data_26JD # _entry.id 26JD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.417 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 26JD pdb_000026jd 10.2210/pdb26jd/pdb WWPDB D_1300071585 ? ? EMDB EMD-80696 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2026-11-04 ? 2 'EM metadata' 1 0 2026-11-04 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'EM metadata' repository 'Initial release' ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 26JD _pdbx_database_status.recvd_initial_deposition_date 2026-05-01 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Cryo-EM ternary structure of CD1c presenting a mycobacterial lipid to a T cell receptor' _pdbx_database_related.db_id EMD-80696 _pdbx_database_related.content_type 'associated EM volume' # loop_ _pdbx_contact_author.id _pdbx_contact_author.email _pdbx_contact_author.name_first _pdbx_contact_author.name_last _pdbx_contact_author.name_mi _pdbx_contact_author.role _pdbx_contact_author.identifier_ORCID 2 adam.shahine@monash.edu Adam Shahine ? 'principal investigator/group leader' 0000-0001-7717-4437 3 jamie.rossjohn@monash.edu Jamie Rossjohn ? 'principal investigator/group leader' 0000-0002-2020-7522 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Cao, T.P.' 1 0000-0001-9387-5460 'Shahine, A.' 2 0000-0001-7717-4437 'Rossjohn, J.' 3 0000-0002-2020-7522 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Cryo-EM ternary structure of CD1c presenting a mycobacterial lipid to a T cell receptor' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Cao, T.P.' 1 0000-0001-9387-5460 primary 'Shahine, A.' 2 0000-0001-7717-4437 primary 'Rossjohn, J.' 3 0000-0002-2020-7522 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'T-cell surface glycoprotein CD1c' 31056.789 1 ? ? ? ? 2 polymer man 'MPM7 T cell receptor beta chain' 28421.562 1 ? ? ? ? 3 polymer man 'MPM7 T cell receptor alpha chain' 22692.201 1 ? ? ? ? 4 polymer man Beta-2-microglobulin 11616.964 1 ? ? ? ? 5 non-polymer syn 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 3 ? ? ? ? 6 non-polymer syn '(4S,8S,16S,20S)-4,8,12,16,20-pentamethylheptacosyl dihydrogen phosphate' 546.846 1 ? ? ? ? 7 non-polymer syn 'N-((E,2S,3R)-1,3-DIHYDROXYOCTADEC-4-EN-2-YL)STEARAMIDE' 565.954 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;EHVSFHVIQIFSFVNQSWARGQGSGWLDELQTHGWDSESGTIIFLHNWSKGNFSNEELSDLELLFRFYLFGLTREIQDHA SQDYSKYPFEVQVKAGCELHSGKSPEGFFQVAFNGLDLLSFQNTTWVPSPGCGSLAQSVCHLLNHQYEGVTETVYNLIRS TCPRFLLGLLDAGKMYVHRQVRPEAWLSSRPSLGSGQLLLVCHASGFYPKPVWVTWMRNEQEQLGTKHGDILPNADGTWY LQVILEVASEEPAGLSCRVRHSSLGGQDIILYWGS ; ;EHVSFHVIQIFSFVNQSWARGQGSGWLDELQTHGWDSESGTIIFLHNWSKGNFSNEELSDLELLFRFYLFGLTREIQDHA SQDYSKYPFEVQVKAGCELHSGKSPEGFFQVAFNGLDLLSFQNTTWVPSPGCGSLAQSVCHLLNHQYEGVTETVYNLIRS TCPRFLLGLLDAGKMYVHRQVRPEAWLSSRPSLGSGQLLLVCHASGFYPKPVWVTWMRNEQEQLGTKHGDILPNADGTWY LQVILEVASEEPAGLSCRVRHSSLGGQDIILYWGS ; C ? 2 'polypeptide(L)' no no ;DTGVSQNPRHKITKRGQNVTFRCDPISEHNRLYWYRQTLGQGPEFLTYFQNEAQLEKSRLLSDRFSAERPKGSFSTLEIQ RTEQGDSAMYLCASSWGVRRPVGSVYGYTFGSGTRLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHV ELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIV SAEAWGRAD ; ;DTGVSQNPRHKITKRGQNVTFRCDPISEHNRLYWYRQTLGQGPEFLTYFQNEAQLEKSRLLSDRFSAERPKGSFSTLEIQ RTEQGDSAMYLCASSWGVRRPVGSVYGYTFGSGTRLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHV ELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIV SAEAWGRAD ; B ? 3 'polypeptide(L)' no no ;QKIEQNSEALNIQEGKTATLTCNYTNYSPAYLQWYRQDPGRGPVFLLLIRENEKEKRKERLKVTFDTTLKQSLFHITASQ PADSATYLCALGWGKLQFGAGTQVVVTPDIQNPDPAVYQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDM RSMDFKSNSAVAWSNKSDFACANAFNNSIIPEDTFFPSPESS ; ;QKIEQNSEALNIQEGKTATLTCNYTNYSPAYLQWYRQDPGRGPVFLLLIRENEKEKRKERLKVTFDTTLKQSLFHITASQ PADSATYLCALGWGKLQFGAGTQVVVTPDIQNPDPAVYQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDM RSMDFKSNSAVAWSNKSDFACANAFNNSIIPEDTFFPSPESS ; A ? 4 'polypeptide(L)' no no ;IQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYAC RVNHVTLSQPKIVKWDRD ; ;IQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYAC RVNHVTLSQPKIVKWDRD ; D ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 6 '(4S,8S,16S,20S)-4,8,12,16,20-pentamethylheptacosyl dihydrogen phosphate' Z7B 7 'N-((E,2S,3R)-1,3-DIHYDROXYOCTADEC-4-EN-2-YL)STEARAMIDE' 18C # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLU n 1 2 HIS n 1 3 VAL n 1 4 SER n 1 5 PHE n 1 6 HIS n 1 7 VAL n 1 8 ILE n 1 9 GLN n 1 10 ILE n 1 11 PHE n 1 12 SER n 1 13 PHE n 1 14 VAL n 1 15 ASN n 1 16 GLN n 1 17 SER n 1 18 TRP n 1 19 ALA n 1 20 ARG n 1 21 GLY n 1 22 GLN n 1 23 GLY n 1 24 SER n 1 25 GLY n 1 26 TRP n 1 27 LEU n 1 28 ASP n 1 29 GLU n 1 30 LEU n 1 31 GLN n 1 32 THR n 1 33 HIS n 1 34 GLY n 1 35 TRP n 1 36 ASP n 1 37 SER n 1 38 GLU n 1 39 SER n 1 40 GLY n 1 41 THR n 1 42 ILE n 1 43 ILE n 1 44 PHE n 1 45 LEU n 1 46 HIS n 1 47 ASN n 1 48 TRP n 1 49 SER n 1 50 LYS n 1 51 GLY n 1 52 ASN n 1 53 PHE n 1 54 SER n 1 55 ASN n 1 56 GLU n 1 57 GLU n 1 58 LEU n 1 59 SER n 1 60 ASP n 1 61 LEU n 1 62 GLU n 1 63 LEU n 1 64 LEU n 1 65 PHE n 1 66 ARG n 1 67 PHE n 1 68 TYR n 1 69 LEU n 1 70 PHE n 1 71 GLY n 1 72 LEU n 1 73 THR n 1 74 ARG n 1 75 GLU n 1 76 ILE n 1 77 GLN n 1 78 ASP n 1 79 HIS n 1 80 ALA n 1 81 SER n 1 82 GLN n 1 83 ASP n 1 84 TYR n 1 85 SER n 1 86 LYS n 1 87 TYR n 1 88 PRO n 1 89 PHE n 1 90 GLU n 1 91 VAL n 1 92 GLN n 1 93 VAL n 1 94 LYS n 1 95 ALA n 1 96 GLY n 1 97 CYS n 1 98 GLU n 1 99 LEU n 1 100 HIS n 1 101 SER n 1 102 GLY n 1 103 LYS n 1 104 SER n 1 105 PRO n 1 106 GLU n 1 107 GLY n 1 108 PHE n 1 109 PHE n 1 110 GLN n 1 111 VAL n 1 112 ALA n 1 113 PHE n 1 114 ASN n 1 115 GLY n 1 116 LEU n 1 117 ASP n 1 118 LEU n 1 119 LEU n 1 120 SER n 1 121 PHE n 1 122 GLN n 1 123 ASN n 1 124 THR n 1 125 THR n 1 126 TRP n 1 127 VAL n 1 128 PRO n 1 129 SER n 1 130 PRO n 1 131 GLY n 1 132 CYS n 1 133 GLY n 1 134 SER n 1 135 LEU n 1 136 ALA n 1 137 GLN n 1 138 SER n 1 139 VAL n 1 140 CYS n 1 141 HIS n 1 142 LEU n 1 143 LEU n 1 144 ASN n 1 145 HIS n 1 146 GLN n 1 147 TYR n 1 148 GLU n 1 149 GLY n 1 150 VAL n 1 151 THR n 1 152 GLU n 1 153 THR n 1 154 VAL n 1 155 TYR n 1 156 ASN n 1 157 LEU n 1 158 ILE n 1 159 ARG n 1 160 SER n 1 161 THR n 1 162 CYS n 1 163 PRO n 1 164 ARG n 1 165 PHE n 1 166 LEU n 1 167 LEU n 1 168 GLY n 1 169 LEU n 1 170 LEU n 1 171 ASP n 1 172 ALA n 1 173 GLY n 1 174 LYS n 1 175 MET n 1 176 TYR n 1 177 VAL n 1 178 HIS n 1 179 ARG n 1 180 GLN n 1 181 VAL n 1 182 ARG n 1 183 PRO n 1 184 GLU n 1 185 ALA n 1 186 TRP n 1 187 LEU n 1 188 SER n 1 189 SER n 1 190 ARG n 1 191 PRO n 1 192 SER n 1 193 LEU n 1 194 GLY n 1 195 SER n 1 196 GLY n 1 197 GLN n 1 198 LEU n 1 199 LEU n 1 200 LEU n 1 201 VAL n 1 202 CYS n 1 203 HIS n 1 204 ALA n 1 205 SER n 1 206 GLY n 1 207 PHE n 1 208 TYR n 1 209 PRO n 1 210 LYS n 1 211 PRO n 1 212 VAL n 1 213 TRP n 1 214 VAL n 1 215 THR n 1 216 TRP n 1 217 MET n 1 218 ARG n 1 219 ASN n 1 220 GLU n 1 221 GLN n 1 222 GLU n 1 223 GLN n 1 224 LEU n 1 225 GLY n 1 226 THR n 1 227 LYS n 1 228 HIS n 1 229 GLY n 1 230 ASP n 1 231 ILE n 1 232 LEU n 1 233 PRO n 1 234 ASN n 1 235 ALA n 1 236 ASP n 1 237 GLY n 1 238 THR n 1 239 TRP n 1 240 TYR n 1 241 LEU n 1 242 GLN n 1 243 VAL n 1 244 ILE n 1 245 LEU n 1 246 GLU n 1 247 VAL n 1 248 ALA n 1 249 SER n 1 250 GLU n 1 251 GLU n 1 252 PRO n 1 253 ALA n 1 254 GLY n 1 255 LEU n 1 256 SER n 1 257 CYS n 1 258 ARG n 1 259 VAL n 1 260 ARG n 1 261 HIS n 1 262 SER n 1 263 SER n 1 264 LEU n 1 265 GLY n 1 266 GLY n 1 267 GLN n 1 268 ASP n 1 269 ILE n 1 270 ILE n 1 271 LEU n 1 272 TYR n 1 273 TRP n 1 274 GLY n 1 275 SER n 2 1 ASP n 2 2 THR n 2 3 GLY n 2 4 VAL n 2 5 SER n 2 6 GLN n 2 7 ASN n 2 8 PRO n 2 9 ARG n 2 10 HIS n 2 11 LYS n 2 12 ILE n 2 13 THR n 2 14 LYS n 2 15 ARG n 2 16 GLY n 2 17 GLN n 2 18 ASN n 2 19 VAL n 2 20 THR n 2 21 PHE n 2 22 ARG n 2 23 CYS n 2 24 ASP n 2 25 PRO n 2 26 ILE n 2 27 SER n 2 28 GLU n 2 29 HIS n 2 30 ASN n 2 31 ARG n 2 32 LEU n 2 33 TYR n 2 34 TRP n 2 35 TYR n 2 36 ARG n 2 37 GLN n 2 38 THR n 2 39 LEU n 2 40 GLY n 2 41 GLN n 2 42 GLY n 2 43 PRO n 2 44 GLU n 2 45 PHE n 2 46 LEU n 2 47 THR n 2 48 TYR n 2 49 PHE n 2 50 GLN n 2 51 ASN n 2 52 GLU n 2 53 ALA n 2 54 GLN n 2 55 LEU n 2 56 GLU n 2 57 LYS n 2 58 SER n 2 59 ARG n 2 60 LEU n 2 61 LEU n 2 62 SER n 2 63 ASP n 2 64 ARG n 2 65 PHE n 2 66 SER n 2 67 ALA n 2 68 GLU n 2 69 ARG n 2 70 PRO n 2 71 LYS n 2 72 GLY n 2 73 SER n 2 74 PHE n 2 75 SER n 2 76 THR n 2 77 LEU n 2 78 GLU n 2 79 ILE n 2 80 GLN n 2 81 ARG n 2 82 THR n 2 83 GLU n 2 84 GLN n 2 85 GLY n 2 86 ASP n 2 87 SER n 2 88 ALA n 2 89 MET n 2 90 TYR n 2 91 LEU n 2 92 CYS n 2 93 ALA n 2 94 SER n 2 95 SER n 2 96 TRP n 2 97 GLY n 2 98 VAL n 2 99 ARG n 2 100 ARG n 2 101 PRO n 2 102 VAL n 2 103 GLY n 2 104 SER n 2 105 VAL n 2 106 TYR n 2 107 GLY n 2 108 TYR n 2 109 THR n 2 110 PHE n 2 111 GLY n 2 112 SER n 2 113 GLY n 2 114 THR n 2 115 ARG n 2 116 LEU n 2 117 THR n 2 118 VAL n 2 119 VAL n 2 120 GLU n 2 121 ASP n 2 122 LEU n 2 123 ASN n 2 124 LYS n 2 125 VAL n 2 126 PHE n 2 127 PRO n 2 128 PRO n 2 129 GLU n 2 130 VAL n 2 131 ALA n 2 132 VAL n 2 133 PHE n 2 134 GLU n 2 135 PRO n 2 136 SER n 2 137 GLU n 2 138 ALA n 2 139 GLU n 2 140 ILE n 2 141 SER n 2 142 HIS n 2 143 THR n 2 144 GLN n 2 145 LYS n 2 146 ALA n 2 147 THR n 2 148 LEU n 2 149 VAL n 2 150 CYS n 2 151 LEU n 2 152 ALA n 2 153 THR n 2 154 GLY n 2 155 PHE n 2 156 TYR n 2 157 PRO n 2 158 ASP n 2 159 HIS n 2 160 VAL n 2 161 GLU n 2 162 LEU n 2 163 SER n 2 164 TRP n 2 165 TRP n 2 166 VAL n 2 167 ASN n 2 168 GLY n 2 169 LYS n 2 170 GLU n 2 171 VAL n 2 172 HIS n 2 173 SER n 2 174 GLY n 2 175 VAL n 2 176 CYS n 2 177 THR n 2 178 ASP n 2 179 PRO n 2 180 GLN n 2 181 PRO n 2 182 LEU n 2 183 LYS n 2 184 GLU n 2 185 GLN n 2 186 PRO n 2 187 ALA n 2 188 LEU n 2 189 ASN n 2 190 ASP n 2 191 SER n 2 192 ARG n 2 193 TYR n 2 194 ALA n 2 195 LEU n 2 196 SER n 2 197 SER n 2 198 ARG n 2 199 LEU n 2 200 ARG n 2 201 VAL n 2 202 SER n 2 203 ALA n 2 204 THR n 2 205 PHE n 2 206 TRP n 2 207 GLN n 2 208 ASN n 2 209 PRO n 2 210 ARG n 2 211 ASN n 2 212 HIS n 2 213 PHE n 2 214 ARG n 2 215 CYS n 2 216 GLN n 2 217 VAL n 2 218 GLN n 2 219 PHE n 2 220 TYR n 2 221 GLY n 2 222 LEU n 2 223 SER n 2 224 GLU n 2 225 ASN n 2 226 ASP n 2 227 GLU n 2 228 TRP n 2 229 THR n 2 230 GLN n 2 231 ASP n 2 232 ARG n 2 233 ALA n 2 234 LYS n 2 235 PRO n 2 236 VAL n 2 237 THR n 2 238 GLN n 2 239 ILE n 2 240 VAL n 2 241 SER n 2 242 ALA n 2 243 GLU n 2 244 ALA n 2 245 TRP n 2 246 GLY n 2 247 ARG n 2 248 ALA n 2 249 ASP n 3 1 GLN n 3 2 LYS n 3 3 ILE n 3 4 GLU n 3 5 GLN n 3 6 ASN n 3 7 SER n 3 8 GLU n 3 9 ALA n 3 10 LEU n 3 11 ASN n 3 12 ILE n 3 13 GLN n 3 14 GLU n 3 15 GLY n 3 16 LYS n 3 17 THR n 3 18 ALA n 3 19 THR n 3 20 LEU n 3 21 THR n 3 22 CYS n 3 23 ASN n 3 24 TYR n 3 25 THR n 3 26 ASN n 3 27 TYR n 3 28 SER n 3 29 PRO n 3 30 ALA n 3 31 TYR n 3 32 LEU n 3 33 GLN n 3 34 TRP n 3 35 TYR n 3 36 ARG n 3 37 GLN n 3 38 ASP n 3 39 PRO n 3 40 GLY n 3 41 ARG n 3 42 GLY n 3 43 PRO n 3 44 VAL n 3 45 PHE n 3 46 LEU n 3 47 LEU n 3 48 LEU n 3 49 ILE n 3 50 ARG n 3 51 GLU n 3 52 ASN n 3 53 GLU n 3 54 LYS n 3 55 GLU n 3 56 LYS n 3 57 ARG n 3 58 LYS n 3 59 GLU n 3 60 ARG n 3 61 LEU n 3 62 LYS n 3 63 VAL n 3 64 THR n 3 65 PHE n 3 66 ASP n 3 67 THR n 3 68 THR n 3 69 LEU n 3 70 LYS n 3 71 GLN n 3 72 SER n 3 73 LEU n 3 