HEADER OXIDOREDUCTASE 16-APR-26 25RT TITLE CRYSTAL STRUCTURE OF IPHB FROM COMAMONAS TESTOSTERONI KF1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SHORT-CHAIN DEHYDROGENASE/REDUCTASE SDR; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: COMAMONAS TESTOSTERONI KF-1; SOURCE 3 ORGANISM_TAXID: 399795; SOURCE 4 GENE: CTESDRAFT_PD2137; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS DEHYDROGENASE, BACTERIAL PROTEIN, OXIDOREDUCTASE, SDR EXPDTA X-RAY DIFFRACTION AUTHOR M.SHARMA,J.K.MAHTO,K.JANGID,P.KUMAR REVDAT 1 14-OCT-26 25RT 0 JRNL AUTH M.SHARMA,J.K.MAHTO,P.KUMAR JRNL TITL CRYSTAL STRUCTURE OF IPHB FROM COMAMONAS TESTOSTERONI KF1 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.52 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0431 (REFMACAT 0.4.126) REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.52 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 72.06 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 71252 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.132 REMARK 3 FREE R VALUE : 0.162 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.824 REMARK 3 FREE R VALUE TEST SET COUNT : 3437 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.52 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.56 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5034 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.94 REMARK 3 BIN R VALUE (WORKING SET) : 0.1860 REMARK 3 BIN FREE R VALUE SET COUNT : 238 REMARK 3 BIN FREE R VALUE : 0.2300 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3467 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 16 REMARK 3 SOLVENT ATOMS : 262 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.23 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.43200 REMARK 3 B22 (A**2) : 0.75400 REMARK 3 B33 (A**2) : -1.04300 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.12200 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.068 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.059 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.041 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.515 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.979 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.972 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3555 ; 0.010 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 3381 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4823 ; 1.791 ; 1.778 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7719 ; 0.634 ; 1.725 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 482 ; 6.736 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 28 ; 7.536 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 543 ;13.086 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 558 ; 0.096 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4375 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 833 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 696 ; 0.222 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 114 ; 0.143 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1776 ; 0.177 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 157 ; 0.138 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1919 ; 4.345 ; 1.593 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1919 ; 4.335 ; 1.592 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2395 ; 6.156 ; 