HEADER REPLICATION 21-APR-26 25WZ TITLE CRYO-EM STRUCTURE OF THE E. COLI BETA SLIDING CLAMP COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA SLIDING CLAMP; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: BETA CLAMP,SLIDING CLAMP,BETA-CLAMP PROCESSIVITY FACTOR,DNA COMPND 5 POLYMERASE III BETA SLIDING CLAMP SUBUNIT,DNA POLYMERASE III SUBUNIT COMPND 6 BETA; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: DNAN, Z5192, ECS4636; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693 KEYWDS DNA CLAMP, SLIDING CLAMP, DNA POLYMERASE III SUBUNIT, PROCESSIVITY- KEYWDS 2 PROMOTING FACTOR, REPLICATION EXPDTA ELECTRON MICROSCOPY AUTHOR X.JIANG,R.DANEV,M.KIKKAWA REVDAT 1 07-OCT-26 25WZ 0 JRNL AUTH X.JIANG,R.DANEV,Y.LUAN,M.NAKAKIDO,K.TSUMOTO,M.KIKKAWA JRNL TITL REVERSIBLE AUTOINHIBITION OF THE BACTERIAL JRNL TITL 2 REPLICATION-LICENSING HDA-BETA CLAMP COMPLEX. JRNL REF NUCLEIC ACIDS RES. 2026 JRNL REFN ESSN 1362-4962 REMARK 2 REMARK 2 RESOLUTION. 3.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : CRYOSPARC, SERIALEM, CRYOSPARC, PHENIX, REMARK 3 CRYOSPARC, CRYOSPARC, CRYOSPARC, REMARK 3 CRYOSPARC, PHENIX REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : AB INITIO MODEL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.550 REMARK 3 NUMBER OF PARTICLES : 89946 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 25WZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 22-APR-26. REMARK 100 THE DEPOSITION ID IS D_1300073307. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : E. COLI BETA SLIDING CLAMP REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 1.50 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : 34176 REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : JEOL CRYO ARM 200 REMARK 245 DETECTOR TYPE : GATAN K3 (6K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1000.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 1300.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 1.55 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 7640.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 80000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 200 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET B -19 REMARK 465 GLY B -18 REMARK 465 SER B -17 REMARK 465 SER B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 ARG B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 1 CG SD CE REMARK 470 LYS A 2 CG CD CE NZ REMARK 470 PHE A 3 CG CD1 CD2 CE1 CE2 CZ REMARK 470 THR A 4 OG1 CG2 REMARK 470 GLU A 6 CG CD OE1 OE2 REMARK 470 ARG A 7 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 8 CG CD OE1 OE2 REMARK 470 LEU A 10 CG CD1 CD2 REMARK 470 LEU A 11 CG CD1 CD2 REMARK 470 LEU A 14 CG