ALA PRO THR ARG GLY SER ALA ARG ALA SEQRES 6 A 184 ALA GLY TYR ASP LEU TYR SER ALA TYR ASP TYR THR ILE SEQRES 7 A 184 PRO PRO MET GLU LYS ALA VAL VAL LYS THR ASP ILE GLN SEQRES 8 A 184 ILE ALA LEU PRO SER GLY CYS TYR GLY ARG VAL ALA PRO SEQRES 9 A 184 ARG SER GLY LEU ALA ALA LYS HIS PHE ILE ASP VAL GLY SEQRES 10 A 184 ALA GLY VAL ILE ASP GLU ASP TYR ARG GLY ASN VAL GLY SEQRES 11 A 184 VAL VAL LEU PHE ASN PHE GLY LYS GLU LYS PHE GLU VAL SEQRES 12 A 184 LYS LYS GLY ASP ARG ILE ALA GLN LEU ILE CYS GLU ARG SEQRES 13 A 184 ILE PHE TYR PRO GLU ILE GLU GLU VAL GLN ALA LEU ASP SEQRES 14 A 184 ASP THR GLU ARG GLY SER GLY GLY PHE GLY SER THR GLY SEQRES 15 A 184 LYS ASN HET EDO A 201 4 HET ZN A 202 1 HET ZN A 203 1 HET ZN A 204 1 HET ZN A 205 1 HET ZN A 206 1 HET EDO A 207 4 HET EDO A 208 4 HETNAM EDO 1,2-ETHANEDIOL HETNAM ZN ZINC ION HETSYN EDO ETHYLENE GLYCOL FORMUL 2 EDO 3(C2 H6 O2) FORMUL 3 ZN 5(ZN 2+) FORMUL 10 HOH *67(H2 O) HELIX 1 AA1 GLY A 87 PHE A 93 1 7 SHEET 1 AA1 2 ARG A 27 ARG A 30 0 SHEET 2 AA1 2 ILE A 70 ALA A 73 -1 O ALA A 73 N ARG A 27 SHEET 1 AA2 4 GLY A 47 TYR A 51 0 SHEET 2 AA2 4 ARG A 128 ARG A 136 -1 O LEU A 132 N TYR A 48 SHEET 3 AA2 4 CYS A 78 PRO A 84 -1 N ARG A 81 O ILE A 133 SHEET 4 AA2 4 VAL A 100 ILE A 101 -1 O ILE A 101 N GLY A 80 SHEET 1 AA3 2 TYR A 56 ILE A 58 0 SHEET 2 AA3 2 PHE A 121 VAL A 123 -1 O VAL A 123 N TYR A 56 SHEET 1 AA4 3 GLU A 62 LYS A 67 0 SHEET 2 AA4 3 GLY A 110 ASN A 115 -1 O VAL A 111 N VAL A 66 SHEET 3 AA4 3 ILE A 94 VAL A 96 -1 N ASP A 95 O PHE A 114 LINK NE2 HIS A 34 ZN ZN A 203 1555 1555 2.10 LINK NE2 HIS A 34 ZN ZN A 203 1555 11455 2.10 LINK NE2 HIS A 92 ZN ZN A 206 1555 1555 2.14 LINK OD2 ASP A 95 ZN ZN A 205 1555 1555 2.01 LINK OD2 ASP A 95 ZN ZN A 205 1555 9555 2.00 LINK OE1 GLU A 135 ZN ZN A 202 1555 1555 2.04 LINK OE1 GLU A 135 ZN ZN A 202 1555 9555 1.89 LINK OE1 GLU A 135 ZN ZN A 204 1555 1555 2.45 LINK OE1 GLU A 135 ZN ZN A 204 1555 5555 2.45 LINK ZN ZN A 202 O HOH A 351 1555 1555 2.02 LINK ZN ZN A 202 O HOH A 351 1555 9555 2.01 LINK ZN ZN A 203 O HOH A 361 1555 1555 2.01 LINK ZN ZN A 203 O HOH A 361 1555 8555 2.01 LINK ZN ZN A 204 O HOH A 359 1555 1555 2.02 LINK ZN ZN A 204 O HOH A 359 1555 5555 2.02 LINK ZN ZN A 205 O HOH A 315 1555 1555 2.02 LINK ZN ZN A 205 O HOH A 315 1555 5555 2.01 LINK ZN ZN A 206 O HOH A 327 1555 1555 2.02 LINK ZN ZN A 206 O HOH A 358 1555 1555 2.02 LINK ZN ZN A 206 O HOH A 360 1555 1555 2.04 CRYST1 84.253 84.253 84.253 90.00 90.00 90.00 P 21 3 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011869 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011869 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011869 0.00000 CONECT 79 978 CONECT 501 981 CONECT 528 980 CONECT 865 977 979 CONECT 973 974 975 CONECT 974 973 CONECT 975 973 976 CONECT 976 975 CONECT 977 865 1040 CONECT 978 79 1050 CONECT 979 865 1048 CONECT 980 528 1004 CONECT 981 501 1016 1047 1049 CONECT 982 983 984 CONECT 983 982 CONECT 984 982 985 CONECT 985 984 CONECT 986 987 988 CONECT 987 986 CONECT 988 986 989 CONECT 989 988 CONECT 1004 980 CONECT 1016 981 CONECT 1040 977 CONECT 1047 981 CONECT 1048 979 CONECT 1049 981 CONECT 1050 978 MASTER 422 0 8 1 11 0 0 6 1027 1 28 15 END