2.864 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2396 ; 6.157 ; 2.863 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1636 ; 6.559 ; 1.918 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1637 ; 6.558 ; 1.919 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2425 ; 9.026 ; 3.383 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2426 ; 9.024 ; 3.383 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 6936 ; 4.167 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 4 A 259 NULL REMARK 3 1 B 4 B 259 NULL REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 4 A 259 REMARK 3 ORIGIN FOR THE GROUP (A): 29.6895 -0.0421 20.4451 REMARK 3 T TENSOR REMARK 3 T11: 0.0270 T22: 0.0186 REMARK 3 T33: 0.0276 T12: 0.0045 REMARK 3 T13: 0.0103 T23: 0.0223 REMARK 3 L TENSOR REMARK 3 L11: 0.7263 L22: 0.7305 REMARK 3 L33: 1.3030 L12: 0.1912 REMARK 3 L13: 0.2461 L23: 0.0429 REMARK 3 S TENSOR REMARK 3 S11: -0.0054 S12: 0.1128 S13: 0.1288 REMARK 3 S21: -0.0973 S22: 0.0083 S23: -0.0102 REMARK 3 S31: -0.1270 S32: 0.0164 S33: -0.0029 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 4 B 259 REMARK 3 ORIGIN FOR THE GROUP (A): 25.7328 -29.0386 22.2920 REMARK 3 T TENSOR REMARK 3 T11: 0.0232 T22: 0.0174 REMARK 3 T33: 0.0234 T12: -0.0131 REMARK 3 T13: -0.0021 T23: -0.0136 REMARK 3 L TENSOR REMARK 3 L11: 0.9452 L22: 0.7698 REMARK 3 L33: 1.3527 L12: -0.0891 REMARK 3 L13: 0.1557 L23: 0.1263 REMARK 3 S TENSOR REMARK 3 S11: 0.0187 S12: 0.0690 S13: -0.1160 REMARK 3 S21: -0.0317 S22: -0.0346 S23: 0.0907 REMARK 3 S31: 0.1601 S32: -0.1139 S33: 0.0160 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 25RT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-APR-26. REMARK 100 THE DEPOSITION ID IS D_1300072937. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-SEP-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ELETTRA REMARK 200 BEAMLINE : 11.2C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROCESS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 71252 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.510 REMARK 200 RESOLUTION RANGE LOW (A) : 72.060 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.51 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.54 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M AMMONIUM SULFATE, 0.1M SODIUM REMARK 280 CACODYLATE TRIHYDRATE PH 6.5, 30% PEG8000, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 43.01500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.85000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 43.01500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 37.85000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 14050 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30760 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -74.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 70.84890 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 72.05820 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 197 REMARK 465 VAL A 198 REMARK 465 GLY A 199 REMARK 465 ARG A 200 REMARK 465 ALA A 201 REMARK 465 ARG A 202 REMARK 465 ASN A 203 REMARK 465 ALA A 204 REMARK 465 GLY A 205 REMARK 465 LYS A 206 REMARK 465 SER A 207 REMARK 465 VAL A 208 REMARK 465 GLU A 209 REMARK 465 GLN A 210 REMARK 465 LEU A 211 REMARK 465 ARG A 212 REMARK 465 THR A 213 REMARK 465 GLU A 214 REMARK 465 VAL B 198 REMARK 465 GLY B 199 REMARK 465 ARG B 200 REMARK 465 ALA B 201 REMARK 465 ARG B 202 REMARK 465 ASN B 203 REMARK 465 ALA B 204 REMARK 465 GLY B 205 REMARK 465 LYS B 206 REMARK 465 SER B 207 REMARK 465 VAL B 208 REMARK 465 GLU B 209 REMARK 465 GLN B 210 REMARK 465 LEU B 211 REMARK 465 ARG B 212 REMARK 465 THR B 213 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HD22 ASN B 143 HG1 THR B 170 1.