CD1 CD2 REMARK 470 GLN A 15 CG CD OE1 NE2 REMARK 470 VAL A 17 CG1 CG2 REMARK 470 SER A 18 OG REMARK 470 ARG A 24 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 27 CG CD1 CD2 REMARK 470 LEU A 30 CG CD1 CD2 REMARK 470 ASN A 32 CG OD1 ND2 REMARK 470 LEU A 33 CG CD1 CD2 REMARK 470 LEU A 35 CG CD1 CD2 REMARK 470 GLN A 36 CG CD OE1 NE2 REMARK 470 LEU A 42 CG CD1 CD2 REMARK 470 LEU A 49 CG CD1 CD2 REMARK 470 GLU A 50 CG CD OE1 OE2 REMARK 470 GLU A 52 CG CD OE1 OE2 REMARK 470 ARG A 56 CG CD NE CZ NH1 NH2 REMARK 470 VAL A 57 CG1 CG2 REMARK 470 VAL A 60 CG1 CG2 REMARK 470 GLN A 61 CG CD OE1 NE2 REMARK 470 GLU A 64 CG CD OE1 OE2 REMARK 470 ARG A 73 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 77 CG OD1 OD2 REMARK 470 LEU A 82 CG CD1 CD2 REMARK 470 GLU A 84 CG CD OE1 OE2 REMARK 470 GLU A 87 CG CD OE1 OE2 REMARK 470 VAL A 90 CG1 CG2 REMARK 470 GLU A 93 CG CD OE1 OE2 REMARK 470 GLU A 95 CG CD OE1 OE2 REMARK 470 VAL A 99 CG1 CG2 REMARK 470 ARG A 103 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 105 CG CD NE CZ NH1 NH2 REMARK 470 SER A 109 OG REMARK 470 THR A 110 OG1 CG2 REMARK 470 ASN A 118 CG OD1 ND2 REMARK 470 LEU A 119 CG CD1 CD2 REMARK 470 ASP A 120 CG OD1 OD2 REMARK 470 GLN A 123 CG CD OE1 NE2 REMARK 470 GLU A 125 CG CD OE1 OE2 REMARK 470 THR A 129 OG1 CG2 REMARK 470 GLN A 132 CG CD OE1 NE2 REMARK 470 THR A 142 OG1 CG2 REMARK 470 GLN A 143 CG CD OE1 NE2 REMARK 470 MET A 146 CG SD CE REMARK 470 HIS A 148 CG ND1 CD2 CE1 NE2 REMARK 470 GLN A 149 CG CD OE1 NE2 REMARK 470 VAL A 151 CG1 CG2 REMARK 470 ARG A 152 CG CD NE CZ NH1 NH2 REMARK 470 TYR A 153 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 TYR A 154 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LEU A 155 CG CD1 CD2 REMARK 470 GLU A 161 CG CD OE1 OE2 REMARK 470 GLU A 166 CG CD OE1 OE2 REMARK 470 ARG A 168 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 176 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 186 CG CD OE1 NE2 REMARK 470 SER A 187 OG REMARK 470 LEU A 188 CG CD1 CD2 REMARK 470 SER A 190 OG REMARK 470 HIS A 191 CG ND1 CD2 CE1 NE2 REMARK 470 ARG A 197 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 198 CG CD CE NZ REMARK 470 ILE A 201 CG1 CG2 CD1 REMARK 470 GLU A 202 CG CD OE1 OE2 REMARK 470 LEU A 203 CG CD1 CD2 REMARK 470 ARG A 205 CG CD NE CZ NH1 NH2 REMARK 470 MET A 206 CG SD CE REMARK 470 LEU A 207 CG CD1 CD2 REMARK 470 ASP A 211 CG OD1 OD2 REMARK 470 ARG A 215 CG CD NE CZ NH1 NH2 REMARK 470 VAL A 216 CG1 CG2 REMARK 470 ILE A 218 CG1 CG2 CD1 REMARK 470 ILE A 231 CG1 CG2 CD1 REMARK 470 SER A 234 OG REMARK 470 LYS A 235 CG CD CE NZ REMARK 470 ASP A 238 CG OD1 OD2 REMARK 470 ARG A 240 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 