74 PHE n 3 75 HIS n 3 76 ILE n 3 77 THR n 3 78 ALA n 3 79 SER n 3 80 GLN n 3 81 PRO n 3 82 ALA n 3 83 ASP n 3 84 SER n 3 85 ALA n 3 86 THR n 3 87 TYR n 3 88 LEU n 3 89 CYS n 3 90 ALA n 3 91 LEU n 3 92 GLY n 3 93 TRP n 3 94 GLY n 3 95 LYS n 3 96 LEU n 3 97 GLN n 3 98 PHE n 3 99 GLY n 3 100 ALA n 3 101 GLY n 3 102 THR n 3 103 GLN n 3 104 VAL n 3 105 VAL n 3 106 VAL n 3 107 THR n 3 108 PRO n 3 109 ASP n 3 110 ILE n 3 111 GLN n 3 112 ASN n 3 113 PRO n 3 114 ASP n 3 115 PRO n 3 116 ALA n 3 117 VAL n 3 118 TYR n 3 119 GLN n 3 120 LEU n 3 121 ARG n 3 122 ASP n 3 123 SER n 3 124 LYS n 3 125 SER n 3 126 SER n 3 127 ASP n 3 128 LYS n 3 129 SER n 3 130 VAL n 3 131 CYS n 3 132 LEU n 3 133 PHE n 3 134 THR n 3 135 ASP n 3 136 PHE n 3 137 ASP n 3 138 SER n 3 139 GLN n 3 140 THR n 3 141 ASN n 3 142 VAL n 3 143 SER n 3 144 GLN n 3 145 SER n 3 146 LYS n 3 147 ASP n 3 148 SER n 3 149 ASP n 3 150 VAL n 3 151 TYR n 3 152 ILE n 3 153 THR n 3 154 ASP n 3 155 LYS n 3 156 CYS n 3 157 VAL n 3 158 LEU n 3 159 ASP n 3 160 MET n 3 161 ARG n 3 162 SER n 3 163 MET n 3 164 ASP n 3 165 PHE n 3 166 LYS n 3 167 SER n 3 168 ASN n 3 169 SER n 3 170 ALA n 3 171 VAL n 3 172 ALA n 3 173 TRP n 3 174 SER n 3 175 ASN n 3 176 LYS n 3 177 SER n 3 178 ASP n 3 179 PHE n 3 180 ALA n 3 181 CYS n 3 182 ALA n 3 183 ASN n 3 184 ALA n 3 185 PHE n 3 186 ASN n 3 187 ASN n 3 188 SER n 3 189 ILE n 3 190 ILE n 3 191 PRO n 3 192 GLU n 3 193 ASP n 3 194 THR n 3 195 PHE n 3 196 PHE n 3 197 PRO n 3 198 SER n 3 199 PRO n 3 200 GLU n 3 201 SER n 3 202 SER n 4 1 ILE n 4 2 GLN n 4 3 ARG n 4 4 THR n 4 5 PRO n 4 6 LYS n 4 7 ILE n 4 8 GLN n 4 9 VAL n 4 10 TYR n 4 11 SER n 4 12 ARG n 4 13 HIS n 4 14 PRO n 4 15 ALA n 4 16 GLU n 4 17 ASN n 4 18 GLY n 4 19 LYS n 4 20 SER n 4 21 ASN n 4 22 PHE n 4 23 LEU n 4 24 ASN n 4 25 CYS n 4 26 TYR n 4 27 VAL n 4 28 SER n 4 29 GLY n 4 30 PHE n 4 31 HIS n 4 32 PRO n 4 33 SER n 4 34 ASP n 4 35 ILE n 4 36 GLU n 4 37 VAL n 4 38 ASP n 4 39 LEU n 4 40 LEU n 4 41 LYS n 4 42 ASN n 4 43 GLY n 4 44 GLU n 4 45 ARG n 4 46 ILE n 4 47 GLU n 4 48 LYS n 4 49 VAL n 4 50 GLU n 4 51 HIS n 4 52 SER n 4 53 ASP n 4 54 LEU n 4 55 SER n 4 56 PHE n 4 57 SER n 4 58 LYS n 4 59 ASP n 4 60 TRP n 4 61 SER n 4 62 PHE n 4 63 TYR n 4 64 LEU n 4 65 LEU n 4 66 TYR n 4 67 TYR n 4 68 THR n 4 69 GLU n 4 70 PHE n 4 71 THR n 4 72 PRO n 4 73 THR n 4 74 GLU n 4 75 LYS n 4 76 ASP n 4 77 GLU n 4 78 TYR n 4 79 ALA n 4 80 CYS n 4 81 ARG n 4 82 VAL n 4 83 ASN n 4 84 HIS n 4 85 VAL n 4 86 THR n 4 87 LEU n 4 88 SER n 4 89 GLN n 4 90 PRO n 4 91 LYS n 4 92 ILE n 4 93 VAL n 4 94 LYS n 4 95 TRP n 4 96 ASP n 4 97 ARG n 4 98 ASP n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 275 human ? CD1C ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? Kidney ? Embryo ? ? ? 'GnTI(-)' ? ? HEK293S ? ? plasmid ? ? ? pHLSEC ? ? 2 1 sample 'Biological sequence' 1 249 ? ? 'TRBV7-9, TRBJ1-2' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli BL21(DE3)' 469008 ? ? ? ? ? ? ? ? ? ? ? ? ? ? plasmid ? ? ? pET30a ? ? 3 1 sample 'Biological sequence' 1 202 ? ? 'TRAV6; TRAJ24' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli BL21(DE3)' 469008 ? ? ? ? ? ? ? ? ? ? ? ? ? ? plasmid ? ? ? pET30a ? ? 4 1 sample 'Biological sequence' 1 98 human ? 'B2M, CDABP0092, HDCMA22P' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? Kidney ? Embryo ? ? ? 'GnTI(-)' ? ? HEK293S ? ? plasmid ? ? ? pHLSEC ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 18C non-polymer . 'N-((E,2S,3R)-1,3-DIHYDROXYOCTADEC-4-EN-2-YL)STEARAMIDE' ;C18-CERAMIDE; N-STEAROYL-D-ERYTHRO-SPHINGOSINE; (2S,3R,4E)-2-STEAROYLAMINOOCTADEC-4-ENE-1,3-DIOL; (2S,3R,4E)-2-STEAROYLAMINO-1,3-OCTADEC-4-ENEDIOL ; 'C36 H71 N O3' 565.954 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 Z7B non-polymer . '(4S,8S,16S,20S)-4,8,12,16,20-pentamethylheptacosyl dihydrogen phosphate' ? 'C32 H67 O4 P' 546.846 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLU 1 6 ? ? ? C . n A 1 2 HIS 2 7 7 HIS HIS C . n A 1 3 VAL 3 8 8 VAL VAL C . n A 1 4 SER 4 9 9 SER SER C . n A 1 5 PHE 5 10 10 PHE PHE C . n A 1 6 HIS 6 11 11 HIS HIS C . n A 1 7 VAL 7 12 12 VAL VAL C . n A 1 8 ILE 8 13 13 ILE ILE C . n A 1 9 GLN 9 14 14 GLN GLN C . n A 1 10 ILE 10 15 15 ILE ILE C . n A 1 11 PHE 11 16 16 PHE PHE C . n A 1 12 SER 12 17 17 SER SER C . n A 1 13 PHE 13 18 18 PHE PHE C . n A 1 14 VAL 14 19 19 VAL VAL C . n A 1 15 ASN 15 20 20 ASN ASN C . n A 1 16 GLN 16 21 21 GLN GLN C . n A 1 17 SER 17 22 22 SER SER C . n A 1 18 TRP 18 23 23 TRP TRP C . n A 1 19 ALA 19 24 24 ALA ALA C . n A 1 20 ARG 20 25 25 ARG ARG C . n A 1 21 GLY 21 26 26 GLY GLY C . n A 1 22 GLN 22 27 27 GLN GLN C . n A 1 23 GLY 23 28 28 GLY GLY C . n A 1 24 SER 24 29 29 SER SER C . n A 1 25 GLY 25 30 30 GLY GLY C . n A 1 26 TRP 26 31 31 TRP TRP C . n A 1 27 LEU 27 32 32 LEU LEU C . n A 1 28 ASP 28 33 33 ASP ASP C . n A 1 29 GLU 29 34 34 GLU GLU C . n A 1 30 LEU 30 35 35 LEU LEU C . n A 1 31 GLN 31 36 36 GLN GLN C . n A 1 32 THR 32 37 37 THR THR C . n A 1 33 HIS 33 38 38 HIS HIS C . n A 1 34 GLY 34 39 39 GLY GLY C . n A 1 35 TRP 35 40 40 TRP TRP C . n A 1 36 ASP 36 41 41 ASP ASP C . n A 1 37 SER 37 42 42 SER SER C . n A 1 38 GLU 38 43 43 GLU GLU C . n A 1 39 SER 39 44 44 SER SER C . n A 1 40 GLY 40 45 45 GLY GLY C . n A 1 41 THR 41 46 46 THR THR C . n A 1 42 ILE 42 47 47 ILE ILE C . n A 1 43 ILE 43 48 48 ILE ILE C . n A 1 44 PHE 44 49 49 PHE PHE C . n A 1 45 LEU 45 50 50 LEU LEU C . n A 1 46 HIS 46 51 51 HIS HIS C . n A 1 47 ASN 47 52 52 ASN ASN C . n A 1 48 TRP 48 53 53 TRP TRP C . n A 1 49 SER 49 54 54 SER SER C . n A 1 50 LYS 50 55 55 LYS LYS C . n A 1 51 GLY 51 56 56 GLY GLY C . n A 1 52 ASN 52 57 57 ASN ASN C . n A 1 53 PHE 53 58 58 PHE PHE C . n A 1 54 SER 54 59 59 SER SER C . n A 1 55 ASN 55 60 60 ASN ASN C . n A 1 56 GLU 56 61 61 GLU GLU C . n A 1 57 GLU 57 62 62 GLU GLU C . n A 1 58 LEU 58 63 63 LEU LEU C . n A 1 59 SER 59 64 64 SER SER C . n A 1 60 ASP 60 65 65 ASP ASP C . n A 1 61 LEU 61 66 66 LEU LEU C . n A 1 62 GLU 62 67 67 GLU GLU C . n A 1 63 LEU 63 68 68 LEU LEU C . n A 1 64 LEU 64 69 69 LEU LEU C . n A 1 65 PHE 65 70 70 PHE PHE C . n A 1 66 ARG 66 71 71 ARG ARG C . n A 1 67 PHE 67 72 72 PHE PHE C . n A 1 68 TYR 68 73 73 TYR TYR C . n A 1 69 LEU 69 74 74 LEU LEU C . n A 1 70 PHE 70 75 75 PHE PHE C . n A 1 71 GLY 71 76 76 GLY GLY C . n A 1 72 LEU 72 77 77 LEU LEU C . n A 1 73 THR 73 78 78 THR THR C . n A 1 74 ARG 74 79 79 ARG ARG C . n A 1 75 GLU 75 80 80 GLU GLU C . n A 1 76 ILE 76 81 81 ILE ILE C . n A 1 77 GLN 77 82 82 GLN GLN C . n A 1 78 ASP 78 83 83 ASP ASP C . n A 1 79 HIS 79 84 84 HIS HIS C . n A 1 80 ALA 80 85 85 ALA ALA C . n A 1 81 SER 81 86 86 SER SER C . n A 1 82 GLN 82 87 87 GLN GLN C . n A 1 83 ASP 83 88 88 ASP ASP C . n A 1 84 TYR 84 89 89 TYR TYR C . n A 1 85 SER 85 90 90 SER SER C . n A 1 86 LYS 86 91 91 LYS LYS C . n A 1 87 TYR 87 92 92 TYR TYR C . n A 1 88 PRO 88 93 93 PRO PRO C . n A 1 89 PHE 89 94 94 PHE PHE C . n A 1 90 GLU 90 95 95 GLU GLU C . n A 1 91 VAL 91 96 96 VAL VAL C . n A 1 92 GLN 92 97 97 GLN GLN C . n A 1 93 VAL 93 98 98 VAL VAL C . n A 1 94 LYS 94 99 99 LYS LYS C . n A 1 95 ALA 95 100 100 ALA ALA C . n A 1 96 GLY 96 101 101 GLY GLY C . n A 1 97 CYS 97 102 102 CYS CYS C . n A 1 98 GLU 98 103 103 GLU GLU C . n A 1 99 LEU 99 104 104 LEU LEU C . n A 1 100 HIS 100 105 105 HIS HIS C . n A 1 101 SER 101 106 106 SER SER C . n A 1 102 GLY 102 107 ? ? ? C . n A 1 103 LYS 103 108 ? ? ? C . n A 1 104 SER 104 109 109 SER SER C . n A 1 105 PRO 105 110 110 PRO PRO C . n A 1 106 GLU 106 111 111 GLU GLU C . n A 1 107 GLY 107 112 112 GLY GLY C . n A 1 108 PHE 108 113 113 PHE PHE C . n A 1 109 PHE 109 114 114 PHE PHE C . n A 1 110 GLN 110 115 115 GLN GLN C . n A 1 111 VAL 111 116 116 VAL VAL C . n A 1 112 ALA 112 117 117 ALA ALA C . n A 1 113 PHE 113 118 118 PHE PHE C . n A 1 114 ASN 114 119 119 ASN ASN C . n A 1 115 GLY 115 120 120 GLY GLY C . n A 1 116 LEU 116 121 121 LEU LEU C . n A 1 117 ASP 117 122 122 ASP ASP C . n A 1 118 LEU 118 123 123 LEU LEU C . n A 1 119 LEU 119 124 124 LEU LEU C . n A 1 120 SER 120 125 125 SER SER C . n A 1 121 PHE 121 126 126 PHE PHE C . n A 1 122 GLN 122 127 127 GLN GLN C . n A 1 123 ASN 123 128 128 ASN ASN C . n A 1 124 THR 124 129 129 THR THR C . n A 1 125 THR 125 130 130 THR THR C . n A 1 126 TRP 126 131 131 TRP TRP C . n A 1 127 VAL 127 132 132 VAL VAL C . n A 1 128 PRO 128 133 133 PRO PRO C . n A 1 129 SER 129 134 134 SER SER C . n A 1 130 PRO 130 135 135 PRO PRO C . n A 1 131 GLY 131 136 136 GLY GLY C . n A 1 132 CYS 132 137 137 CYS CYS C . n A 1 133 GLY 133 138 138 GLY GLY C . n A 1 134 SER 134 139 139 SER SER C . n A 1 135 LEU 135 140 140 LEU LEU C . n A 1 136 ALA 136 141 141 ALA ALA C . n A 1 137 GLN 137 142 142 GLN GLN C . n A 1 138 SER 138 143 143 SER SER C . n A 1 139 VAL 139 144 144 VAL VAL C . n A 1 140 CYS 140 145 145 CYS CYS C . n A 1 141 HIS 141 146 146 HIS HIS C . n A 1 142 LEU 142 147 147 LEU LEU C . n A 1 143 LEU 143 148 148 LEU LEU C . n A 1 144 ASN 144 149 149 ASN ASN C . n A 1 145 HIS 145 150 150 HIS HIS C . n A 1 146 GLN 146 151 151 GLN GLN C . n A 1 147 TYR 147 152 152 TYR TYR C . n A 1 148 GLU 148 153 153 GLU GLU C . n A 1 149 GLY 149 154 154 GLY GLY C . n A 1 150 VAL 150 155 155 VAL VAL C . n A 1 151 THR 151 156 156 THR THR C . n A 1 152 GLU 152 157 157 GLU GLU C . n A 1 153 THR 153 158 158 THR THR C . n A 1 154 VAL 154 159 159 VAL VAL C . n A 1 155 TYR 155 160 160 TYR TYR C . n A 1 156 ASN 156 161 161 ASN ASN C . n A 1 157 LEU 157 162 162 LEU LEU C . n A 1 158 ILE 158 163 163 ILE ILE C . n A 1 159 ARG 159 164 164 ARG ARG C . n A 1 160 SER 160 165 165 SER SER C . n A 1 161 THR 161 166 166 THR THR C . n A 1 162 CYS 162 167 167 CYS CYS C . n A 1 163 PRO 163 168 168 PRO PRO C . n A 1 164 ARG 164 169 169 ARG ARG C . n A 1 165 PHE 165 170 170 PHE PHE C . n A 1 166 LEU 166 171 171 LEU LEU C . n A 1 167 LEU 167 172 172 LEU LEU C . n A 1 168 GLY 168 173 173 GLY GLY C . n A 1 169 LEU 169 174 174 LEU LEU C . n A 1 170 LEU 170 175 175 LEU LEU C . n A 1 171 ASP 171 176 176 ASP ASP C . n A 1 172 ALA 172 177 177 ALA ALA C . n A 1 173 GLY 173 178 178 GLY GLY C . n A 1 174 LYS 174 179 179 LYS LYS C . n A 1 175 MET 175 180 180 MET MET C . n A 1 176 TYR 176 181 181 TYR TYR C . n A 1 177 VAL 177 182 182 VAL VAL C . n A 1 178 HIS 178 183 183 HIS HIS C . n A 1 179 ARG 179 184 184 ARG ARG C . n A 1 180 GLN 180 185 185 GLN GLN C . n A 1 181 VAL 181 186 186 VAL VAL C . n A 1 182 ARG 182 187 187 ARG ARG C . n A 1 183 PRO 183 188 188 PRO PRO C . n A 1 184 GLU 184 189 189 GLU GLU C . n A 1 185 ALA 185 190 190 ALA ALA C . n A 1 186 TRP 186 191 191 TRP TRP C . n A 1 187 LEU 187 192 192 LEU LEU C . n A 1 188 SER 188 193 193 SER SER C . n A 1 189 SER 189 194 194 SER SER C . n A 1 190 ARG 190 195 195 ARG ARG C . n A 1 191 PRO 191 196 196 PRO PRO C . n A 1 192 SER 192 197 ? ? ? C . n A 1 193 LEU 193 198 ? ? ? C . n A 1 194 GLY 194 199 ? ? ? C . n A 1 195 SER 195 200 ? ? ? C . n A 1 196 GLY 196 201 ? ? ? C . n A 1 197 GLN 197 202 ? ? ? C . n A 1 198 LEU 198 203 203 LEU LEU C . n A 1 199 LEU 199 204 204 LEU LEU C . n A 1 200 LEU 200 205 205 LEU LEU C . n A 1 201 VAL 201 206 206 VAL VAL C . n A 1 202 CYS 202 207 207 CYS CYS C . n A 1 203 HIS 203 208 208 HIS HIS C . n A 1 204 ALA 204 209 209 