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 183 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 MET A 251 CG - SD - CE ANGL. DEV. = -10.3 DEGREES REMARK 500 ARG B 60 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG B 60 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 MET B 65 CG - SD - CE ANGL. DEV. = -23.9 DEGREES REMARK 500 MET B 251 CG - SD - CE ANGL. DEV. = -15.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 145 -132.77 -102.87 REMARK 500 MET A 156 40.71 -140.51 REMARK 500 SER B 145 -130.35 -104.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 240 0.08 SIDE CHAIN REMARK 500 ARG B 240 0.11 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 25RT A 4 259 UNP B7WRK6 B7WRK6_COMTK 4 259 DBREF 25RT B 4 259 UNP B7WRK6 B7WRK6_COMTK 4 259 SEQRES 1 A 256 SER ARG MET ALA GLY ARG THR ALA LEU ILE THR GLY ALA SEQRES 2 A 256 GLY ALA GLY ILE GLY ALA ALA ALA SER HIS LEU PHE CYS SEQRES 3 A 256 LYS GLU GLY ALA ALA VAL LEU MET VAL ASP ALA ASN ALA SEQRES 4 A 256 GLU ALA LEU GLU ARG THR ARG GLU ALA ILE LEU GLN ALA SEQRES 5 A 256 VAL PRO GLY ALA ARG LEU ALA CYS VAL MET ALA ASP VAL SEQRES 6 A 256 SER ASP GLU SER ALA ALA ALA ALA ALA VAL GLY GLN CYS SEQRES 7 A 256 VAL GLN GLN TRP GLY GLY LEU ASP THR LEU VAL ASN ASN SEQRES 8 A 256 ALA ALA MET ARG ASN TYR SER ALA ALA ALA ASP ALA THR SEQRES 9 A 256 ALA ALA GLU TRP GLN ALA MET VAL GLY VAL ASN LEU VAL SEQRES 10 A 256 GLY MET SER ASN TYR CYS ARG ALA ALA LEU PRO ALA LEU SEQRES 11 A 256 ARG GLN SER GLY THR GLY SER ILE VAL ASN VAL SER SER SEQRES 12 A 256 CYS TYR ALA VAL THR GLY ARG LYS GLY MET ALA LEU TYR SEQRES 13 A 256 ASP ALA THR LYS ALA ALA GLN LEU ALA TYR THR ARG SER SEQRES 14 A 256 LEU ALA PHE GLU GLU ALA ALA HIS GLY VAL ARG ALA ASN SEQRES 15 A 256 ALA VAL CYS PRO GLY SER THR LEU THR ASP PHE HIS VAL SEQRES 16 A 256 GLY ARG ALA ARG ASN ALA GLY LYS SER VAL GLU GLN LEU SEQRES 17 A 256 ARG THR GLU ARG LYS ASP THR SER LEU ILE GLY ARG TRP SEQRES 18 A 256 ALA SER PRO GLU GLU ILE ALA TRP PRO ILE PHE TRP LEU SEQRES 19 A 256 ALA SER ARG GLU ALA SER PHE ILE THR GLY THR THR LEU SEQRES 20 A 256 MET VAL ASP GLY GLY LEU HIS ILE MET SEQRES 1 B 256 SER ARG MET ALA GLY ARG THR ALA LEU ILE THR GLY ALA SEQRES 2 B 256 GLY ALA GLY ILE GLY ALA ALA ALA SER HIS LEU PHE CYS SEQRES 3 B 256 LYS GLU GLY ALA ALA VAL LEU MET VAL ASP ALA ASN ALA SEQRES 4 B 256 GLU ALA LEU GLU ARG THR ARG GLU ALA ILE LEU GLN ALA SEQRES 5 B 256 VAL PRO GLY ALA ARG LEU ALA CYS VAL MET ALA ASP VAL SEQRES 6 B 256 SER ASP GLU SER ALA ALA ALA ALA ALA VAL GLY GLN CYS SEQRES 7 B 256 VAL GLN GLN TRP GLY GLY LEU ASP THR LEU VAL ASN ASN SEQRES 8 B 256 ALA ALA MET ARG ASN TYR SER ALA ALA ALA ASP ALA THR SEQRES 9 B 256 ALA ALA GLU TRP GLN ALA MET VAL GLY VAL ASN LEU VAL SEQRES 10 B 256 GLY MET SER ASN TYR CYS ARG ALA ALA LEU PRO ALA LEU SEQRES 11 B 256 ARG GLN SER GLY THR GLY SER ILE VAL ASN VAL SER SER SEQRES 12 B 256 CYS TYR ALA VAL THR GLY ARG LYS GLY MET ALA LEU TYR SEQRES 13 B 256 ASP ALA THR LYS ALA ALA GLN LEU ALA TYR THR ARG SER