250 CG CD CE NZ REMARK 470 ASN A 251 CG OD1 ND2 REMARK 470 CYS A 260 SG REMARK 470 LYS A 264 CG CD CE NZ REMARK 470 GLN A 265 CG CD OE1 NE2 REMARK 470 ARG A 269 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 272 CG1 CG2 CD1 REMARK 470 LEU A 273 CG CD1 CD2 REMARK 470 GLU A 276 CG CD OE1 OE2 REMARK 470 LYS A 277 CG CD CE NZ REMARK 470 PHE A 278 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG A 282 CG CD NE CZ NH1 NH2 REMARK 470 TYR A 284 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 VAL A 285 CG1 CG2 REMARK 470 SER A 286 OG REMARK 470 ASN A 288 CG OD1 ND2 REMARK 470 LEU A 290 CG CD1 CD2 REMARK 470 LYS A 291 CG CD CE NZ REMARK 470 ILE A 292 CG1 CG2 CD1 REMARK 470 ASN A 296 CG OD1 ND2 REMARK 470 GLU A 298 CG CD OE1 OE2 REMARK 470 GLU A 300 CG CD OE1 OE2 REMARK 470 LEU A 306 CG CD1 CD2 REMARK 470 GLU A 316 CG CD OE1 OE2 REMARK 470 PHE A 319 CG CD1 CD2 CE1 CE2 CZ REMARK 470 TYR A 323 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LEU A 331 CG CD1 CD2 REMARK 470 CYS A 333 SG REMARK 470 GLU A 334 CG CD OE1 OE2 REMARK 470 MET A 338 CG SD CE REMARK 470 MET A 339 CG SD CE REMARK 470 LEU A 340 CG CD1 CD2 REMARK 470 THR A 341 OG1 CG2 REMARK 470 SER A 345 OG REMARK 470 GLN A 348 CG CD OE1 NE2 REMARK 470 ASP A 351 CG OD1 OD2 REMARK 470 SER A 354 OG REMARK 470 GLN A 355 CG CD OE1 NE2 REMARK 470 MET A 364 CG SD CE REMARK 470 MET B 1 CG SD CE REMARK 470 LYS B 2 CG CD CE NZ REMARK 470 GLU B 6 CG CD OE1 OE2 REMARK 470 ARG B 7 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 8 CG CD OE1 OE2 REMARK 470 LEU B 11 CG CD1 CD2 REMARK 470 LYS B 12 CG CD CE NZ REMARK 470 LEU B 14 CG CD1 CD2 REMARK 470 GLN B 15 CG CD OE1 NE2 REMARK 470 VAL B 17 CG1 CG2 REMARK 470 SER B 18 OG REMARK 470 LEU B 21 CG CD1 CD2 REMARK 470 ARG B 24 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 27 CG CD1 CD2 REMARK 470 LEU B 30 CG CD1 CD2 REMARK 470 LEU B 34 CG CD1 CD2 REMARK 470 LEU B 35 CG CD1 CD2 REMARK 470 GLN B 36 CG CD OE1 NE2 REMARK 470 LEU B 42 CG CD1 CD2 REMARK 470 SER B 43 OG REMARK 470 THR B 45 OG1 CG2 REMARK 470 MET B 51 CG SD CE REMARK 470 VAL B 54 CG1 CG2 REMARK 470 ARG B 56 CG CD NE CZ NH1 NH2 REMARK 470 VAL B 57 CG1 CG2 REMARK 470 VAL B 60 CG1 CG2 REMARK 470 GLN B 61 CG CD OE1 NE2 REMARK 470 ASP B 77 CG OD1 OD2 REMARK 470 ARG B 80 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 84 CG CD OE1 OE2 REMARK 470 VAL B 90 CG1 CG2 REMARK 470 GLU B 93 CG CD OE1 OE2 REMARK 470 GLU B 95 CG CD OE1 OE2 REMARK 470 VAL B 99 CG1 CG2 REMARK 470 SER B 101 OG REMARK 470 ARG B 103 CG CD NE CZ NH1 NH2 REMARK 470 SER B 104 OG REMARK 470 PHE B 106 CG CD1 CD2 CE1 CE2 CZ REMARK 470 SER B 107 OG REMARK 470 THR B 110 OG1 CG2 REMARK 470 ASN B 118 CG OD1 ND2 