ALA ALA C . n A 1 205 SER 205 210 210 SER SER C . n A 1 206 GLY 206 211 211 GLY GLY C . n A 1 207 PHE 207 212 212 PHE PHE C . n A 1 208 TYR 208 213 213 TYR TYR C . n A 1 209 PRO 209 214 214 PRO PRO C . n A 1 210 LYS 210 215 215 LYS LYS C . n A 1 211 PRO 211 216 216 PRO PRO C . n A 1 212 VAL 212 217 217 VAL VAL C . n A 1 213 TRP 213 218 218 TRP TRP C . n A 1 214 VAL 214 219 219 VAL VAL C . n A 1 215 THR 215 220 220 THR THR C . n A 1 216 TRP 216 221 221 TRP TRP C . n A 1 217 MET 217 222 222 MET MET C . n A 1 218 ARG 218 223 223 ARG ARG C . n A 1 219 ASN 219 224 ? ? ? C . n A 1 220 GLU 220 225 ? ? ? C . n A 1 221 GLN 221 226 ? ? ? C . n A 1 222 GLU 222 227 ? ? ? C . n A 1 223 GLN 223 228 ? ? ? C . n A 1 224 LEU 224 229 ? ? ? C . n A 1 225 GLY 225 230 ? ? ? C . n A 1 226 THR 226 231 231 THR THR C . n A 1 227 LYS 227 232 232 LYS LYS C . n A 1 228 HIS 228 233 233 HIS HIS C . n A 1 229 GLY 229 234 234 GLY GLY C . n A 1 230 ASP 230 235 235 ASP ASP C . n A 1 231 ILE 231 236 236 ILE ILE C . n A 1 232 LEU 232 237 237 LEU LEU C . n A 1 233 PRO 233 238 238 PRO PRO C . n A 1 234 ASN 234 239 239 ASN ASN C . n A 1 235 ALA 235 240 240 ALA ALA C . n A 1 236 ASP 236 241 241 ASP ASP C . n A 1 237 GLY 237 242 242 GLY GLY C . n A 1 238 THR 238 243 243 THR THR C . n A 1 239 TRP 239 244 244 TRP TRP C . n A 1 240 TYR 240 245 245 TYR TYR C . n A 1 241 LEU 241 246 246 LEU LEU C . n A 1 242 GLN 242 247 247 GLN GLN C . n A 1 243 VAL 243 248 248 VAL VAL C . n A 1 244 ILE 244 249 249 ILE ILE C . n A 1 245 LEU 245 250 250 LEU LEU C . n A 1 246 GLU 246 251 251 GLU GLU C . n A 1 247 VAL 247 252 ? ? ? C . n A 1 248 ALA 248 253 ? ? ? C . n A 1 249 SER 249 254 ? ? ? C . n A 1 250 GLU 250 255 ? ? ? C . n A 1 251 GLU 251 256 ? ? ? C . n A 1 252 PRO 252 257 ? ? ? C . n A 1 253 ALA 253 258 ? ? ? C . n A 1 254 GLY 254 259 ? ? ? C . n A 1 255 LEU 255 260 260 LEU LEU C . n A 1 256 SER 256 261 261 SER SER C . n A 1 257 CYS 257 262 262 CYS CYS C . n A 1 258 ARG 258 263 263 ARG ARG C . n A 1 259 VAL 259 264 264 VAL VAL C . n A 1 260 ARG 260 265 265 ARG ARG C . n A 1 261 HIS 261 266 266 HIS HIS C . n A 1 262 SER 262 267 267 SER SER C . n A 1 263 SER 263 268 268 SER SER C . n A 1 264 LEU 264 269 269 LEU LEU C . n A 1 265 GLY 265 270 270 GLY GLY C . n A 1 266 GLY 266 271 ? ? ? C . n A 1 267 GLN 267 272 ? ? ? C . n A 1 268 ASP 268 273 273 ASP ASP C . n A 1 269 ILE 269 274 274 ILE ILE C . n A 1 270 ILE 270 275 275 ILE ILE C . n A 1 271 LEU 271 276 276 LEU LEU C . n A 1 272 TYR 272 277 277 TYR TYR C . n A 1 273 TRP 273 278 278 TRP TRP C . n A 1 274 GLY 274 279 ? ? ? C . n A 1 275 SER 275 280 ? ? ? C . n B 2 1 ASP 1 1 ? ? ? B . n B 2 2 THR 2 2 ? ? ? B . n B 2 3 GLY 3 3 3 GLY GLY B . n B 2 4 VAL 4 4 4 VAL VAL B . n B 2 5 SER 5 5 5 SER SER B . n B 2 6 GLN 6 6 6 GLN GLN B . n B 2 7 ASN 7 7 7 ASN ASN B . n B 2 8 PRO 8 8 8 PRO PRO B . n B 2 9 ARG 9 9 9 ARG ARG B . n B 2 10 HIS 10 10 10 HIS HIS B . n B 2 11 LYS 11 11 11 LYS LYS B . n B 2 12 ILE 12 12 12 ILE ILE B . n B 2 13 THR 13 13 13 THR THR B . n B 2 14 LYS 14 14 14 LYS LYS B . n B 2 15 ARG 15 15 15 ARG ARG B . n B 2 16 GLY 16 16 16 GLY GLY B . n B 2 17 GLN 17 17 17 GLN GLN B . n B 2 18 ASN 18 18 18 ASN ASN B . n B 2 19 VAL 19 19 19 VAL VAL B . n B 2 20 THR 20 20 20 THR THR B . n B 2 21 PHE 21 21 21 PHE PHE B . n B 2 22 ARG 22 22 22 ARG ARG B . n B 2 23 CYS 23 23 23 CYS CYS B . n B 2 24 ASP 24 24 24 ASP ASP B . n B 2 25 PRO 25 25 25 PRO PRO B . n B 2 26 ILE 26 26 26 ILE ILE B . n B 2 27 SER 27 27 27 SER SER B . n B 2 28 GLU 28 28 28 GLU GLU B . n B 2 29 HIS 29 29 29 HIS HIS B . n B 2 30 ASN 30 37 37 ASN ASN B . n B 2 31 ARG 31 38 38 ARG ARG B . n B 2 32 LEU 32 39 39 LEU LEU B . n B 2 33 TYR 33 40 40 TYR TYR B . n B 2 34 TRP 34 41 41 TRP TRP B . n B 2 35 TYR 35 42 42 TYR TYR B . n B 2 36 ARG 36 43 43 ARG ARG B . n B 2 37 GLN 37 44 44 GLN GLN B . n B 2 38 THR 38 45 45 THR THR B . n B 2 39 LEU 39 46 46 LEU LEU B . n B 2 40 GLY 40 47 47 GLY GLY B . n B 2 41 GLN 41 48 48 GLN GLN B . n B 2 42 GLY 42 49 49 GLY GLY B . n B 2 43 PRO 43 50 50 PRO PRO B . n B 2 44 GLU 44 51 51 GLU GLU B . n B 2 45 PHE 45 52 52 PHE PHE B . n B 2 46 LEU 46 53 53 LEU LEU B . n B 2 47 THR 47 54 54 THR THR B . n B 2 48 TYR 48 55 55 TYR TYR B . n B 2 49 PHE 49 56 56 PHE PHE B . n B 2 50 GLN 50 57 57 GLN GLN B . n B 2 51 ASN 51 58 58 ASN ASN B . n B 2 52 GLU 52 63 63 GLU GLU B . n B 2 53 ALA 53 64 64 ALA ALA B . n B 2 54 GLN 54 65 65 GLN GLN B . n B 2 55 LEU 55 66 66 LEU LEU B . n B 2 56 GLU 56 67 67 GLU GLU B . n B 2 57 LYS 57 68 68 LYS LYS B . n B 2 58 SER 58 69 69 SER SER B . n B 2 59 ARG 59 70 70 ARG ARG B . n B 2 60 LEU 60 71 71 LEU LEU B . n B 2 61 LEU 61 72 72 LEU LEU B . n B 2 62 SER 62 73 73 SER SER B . n B 2 63 ASP 63 74 74 ASP ASP B . n B 2 64 ARG 64 75 75 ARG ARG B . n B 2 65 PHE 65 76 76 PHE PHE B . n B 2 66 SER 66 77 77 SER SER B . n B 2 67 ALA 67 78 78 ALA ALA B . n B 2 68 GLU 68 79 79 GLU GLU B . n B 2 69 ARG 69 80 80 ARG ARG B . n B 2 70 PRO 70 81 81 PRO PRO B . n B 2 71 LYS 71 83 83 LYS LYS B . n B 2 72 GLY 72 84 84 GLY GLY B . n B 2 73 SER 73 85 85 SER SER B . n B 2 74 PHE 74 86 86 PHE PHE B . n B 2 75 SER 75 87 87 SER SER B . n B 2 76 THR 76 88 88 THR THR B . n B 2 77 LEU 77 89 89 LEU LEU B . n B 2 78 GLU 78 90 90 GLU GLU B . n B 2 79 ILE 79 91 91 ILE ILE B . n B 2 80 GLN 80 92 92 GLN GLN B . n B 2 81 ARG 81 93 93 ARG ARG B . n B 2 82 THR 82 94 94 THR THR B . n B 2 83 GLU 83 95 95 GLU GLU B . n B 2 84 GLN 84 96 96 GLN GLN B . n B 2 85 GLY 85 97 97 GLY GLY B . n B 2 86 ASP 86 98 98 ASP ASP B . n B 2 87 SER 87 99 99 SER SER B . n B 2 88 ALA 88 100 100 ALA ALA B . n B 2 89 MET 89 101 101 MET MET B . n B 2 90 TYR 90 102 102 TYR TYR B . n B 2 91 LEU 91 103 103 LEU LEU B . n B 2 92 CYS 92 104 104 CYS CYS B . n B 2 93 ALA 93 105 105 ALA ALA B . n B 2 94 SER 94 106 106 SER SER B . n B 2 95 SER 95 107 107 SER SER B . n B 2 96 TRP 96 108 108 TRP TRP B . n B 2 97 GLY 97 109 109 GLY GLY B . n B 2 98 VAL 98 110 110 VAL VAL B . n B 2 99 ARG 99 111 111 ARG ARG B . n B 2 100 ARG 100 112 112 ARG ARG B . n B 2 101 PRO 101 113 113 PRO PRO B . n B 2 102 VAL 102 114 114 VAL VAL B . n B 2 103 GLY 103 115 115 GLY GLY B . n B 2 104 SER 104 116 116 SER SER B . n B 2 105 VAL 105 117 117 VAL VAL B . n B 2 106 TYR 106 118 118 TYR TYR B . n B 2 107 GLY 107 119 119 GLY GLY B . n B 2 108 TYR 108 120 120 TYR TYR B . n B 2 109 THR 109 121 121 THR THR B . n B 2 110 PHE 110 122 122 PHE PHE B . n B 2 111 GLY 111 123 123 GLY GLY B . n B 2 112 SER 112 124 124 SER SER B . n B 2 113 GLY 113 125 125 GLY GLY B . n B 2 114 THR 114 126 126 THR THR B . n B 2 115 ARG 115 127 127 ARG ARG B . n B 2 116 LEU 116 128 128 LEU LEU B . n B 2 117 THR 117 129 129 THR THR B . n B 2 118 VAL 118 130 130 VAL VAL B . n B 2 119 VAL 119 131 131 VAL VAL B . n B 2 120 GLU 120 132 132 GLU GLU B . n B 2 121 ASP 121 133 133 ASP ASP B . n B 2 122 LEU 122 134 134 LEU LEU B . n B 2 123 ASN 123 135 135 ASN ASN B . n B 2 124 LYS 124 136 136 LYS LYS B . n B 2 125 VAL 125 137 137 VAL VAL B . n B 2 126 PHE 126 138 138 PHE PHE B . n B 2 127 PRO 127 139 139 PRO PRO B . n B 2 128 PRO 128 140 140 PRO PRO B . n B 2 129 GLU 129 141 141 GLU GLU B . n B 2 130 VAL 130 142 142 VAL VAL B . n B 2 131 ALA 131 143 143 ALA ALA B . n B 2 132 VAL 132 144 144 VAL VAL B . n B 2 133 PHE 133 145 145 PHE PHE B . n B 2 134 GLU 134 146 146 GLU GLU B . n B 2 135 PRO 135 147 147 PRO PRO B . n B 2 136 SER 136 148 148 SER SER B . n B 2 137 GLU 137 149 149 GLU GLU B . n B 2 138 ALA 138 150 150 ALA ALA B . n B 2 139 GLU 139 151 151 GLU GLU B . n B 2 140 ILE 140 152 152 ILE ILE B . n B 2 141 SER 141 153 153 SER SER B . n B 2 142 HIS 142 154 154 HIS HIS B . n B 2 143 THR 143 155 155 THR THR B . n B 2 144 GLN 144 156 156 GLN GLN B . n B 2 145 LYS 145 157 157 LYS LYS B . n B 2 146 ALA 146 158 158 ALA ALA B . n B 2 147 THR 147 159 159 THR THR B . n B 2 148 LEU 148 160 160 LEU LEU B . n B 2 149 VAL 149 161 161 VAL VAL B . n B 2 150 CYS 150 162 162 CYS CYS B . n B 2 151 LEU 151 163 163 LEU LEU B . n B 2 152 ALA 152 164 164 ALA ALA B . n B 2 153 THR 153 165 165 THR THR B . n B 2 154 GLY 154 166 166 GLY GLY B . n B 2 155 PHE 155 167 167 PHE PHE B . n B 2 156 TYR 156 168 168 TYR TYR B . n B 2 157 PRO 157 169 169 PRO PRO B . n B 2 158 ASP 158 170 170 ASP ASP B . n B 2 159 HIS 159 171 171 HIS HIS B . n B 2 160 VAL 160 172 172 VAL VAL B . n B 2 161 GLU 161 173 173 GLU GLU B . n B 2 162 LEU 162 174 174 LEU LEU B . n B 2 163 SER 163 175 175 SER SER B . n B 2 164 TRP 164 176 176 TRP TRP B . n B 2 165 TRP 165 177 177 TRP TRP B . n B 2 166 VAL 166 178 178 VAL VAL B . n B 2 167 ASN 167 179 179 ASN ASN B . n B 2 168 GLY 168 180 180 GLY GLY B . n B 2 169 LYS 169 181 181 LYS LYS B . n B 2 170 GLU 170 182 182 GLU GLU B . n B 2 171 VAL 171 183 183 VAL VAL B . n B 2 172 HIS 172 184 184 HIS HIS B . n B 2 173 SER 173 185 185 SER SER B . n B 2 174 GLY 174 186 186 GLY GLY B . n B 2 175 VAL 175 187 187 VAL VAL B . n B 2 176 CYS 176 188 188 CYS CYS B . n B 2 177 THR 177 189 189 THR THR B . n B 2 178 ASP 178 190 190 ASP ASP B . n B 2 179 PRO 179 191 191 PRO PRO B . n B 2 180 GLN 180 192 192 GLN GLN B . n B 2 181 PRO 181 193 193 PRO PRO B . n B 2 182 LEU 182 194 194 LEU LEU B . n B 2 183 LYS 183 195 195 LYS LYS B . n B 2 184 GLU 184 196 196 GLU GLU B . n B 2 185 GLN 185 197 197 GLN GLN B . n B 2 186 PRO 186 198 198 PRO PRO B . n B 2 187 ALA 187 199 199 ALA ALA B . n B 2 188 LEU 188 200 200 LEU LEU B . n B 2 189 ASN 189 201 201 ASN ASN B . n B 2 190 ASP 190 202 202 ASP ASP B . n B 2 191 SER 191 203 203 SER SER B . n B 2 192 ARG 192 204 204 ARG ARG B . n B 2 193 TYR 193 205 205 TYR TYR B . n B 2 194 ALA 194 206 206 ALA ALA B . n B 2 195 LEU 195 207 207 LEU LEU B . n B 2 196 SER 196 208 208 SER SER B . n B 2 197 SER 197 209 209 SER SER B . n B 2 198 ARG 198 210 210 ARG ARG B . n B 2 199 LEU 199 211 211 LEU LEU B . n B 2 200 ARG 200 212 212 ARG ARG B . n B 2 201 VAL 201 213 213 VAL VAL B . n B 2 202 SER 202 214 214 SER SER B . n B 2 203 ALA 203 215 215 ALA ALA B . n B 2 204 THR 204 216 216 THR THR B . n B 2 205 PHE 205 217 217 PHE PHE B . n B 2 206 TRP 206 218 218 TRP TRP B . n B 2 207 GLN 207 219 219 GLN GLN B . n B 2 208 ASN 208 220 220 ASN ASN B . n B 2 209 PRO 209 221 221 PRO PRO B . n B 2 210 ARG 210 222 222 ARG ARG B . n B 2 211 ASN 211 223 223 ASN ASN B . n B 2 212 HIS 212 224 224 HIS HIS B . n B 2 213 PHE 213 225 225 PHE PHE B . n B 2 214 ARG 214 226 226 ARG ARG B . n B 2 215 CYS 215 227 227 CYS CYS B . n B 2 216 GLN 216 228 228 GLN GLN B . n B 2 217 VAL 217 229 229 VAL VAL B . n B 2 218 GLN 218 230 230 GLN GLN B . n B 2 219 PHE 219 231 231 PHE PHE B . n B 2 220 TYR 220 232 232 TYR TYR B . n B 2 221 GLY 221 233 233 GLY GLY B . n B 2 222 LEU 222 234 234 LEU LEU B . n B 2 223 SER 223 235 235 SER SER B . n B 2 224 GLU 224 236 236 GLU GLU B . n B 2 225 ASN 225 237 237 ASN ASN B . n B 2 226 ASP 226 238 238 ASP ASP B . n B 2 227 GLU 227 239 239 GLU GLU B . n B 2 228 TRP 228 240 240 TRP TRP B . n B 2 229 THR 229 241 241 THR THR B . n B 2 230 GLN 230 242 242 GLN GLN B . n B 2 231 ASP 231 243 243 ASP ASP B . n B 2 232 ARG 232 244 244 ARG ARG B . n B 2 233 ALA 233 245 245 ALA ALA B . n B 2 234 LYS 234 246 246 LYS LYS B . n B 2 235 PRO 235 247 247 PRO PRO B . n B 2 236 VAL 236 248 248 VAL VAL B . n