SEQRES 14 B 256 LEU ALA PHE GLU GLU ALA ALA HIS GLY VAL ARG ALA ASN SEQRES 15 B 256 ALA VAL CYS PRO GLY SER THR LEU THR ASP PHE HIS VAL SEQRES 16 B 256 GLY ARG ALA ARG ASN ALA GLY LYS SER VAL GLU GLN LEU SEQRES 17 B 256 ARG THR GLU ARG LYS ASP THR SER LEU ILE GLY ARG TRP SEQRES 18 B 256 ALA SER PRO GLU GLU ILE ALA TRP PRO ILE PHE TRP LEU SEQRES 19 B 256 ALA SER ARG GLU ALA SER PHE ILE THR GLY THR THR LEU SEQRES 20 B 256 MET VAL ASP GLY GLY LEU HIS ILE MET HET EDO A 301 10 HET EDO B 301 10 HET EDO B 302 10 HET EDO B 303 10 HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 EDO 4(C2 H6 O2) FORMUL 7 HOH *262(H2 O) HELIX 1 AA1 ALA A 18 GLU A 31 1 14 HELIX 2 AA2 ASN A 41 VAL A 56 1 16 HELIX 3 AA3 ASP A 70 GLY A 86 1 17 HELIX 4 AA4 ALA A 102 ALA A 106 5 5 HELIX 5 AA5 THR A 107 LEU A 119 1 13 HELIX 6 AA6 LEU A 119 GLY A 137 1 19 HELIX 7 AA7 SER A 146 VAL A 150 5 5 HELIX 8 AA8 MET A 156 ALA A 178 1 23 HELIX 9 AA9 ALA A 179 GLY A 181 5 3 HELIX 10 AB1 SER A 226 SER A 239 1 14 HELIX 11 AB2 ARG A 240 SER A 243 5 4 HELIX 12 AB3 GLY A 255 MET A 259 5 5 HELIX 13 AB4 ALA B 18 GLU B 31 1 14 HELIX 14 AB5 ASN B 41 VAL B 56 1 16 HELIX 15 AB6 ASP B 70 GLY B 86 1 17 HELIX 16 AB7 ALA B 102 ALA B 106 5 5 HELIX 17 AB8 THR B 107 LEU B 119 1 13 HELIX 18 AB9 LEU B 119 GLY B 137 1 19 HELIX 19 AC1 SER B 146 VAL B 150 5 5 HELIX 20 AC2 MET B 156 ALA B 178 1 23 HELIX 21 AC3 ALA B 179 GLY B 181 5 3 HELIX 22 AC4 SER B 226 SER B 239 1 14 HELIX 23 AC5 ARG B 240 SER B 243 5 4 HELIX 24 AC6 GLY B 255 MET B 259 5 5 SHEET 1 AA1 7 ARG A 60 MET A 65 0 SHEET 2 AA1 7 ALA A 34 ASP A 39 1 N MET A 37 O ALA A 62 SHEET 3 AA1 7 THR A 10 THR A 14 1 N ALA A 11 O ALA A 34 SHEET 4 AA1 7 THR A 90 ASN A 93 1 O VAL A 92 N LEU A 12 SHEET 5 AA1 7 SER A 140 VAL A 144 1 O VAL A 144 N ASN A 93 SHEET 6 AA1 7 ARG A 183 PRO A 189 1 O ASN A 185 N ASN A 143 SHEET 7 AA1 7 THR A 249 VAL A 252 1 O LEU A 250 N ALA A 186 SHEET 1 AA2 7 LEU B 61 MET B 65 0 SHEET 2 AA2 7 ALA B 34 ASP B 39 1 N MET B 37 O ALA B 62 SHEET 3 AA2 7 THR B 10 THR B 14 1 N ILE B 13 O VAL B 38 SHEET 4 AA2 7 THR B 90 ASN B 93 1 O VAL B 92 N LEU B 12 SHEET 5 AA2 7 SER B 140 VAL B 144 1 O VAL B 144 N ASN B 93 SHEET 6 AA2 7 ARG B 183 PRO B 189 1 O ASN B 185 N ASN B 143 SHEET 7 AA2 7 THR B 249 VAL B 252 1 O LEU B 250 N ALA B 186 CRYST1 86.030 75.700 73.640 90.00 101.90 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011624 0.000000 0.002449 0.00000 SCALE2 0.000000 0.013210 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013878 0.00000 CONECT 6950 6951 6952 6954 6955 CONECT 6951 6950 6956 CONECT 6952 6950 6953 6957 6958 CONECT 6953 6952 6959 CONECT 6954 6950 CONECT 6955 6950 CONECT 6956 6951 CONECT 6957 6952 CONECT 6958 6952 CONECT 6959 6953 CONECT 6960 6961 6962 6964 6965 CONECT 6961 6960 6966 CONECT 6962 6960 6963 6967 6968 CONECT 6963 6962 6969 CONECT 6964 6960 CONECT 6965 6960 CONECT 6966 6961 CONECT 6967 6962 CONECT 6968 6962 CONECT 6969 6963 CONECT 6970 6971 6972 6974 6975 CONECT 6971 6970 6976 CONECT 6972 6970 6973 6977 6978 CONECT 6973 6972 6979 CONECT 6974 6970 CONECT 6975 6970 CONECT 6976 6971 CONECT 6977 6972 CONECT 6978 6972 CONECT 6979 6973 CONECT 6980 6981 6982 6984 6985 CONECT 6981 6980 6986 CONECT 6982 6980 6983 6987 6988 CONECT 6983 6982 6989 CONECT 6984 6980 CONECT 6985 6980 CONECT 6986 6981 CONECT 6987 6982 CONECT 6988 6982 CONECT 6989 6983 MASTER 398 0 4 24 14 0 0 6 3745 2 40 40 END