REMARK 470 LEU B 119 CG CD1 CD2 REMARK 470 ASP B 120 CG OD1 OD2 REMARK 470 TRP B 122 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP B 122 CZ3 CH2 REMARK 470 GLN B 123 CG CD OE1 NE2 REMARK 470 GLN B 132 CG CD OE1 NE2 REMARK 470 LYS B 136 CG CD CE NZ REMARK 470 LEU B 138 CG CD1 CD2 REMARK 470 THR B 142 OG1 CG2 REMARK 470 GLN B 143 CG CD OE1 NE2 REMARK 470 HIS B 148 CG ND1 CD2 CE1 NE2 REMARK 470 GLN B 149 CG CD OE1 NE2 REMARK 470 VAL B 151 CG1 CG2 REMARK 470 ARG B 152 CG CD NE CZ NH1 NH2 REMARK 470 TYR B 153 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 TYR B 154 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LEU B 155 CG CD1 CD2 REMARK 470 ASN B 156 CG OD1 ND2 REMARK 470 LEU B 159 CG CD1 CD2 REMARK 470 GLU B 161 CG CD OE1 OE2 REMARK 470 GLU B 165 CG CD OE1 OE2 REMARK 470 ARG B 168 CG CD NE CZ NH1 NH2 REMARK 470 THR B 169 OG1 CG2 REMARK 470 THR B 172 OG1 CG2 REMARK 470 ARG B 176 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 177 CG CD1 CD2 REMARK 470 CYS B 180 SG REMARK 470 SER B 181 OG REMARK 470 GLN B 186 CG CD OE1 NE2 REMARK 470 PRO B 189 CG CD REMARK 470 SER B 190 OG REMARK 470 HIS B 191 CG ND1 CD2 CE1 NE2 REMARK 470 SER B 192 OG REMARK 470 LYS B 198 CG CD CE NZ REMARK 470 GLU B 202 CG CD OE1 OE2 REMARK 470 LEU B 203 CG CD1 CD2 REMARK 470 ARG B 205 CG CD NE CZ NH1 NH2 REMARK 470 MET B 206 CG SD CE REMARK 470 ASP B 211 CG OD1 OD2 REMARK 470 ARG B 215 CG CD NE CZ NH1 NH2 REMARK 470 VAL B 216 CG1 CG2 REMARK 470 GLN B 217 CG CD OE1 NE2 REMARK 470 ILE B 218 CG1 CG2 CD1 REMARK 470 SER B 220 OG REMARK 470 HIS B 226 CG ND1 CD2 CE1 NE2 REMARK 470 ASP B 229 CG OD1 OD2 REMARK 470 PHE B 230 CG CD1 CD2 CE1 CE2 CZ REMARK 470 SER B 234 OG REMARK 470 LYS B 235 CG CD CE NZ REMARK 470 LEU B 236 CG CD1 CD2 REMARK 470 VAL B 237 CG1 CG2 REMARK 470 ASP B 238 CG OD1 OD2 REMARK 470 ARG B 240 CG CD NE CZ NH1 NH2 REMARK 470 PHE B 241 CG CD1 CD2 CE1 CE2 CZ REMARK 470 VAL B 247 CG1 CG2 REMARK 470 ASN B 251 CG OD1 ND2 REMARK 470 ASP B 253 CG OD1 OD2 REMARK 470 CYS B 260 SG REMARK 470 LYS B 264 CG CD CE NZ REMARK 470 ILE B 272 CG1 CG2 CD1 REMARK 470 LEU B 273 CG CD1 CD2 REMARK 470 GLU B 276 CG CD OE1 OE2 REMARK 470 LYS B 277 CG CD CE NZ REMARK 470 PHE B 278 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG B 282 CG CD NE CZ NH1 NH2 REMARK 470 VAL B 285 CG1 CG2 REMARK 470 LYS B 291 CG CD CE NZ REMARK 470 ILE B 292 CG1 CG2 CD1 REMARK 470 THR B 293 OG1 CG2 REMARK 470 ASN B 296 CG OD1 ND2 REMARK 470 GLU B 298 CG CD OE1 OE2 REMARK 470 GLN B 299 CG CD OE1 NE2 REMARK 470 GLU B 300 CG CD OE1 OE2 REMARK 470 GLU B 304 CG CD OE1 OE2 REMARK 470 LEU B 306 CG CD1 CD2 REMARK 470 ASP B 307 CG OD1 OD2 REMARK 470 GLU B 314 CG CD OE1 OE2 REMARK 470 MET