B 2 237 THR 237 249 249 THR THR B . n B 2 238 GLN 238 250 250 GLN GLN B . n B 2 239 ILE 239 251 251 ILE ILE B . n B 2 240 VAL 240 252 252 VAL VAL B . n B 2 241 SER 241 253 253 SER SER B . n B 2 242 ALA 242 254 254 ALA ALA B . n B 2 243 GLU 243 255 255 GLU GLU B . n B 2 244 ALA 244 256 256 ALA ALA B . n B 2 245 TRP 245 257 257 TRP TRP B . n B 2 246 GLY 246 258 258 GLY GLY B . n B 2 247 ARG 247 259 259 ARG ARG B . n B 2 248 ALA 248 260 ? ? ? B . n B 2 249 ASP 249 261 ? ? ? B . n C 3 1 GLN 1 2 ? ? ? A . n C 3 2 LYS 2 3 ? ? ? A . n C 3 3 ILE 3 4 4 ILE ILE A . n C 3 4 GLU 4 5 5 GLU GLU A . n C 3 5 GLN 5 6 6 GLN GLN A . n C 3 6 ASN 6 7 7 ASN ASN A . n C 3 7 SER 7 8 8 SER SER A . n C 3 8 GLU 8 9 9 GLU GLU A . n C 3 9 ALA 9 10 10 ALA ALA A . n C 3 10 LEU 10 11 11 LEU LEU A . n C 3 11 ASN 11 12 12 ASN ASN A . n C 3 12 ILE 12 13 13 ILE ILE A . n C 3 13 GLN 13 14 14 GLN GLN A . n C 3 14 GLU 14 15 15 GLU GLU A . n C 3 15 GLY 15 16 16 GLY GLY A . n C 3 16 LYS 16 17 17 LYS LYS A . n C 3 17 THR 17 18 18 THR THR A . n C 3 18 ALA 18 19 19 ALA ALA A . n C 3 19 THR 19 20 20 THR THR A . n C 3 20 LEU 20 21 21 LEU LEU A . n C 3 21 THR 21 22 22 THR THR A . n C 3 22 CYS 22 23 23 CYS CYS A . n C 3 23 ASN 23 24 24 ASN ASN A . n C 3 24 TYR 24 25 25 TYR TYR A . n C 3 25 THR 25 26 26 THR THR A . n C 3 26 ASN 26 27 27 ASN ASN A . n C 3 27 TYR 27 28 28 TYR TYR A . n C 3 28 SER 28 29 29 SER SER A . n C 3 29 PRO 29 36 36 PRO PRO A . n C 3 30 ALA 30 37 37 ALA ALA A . n C 3 31 TYR 31 38 38 TYR TYR A . n C 3 32 LEU 32 39 39 LEU LEU A . n C 3 33 GLN 33 40 40 GLN GLN A . n C 3 34 TRP 34 41 41 TRP TRP A . n C 3 35 TYR 35 42 42 TYR TYR A . n C 3 36 ARG 36 43 43 ARG ARG A . n C 3 37 GLN 37 44 44 GLN GLN A . n C 3 38 ASP 38 45 45 ASP ASP A . n C 3 39 PRO 39 46 46 PRO PRO A . n C 3 40 GLY 40 47 47 GLY GLY A . n C 3 41 ARG 41 48 48 ARG ARG A . n C 3 42 GLY 42 49 49 GLY GLY A . n C 3 43 PRO 43 50 50 PRO PRO A . n C 3 44 VAL 44 51 51 VAL VAL A . n C 3 45 PHE 45 52 52 PHE PHE A . n C 3 46 LEU 46 53 53 LEU LEU A . n C 3 47 LEU 47 54 54 LEU LEU A . n C 3 48 LEU 48 55 55 LEU LEU A . n C 3 49 ILE 49 56 56 ILE ILE A . n C 3 50 ARG 50 57 57 ARG ARG A . n C 3 51 GLU 51 58 58 GLU GLU A . n C 3 52 ASN 52 59 59 ASN ASN A . n C 3 53 GLU 53 63 63 GLU GLU A . n C 3 54 LYS 54 64 64 LYS LYS A . n C 3 55 GLU 55 65 65 GLU GLU A . n C 3 56 LYS 56 66 66 LYS LYS A . n C 3 57 ARG 57 67 67 ARG ARG A . n C 3 58 LYS 58 68 68 LYS LYS A . n C 3 59 GLU 59 74 74 GLU GLU A . n C 3 60 ARG 60 75 75 ARG ARG A . n C 3 61 LEU 61 76 76 LEU LEU A . n C 3 62 LYS 62 77 77 LYS LYS A . n C 3 63 VAL 63 78 78 VAL VAL A . n C 3 64 THR 64 79 79 THR THR A . n C 3 65 PHE 65 80 80 PHE PHE A . n C 3 66 ASP 66 81 81 ASP ASP A . n C 3 67 THR 67 82 82 THR THR A . n C 3 68 THR 68 83 83 THR THR A . n C 3 69 LEU 69 84 84 LEU LEU A . n C 3 70 LYS 70 85 85 LYS LYS A . n C 3 71 GLN 71 86 86 GLN GLN A . n C 3 72 SER 72 87 87 SER SER A . n C 3 73 LEU 73 88 88 LEU LEU A . n C 3 74 PHE 74 89 89 PHE PHE A . n C 3 75 HIS 75 90 90 HIS HIS A . n C 3 76 ILE 76 91 91 ILE ILE A . n C 3 77 THR 77 92 92 THR THR A . n C 3 78 ALA 78 93 93 ALA ALA A . n C 3 79 SER 79 94 94 SER SER A . n C 3 80 GLN 80 95 95 GLN GLN A . n C 3 81 PRO 81 96 96 PRO PRO A . n C 3 82 ALA 82 97 97 ALA ALA A . n C 3 83 ASP 83 98 98 ASP ASP A . n C 3 84 SER 84 99 99 SER SER A . n C 3 85 ALA 85 100 100 ALA ALA A . n C 3 86 THR 86 101 101 THR THR A . n C 3 87 TYR 87 102 102 TYR TYR A . n C 3 88 LEU 88 103 103 LEU LEU A . n C 3 89 CYS 89 104 104 CYS CYS A . n C 3 90 ALA 90 105 105 ALA ALA A . n C 3 91 LEU 91 106 106 LEU LEU A . n C 3 92 GLY 92 107 107 GLY GLY A . n C 3 93 TRP 93 108 108 TRP TRP A . n C 3 94 GLY 94 109 109 GLY GLY A . n C 3 95 LYS 95 110 110 LYS LYS A . n C 3 96 LEU 96 111 111 LEU LEU A . n C 3 97 GLN 97 112 112 GLN GLN A . n C 3 98 PHE 98 113 113 PHE PHE A . n C 3 99 GLY 99 114 114 GLY GLY A . n C 3 100 ALA 100 115 115 ALA ALA A . n C 3 101 GLY 101 116 116 GLY GLY A . n C 3 102 THR 102 117 117 THR THR A . n C 3 103 GLN 103 118 118 GLN GLN A . n C 3 104 VAL 104 119 119 VAL VAL A . n C 3 105 VAL 105 120 120 VAL VAL A . n C 3 106 VAL 106 121 121 VAL VAL A . n C 3 107 THR 107 122 122 THR THR A . n C 3 108 PRO 108 123 123 PRO PRO A . n C 3 109 ASP 109 124 124 ASP ASP A . n C 3 110 ILE 110 125 125 ILE ILE A . n C 3 111 GLN 111 126 126 GLN GLN A . n C 3 112 ASN 112 127 127 ASN ASN A . n C 3 113 PRO 113 128 128 PRO PRO A . n C 3 114 ASP 114 129 129 ASP ASP A . n C 3 115 PRO 115 130 130 PRO PRO A . n C 3 116 ALA 116 131 131 ALA ALA A . n C 3 117 VAL 117 132 132 VAL VAL A . n C 3 118 TYR 118 133 133 TYR TYR A . n C 3 119 GLN 119 134 134 GLN GLN A . n C 3 120 LEU 120 135 135 LEU LEU A . n C 3 121 ARG 121 136 136 ARG ARG A . n C 3 122 ASP 122 137 137 ASP ASP A . n C 3 123 SER 123 138 138 SER SER A . n C 3 124 LYS 124 139 ? ? ? A . n C 3 125 SER 125 140 140 SER SER A . n C 3 126 SER 126 141 141 SER SER A . n C 3 127 ASP 127 142 142 ASP ASP A . n C 3 128 LYS 128 143 143 LYS LYS A . n C 3 129 SER 129 144 144 SER SER A . n C 3 130 VAL 130 145 145 VAL VAL A . n C 3 131 CYS 131 146 146 CYS CYS A . n C 3 132 LEU 132 147 147 LEU LEU A . n C 3 133 PHE 133 148 148 PHE PHE A . n C 3 134 THR 134 149 149 THR THR A . n C 3 135 ASP 135 150 150 ASP ASP A . n C 3 136 PHE 136 151 151 PHE PHE A . n C 3 137 ASP 137 152 152 ASP ASP A . n C 3 138 SER 138 153 153 SER SER A . n C 3 139 GLN 139 154 ? ? ? A . n C 3 140 THR 140 155 155 THR THR A . n C 3 141 ASN 141 156 156 ASN ASN A . n C 3 142 VAL 142 157 157 VAL VAL A . n C 3 143 SER 143 158 158 SER SER A . n C 3 144 GLN 144 159 ? ? ? A . n C 3 145 SER 145 160 ? ? ? A . n C 3 146 LYS 146 161 ? ? ? A . n C 3 147 ASP 147 162 ? ? ? A . n C 3 148 SER 148 163 ? ? ? A . n C 3 149 ASP 149 164 164 ASP ASP A . n C 3 150 VAL 150 165 165 VAL VAL A . n C 3 151 TYR 151 166 166 TYR TYR A . n C 3 152 ILE 152 167 167 ILE ILE A . n C 3 153 THR 153 168 168 THR THR A . n C 3 154 ASP 154 169 169 ASP ASP A . n C 3 155 LYS 155 170 170 LYS LYS A . n C 3 156 CYS 156 171 171 CYS CYS A . n C 3 157 VAL 157 172 172 VAL VAL A . n C 3 158 LEU 158 173 173 LEU LEU A . n C 3 159 ASP 159 174 174 ASP ASP A . n C 3 160 MET 160 175 175 MET MET A . n C 3 161 ARG 161 176 176 ARG ARG A . n C 3 162 SER 162 177 177 SER SER A . n C 3 163 MET 163 178 178 MET MET A . n C 3 164 ASP 164 179 179 ASP ASP A . n C 3 165 PHE 165 180 180 PHE PHE A . n C 3 166 LYS 166 181 181 LYS LYS A . n C 3 167 SER 167 182 182 SER SER A . n C 3 168 ASN 168 183 183 ASN ASN A . n C 3 169 SER 169 184 184 SER SER A . n C 3 170 ALA 170 185 185 ALA ALA A . n C 3 171 VAL 171 186 186 VAL VAL A . n C 3 172 ALA 172 187 187 ALA ALA A . n C 3 173 TRP 173 188 188 TRP TRP A . n C 3 174 SER 174 189 189 SER SER A . n C 3 175 ASN 175 190 190 ASN ASN A . n C 3 176 LYS 176 191 191 LYS LYS A . n C 3 177 SER 177 192 ? ? ? A . n C 3 178 ASP 178 193 ? ? ? A . n C 3 179 PHE 179 194 ? ? ? A . n C 3 180 ALA 180 195 ? ? ? A . n C 3 181 CYS 181 196 196 CYS CYS A . n C 3 182 ALA 182 197 197 ALA ALA A . n C 3 183 ASN 183 198 198 ASN ASN A . n C 3 184 ALA 184 199 199 ALA ALA A . n C 3 185 PHE 185 200 200 PHE PHE A . n C 3 186 ASN 186 201 ? ? ? A . n C 3 187 ASN 187 202 ? ? ? A . n C 3 188 SER 188 203 ? ? ? A . n C 3 189 ILE 189 204 ? ? ? A . n C 3 190 ILE 190 205 ? ? ? A . n C 3 191 PRO 191 206 ? ? ? A . n C 3 192 GLU 192 207 ? ? ? A . n C 3 193 ASP 193 208 ? ? ? A . n C 3 194 THR 194 209 ? ? ? A . n C 3 195 PHE 195 210 ? ? ? A . n C 3 196 PHE 196 211 ? ? ? A . n C 3 197 PRO 197 212 ? ? ? A . n C 3 198 SER 198 213 ? ? ? A . n C 3 199 PRO 199 214 ? ? ? A . n C 3 200 GLU 200 215 ? ? ? A . n C 3 201 SER 201 216 ? ? ? A . n C 3 202 SER 202 217 ? ? ? A . n D 4 1 ILE 1 11 11 ILE ILE D . n D 4 2 GLN 2 12 12 GLN GLN D . n D 4 3 ARG 3 13 13 ARG ARG D . n D 4 4 THR 4 14 14 THR THR D . n D 4 5 PRO 5 15 15 PRO PRO D . n D 4 6 LYS 6 16 16 LYS LYS D . n D 4 7 ILE 7 17 17 ILE ILE D . n D 4 8 GLN 8 18 18 GLN GLN D . n D 4 9 VAL 9 19 19 VAL VAL D . n D 4 10 TYR 10 20 20 TYR TYR D . n D 4 11 SER 11 21 21 SER SER D . n D 4 12 ARG 12 22 22 ARG ARG D . n D 4 13 HIS 13 23 23 HIS HIS D . n D 4 14 PRO 14 24 24 PRO PRO D . n D 4 15 ALA 15 25 25 ALA ALA D . n D 4 16 GLU 16 26 26 GLU GLU D . n D 4 17 ASN 17 27 27 ASN ASN D . n D 4 18 GLY 18 28 28 GLY GLY D . n D 4 19 LYS 19 29 29 LYS LYS D . n D 4 20 SER 20 30 30 SER SER D . n D 4 21 ASN 21 31 31 ASN ASN D . n D 4 22 PHE 22 32 32 PHE PHE D . n D 4 23 LEU 23 33 33 LEU LEU D . n D 4 24 ASN 24 34 34 ASN ASN D . n D 4 25 CYS 25 35 35 CYS CYS D . n D 4 26 TYR 26 36 36 TYR TYR D . n D 4 27 VAL 27 37 37 VAL VAL D . n D 4 28 SER 28 38 38 SER SER D . n D 4 29 GLY 29 39 39 GLY GLY D . n D 4 30 PHE 30 40 40 PHE PHE D . n D 4 31 HIS 31 41 41 HIS HIS D . n D 4 32 PRO 32 42 42 PRO PRO D . n D 4 33 SER 33 43 43 SER SER D . n D 4 34 ASP 34 44 44 ASP ASP D . n D 4 35 ILE 35 45 45 ILE ILE D . n D 4 36 GLU 36 46 46 GLU GLU D . n D 4 37 VAL 37 47 47 VAL VAL D . n D 4 38 ASP 38 48 48 ASP ASP D . n D 4 39 LEU 39 49 49 LEU LEU D . n D 4 40 LEU 40 50 50 LEU LEU D . n D 4 41 LYS 41 51 51 LYS LYS D . n D 4 42 ASN 42 52 52 ASN ASN D . n D 4 43 GLY 43 53 53 GLY GLY D . n D 4 44 GLU 44 54 54 GLU GLU D . n D 4 45 ARG 45 55 55 ARG ARG D . n D 4 46 ILE 46 56 56 ILE ILE D . n D 4 47 GLU 47 57 57 GLU GLU D . n D 4 48 LYS 48 58 58 LYS LYS D . n D 4 49 VAL 49 59 59 VAL VAL D . n D 4 50 GLU 50 60 60 GLU GLU D . n D 4 51 HIS 51 61 61 HIS HIS D . n D 4 52 SER 52 62 62 SER SER D . n D 4 53 ASP 53 63 63 ASP ASP D . n D 4 54 LEU 54 64 64 LEU LEU D . n D 4 55 SER 55 65 65 SER SER D . n D 4 56 PHE 56 66 66 PHE PHE D . n D 4 57 SER 57 67 67 SER SER D . n D 4 58 LYS 58 68 68 LYS LYS D . n D 4 59 ASP 59 69 69 ASP ASP D . n D 4 60 TRP 60 70 70 TRP TRP D . n D 4 61 SER 61 71 71 SER SER D . n D 4 62 PHE 62 72 72 PHE PHE D . n D 4 63 TYR 63 73 73 TYR TYR D . n D 4 64 LEU 64 74 74 LEU LEU D . n D 4 65 LEU 65 75 75 LEU LEU D . n D 4 66 TYR 66 76 76 TYR TYR D . n D 4 67 TYR 67 77 77 TYR TYR D . n D 4 68 THR 68 78 78 THR THR D . n D 4 69 GLU 69 79 79 GLU GLU D . n D 4 70 PHE 70 80 80 PHE PHE D . n D 4 71 THR 71 81 81 THR THR D . n D 4 72 PRO 72 82 82 PRO PRO D . n D 4 73 THR 73 83 83 THR THR D . n D 4 74 GLU 74 84 84 GLU GLU D . n D 4 75 LYS 75 85 ? ? ? D . n D 4 76 ASP 76 86 86 ASP ASP D . n D 4 77 GLU 77 87 87 GLU GLU D . n D 4 78 TYR 78 88 88 TYR TYR D . n D 4 79 ALA 79 89 89 ALA ALA D . n D 4 80 CYS 80 90 90 CYS CYS D . n D 4 81 ARG 81 91 91 ARG ARG D . n D 4 82 VAL 82 92 92 VAL VAL D . n D 4 83 ASN 83 93 93 ASN ASN D . n D 4 84 HIS 84 94 94 HIS HIS D . n D 4 85 VAL 85 95 95 VAL VAL D . n D 4 86 THR 86 96 96 THR THR D . n D 4 87 LEU 87 97 97 LEU LEU D . n D 4 88 SER 88 98 98 SER SER D . n D 4 89 GLN 89 99 99 GLN GLN D . n D 4 90 PRO 90 100 100 PRO PRO D . n D 4 91 LYS 91 101 101 LYS LYS D . n D 4 92 ILE 92 102 102 ILE ILE D . n D 4 93 VAL 93 103 103 VAL VAL D . n D 4 94 LYS 94 104 104 LYS LYS D . n D 4 95 TRP 95 105 105 TRP TRP D . n D 4 96 ASP 96 106 106 ASP ASP D . n D 4 97 ARG 97 107 107 ARG ARG D . n D 4 98 ASP 98 108 ? ? ? D . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id Z7B _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id Z7B _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 NAG 1 301 301 NAG NAG C . F 5 NAG 1 302 302 NAG NAG C . G 5 NAG 1 303 303 NAG NAG C . H 6 Z7B 1 304 1 Z7B PM C . I 7 18C 1 305 2 18C CER C . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 C VAL 8 ? CG1 ? A VAL 3 CG1 2 1 Y 1 C VAL 8 ? CG2 ? A VAL 3 CG2 3 1 Y 1 C SER 17 ? OG ? A SER 12 OG 4 1 Y 1 C SER 109 ? OG ? A SER 104 OG 5 1 Y 1 C LEU 203 ? CG ? A LEU 198 CG 6 1 Y 1 C LEU 203 ? CD1 ? A LEU 198 CD1 7 1 Y 1 C LEU 203 ? CD2 ? A LEU 198 CD2 8 1 Y 1 C LEU 204 ? CG ? A LEU 199 CG 9 1 Y 1 C LEU 204 ? CD1 ? A LEU 199 CD1 10 1 Y 1 C LEU 204 ? CD2 ? A LEU 199 CD2 11 1 Y 1 C MET 222 ? CG ? A MET 217 CG 12 1 Y 1 C MET 222 ? SD ? A MET 217 SD 13 1 Y 1 C MET 222 ? CE ? A MET 217 CE 14 1 Y 1 C ARG 223 ? CG ? A ARG 218 CG 15 1 Y 1 C ARG 223 ? CD ? A ARG 218 CD 16 1 Y 1 C ARG 223 ? NE ? A ARG 218 NE 17 1 Y 1 C ARG 223 ? CZ ? A ARG 218 CZ 18 1 Y 1 C ARG 223 ? NH1 ? A ARG 218 NH1 19 1 Y 1 C ARG 223 ? NH2 ? A ARG 218 NH2 20 1 Y 1 C LYS 232 ? CG ? A LYS 227 CG 21 1 Y 1 C LYS 232 ? CD ? A LYS 227 CD 22 1 Y 1 C LYS 232 ? CE ? A LYS 227 CE 23 1 Y 1 C LYS 232 ? NZ ? A LYS 227 NZ 24 1 Y 1 C LEU 250 ? CG ? A LEU 245 CG 25 1 Y 1 C LEU 250 ? CD1 ? A LEU 245 CD1 26 1 Y 1 C LEU 250 ? CD2 ? A LEU 245 CD2 27 1 Y 1 C GLU 251 ? CG ? A GLU 246 CG 28 1 Y 1 C GLU 251 ? CD ? A GLU 246 CD 29 1 Y 1 C GLU 251 ? OE1 ? A GLU 246 OE1 30 1 Y 1 C GLU 251 ? OE2 ? A GLU 246 OE2 31 1 Y 1 C LEU 260 ? CG ? A LEU 255 CG 32 1 Y 1 C LEU 260 ? CD1 ? A LEU 255 CD1 33 1 Y 1 C LEU 260 ? CD2 ? A LEU 255 CD2 34 1 Y 1 C ASP 273 ? CG ? A ASP 268 CG 35 1 Y 1 C ASP 273 ? OD1 ? A ASP 268 OD1 36 1 Y 1 C ASP 273 ? OD2 ? A ASP 268 OD2 37 1 Y 1 C ILE 274 ? CG1 ? A ILE 269 CG1 38 1 Y 1 C ILE 274 ? CG2 ? A ILE 269 CG2 39 1 Y 1 C ILE 274 ? CD1 ? A ILE 269 CD1 40 1 Y 1 C ILE 275 ? CG1 ? A ILE 270 CG1 41 1 Y 1 C ILE 275 ? CG2 ? A ILE 270 CG2 42 1 Y 1 C ILE 275 ? CD1 ? A ILE 270 CD1 43 1 Y 1 C TYR 277 ? CG ? A TYR 272 CG 44 1 Y 1 C TYR 277 ? CD1 ? A TYR 272 CD1 45 1 Y 1 C TYR 277 ? CD2 ? A TYR 272 CD2 46 1 Y 1 C TYR 277 ? CE1 ? A TYR 272 CE1 47 1 Y 1 C TYR 277 ? CE2 ? A TYR 272 CE2 48 1 Y 1 C TYR 277 ? CZ ? A TYR 272 CZ 49 1 Y 1 C TYR 277 ? OH ? A TYR 272 OH 50 1 Y 1 C TRP 278 ? CG ? A TRP 273 CG 51 1 Y 1 C TRP 278 ? CD1 ? A TRP 273 CD1 52 1 Y 1 C TRP 278 ? CD2 ? A TRP 273 CD2 53 1 Y 1 C TRP 278 ? NE1 ? A TRP 273 NE1 54 1 Y 1 C TRP 278 ? CE2 ? A TRP 273 CE2 55 1 Y 1 C TRP 278 ? CE3 ? A TRP 273 CE3 56 1 Y 1 C TRP 278 ? CZ2 ? A TRP 273 CZ2 57 1 Y 1 C TRP 278 ? CZ3 ? A TRP 273 CZ3 58 1 Y 1 C TRP 278 ? CH2 ? A TRP 273 CH2 59 1 Y 1 B GLN 156 ? CG ? B GLN 144 CG 60 1 Y 1 B GLN 156 ? CD ? B GLN 144 CD 61 1 Y 1 B GLN 156 ? OE1 ? B GLN 144 OE1 62 1 Y 1 B GLN 156 ? NE2 ? B GLN 144 NE2 63 1 Y 1 B ASN 201 ? CG ? B ASN 189 CG 64 1 Y 1 B ASN 201 ? OD1 ? B ASN 189 OD1 65 1 Y 1 B ASN 201 ? ND2 ? B ASN 189 ND2 66 1 Y 1 B SER 203 ? OG ? B SER 191 OG 67 1 Y 1 B THR 216 ? OG1 ? B THR 204 OG1 68 1 Y 1 B THR 216 ? CG2 ? B THR 204 CG2 69 1 Y 1 B GLN 219 ? CG ? B GLN 207 CG 70 1 Y 1 B GLN 219 ? CD ? B GLN 207 CD 71 1 Y 1 B GLN 219 ? OE1 ? B GLN 207 OE1 72 1 Y 1 B GLN 219 ? NE2 ? B GLN 207 NE2 73 1 Y 1 B ASN 220 ? CG ? B ASN 208 CG 74 1 Y 1 B ASN 220 ? OD1 ? B ASN 208 OD1 75 1 Y 1 B ASN 220 ? ND2 ? B ASN 208 ND2 76 1 Y 1 B ARG 222 ? CG ? B ARG 210 CG 77 1 Y 1 B ARG 222 ? CD ? B ARG 210 CD 78 1 Y 1 B ARG 222 ? NE ? B ARG 210 NE 79 1 Y 1 B ARG 222 ? CZ ? B ARG 210 CZ 80 1 Y 1 B ARG 222 ? NH1 ? B ARG 210 NH1 81 1 Y 1 B ARG 222 ? NH2 ? B ARG 210 NH2 82 1 Y 1 A GLN 126 ? CG ? C GLN 111 CG 83 1 Y 1 A GLN 126 ? CD ? C GLN 111 CD 84 1 Y 1 A GLN 126 ? OE1 ? C GLN 111 OE1 85 1 Y 1 A GLN 126 ? NE2 ? C GLN 111 NE2 86 1 Y 1 A ASN 127 ? CG ? C ASN 112 CG 87 1 Y 1 A ASN 127 ? OD1 ? C ASN 112 OD1 88 1 Y 1 A ASN 127 ? ND2 ? C ASN 112 ND2 89 1 Y 1 A ASP 137 ? CG ? C ASP 122 CG 90 1 Y 1 A ASP 137 ? OD1 ? C ASP 122 OD1 91 1 Y 1 A ASP 137 ? OD2 ? C ASP 122 OD2 92 1 Y 1 A SER 138 ? OG ? C SER 123 OG 93 1 Y 1 A ASP 152 ? CG ? C ASP 137 CG 94 1 Y 1 A ASP 152 ? OD1 ? C ASP 137 OD1 95 1 Y 1 A ASP 152 ? OD2 ? C ASP 137 OD2 96 1 Y 1 A SER 177 ? OG ? C SER 162 OG 97 1 Y 1 A MET 178 ? CG ? C MET 163 CG 98 1 Y 1 A MET 178 ? SD ? C MET 163 SD 99 1 Y 1 A MET 178 ? CE ? C MET 163 CE 100 1 Y 1 A ASP 179 ? CG ? C ASP 164 CG 101 1 Y 1 A ASP 179 ? OD1 ? C ASP 164 OD1 102 1 Y 1 A ASP 179 ? OD2 ? C ASP 164 OD2 103 1 Y 1 A LYS 191 ? CG ? C LYS 176 CG 104 1 Y 1 A LYS 191 ? CD ? C LYS 176 CD 105 1 Y 1 A LYS 191 ? CE ? C LYS 176 CE 106 1 Y 1 A LYS 191 ? NZ ? C LYS 176 NZ 107 1 Y 1 A ASN 198 ? CG ? C ASN 183 CG 108 1 Y 1 A ASN 198 ? OD1 ? C ASN 183 OD1 109 1 Y 1 A ASN 198 ? ND2 ? C ASN 183 ND2 110 1 Y 1 D LYS 29 ? CG ? D LYS 19 CG 111 1 Y 1 D LYS 29 ? CD ? D LYS 19 CD 112 1 Y 1 D LYS 29 ? CE ? D LYS 19 CE 113 1 Y 1 D LYS 29 ? NZ ? D LYS 19 NZ 114 1 Y 1 D SER 38 ? OG ? D SER 28 OG 115 1 Y 1 D LYS 51 ? CG ? D LYS 41 CG 116 1 Y 1 D LYS 51 ? CD ? D LYS 41 CD 117 1 Y 1 D LYS 51 ? CE ? D LYS 41 CE 118 1 Y 1 D LYS 51 ? NZ ? D LYS 41 NZ 119 1 Y 1 D GLU 54 ? CG ? D GLU 44 CG 120 1 Y 1 D GLU 54 ? CD ? D GLU 44 CD 121 1 Y 1 D GLU 54 ? OE1 ? D GLU 44 OE1 122 1 Y 1 D GLU 54 ? OE2 ? D GLU 44 OE2 123 1 Y 1 D ARG 55 ? CG ? D ARG 45 CG 124 1 Y 1 D ARG 55 ? CD ? D ARG 45 CD 125 1 Y 1 D ARG 55 ? NE ? D ARG 45 NE 126 1 Y 1 D ARG 55 ? CZ ? D ARG 45 CZ 127 1 Y 1 D ARG 55 ? NH1 ? D ARG 45 NH1 128 1 Y 1 D ARG 55 ? NH2 ? D ARG 45 NH2 129 1 Y 1 D GLU 57 ? CG ? D GLU 47 CG 130 1 Y 1 D GLU 57 ? CD ? D GLU 47 CD 131 1 Y 1 D GLU 57 ? OE1 ? D GLU 47 OE1 132 1 Y 1 D GLU 57 ? OE2 ? D GLU 47 OE2 133 1 Y 1 D LYS 58 ? CG ? D LYS 48 CG 134 1 Y 1 D LYS 58 ? CD ? D LYS 48 CD 135 1 Y 1 D LYS 58 ? CE ? D LYS 48 CE 136 1 Y 1 D LYS 58 ? NZ ? D LYS 48 NZ 137 1 Y 1 D GLU 79 ? CG ? D GLU 69 CG 138 1 Y 1 D GLU 79 ? CD ? D GLU 69 CD 139 1 Y 1 D GLU 79 ? OE1 ? D GLU 69 OE1 140 1 Y 1 D GLU 79 ? OE2 ? D GLU 69 OE2 141 1 Y 1 D LYS 104 ? CG ? D LYS 94 CG 142 1 Y 1 D LYS 104 ? CD ? D LYS 94 CD 143 1 Y 1 D LYS 104 ? CE ? D LYS 94 CE 144 1 Y 1 D LYS 104 ? NZ ? D LYS 94 NZ 145 1 Y 1 D ARG 107 ? CG ? D ARG 97 CG 146 1 Y 1 D ARG 107 ? CD ? D ARG 97 CD 147 1 Y 1 D ARG 107 ? NE ? D ARG 97 NE 148 1 Y 1 D ARG 107 ? CZ ? D ARG 97 CZ 149 1 Y 1 D ARG 107 ? NH1 ? D ARG 97 NH1 150 1 Y 1 D ARG 107 ? NH2 ? D ARG 97 NH2 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 26JD _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 26JD _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 26JD _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 26JD _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.90 _refine.ls_d_res_low ? _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work ? _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.correlation_coeff_I_to_Fcsqd_work ? _refine.correlation_coeff_I_to_Fcsqd_free ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'REAL-SPACE (WEIGHTED MAP SUM AT ATOM CENTERS)' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_Zscore _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.004 ? 6279 ? f_bond_d ? ? ? 'ELECTRON MICROSCOPY' ? 0.635 ? 8520 ? f_angle_d ? ? ? 'ELECTRON MICROSCOPY' ? 10.452 ? 965 ? f_dihedral_angle_d ? ? ? 'ELECTRON MICROSCOPY' ? 0.047 ? 922 ? f_chiral_restr ? ? ? 'ELECTRON MICROSCOPY' ? 0.006 ? 1087 ? f_plane_restr ? ? ? # _struct.entry_id 26JD _struct.title 'Cryo-EM ternary structure of CD1c presenting a mycobacterial lipid to a T cell receptor' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 26JD _struct_keywords.text 'CD1c, lipid-antigen presentation, T cell receptor, mycobacterial lipid, IMMUNE SYSTEM' _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? H N N 6 ? I N N 7 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP CD1C_HUMAN P29017 ? 1 ;EHVSFHVIQIFSFVNQSWARGQGSGWLDELQTHGWDSESGTIIFLHNWSKGNFSNEELSDLELLFRFYLFGLTREIQDHA SQDYSKYPFEVQVKAGCELHSGKSPEGFFQVAFNGLDLLSFQNTTWVPSPGCGSLAQSVCHLLNHQYEGVTETVYNLIRS TCPRFLLGLLDAGKMYVHRQVRPEAWLSSRPSLGSGQLLLVCHASGFYPKPVWVTWMRNEQEQLGTKHGDILPNADGTWY LQVILEVASEEPAGLSCRVRHSSLGGQDIILYWG ; 24 2 PDB 26JD 26JD ? 2 ? 1 3 PDB 26JD 26JD ? 3 ? 1 4 UNP B2MG_HUMAN P61769 ? 4 ;IQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYAC RVNHVTLSQPKIVKWDRD ; 21 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 26JD C 1 ? 274 ? P29017 24 ? 297 ? 6 279 2 2 26JD B 1 ? 249 ? 26JD 1 ? 261 ? 1 261 3 3 26JD A 1 ? 202 ? 26JD 2 ? 217 ? 2 217 4 4 26JD D 1 ? 98 ? P61769 21 ? 118 ? 11 108 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 26JD _struct_ref_seq_dif.mon_id SER _struct_ref_seq_dif.pdbx_pdb_strand_id C _struct_ref_seq_dif.seq_num 275 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P29017 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 280 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_assembly_auth_evidence.id _pdbx_struct_assembly_auth_evidence.assembly_id _pdbx_struct_assembly_auth_evidence.experimental_support _pdbx_struct_assembly_auth_evidence.details 1 1 'electron microscopy' 'Clear complex structure' 2 1 'gel filtration' 'Clear shift of retention volume to higher molecular weight region.' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 HIS A 46 ? LYS A 50 ? HIS C 51 LYS C 55 5 ? 5 HELX_P HELX_P2 AA2 SER A 54 ? GLN A 82 ? SER C 59 GLN C 87 1 ? 29 HELX_P HELX_P3 AA3 PRO A 130 ? GLY A 133 ? PRO C 135 GLY C 138 5 ? 4 HELX_P HELX_P4 AA4 LEU A 135 ? GLN A 146 ? LEU C 140 GLN C 151 1 ? 12 HELX_P HELX_P5 AA5 GLY A 149 ? SER A 160 ? GLY C 154 SER C 165 1 ? 12 HELX_P HELX_P6 AA6 SER A 160 ? HIS A 178 ? SER C 165 HIS C 183 1 ? 19 HELX_P HELX_P7 AA7 GLU B 83 ? SER B 87 ? GLU B 95 SER B 99 5 ? 5 HELX_P HELX_P8 AA8 ASP B 121 ? VAL B 125 ? ASP B 133 VAL B 137 5 ? 5 HELX_P HELX_P9 AA9 SER B 136 ? GLN B 144 ? SER B 148 GLN B 156 1 ? 9 HELX_P HELX_P10 AB1 ALA B 203 ? ASN B 208 ? ALA B 215 ASN B 220 1 ? 6 HELX_P HELX_P11 AB2 GLN C 80 ? SER C 84 ? GLN A 95 SER A 99 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 97 SG ? ? ? 1_555 A CYS 162 SG ? ? C CYS 102 C CYS 167 1_555 ? ? ? ? ? ? ? 2.034 ? ? disulf2 disulf ? ? A CYS 202 SG ? ? ? 1_555 A CYS 257 SG ? ? C CYS 207 C CYS 262 1_555 ? ? ? ? ? ? ? 2.034 ? ? disulf3 disulf ? ? B CYS 23 SG ? ? ? 1_555 B CYS 92 SG ? ? B CYS 23 B CYS 104 1_555 ? ? ? ? ? ? ? 2.027 ? ? disulf4 disulf ? ? B CYS 150 SG ? ? ? 1_555 B CYS 215 SG ? ? B CYS 162 B CYS 227 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf5 disulf ? ? C CYS 22 SG ? ? ? 1_555 C CYS 89 SG ? ? A CYS 23 A CYS 104 1_555 ? ? ? ? ? ? ? 2.026 ? ? disulf6 disulf ? ? C CYS 131 SG ? ? ? 1_555 C CYS 181 SG ? ? A CYS 146 A CYS 196 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf7 disulf ? ? D CYS 25 SG ? ? ? 1_555 D CYS 80 SG ? ? D CYS 35 D CYS 90 1_555 ? ? ? ? ? ? ? 2.031 ? ? covale1 covale one ? A ASN 15 ND2 ? ? ? 1_555 E NAG . C1 ? ? C ASN 20 C NAG 301 1_555 ? ? ? ? ? ? ? 1.462 ? N-Glycosylation covale2 covale one ? A ASN 52 ND2 ? ? ? 1_555 F NAG . C1 ? ? C ASN 57 C NAG 302 1_555 ? ? ? ? ? ? ? 1.441 ? N-Glycosylation covale3 covale one ? A ASN 123 ND2 ? ? ? 1_555 G NAG . C1 ? ? C ASN 128 C NAG 303 1_555 ? ? ? ? ? ? ? 1.443 ? N-Glycosylation # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 NAG E . ? ASN A 15 ? NAG C 301 ? 1_555 ASN C 20 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 2 NAG F . ? ASN A 52 ? NAG C 302 ? 1_555 ASN C 57 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 3 NAG G . ? ASN A 123 ? NAG C 303 ? 