B 315 CG SD CE REMARK 470 GLU B 316 CG CD OE1 OE2 REMARK 470 PHE B 319 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU B 334 CG CD OE1 OE2 REMARK 470 MET B 338 CG SD CE REMARK 470 MET B 339 CG SD CE REMARK 470 LEU B 340 CG CD1 CD2 REMARK 470 THR B 341 OG1 CG2 REMARK 470 ASP B 342 CG OD1 OD2 REMARK 470 SER B 343 OG REMARK 470 SER B 345 OG REMARK 470 SER B 346 OG REMARK 470 GLN B 348 CG CD OE1 NE2 REMARK 470 ASP B 351 CG OD1 OD2 REMARK 470 ARG B 365 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 366 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP B 261 CB - CG - OD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 2 138.82 -170.12 REMARK 500 LEU A 10 -3.40 -140.35 REMARK 500 LEU A 49 -7.50 72.13 REMARK 500 GLU A 95 32.88 -98.15 REMARK 500 ASN A 221 25.65 -140.04 REMARK 500 LEU B 49 -4.61 72.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 25SA RELATED DB: PDB REMARK 900 SOLVED FROM THE SAME EM DATASET REMARK 900 RELATED ID: 25RY RELATED DB: PDB REMARK 900 SOLVED FROM THE SAME EM DATASET REMARK 900 RELATED ID: 25RZ RELATED DB: PDB REMARK 900 SOLVED FROM THE SAME EM DATASET REMARK 900 RELATED ID: EMD-80433 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF THE E. COLI BETA SLIDING CLAMP DBREF 25WZ A 1 366 UNP P0A990 DPO3B_ECO57 1 366 DBREF 25WZ B 1 366 UNP P0A990 DPO3B_ECO57 1 366 SEQADV 25WZ MET A -19 UNP P0A990 INITIATING METHIONINE SEQADV 25WZ GLY A -18 UNP P0A990 EXPRESSION TAG SEQADV 25WZ SER A -17 UNP P0A990 EXPRESSION TAG SEQADV 25WZ SER A -16 UNP P0A990 EXPRESSION TAG SEQADV 25WZ HIS A -15 UNP P0A990 EXPRESSION TAG SEQADV 25WZ HIS A -14 UNP P0A990 EXPRESSION TAG SEQADV 25WZ HIS A -13 UNP P0A990 EXPRESSION TAG SEQADV 25WZ HIS A -12 UNP P0A990 EXPRESSION TAG SEQADV 25WZ HIS A -11 UNP P0A990 EXPRESSION TAG SEQADV 25WZ HIS A -10 UNP P0A990 EXPRESSION TAG SEQADV 25WZ SER A -9 UNP P0A990 EXPRESSION TAG SEQADV 25WZ SER A -8 UNP P0A990 EXPRESSION TAG SEQADV 25WZ GLY A -7 UNP P0A990 EXPRESSION TAG SEQADV 25WZ LEU A -6 UNP P0A990 EXPRESSION TAG SEQADV 25WZ VAL A -5 UNP P0A990 EXPRESSION TAG SEQADV 25WZ PRO A -4 UNP P0A990 EXPRESSION TAG SEQADV 25WZ ARG A -3 UNP P0A990 EXPRESSION TAG SEQADV 25WZ GLY A -2 UNP P0A990 EXPRESSION TAG SEQADV 25WZ SER A -1 UNP P0A990 EXPRESSION TAG SEQADV 25WZ HIS A 0 UNP P0A990 EXPRESSION TAG SEQADV 25WZ MET B -19 UNP P0A990 INITIATING METHIONINE SEQADV 25WZ GLY B -18 UNP P0A990 EXPRESSION TAG SEQADV 25WZ SER B -17 UNP P0A990 EXPRESSION TAG SEQADV 25WZ SER B -16 UNP P0A990 EXPRESSION TAG SEQADV 25WZ HIS B -15 UNP P0A990 EXPRESSION TAG SEQADV 25WZ HIS B -14 UNP P0A990 EXPRESSION TAG SEQADV 25WZ HIS B -13 UNP P0A990 EXPRESSION TAG SEQADV 25WZ HIS B -12 UNP P0A990 EXPRESSION TAG SEQADV 25WZ HIS B -11 UNP P0A990 EXPRESSION TAG SEQADV 25WZ HIS B -10 UNP P0A990 EXPRESSION TAG SEQADV 25WZ SER B -9 UNP P0A990 EXPRESSION TAG SEQADV 25WZ SER B -8 UNP P0A990 EXPRESSION TAG SEQADV 25WZ GLY B -7 UNP P0A990 EXPRESSION TAG SEQADV 25WZ LEU B -6 UNP P0A990 EXPRESSION TAG SEQADV 25WZ VAL B -5 UNP P0A990 EXPRESSION TAG SEQADV 25WZ PRO B -4 UNP P0A990 EXPRESSION TAG SEQADV 25WZ ARG B -3 UNP P0A990 EXPRESSION TAG SEQADV 25WZ GLY B -2 UNP P0A990 EXPRESSION TAG SEQADV 25WZ SER B -1 UNP P0A990 EXPRESSION TAG SEQADV 25WZ HIS B 0 UNP P0A990 EXPRESSION TAG SEQRES 1 A 386 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 386 LEU VAL PRO ARG GLY SER HIS MET LYS PHE THR VAL GLU SEQRES 3 A 386 ARG GLU HIS LEU LEU LYS PRO LEU GLN GLN VAL SER GLY SEQRES 4 A 386 PRO LEU GLY GLY ARG PRO THR LEU PRO ILE LEU GLY ASN SEQRES 5 A 386 LEU LEU LEU GLN VAL ALA ASP GLY THR LEU SER LEU THR SEQRES 6 A 386 GLY THR ASP LEU GLU MET GLU MET VAL ALA ARG VAL ALA SEQRES 7 A 386 LEU VAL GLN PRO HIS GLU PRO GLY ALA THR THR VAL PRO SEQRES 8 A 386 ALA ARG LYS PHE PHE ASP ILE CYS ARG GLY LEU PRO GLU SEQRES 9 A 386 GLY ALA GLU ILE ALA VAL GLN LEU GLU GLY GLU ARG MET SEQRES 10 A 386 LEU VAL ARG SER GLY ARG SER ARG PHE SER LEU SER THR SEQRES 11 A 386 LEU PRO ALA ALA ASP PHE PRO ASN LEU ASP ASP TRP GLN SEQRES 12 A 386 SER GLU VAL GLU PHE THR LEU PRO GLN ALA THR MET LYS SEQRES 13 A 386 ARG LEU ILE GLU ALA THR GLN PHE SER MET ALA HIS GLN SEQRES 14 A 386 ASP VAL ARG TYR TYR LEU ASN GLY MET LEU PHE GLU THR SEQRES 15 A 386 GLU GLY GLU GLU LEU ARG THR VAL ALA THR ASP GLY HIS SEQRES 16 A 386 ARG LEU ALA VAL CYS SER MET PRO ILE GLY GLN SER LEU SEQRES 17 A 386 PRO SER HIS SER VAL ILE VAL PRO ARG LYS GLY VAL ILE SEQRES 18 A 386 GLU LEU MET ARG MET LEU ASP GLY GLY ASP ASN PRO LEU SEQRES 19 A 386 ARG VAL GLN ILE GLY SER ASN ASN ILE ARG ALA HIS VAL SEQRES 20 A 386 GLY ASP PHE ILE PHE THR SER LYS LEU VAL ASP GLY ARG SEQRES 21 A 386 PHE PRO ASP TYR ARG ARG VAL LEU PRO LYS ASN PRO ASP SEQRES 22 A 386 LYS HIS LEU GLU ALA GLY CYS ASP LEU LEU LYS GLN ALA SEQRES 23 A 386 PHE ALA ARG ALA ALA ILE LEU SER ASN GLU LYS PHE ARG SEQRES 24 A 386 GLY VAL ARG LEU TYR VAL SER GLU ASN GLN LEU LYS ILE SEQRES 25 A 386 THR ALA ASN ASN PRO GLU GLN GLU GLU ALA GLU GLU ILE SEQRES 26 A 386 LEU ASP VAL THR TYR SER GLY ALA GLU MET GLU ILE GLY SEQRES 27 A 386 PHE ASN VAL SER TYR VAL LEU ASP VAL LEU ASN ALA LEU SEQRES 28 A 386 LYS CYS GLU ASN VAL ARG MET MET LEU THR ASP SER VAL SEQRES 29 A 386 SER SER VAL GLN ILE GLU ASP ALA ALA SER GLN SER ALA SEQRES 30 A 386 ALA TYR VAL VAL MET PRO MET ARG LEU SEQRES 1 B 386 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 386 LEU VAL PRO ARG GLY SER HIS MET LYS PHE THR VAL GLU