1_555 ASN C 128 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 4 CYS A 97 ? CYS A 162 ? CYS C 102 ? 1_555 CYS C 167 ? 1_555 SG SG . . . None 'Disulfide bridge' 5 CYS A 202 ? CYS A 257 ? CYS C 207 ? 1_555 CYS C 262 ? 1_555 SG SG . . . None 'Disulfide bridge' 6 CYS B 23 ? CYS B 92 ? CYS B 23 ? 1_555 CYS B 104 ? 1_555 SG SG . . . None 'Disulfide bridge' 7 CYS B 150 ? CYS B 215 ? CYS B 162 ? 1_555 CYS B 227 ? 1_555 SG SG . . . None 'Disulfide bridge' 8 CYS C 22 ? CYS C 89 ? CYS A 23 ? 1_555 CYS A 104 ? 1_555 SG SG . . . None 'Disulfide bridge' 9 CYS C 131 ? CYS C 181 ? CYS A 146 ? 1_555 CYS A 196 ? 1_555 SG SG . . . None 'Disulfide bridge' 10 CYS D 25 ? CYS D 80 ? CYS D 35 ? 1_555 CYS D 90 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 TYR 208 A . ? TYR 213 C PRO 209 A ? PRO 214 C 1 1.16 2 ASN 7 B . ? ASN 7 B PRO 8 B ? PRO 8 B 1 -8.98 3 TYR 156 B . ? TYR 168 B PRO 157 B ? PRO 169 B 1 4.67 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 7 ? AA2 ? 4 ? AA3 ? 4 ? AA4 ? 3 ? AA5 ? 4 ? AA6 ? 6 ? AA7 ? 4 ? AA8 ? 4 ? AA9 ? 4 ? AB1 ? 5 ? AB2 ? 5 ? AB3 ? 4 ? AB4 ? 4 ? AB5 ? 4 ? AB6 ? 4 ? AB7 ? 4 ? AB8 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA6 1 2 ? parallel AA6 2 3 ? anti-parallel AA6 3 4 ? anti-parallel AA6 4 5 ? anti-parallel AA6 5 6 ? anti-parallel AA7 1 2 ? anti-parallel AA7 2 3 ? anti-parallel AA7 3 4 ? anti-parallel AA8 1 2 ? anti-parallel AA8 2 3 ? anti-parallel AA8 3 4 ? anti-parallel AA9 1 2 ? anti-parallel AA9 2 3 ? anti-parallel AA9 3 4 ? anti-parallel AB1 1 2 ? anti-parallel AB1 2 3 ? anti-parallel AB1 3 4 ? anti-parallel AB1 4 5 ? anti-parallel AB2 1 2 ? parallel AB2 2 3 ? anti-parallel AB2 3 4 ? anti-parallel AB2 4 5 ? anti-parallel AB3 1 2 ? parallel AB3 2 3 ? anti-parallel AB3 3 4 ? anti-parallel AB4 1 2 ? anti-parallel AB4 2 3 ? anti-parallel AB4 3 4 ? anti-parallel AB5 1 2 ? anti-parallel AB5 2 3 ? anti-parallel AB5 3 4 ? anti-parallel AB6 1 2 ? anti-parallel AB6 2 3 ? anti-parallel AB6 3 4 ? anti-parallel AB7 1 2 ? anti-parallel AB7 2 3 ? anti-parallel AB7 3 4 ? anti-parallel AB8 1 2 ? anti-parallel AB8 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLN A 31 ? HIS A 33 ? GLN C 36 HIS C 38 AA1 2 TRP A 18 ? LEU A 27 ? TRP C 23 LEU C 32 AA1 3 VAL A 3 ? ASN A 15 ? VAL C 8 ASN C 20 AA1 4 PHE A 89 ? LEU A 99 ? PHE C 94 LEU C 104 AA1 5 PRO A 105 ? PHE A 113 ? PRO C 110 PHE C 118 AA1 6 LEU A 116 ? PHE A 121 ? LEU C 121 PHE C 126 AA1 7 TRP A 126 ? PRO A 128 ? TRP C 131 PRO C 133 AA2 1 GLU A 184 ? SER A 189 ? GLU C 189 SER C 194 AA2 2 LEU A 200 ? PHE A 207 ? LEU C 205 PHE C 212 AA2 3 TRP A 239 ? LEU A 245 ? TRP C 244 LEU C 250 AA2 4 LYS A 227 ? HIS A 228 ? LYS C 232 HIS C 233 AA3 1 GLU A 184 ? SER A 189 ? GLU C 189 SER C 194 AA3 2 LEU A 200 ? PHE A 207 ? LEU C 205 PHE C 212 AA3 3 TRP A 239 ? LEU A 245 ? TRP C 244 LEU C 250 AA3 4 LEU A 232 ? PRO A 233 ? LEU C 237 PRO C 238 AA4 1 THR A 215 ? TRP A 216 ? THR C 220 TRP C 221 AA4 2 CYS A 257 ? ARG A 258 ? CYS C 262 ARG C 263 AA4 3 ILE A 270 ? LEU A 271 ? ILE C 275 LEU C 276 AA5 1 SER B 5 ? ASN B 7 ? SER B 5 ASN B 7 AA5 2 VAL B 19 ? ASP B 24 ? VAL B 19 ASP B 24 AA5 3 SER B 75 ? ILE B 79 ? SER B 87 ILE B 91 AA5 4 PHE B 65 ? GLU B 68 ? PHE B 76 GLU B 79 AA6 1 HIS B 10 ? LYS B 14 ? HIS B 10 LYS B 14 AA6 2 THR B 114 ? VAL B 119 ? THR B 126 VAL B 131 AA6 3 MET B 89 ? SER B 95 ? MET B 101 SER B 107 AA6 4 ARG B 31 ? GLN B 37 ? ARG B 38 GLN B 44 AA6 5 GLU B 44 ? GLN B 50 ? GLU B 51 GLN B 57 AA6 6 GLN B 54 ? LYS B 57 ? GLN B 65 LYS B 68 AA7 1 GLU B 129 ? PHE B 133 ? GLU B 141 PHE B 145 AA7 2 LYS B 145 ? PHE B 155 ? LYS B 157 PHE B 167 AA7 3 TYR B 193 ? SER B 202 ? TYR B 205 SER B 214 AA7 4 VAL B 175 ? THR B 177 ? VAL B 187 THR B 189 AA8 1 GLU B 129 ? PHE B 133 ? GLU B 141 PHE B 145 AA8 2 LYS B 145 ? PHE B 155 ? LYS B 157 PHE B 167 AA8 3 TYR B 193 ? SER B 202 ? TYR B 205 SER B 214 AA8 4 LEU B 182 ? LYS B 183 ? LEU B 194 LYS B 195 AA9 1 LYS B 169 ? VAL B 171 ? LYS B 181 VAL B 183 AA9 2 VAL B 160 ? VAL B 166 ? VAL B 172 VAL B 178 AA9 3 CYS B 215 ? PHE B 219 ? CYS B 227 PHE B 231 AA9 4 GLN B 238 ? ALA B 242 ? GLN B 250 ALA B 254 AB1 1 GLU C 4 ? ASN C 6 ? GLU A 5 ASN A 7 AB1 2 LYS C 16 ? TYR C 24 ? LYS A 17 TYR A 25 AB1 3 GLN C 71 ? SER C 79 ? GLN A 86 SER A 94 AB1 4 LEU C 61 ? ASP C 66 ? LEU A 76 ASP A 81 AB1 5 GLU C 55 ? LYS C 56 ? GLU A 65 LYS A 66 AB2 1 ALA C 9 ? GLN C 13 ? ALA A 10 GLN A 14 AB2 2 THR C 102 ? THR C 107 ? THR A 117 THR A 122 AB2 3 ALA C 85 ? GLY C 92 ? ALA A 100 GLY A 107 AB2 4 TYR C 31 ? GLN C 37 ? TYR A 38 GLN A 44 AB2 5 VAL C 44 ? ARG C 50 ? VAL A 51 ARG A 57 AB3 1 ALA C 9 ? GLN C 13 ? ALA A 10 GLN A 14 AB3 2 THR C 102 ? THR C 107 ? THR A 117 THR A 122 AB3 3 ALA C 85 ? GLY C 92 ? ALA A 100 GLY A 107 AB3 4 LEU C 96 ? PHE C 98 ? LEU A 111 PHE A 113 AB4 1 ALA C 116 ? LEU C 120 ? ALA A 131 LEU A 135 AB4 2 VAL C 130 ? THR C 134 ? VAL A 145 THR A 149 AB4 3 SER C 167 ? SER C 174 ? SER A 182 SER A 189 AB4 4 VAL C 150 ? ILE C 152 ? VAL A 165 ILE A 167 AB5 1 ALA C 116 ? LEU C 120 ? ALA A 131 LEU A 135 AB5 2 VAL C 130 ? THR C 134 ? VAL A 145 THR A 149 AB5 3 SER C 167 ? SER C 174 ? SER A 182 SER A 189 AB5 4 CYS C 156 ? LEU C 158 ? CYS A 171 LEU A 173 AB6 1 LYS D 6 ? SER D 11 ? LYS D 16 SER D 21 AB6 2 ASN D 21 ? PHE D 30 ? ASN D 31 PHE D 40 AB6 3 PHE D 62 ? PHE D 70 ? PHE D 72 PHE D 80 AB6 4 GLU D 50 ? HIS D 51 ? GLU D 60 HIS D 61 AB7 1 LYS D 6 ? SER D 11 ? LYS D 16 SER D 21 AB7 2 ASN D 21 ? PHE D 30 ? ASN D 31 PHE D 40 AB7 3 PHE D 62 ? PHE D 70 ? PHE D 72 PHE D 80 AB7 4 SER D 55 ? PHE D 56 ? SER D 65 PHE D 66 AB8 1 GLU D 36 ? LYS D 41 ? GLU D 46 LYS D 51 AB8 2 TYR D 78 ? ASN D 83 ? TYR D 88 ASN D 93 AB8 3 LYS D 91 ? LYS D 94 ? LYS D 101 LYS D 104 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O HIS A 33 ? O HIS C 38 N GLY A 25 ? N GLY C 30 AA1 2 3 O SER A 24 ? O SER C 29 N ILE A 8 ? N ILE C 13 AA1 3 4 N VAL A 3 ? N VAL C 8 O LEU A 99 ? O LEU C 104 AA1 4 5 N GLY A 96 ? N GLY C 101 O PHE A 108 ? O PHE C 113 AA1 5 6 N VAL A 111 ? N VAL C 116 O LEU A 119 ? O LEU C 124 AA1 6 7 N SER A 120 ? N SER C 125 O VAL A 127 ? O VAL C 132 AA2 1 2 N GLU A 184 ? N GLU C 189 O SER A 205 ? O SER C 210 AA2 2 3 N CYS A 202 ? N CYS C 207 O VAL A 243 ? O VAL C 248 AA2 3 4 O ILE A 244 ? O ILE C 249 N LYS A 227 ? N LYS C 232 AA3 1 2 N GLU A 184 ? N GLU C 189 O SER A 205 ? O SER C 210 AA3 2 3 N CYS A 202 ? N CYS C 207 O VAL A 243 ? O VAL C 248 AA3 3 4 O TYR A 240 ? O TYR C 245 N LEU A 232 ? N LEU C 237 AA4 1 2 N THR A 215 ? N THR C 220 O ARG A 258 ? O ARG C 263 AA4 2 3 N CYS A 257 ? N CYS C 262 O LEU A 271 ? O LEU C 276 AA5 1 2 N SER B 5 ? N SER B 5 O ASP B 24 ? O ASP B 24 AA5 2 3 N PHE B 21 ? N PHE B 21 O LEU B 77 ? O LEU B 89 AA5 3 4 O THR B 76 ? O THR B 88 N GLU B 68 ? N GLU B 79 AA6 1 2 N THR B 13 ? N THR B 13 O VAL B 119 ? O VAL B 131 AA6 2 3 O THR B 114 ? O THR B 126 N TYR B 90 ? N TYR B 102 AA6 3 4 O MET B 89 ? O MET B 101 N GLN B 37 ? N GLN B 44 AA6 4 5 N ARG B 36 ? N ARG B 43 O GLU B 44 ? O GLU B 51 AA6 5 6 N TYR B 48 ? N TYR B 55 O GLU B 56 ? O GLU B 67 AA7 1 2 N GLU B 129 ? N GLU B 141 O THR B 153 ? O THR B 165 AA7 2 3 N ALA B 146 ? N ALA B 158 O VAL B 201 ? O VAL B 213 AA7 3 4 O ARG B 198 ? O ARG B 210 N CYS B 176 ? N CYS B 188 AA8 1 2 N GLU B 129 ? N GLU B 141 O THR B 153 ? O THR B 165 AA8 2 3 N ALA B 146 ? N ALA B 158 O VAL B 201 ? O VAL B 213 AA8 3 4 O ALA B 194 ? O ALA B 206 N LEU B 182 ? N LEU B 194 AA9 1 2 O VAL B 171 ? O VAL B 183 N TRP B 164 ? N TRP B 176 AA9 2 3 N SER B 163 ? N SER B 175 O GLN B 216 ? O GLN B 228 AA9 3 4 N PHE B 219 ? N PHE B 231 O GLN B 238 ? O GLN B 250 AB1 1 2 N GLN C 5 ? N GLN A 6 O ASN C 23 ? O ASN A 24 AB1 2 3 N CYS C 22 ? N CYS A 23 O SER C 72 ? O SER A 87 AB1 3 4 O GLN C 71 ? O GLN A 86 N ASP C 66 ? N ASP A 81 AB1 4 5 O VAL C 63 ? O VAL A 78 N LYS C 56 ? N LYS A 66 AB2 1 2 N LEU C 10 ? N LEU A 11 O VAL C 105 ? O VAL A 120 AB2 2 3 O THR C 102 ? O THR A 117 N TYR C 87 ? N TYR A 102 AB2 3 4 O ALA C 90 ? O ALA A 105 N GLN C 33 ? N GLN A 40 AB2 4 5 N ARG C 36 ? N ARG A 43 O VAL C 44 ? O VAL A 51 AB3 1 2 N LEU C 10 ? N LEU A 11 O VAL C 105 ? O VAL A 120 AB3 2 3 O THR C 102 ? O THR A 117 N TYR C 87 ? N TYR A 102 AB3 3 4 N LEU C 91 ? N LEU A 106 O GLN C 97 ? O GLN A 112 AB4 1 2 N LEU C 120 ? N LEU A 135 O VAL C 130 ? O VAL A 145 AB4 2 3 N PHE C 133 ? N PHE A 148 O ALA C 170 ? O ALA A 185 AB4 3 4 O TRP C 173 ? O TRP A 188 N TYR C 151 ? N TYR A 166 AB5 1 2 N LEU C 120 ? N LEU A 135 O VAL C 130 ? O VAL A 145 AB5 2 3 N PHE C 133 ? N PHE A 148 O ALA C 170 ? O ALA A 185 AB5 3 4 O SER C 167 ? O SER A 182 N LEU C 158 ? N LEU A 173 AB6 1 2 N GLN D 8 ? N GLN D 18 O TYR D 26 ? O TYR D 36 AB6 2 3 N LEU D 23 ? N LEU D 33 O THR D 68 ? O THR D 78 AB6 3 4 O TYR D 67 ? O TYR D 77 N GLU D 50 ? N GLU D 60 AB7 1 2 N GLN D 8 ? N GLN D 18 O TYR D 26 ? O TYR D 36 AB7 2 3 N LEU D 23 ? N LEU D 33 O THR D 68 ? O THR D 78 AB7 3 4 O TYR D 63 ? O TYR D 73 N SER D 55 ? N SER D 65 AB8 1 2 N ASP D 38 ? N ASP D 48 O ARG D 81 ? O ARG D 91 AB8 2 3 N VAL D 82 ? N VAL D 92 O LYS D 91 ? O LYS D 101 # _pdbx_entry_details.entry_id 26JD _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TRP C 40 ? ? -160.61 118.54 2 1 LYS C 91 ? ? -95.92 57.39 3 1 LEU C 104 ? ? -102.75 76.79 4 1 THR C 129 ? ? 51.81 14.47 5 1 PRO C 214 ? ? -76.86 -167.70 6 1 VAL C 219 ? ? 53.05 76.31 7 1 ALA C 240 ? ? 70.72 -1.80 8 1 PRO B 25 ? ? -69.79 -177.41 9 1 LEU B 46 ? ? 51.10 -130.16 10 1 GLU B 63 ? ? 56.04 12.20 11 1 SER B 73 ? ? 56.70 -155.77 12 1 ARG B 75 ? ? 49.47 15.77 13 1 PHE B 86 ? ? 61.05 70.12 14 1 VAL B 110 ? ? 35.42 -87.86 15 1 VAL B 110 ? ? 35.42 -88.22 16 1 PHE B 225 ? ? -108.07 41.56 17 1 THR A 26 ? ? -95.25 -63.51 18 1 GLU A 74 ? ? 50.83 -141.26 19 1 ASP A 137 ? ? -170.94 -171.94 20 1 MET A 178 ? ? 52.62 -136.62 21 1 PHE A 180 ? ? 33.83 55.58 22 1 PRO D 24 ? ? -59.17 174.05 23 1 ASN D 52 ? ? 60.21 60.31 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 HIS _pdbx_validate_peptide_omega.auth_asym_id_1 D _pdbx_validate_peptide_omega.auth_seq_id_1 41 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 PRO _pdbx_validate_peptide_omega.auth_asym_id_2 D _pdbx_validate_peptide_omega.auth_seq_id_2 42 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega 129.80 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id ARG _pdbx_validate_planes.auth_asym_id B _pdbx_validate_planes.auth_seq_id 70 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.086 _pdbx_validate_planes.type 'SIDE CHAIN' # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 26JD _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol 'RIGID BODY FIT' # loop_ _em_3d_fitting_list.id _em_3d_fitting_list.3d_fitting_id _em_3d_fitting_list.pdb_entry_id _em_3d_fitting_list.pdb_chain_id _em_3d_fitting_list.pdb_chain_residue_range _em_3d_fitting_list.details _em_3d_fitting_list.chain_id _em_3d_fitting_list.chain_residue_range _em_3d_fitting_list.source_name _em_3d_fitting_list.type _em_3d_fitting_list.accession_code _em_3d_fitting_list.initial_refinement_model_id 1 1 . . . ? A ? SwissModel 'in silico model' ? ? 2 1 . . . ? B ? SwissModel 'in silico model' ? ? 3 1 6C15 C ? ? C ? PDB 'experimental model' 6C15 2 4 1 6C15 D ? ? D ? PDB 'experimental model' 6C15 2 # _em_3d_reconstruction.entry_id 26JD _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 2.90 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 130855 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.4 # loop_ _em_entity_assembly.id _em_entity_assembly.parent_id _em_entity_assembly.source _em_entity_assembly.type _em_entity_assembly.name _em_entity_assembly.details _em_entity_assembly.synonym _em_entity_assembly.oligomeric_details _em_entity_assembly.entity_id_list 1 0 RECOMBINANT COMPLEX 'Ternary complex of CD1c presenting mycobacterial phosphomycoketide lipid to the MPM7 alpha-beta T cell receptor' ? ? ? '1, 2, 3, 4' 2 1 RECOMBINANT COMPLEX 'CD1c and beta-2-microglobulin heterodimer' 'CD1c presenting the mycobacterial phosphomycoketide (PM) lipid in its pocket' ? ? '1, 4' 3 1 RECOMBINANT COMPLEX 'MPM7 alpha-beta T cell receptor' 'A TRBV7-9 TCR recognising CD1c-PM' ? ? '2, 3' # _em_imaging.entry_id 26JD _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model 'FEI TITAN KRIOS AUTOGRID HOLDER' _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode OTHER _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs 2.7 _em_imaging.nominal_defocus_min 500 _em_imaging.nominal_defocus_max 1500 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen NITROGEN _em_imaging.objective_aperture ? _em_imaging.microscope_serial_number ? _em_imaging.microscope_version ? # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material COPPER _em_sample_support.grid_mesh_size 200 _em_sample_support.grid_type 'Quantifoil R1.2/1.3' _em_sample_support.details '30 mA' _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_vitrification.entry_id 26JD _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity 100 _em_vitrification.temp ? _em_vitrification.chamber_temperature 277 _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 26JD _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 C GLU 6 ? A GLU 1 2 1 Y 1 C GLY 107 ? A GLY 102 3 1 Y 1 C LYS 108 ? A LYS 103 4 1 Y 1 C SER 197 ? A SER 192 5 1 Y 1 C LEU 198 ? A LEU 193 6 1 Y 1 C GLY 199 ? A GLY 194 7 1 Y 1 C SER 200 ? A SER 195 8 1 Y 1 C GLY 201 ? A GLY 196 9 1 Y 1 C GLN 202 ? A GLN 197 10 1 Y 1 C ASN 224 ? A ASN 219 11 1 Y 1 C GLU 225 ? A GLU 220 12 1 Y 1 C GLN 226 ? A GLN 221 13 1 Y 1 C GLU 227 ? A GLU 222 14 1 Y 1 C GLN 228 ? A GLN 223 15 1 Y 1 C LEU 229 ? A LEU 224 16 1 Y 1 C GLY 230 ? A GLY 225 17 1 Y 1 C VAL 252 ? A VAL 247 18 1 Y 1 C ALA 253 ? A ALA 248 19 1 Y 1 C SER 254 ? A SER 249 20 1 Y 1 C GLU 255 ? A GLU 250 21 1 Y 1 C GLU 256 ? A GLU 251 22 1 Y 1 C PRO 257 ? A PRO 252 23 1 Y 1 C ALA 258 ? A ALA 253 24 1 Y 1 C GLY 259 ? A GLY 254 25 1 Y 1 C GLY 271 ? A GLY 266 26 1 Y 1 C GLN 272 ? A GLN 267 27 1 Y 1 C GLY 279 ? A GLY 274 28 1 Y 1 C SER 280 ? A SER 275 29 1 Y 1 B ASP 1 ? B ASP 1 30 1 Y 1 B THR 2 ? B THR 2 31 1 Y 1 B ALA 260 ? B ALA 248 32 1 Y 1 B ASP 261 ? B ASP 249 33 1 Y 1 A GLN 2 ? C GLN 1 34 1 Y 1 A LYS 3 ? C LYS 2 35 1 Y 1 A LYS 139 ? C LYS 124 36 1 Y 1 A GLN 154 ? C GLN 139 37 1 Y 1 A GLN 159 ? C GLN 144 38 1 Y 1 A SER 160 ? C SER 145 39 1 Y 1 A LYS 161 ? C LYS 146 40 1 Y 1 A ASP 162 ? C ASP 147 41 1 Y 1 A SER 163 ? C SER 148 42 1 Y 1 A SER 192 ? C SER 177 43 1 Y 1 A ASP 193 ? C ASP 178 44 1 Y 1 A PHE 194 ? C PHE 179 45 1 Y 1 A ALA 195 ? C ALA 180 46 1 Y 1 A ASN 201 ? C ASN 186 47 1 Y 1 A ASN 202 ? C ASN 187 48 1 Y 1 A SER 203 ? C SER 188 49 1 Y 1 A ILE 204 ? C ILE 189 50 1 Y 1 A ILE 205 ? C ILE 190 51 1 Y 1 A PRO 206 ? C PRO 191 52 1 Y 1 A GLU 207 ? C GLU 192 53 1 Y 1 A ASP 208 ? C ASP 193 54 1 Y 1 A THR 209 ? C THR 194 55 1 Y 1 A PHE 210 ? C PHE 195 56 1 Y 1 A PHE 211 ? C PHE 196 57 1 Y 1 A PRO 212 ? C PRO 197 58 1 Y 1 A SER 213 ? C SER 198 59 1 Y 1 A PRO 214 ? C PRO 199 60 1 Y 1 A GLU 215 ? C GLU 200 61 1 Y 1 A SER 216 ? C SER 201 62 1 Y 1 A SER 217 ? C SER 202 63 1 Y 1 D LYS 85 ? D LYS 75 64 1 Y 1 D ASP 108 ? D ASP 98 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 18C O19 O N N 1 18C C19 C N N 2 18C N2 N N N 3 18C C2 C N S 4 18C C1 C N N 5 18C O1 O N N 6 18C C3 C N R 7 18C C4 C N N 8 18C C5 C N N 9 18C C6 C N N 10 18C C7 C N N 11 18C C8 C N N 12 18C C9 C N N 13 18C C10 C N N 14 18C C11 C N N 15 18C C12 C N N 16 18C C13 C N N 17 18C C14 C N N 18 18C C15 C N N 19 18C C16 C N N 20 18C C17 C N N 21 18C C18 C N N 22 18C O3 O N N 23 18C C20 C N N 24 18C C21 C N N 25 18C C22 C N N 26 18C C23 C N N 27 18C C24 C N N 28 18C C25 C N N 29 18C C26 C N N 30 18C C27 C N N 31 18C C28 C N N 32 18C C29 C N N 33 18C C30 C N N 34 18C C31 C N N 35 18C C32 C N N 36 18C C33 C N N 37 18C C34 C N N 38 18C C35 C N N 39 18C C36 C N N 40 18C H361 H N N 41 18C H362 H N N 42 18C H363 H N N 43 18C H351 H N N 44 18C H352 H N N 45 18C H341 H N N 46 18C H342 H N N 47 18C H331 H N N 48 18C H332 H N N 49 18C H321 H N N 50 18C H322 H N N 51 18C H311 H N N 52 18C H312 H N N 53 18C H301 H N N 54 18C H302 H N N 55 18C H291 H N N 56 18C H292 H N N 57 18C H281 H N N 58 18C H282 H N N 59 18C H271 H N N 60 18C H272 H N N 61 18C H261 H N N 62 18C H262 H N N 63 18C H251 H N N 64 18C H252 H N N 65 18C H241 H N N 66 18C H242 H N N 67 18C H231 H N N 68 18C H232 H N N 69 18C H221 H N N 70 18C H222 H N N 71 18C H211 H N N 72 18C H212 H N N 73 18C H201 H N N 74 18C H202 H N N 75 18C HN2 H N N 76 18C H2 H N N 77 18C H11 H N N 78 18C H12 H N N 79 18C HO1 H N N 80 18C H3 H N N 81 18C HO3 H N N 82 18C H4 H N N 83 18C H5 H N N 84 18C H61 H N N 85 18C H62 H N N 86 18C H71 H N N 87 18C H72 H N N 88 18C H81 H N N 89 18C H82 H N N 90 18C H91 H N N 91 18C H92 H N N 92 18C H101 H N N 93 18C H102 H N N 94 18C H111 H N N 95 18C H112 H N N 96 18C H121 H N N 97 18C H122 H N N 98 18C H131 H N N 99 18C H132 H N N 100 18C H141 H N N 101 18C H142 H N N 102 18C H151 H N N 103 18C H152 H N N 104 18C H161 H N N 105 18C H162 H N N 106 18C H171 H N N 107 18C H172 H N N 108 18C H181 H N N 109 18C H182 H N N 110 18C H183 H N N 111 ALA N N N N 112 ALA CA C N S 113 ALA C C N N 114 ALA O O N N 115 ALA CB C N N 116 ALA OXT O N N 117 ALA H H N N 118 ALA H2 H N N 119 ALA HA H N N 120 ALA HB1 H N N 121 ALA HB2 H N N 122 ALA HB3 H N N 123 ALA HXT H N N 124 ARG N N N N 125 ARG CA C N S 126 ARG C C N N 127 ARG O O N N 128 ARG CB C N N 129 ARG CG C N N 130 ARG CD C N N 131 ARG NE N N N 132 ARG CZ C N N 133 ARG NH1 N N N 134 ARG NH2 N N N 135 ARG OXT O N N 136 ARG H H N N 137 ARG H2 H N N 138 ARG HA H N N 139 ARG HB2 H N N 140 ARG HB3 H N N 141 ARG HG2 H N N 142 ARG HG3 H N N 143 ARG HD2 H N N 144 ARG HD3 H N N 145 ARG HE H N N 146 ARG HH11 H N N 147 ARG HH12 H N N 148 ARG HH21 H N N 149 ARG HH22 H N N 150 ARG HXT H N N 151 ASN N N N N 152 ASN CA C N S 153 ASN C C N N 154 ASN O O N N 155 ASN CB C N N 156 ASN CG C N N 157 ASN OD1 O N N 158 ASN ND2 N N N 159 ASN OXT O N N 160 ASN H H N N 161 ASN H2 H N N 162 ASN HA H N N 163 ASN HB2 H N N 164 ASN HB3 H N N 165 ASN HD21 H N N 166 ASN HD22 H N N 167 ASN HXT H N N 168 ASP N N N N 169 ASP CA C N S 170 ASP C C N N 171 ASP O O N N 172 ASP CB C N N 173 ASP CG C N N 174 ASP OD1 O N N 175 ASP OD2 O N N 176 ASP OXT O N N 177 ASP H H N N 178 ASP H2 H N N 179 ASP HA H N N 180 ASP HB2 H N N 181 ASP HB3 H N N 182 ASP HD2 H N N 183 ASP HXT H N N 184 CYS N N N N 185 CYS CA C N R 186 CYS C C N N 187 CYS O O N N 188 CYS CB C N N 189 CYS SG S N N 190 CYS OXT O N N 191 CYS H H N N 192 CYS H2 H N N 193 CYS HA H N N 194 CYS HB2 H N N 195 CYS HB3 H N N 196 CYS HG H N N 197 CYS HXT H N N 198 GLN N N N N 199 GLN CA C N S 200 GLN C C N N 201 GLN O O N N 202 GLN CB C N N 203 GLN CG C N N 204 GLN CD C N N 205 GLN OE1 O N N 206 GLN NE2 N N N 207 GLN OXT O N N 208 GLN H H N N 209 GLN H2 H N N 210 GLN HA H N N 211 GLN HB2 H N N 212 GLN HB3 H N N 213 GLN HG2 H N N 214 GLN HG3 H N N 215 GLN HE21 H N N 216 GLN HE22 H N N 217 GLN HXT H N N 218 GLU N N N N 219 GLU CA C N S 220 GLU C C N N 221 GLU O O N N 222 GLU CB C N N 223 GLU CG C N N 224 GLU CD C N N 225 GLU OE1 O N N 226 GLU OE2 O N N 227 GLU OXT O N N 228 GLU H H N N 229 GLU H2 H N N 230 GLU HA H N N 231 GLU HB2 H N N 232 GLU HB3 H N N 233 GLU HG2 H N N 234 GLU HG3 H N N 235 GLU HE2 H N N 236 GLU HXT H N N 237 GLY N N N N 238 GLY CA C N N 239 GLY C C N N 240 GLY O O N N 241 GLY OXT O N N 242 GLY H H N N 243 GLY H2 H N N 244 GLY HA2 H N N 245 GLY HA3 H N N 246 GLY HXT H N N 247 HIS N N N N 248 HIS CA C N S 249 HIS C C N N 250 HIS O O N N 251 HIS CB C N N 252 HIS CG C Y N 253 HIS ND1 N Y N 254 HIS CD2 C Y N 255 HIS CE1 C Y N 256 HIS NE2 N Y N 257 HIS OXT O N N 258 HIS H H N N 259 HIS H2 H N N 260 HIS HA H N N 261 HIS HB2 H N N 262 HIS HB3 H N N 263 HIS HD1 H N N 264 HIS HD2 H N N 265 HIS HE1 H N N 266 HIS HE2 H N N 267 HIS HXT H N N 268 ILE N N N N 269 ILE CA C N S 270 ILE C C N N 271 ILE O O N N 272 ILE CB C N S 273 ILE CG1 C N N 274 ILE CG2 C N N 275 ILE CD1 C N N 276 ILE OXT O N N 277 ILE H H N N 278 ILE H2 H N N 279 ILE HA H N N 280 ILE HB H N N 281 ILE HG12 H N N 282 ILE HG13 H N N 283 ILE HG21 H N N 284 ILE HG22 H N N 285 ILE HG23 H N N 286 ILE HD11 H N N 287 ILE HD12 H N N 288 ILE HD13 H N N 289 ILE HXT H N N 290 LEU N N N N 291 LEU CA C N S 292 LEU C C N N 293 LEU O O N N 294 LEU CB C N N 295 LEU CG C N N 296 LEU CD1 C N N 297 LEU CD2 C N N 298 LEU OXT O N N 299 LEU H H N N 300 LEU H2 H N N 301 LEU HA H N N 302 LEU HB2 H N N 303 LEU HB3 H N N 304 LEU HG H N N 305 LEU HD11 H N N 306 LEU HD12 H N N 307 LEU HD13 H N N 308 LEU HD21 H N N 309 LEU HD22 H N N 310 LEU HD23 H N N 311 LEU HXT H N N 312 LYS N N N N 313 LYS CA C N S 314 LYS C C N N 315 LYS O O N N 316 LYS CB C N N 317 LYS CG C N N 318 LYS CD C N N 319 LYS CE C N N 320 LYS NZ N N N 321 LYS OXT O N N 322 LYS H H N N 323 LYS H2 H N N 324 LYS HA H N N 325 LYS HB2 H N N 326 LYS HB3 H N N 327 LYS HG2 H N N 328 LYS HG3 H N N 329 LYS HD2 H N N 330 LYS HD3 H N N 331 LYS HE2 H N N 332 LYS HE3 H N N 333 LYS HZ1 H N N 334 LYS HZ2 H N N 335 LYS HZ3 H N N 336 LYS HXT H N N 337 MET N N N N 338 MET CA C N S 339 MET C C N N 340 MET O O N N 341 MET CB C N N 342 MET CG C N N 343 MET SD S N N 344 MET CE C N N 345 MET OXT O N N 346 MET H H N N 347 MET H2 H N N 348 MET HA H N N 349 MET HB2 H N N 350 MET HB3 H N N 351 MET HG2 H N N 352 MET HG3 H N N 353 MET HE1 H N N 354 MET HE2 H N N 355 MET HE3 H N N 356 MET HXT H N N 357 NAG C1 C N R 358 NAG C2 C N R 359 NAG C3 C N R 360 NAG C4 C N S 361 NAG C5 C N R 362 NAG C6 C N N 363 NAG C7 C N N 364 NAG C8 C N N 365 NAG N2 N N N 366 NAG O1 O N N 367 NAG O3 O N N 368 NAG O4 O N N 369 NAG O5 O N N 370 NAG O6 O N N 371 NAG O7 O N N 372 NAG H1 H N N 373 NAG H2 H N N 374 NAG H3 H N N 375 NAG H4 H N N 376 NAG H5 H N N 377 NAG H61 H N N 378 NAG H62 H N N 379 NAG H81 H N N 380 NAG H82 H N N 381 NAG H83 H N N 382 NAG HN2 H N N 383 NAG HO1 H N N 384 NAG HO3 H N N 385 NAG HO4 H N N 386 NAG HO6 H N N 387 PHE N N N N 388 PHE CA C N S 389 PHE C C N N 390 PHE O O N N 391 PHE CB C N N 392 PHE CG C Y N 393 PHE CD1 C Y N 394 PHE CD2 C Y N 395 PHE CE1 C Y N 396 PHE CE2 C Y N 397 PHE CZ C Y N 398 PHE OXT O N N 399 PHE H H N N 400 PHE H2 H N N 401 PHE HA H N N 402 PHE HB2 H N N 403 PHE HB3 H N N 404 PHE HD1 H N N 405 PHE HD2 H N N 406 PHE HE1 H N N 407 PHE HE2 H N N 408 PHE HZ H N N 409 PHE HXT H N N 410 PRO N N N N 411 PRO CA C N S 412 PRO C C N N 413 PRO O O N N 414 PRO CB C N N 415 PRO CG C N N 416 PRO CD C N N 417 PRO OXT O N N 418 PRO H H N N 419 PRO HA H N N 420 PRO HB2 H N N 421 PRO HB3 H N N 422 PRO HG2 H N N 423 PRO HG3 H N N 424 PRO