SEQRES 3 B 386 ARG GLU HIS LEU LEU LYS PRO LEU GLN GLN VAL SER GLY SEQRES 4 B 386 PRO LEU GLY GLY ARG PRO THR LEU PRO ILE LEU GLY ASN SEQRES 5 B 386 LEU LEU LEU GLN VAL ALA ASP GLY THR LEU SER LEU THR SEQRES 6 B 386 GLY THR ASP LEU GLU MET GLU MET VAL ALA ARG VAL ALA SEQRES 7 B 386 LEU VAL GLN PRO HIS GLU PRO GLY ALA THR THR VAL PRO SEQRES 8 B 386 ALA ARG LYS PHE PHE ASP ILE CYS ARG GLY LEU PRO GLU SEQRES 9 B 386 GLY ALA GLU ILE ALA VAL GLN LEU GLU GLY GLU ARG MET SEQRES 10 B 386 LEU VAL ARG SER GLY ARG SER ARG PHE SER LEU SER THR SEQRES 11 B 386 LEU PRO ALA ALA ASP PHE PRO ASN LEU ASP ASP TRP GLN SEQRES 12 B 386 SER GLU VAL GLU PHE THR LEU PRO GLN ALA THR MET LYS SEQRES 13 B 386 ARG LEU ILE GLU ALA THR GLN PHE SER MET ALA HIS GLN SEQRES 14 B 386 ASP VAL ARG TYR TYR LEU ASN GLY MET LEU PHE GLU THR SEQRES 15 B 386 GLU GLY GLU GLU LEU ARG THR VAL ALA THR ASP GLY HIS SEQRES 16 B 386 ARG LEU ALA VAL CYS SER MET PRO ILE GLY GLN SER LEU SEQRES 17 B 386 PRO SER HIS SER VAL ILE VAL PRO ARG LYS GLY VAL ILE SEQRES 18 B 386 GLU LEU MET ARG MET LEU ASP GLY GLY ASP ASN PRO LEU SEQRES 19 B 386 ARG VAL GLN ILE GLY SER ASN ASN ILE ARG ALA HIS VAL SEQRES 20 B 386 GLY ASP PHE ILE PHE THR SER LYS LEU VAL ASP GLY ARG SEQRES 21 B 386 PHE PRO ASP TYR ARG ARG VAL LEU PRO LYS ASN PRO ASP SEQRES 22 B 386 LYS HIS LEU GLU ALA GLY CYS ASP LEU LEU LYS GLN ALA SEQRES 23 B 386 PHE ALA ARG ALA ALA ILE LEU SER ASN GLU LYS PHE ARG SEQRES 24 B 386 GLY VAL ARG LEU TYR VAL SER GLU ASN GLN LEU LYS ILE SEQRES 25 B 386 THR ALA ASN ASN PRO GLU GLN GLU GLU ALA GLU GLU ILE SEQRES 26 B 386 LEU ASP VAL THR TYR SER GLY ALA GLU MET GLU ILE GLY SEQRES 27 B 386 PHE ASN VAL SER TYR VAL LEU ASP VAL LEU ASN ALA LEU SEQRES 28 B 386 LYS CYS GLU ASN VAL ARG MET MET LEU THR ASP SER VAL SEQRES 29 B 386 SER SER VAL GLN ILE GLU ASP ALA ALA SER GLN SER ALA SEQRES 30 B 386 ALA TYR VAL VAL MET PRO MET ARG LEU HELIX 1 AA1 LEU A 10 GLY A 19 1 10 HELIX 2 AA2 PRO A 20 GLY A 22 5 3 HELIX 3 AA3 ALA A 72 LEU A 82 1 11 HELIX 4 AA4 PRO A 112 PHE A 116 5 5 HELIX 5 AA5 GLN A 132 ALA A 141 1 10 HELIX 6 AA6 THR A 142 MET A 146 5 5 HELIX 7 AA7 ARG A 152 LEU A 155 5 4 HELIX 8 AA8 ARG A 197 LEU A 207 1 11 HELIX 9 AA9 CYS A 260 LEU A 273 1 14 HELIX 10 AB1 VAL A 321 LEU A 331 1 11 HELIX 11 AB2 ARG B 7 GLY B 19 1 13 HELIX 12 AB3 PRO B 20 GLY B 22 5 3 HELIX 13 AB4 ALA B 72 GLY B 81 1 10 HELIX 14 AB5 PRO B 112 PHE B 116 5 5 HELIX 15 AB6 GLN B 132 ALA B 141 1 10 HELIX 16 AB7 THR B 142 MET B 146 5 5 HELIX 17 AB8 ARG B 152 LEU B 155 5 4 HELIX 18 AB9 ARG B 197 LEU B 207 1 11 HELIX 19 AC1 CYS B 260 LEU B 273 1 14 HELIX 20 AC2 VAL B 321 LEU B 331 1 11 SHEET 1 AA1 4 LYS A 2 GLU A 6 0 SHEET 2 AA1 4 GLU A 87 GLU A 93 -1 O ILE A 88 N VAL A 5 SHEET 3 AA1 4 ARG A 96 SER A 101 -1 O ARG A 96 N GLU A 93 SHEET 4 AA1 4 SER A 104 SER A 109 -1 O PHE A 106 N VAL A 99 SHEET 1 AA2 8 GLY A 66 PRO A 71 0 SHEET 2 AA2 8 ASN A 32 ALA A 38 -1 N LEU A 33 O VAL A 70 SHEET 3 AA2 8 THR A 41 THR A 47 -1 O SER A 43 N GLN A 36 SHEET 4 AA2 8 MET A 51 ALA A 58 -1 O ALA A 55 N LEU A 44 SHEET 5 AA2 8 PHE A 230 LYS A 235 -1 O ILE A 231 N VAL A 54 SHEET 6 AA2 8 ASN A 222 VAL A 227 -1 N ILE A 223 O SER A 234 SHEET 7 AA2 8 PRO A 213 ILE A 218 -1 N ARG A 215 O HIS A 226 SHEET 8 AA2 8 VAL A 126 PRO A 131 -1 N PHE A 128 O VAL A 216 SHEET 1 AA3 8 HIS A 191 PRO A 196 0 SHEET 2 AA3 8 GLY A 157 GLU A 163 -1 N MET A 158 O VAL A 195 SHEET 3 AA3 8 GLU A 166 THR A 172 -1 O VAL A 170 N LEU A 159 SHEET 4 AA3 8 ARG A 176 PRO A 183 -1 O MET A 182 N LEU A 167 SHEET 5 AA3 8 SER A 354 VAL A 361 -1 O ALA A 358 N VAL A 179 SHEET 6 AA3 8 VAL A 347 ASP A 351 -1 N ILE A 349 O TYR A 359 SHEET 7 AA3 8 ASN A 335 LEU A 340 -1 N ARG A 337 O GLU A 350 SHEET 8 AA3 8 LYS A 254 GLY A 259 -1 N LEU A 256 O MET A 338 SHEET 1 AA4 4 ALA A 302 LEU A 306 0 SHEET 2 AA4 4 GLN A 289 ALA A 294 -1 N LEU A 290 O LEU A 306 SHEET 3 AA4 4 GLY A 280 SER A 286 -1 N TYR A 284 O LYS A 291 SHEET 4 AA4 4 MET A 315 ASN A 320 -1 O MET A 315 N VAL A 285 SHEET 1 AA5 4 LYS B 2 VAL B 5 0 SHEET 2 AA5 4 ILE B 88 GLU B 93 -1 O ILE B 88 N VAL B 5 SHEET 3 AA5 4 ARG B 96 SER B 101 -1 O LEU B 98 N GLN B 91 SHEET 4 AA5 4 SER B 104 SER B 109 -1 O LEU B 108 N MET B 97 SHEET 1 AA6 8 GLY B 66 PRO B 71 0 SHEET 2 AA6 8 ASN B 32 ALA B 38 -1 N LEU B 33 O VAL B 70 SHEET 3 AA6 8 THR B 41 THR B 47 -1 O SER B 43 N GLN B 36 SHEET 4 AA6 8 MET B 51 ALA B 58 -1 O ALA B 55 N LEU B 44 SHEET 5 AA6 8 PHE B 230 LYS B 235 -1 O ILE B 231 N VAL B 54 SHEET 6 AA6 8 ASN B 222 VAL B 227 -1 N ILE B 223 O SER B 234 SHEET 7 AA6 8 PRO B 213 ILE B 218 -1 N ARG B 215 O HIS B 226 SHEET 8 AA6 8 VAL B 126 PRO B 131 -1 N LEU B 130 O LEU B 214 SHEET 1 AA7 8 HIS B 191 PRO B 196 0 SHEET 2 AA7 8 GLY B 157 GLU B 163 -1 N MET B 158 O VAL B 195 SHEET 3 AA7 8 GLU B 166 THR B 172 -1 O ARG B 168 N GLU B 161 SHEET 4 AA7 8 ARG B 176 PRO B 183 -1 O MET B 182 N LEU B 167 SHEET 5 AA7 8 SER B 354 VAL B 361 -1 O ALA B 358 N VAL B 179 SHEET 6 AA7 8 VAL B 347 ASP B 351 -1 N ILE B 349 O TYR B 359 SHEET 7 AA7 8 ASN B 335 LEU B 340 -1 N ARG B 337 O GLU B 350 SHEET 8 AA7 8 LYS B 254 GLY B 259 -1 N LEU B 256 O MET B 338 SHEET 1 AA8 4 ALA B 302 LEU B 306 0 SHEET 2 AA8 4 GLN B 289 ALA B 294 -1 N LEU B 290 O LEU B 306 SHEET 3 AA8 4 GLY B 280 SER B 286 -1 N ARG B 282 O THR B 293 SHEET 4 AA8 4 MET B 315 ASN B 320 -1 O ILE B 317 N LEU B 283 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MASTER 460 0 0 20 48 0 0 6 4781 2 0 60 END