HD2 H N N 425 PRO HD3 H N N 426 PRO HXT H N N 427 SER N N N N 428 SER CA C N S 429 SER C C N N 430 SER O O N N 431 SER CB C N N 432 SER OG O N N 433 SER OXT O N N 434 SER H H N N 435 SER H2 H N N 436 SER HA H N N 437 SER HB2 H N N 438 SER HB3 H N N 439 SER HG H N N 440 SER HXT H N N 441 THR N N N N 442 THR CA C N S 443 THR C C N N 444 THR O O N N 445 THR CB C N R 446 THR OG1 O N N 447 THR CG2 C N N 448 THR OXT O N N 449 THR H H N N 450 THR H2 H N N 451 THR HA H N N 452 THR HB H N N 453 THR HG1 H N N 454 THR HG21 H N N 455 THR HG22 H N N 456 THR HG23 H N N 457 THR HXT H N N 458 TRP N N N N 459 TRP CA C N S 460 TRP C C N N 461 TRP O O N N 462 TRP CB C N N 463 TRP CG C Y N 464 TRP CD1 C Y N 465 TRP CD2 C Y N 466 TRP NE1 N Y N 467 TRP CE2 C Y N 468 TRP CE3 C Y N 469 TRP CZ2 C Y N 470 TRP CZ3 C Y N 471 TRP CH2 C Y N 472 TRP OXT O N N 473 TRP H H N N 474 TRP H2 H N N 475 TRP HA H N N 476 TRP HB2 H N N 477 TRP HB3 H N N 478 TRP HD1 H N N 479 TRP HE1 H N N 480 TRP HE3 H N N 481 TRP HZ2 H N N 482 TRP HZ3 H N N 483 TRP HH2 H N N 484 TRP HXT H N N 485 TYR N N N N 486 TYR CA C N S 487 TYR C C N N 488 TYR O O N N 489 TYR CB C N N 490 TYR CG C Y N 491 TYR CD1 C Y N 492 TYR CD2 C Y N 493 TYR CE1 C Y N 494 TYR CE2 C Y N 495 TYR CZ C Y N 496 TYR OH O N N 497 TYR OXT O N N 498 TYR H H N N 499 TYR H2 H N N 500 TYR HA H N N 501 TYR HB2 H N N 502 TYR HB3 H N N 503 TYR HD1 H N N 504 TYR HD2 H N N 505 TYR HE1 H N N 506 TYR HE2 H N N 507 TYR HH H N N 508 TYR HXT H N N 509 VAL N N N N 510 VAL CA C N S 511 VAL C C N N 512 VAL O O N N 513 VAL CB C N N 514 VAL CG1 C N N 515 VAL CG2 C N N 516 VAL OXT O N N 517 VAL H H N N 518 VAL H2 H N N 519 VAL HA H N N 520 VAL HB H N N 521 VAL HG11 H N N 522 VAL HG12 H N N 523 VAL HG13 H N N 524 VAL HG21 H N N 525 VAL HG22 H N N 526 VAL HG23 H N N 527 VAL HXT H N N 528 Z7B O1 O N N 529 Z7B C1 C N N 530 Z7B C2 C N N 531 Z7B C3 C N N 532 Z7B C4 C N N 533 Z7B C5 C N N 534 Z7B C6 C N N 535 Z7B O2 O N N 536 Z7B O3 O N N 537 Z7B C7 C N N 538 Z7B C8 C N N 539 Z7B C9 C N N 540 Z7B C10 C N N 541 Z7B C11 C N N 542 Z7B C12 C N N 543 Z7B C13 C N N 544 Z7B C14 C N N 545 Z7B C15 C N N 546 Z7B C16 C N N 547 Z7B C17 C N N 548 Z7B C18 C N N 549 Z7B C19 C N N 550 Z7B C20 C N N 551 Z7B C21 C N N 552 Z7B C22 C N N 553 Z7B C23 C N N 554 Z7B C24 C N N 555 Z7B C25 C N N 556 Z7B C26 C N N 557 Z7B C27 C N N 558 Z7B O4 O N N 559 Z7B C28 C N S 560 Z7B C29 C N S 561 Z7B C30 C N S 562 Z7B C31 C N S 563 Z7B C32 C N S 564 Z7B P1 P N N 565 Z7B H1O H N N 566 Z7B H11 H N N 567 Z7B H12 H N N 568 Z7B H13 H N N 569 Z7B H21 H N N 570 Z7B H22 H N N 571 Z7B H23 H N N 572 Z7B H31 H N N 573 Z7B H32 H N N 574 Z7B H33 H N N 575 Z7B H41 H N N 576 Z7B H42 H N N 577 Z7B H43 H N N 578 Z7B H51 H N N 579 Z7B H52 H N N 580 Z7B H53 H N N 581 Z7B H61 H N N 582 Z7B H62 H N N 583 Z7B H63 H N N 584 Z7B H2O H N N 585 Z7B H71 H N N 586 Z7B H72 H N N 587 Z7B H81 H N N 588 Z7B H82 H N N 589 Z7B H91 H N N 590 Z7B H92 H N N 591 Z7B H101 H N N 592 Z7B H102 H N N 593 Z7B H111 H N N 594 Z7B H112 H N N 595 Z7B H121 H N N 596 Z7B H122 H N N 597 Z7B H131 H N N 598 Z7B H132 H N N 599 Z7B H141 H N N 600 Z7B H142 H N N 601 Z7B H151 H N N 602 Z7B H152 H N N 603 Z7B H161 H N N 604 Z7B H162 H N N 605 Z7B H171 H N N 606 Z7B H172 H N N 607 Z7B H181 H N N 608 Z7B H182 H N N 609 Z7B H191 H N N 610 Z7B H192 H N N 611 Z7B H201 H N N 612 Z7B H202 H N N 613 Z7B H211 H N N 614 Z7B H212 H N N 615 Z7B H221 H N N 616 Z7B H222 H N N 617 Z7B H231 H N N 618 Z7B H232 H N N 619 Z7B H241 H N N 620 Z7B H242 H N N 621 Z7B H251 H N N 622 Z7B H252 H N N 623 Z7B H261 H N N 624 Z7B H262 H N N 625 Z7B H271 H N N 626 Z7B H272 H N N 627 Z7B H281 H N N 628 Z7B H291 H N N 629 Z7B H301 H N N 630 Z7B H311 H N N 631 Z7B H321 H N N 632 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 18C O19 C19 doub N N 1 18C C19 C20 sing N N 2 18C C19 N2 sing N N 3 18C N2 C2 sing N N 4 18C N2 HN2 sing N N 5 18C C2 C1 sing N N 6 18C C2 C3 sing N N 7 18C C2 H2 sing N N 8 18C C1 O1 sing N N 9 18C C1 H11 sing N N 10 18C C1 H12 sing N N 11 18C O1 HO1 sing N N 12 18C C3 O3 sing N N 13 18C C3 C4 sing N N 14 18C C3 H3 sing N N 15 18C C4 C5 doub N E 16 18C C4 H4 sing N N 17 18C C5 C6 sing N N 18 18C C5 H5 sing N N 19 18C C6 C7 sing N N 20 18C C6 H61 sing N N 21 18C C6 H62 sing N N 22 18C C7 C8 sing N N 23 18C C7 H71 sing N N 24 18C C7 H72 sing N N 25 18C C8 C9 sing N N 26 18C C8 H81 sing N N 27 18C C8 H82 sing N N 28 18C C9 C10 sing N N 29 18C C9 H91 sing N N 30 18C C9 H92 sing N N 31 18C C10 C11 sing N N 32 18C C10 H101 sing N N 33 18C C10 H102 sing N N 34 18C C11 C12 sing N N 35 18C C11 H111 sing N N 36 18C C11 H112 sing N N 37 18C C12 C13 sing N N 38 18C C12 H121 sing N N 39 18C C12 H122 sing N N 40 18C C13 C14 sing N N 41 18C C13 H131 sing N N 42 18C C13 H132 sing N N 43 18C C14 C15 sing N N 44 18C C14 H141 sing N N 45 18C C14 H142 sing N N 46 18C C15 C16 sing N N 47 18C C15 H151 sing N N 48 18C C15 H152 sing N N 49 18C C16 C17 sing N N 50 18C C16 H161 sing N N 51 18C C16 H162 sing N N 52 18C C17 C18 sing N N 53 18C C17 H171 sing N N 54 18C C17 H172 sing N N 55 18C C18 H181 sing N N 56 18C C18 H182 sing N N 57 18C C18 H183 sing N N 58 18C O3 HO3 sing N N 59 18C C20 C21 sing N N 60 18C C20 H201 sing N N 61 18C C20 H202 sing N N 62 18C C21 C22 sing N N 63 18C C21 H211 sing N N 64 18C C21 H212 sing N N 65 18C C22 C23 sing N N 66 18C C22 H221 sing N N 67 18C C22 H222 sing N N 68 18C C23 C24 sing N N 69 18C C23 H231 sing N N 70 18C C23 H232 sing N N 71 18C C24 C25 sing N N 72 18C C24 H241 sing N N 73 18C C24 H242 sing N N 74 18C C25 C26 sing N N 75 18C C25 H251 sing N N 76 18C C25 H252 sing N N 77 18C C26 C27 sing N N 78 18C C26 H261 sing N N 79 18C C26 H262 sing N N 80 18C C27 C28 sing N N 81 18C C27 H271 sing N N 82 18C C27 H272 sing N N 83 18C C28 C29 sing N N 84 18C C28 H281 sing N N 85 18C C28 H282 sing N N 86 18C C29 C30 sing N N 87 18C C29 H291 sing N N 88 18C C29 H292 sing N N 89 18C C30 C31 sing N N 90 18C C30 H301 sing N N 91 18C C30 H302 sing N N 92 18C C31 C32 sing N N 93 18C C31 H311 sing N N 94 18C C31 H312 sing N N 95 18C C32 C33 sing N N 96 18C C32 H321 sing N N 97 18C C32 H322 sing N N 98 18C C33 C34 sing N N 99 18C C33 H331 sing N N 100 18C C33 H332 sing N N 101 18C C34 C35 sing N N 102 18C C34 H341 sing N N 103 18C C34 H342 sing N N 104 18C C35 C36 sing N N 105 18C C35 H351 sing N N 106 18C C35 H352 sing N N 107 18C C36 H361 sing N N 108 18C C36 H362 sing N N 109 18C C36 H363 sing N N 110 ALA N CA sing N N 111 ALA N H sing N N 112 ALA N H2 sing N N 113 ALA CA C sing N N 114 ALA CA CB sing N N 115 ALA CA HA sing N N 116 ALA C O doub N N 117 ALA C OXT sing N N 118 ALA CB HB1 sing N N 119 ALA CB HB2 sing N N 120 ALA CB HB3 sing N N 121 ALA OXT HXT sing N N 122 ARG N CA sing N N 123 ARG N H sing N N 124 ARG N H2 sing N N 125 ARG CA C sing N N 126 ARG CA CB sing N N 127 ARG CA HA sing N N 128 ARG C O doub N N 129 ARG C OXT sing N N 130 ARG CB CG sing N N 131 ARG CB HB2 sing N N 132 ARG CB HB3 sing N N 133 ARG CG CD sing N N 134 ARG CG HG2 sing N N 135 ARG CG HG3 sing N N 136 ARG CD NE sing N N 137 ARG CD HD2 sing N N 138 ARG CD HD3 sing N N 139 ARG NE CZ sing N N 140 ARG NE HE sing N N 141 ARG CZ NH1 sing N N 142 ARG CZ NH2 doub N N 143 ARG NH1 HH11 sing N N 144 ARG NH1 HH12 sing N N 145 ARG NH2 HH21 sing N N 146 ARG NH2 HH22 sing N N 147 ARG OXT HXT sing N N 148 ASN N CA sing N N 149 ASN N H sing N N 150 ASN N H2 sing N N 151 ASN CA C sing N N 152 ASN CA CB sing N N 153 ASN CA HA sing N N 154 ASN C O doub N N 155 ASN C OXT sing N N 156 ASN CB CG sing N N 157 ASN CB HB2 sing N N 158 ASN CB HB3 sing N N 159 ASN CG OD1 doub N N 160 ASN CG ND2 sing N N 161 ASN ND2 HD21 sing N N 162 ASN ND2 HD22 sing N N 163 ASN OXT HXT sing N N 164 ASP N CA sing N N 165 ASP N H sing N N 166 ASP N H2 sing N N 167 ASP CA C sing N N 168 ASP CA CB sing N N 169 ASP CA HA sing N N 170 ASP C O doub N N 171 ASP C OXT sing N N 172 ASP CB CG sing N N 173 ASP CB HB2 sing N N 174 ASP CB HB3 sing N N 175 ASP CG OD1 doub N N 176 ASP CG OD2 sing N N 177 ASP OD2 HD2 sing N N 178 ASP OXT HXT sing N N 179 CYS N CA sing N N 180 CYS N H sing N N 181 CYS N H2 sing N N 182 CYS CA C sing N N 183 CYS CA CB sing N N 184 CYS CA HA sing N N 185 CYS C O doub N N 186 CYS C OXT sing N N 187 CYS CB SG sing N N 188 CYS CB HB2 sing N N 189 CYS CB HB3 sing N N 190 CYS SG HG sing N N 191 CYS OXT HXT sing N N 192 GLN N CA sing N N 193 GLN N H sing N N 194 GLN N H2 sing N N 195 GLN CA C sing N N 196 GLN CA CB sing N N 197 GLN CA HA sing N N 198 GLN C O doub N N 199 GLN C OXT sing N N 200 GLN CB CG sing N N 201 GLN CB HB2 sing N N 202 GLN CB HB3 sing N N 203 GLN CG CD sing N N 204 GLN CG HG2 sing N N 205 GLN CG HG3 sing N N 206 GLN CD OE1 doub N N 207 GLN CD NE2 sing N N 208 GLN NE2 HE21 sing N N 209 GLN NE2 HE22 sing N N 210 GLN OXT HXT sing N N 211 GLU N CA sing N N 212 GLU N H sing N N 213 GLU N H2 sing N N 214 GLU CA C sing N N 215 GLU CA CB sing N N 216 GLU CA HA sing N N 217 GLU C O doub N N 218 GLU C OXT sing N N 219 GLU CB CG sing N N 220 GLU CB HB2 sing N N 221 GLU CB HB3 sing N N 222 GLU CG CD sing N N 223 GLU CG HG2 sing N N 224 GLU CG HG3 sing N N 225 GLU CD OE1 doub N N 226 GLU CD OE2 sing N N 227 GLU OE2 HE2 sing N N 228 GLU OXT HXT sing N N 229 GLY N CA sing N N 230 GLY N H sing N N 231 GLY N H2 sing N N 232 GLY CA C sing N N 233 GLY CA HA2 sing N N 234 GLY CA HA3 sing N N 235 GLY C O doub N N 236 GLY C OXT sing N N 237 GLY OXT HXT sing N N 238 HIS N CA sing N N 239 HIS N H sing N N 240 HIS N H2 sing N N 241 HIS CA C sing N N 242 HIS CA CB sing N N 243 HIS CA HA sing N N 244 HIS C O doub N N 245 HIS C OXT sing N N 246 HIS CB CG sing N N 247 HIS CB HB2 sing N N 248 HIS CB HB3 sing N N 249 HIS CG ND1 sing Y N 250 HIS CG CD2 doub Y N 251 HIS ND1 CE1 doub Y N 252 HIS ND1 HD1 sing N N 253 HIS CD2 NE2 sing Y N 254 HIS CD2 HD2 sing N N 255 HIS CE1 NE2 sing Y N 256 HIS CE1 HE1 sing N N 257 HIS NE2 HE2 sing N N 258 HIS OXT HXT sing N N 259 ILE N CA sing N N 260 ILE N H sing N N 261 ILE N H2 sing N N 262 ILE CA C sing N N 263 ILE CA CB sing N N 264 ILE CA HA sing N N 265 ILE C O doub N N 266 ILE C OXT sing N N 267 ILE CB CG1 sing N N 268 ILE CB CG2 sing N N 269 ILE CB HB sing N N 270 ILE CG1 CD1 sing N N 271 ILE CG1 HG12 sing N N 272 ILE CG1 HG13 sing N N 273 ILE CG2 HG21 sing N N 274 ILE CG2 HG22 sing N N 275 ILE CG2 HG23 sing N N 276 ILE CD1 HD11 sing N N 277 ILE CD1 HD12 sing N N 278 ILE CD1 HD13 sing N N 279 ILE OXT HXT sing N N 280 LEU N CA sing N N 281 LEU N H sing N N 282 LEU N H2 sing N N 283 LEU CA C sing N N 284 LEU CA CB sing N N 285 LEU CA HA sing N N 286 LEU C O doub N N 287 LEU C OXT sing N N 288 LEU CB CG sing N N 289 LEU CB HB2 sing N N 290 LEU CB HB3 sing N N 291 LEU CG CD1 sing N N 292 LEU CG CD2 sing N N 293 LEU CG HG sing N N 294 LEU CD1 HD11 sing N N 295 LEU CD1 HD12 sing N N 296 LEU CD1 HD13 sing N N 297 LEU CD2 HD21 sing N N 298 LEU CD2 HD22 sing N N 299 LEU CD2 HD23 sing N N 300 LEU OXT HXT sing N N 301 LYS N CA sing N N 302 LYS N H sing N N 303 LYS N H2 sing N N 304 LYS CA C sing N N 305 LYS CA CB sing N N 306 LYS CA HA sing N N 307 LYS C O doub N N 308 LYS C OXT sing N N 309 LYS CB CG sing N N 310 LYS CB HB2 sing N N 311 LYS CB HB3 sing N N 312 LYS CG CD sing N N 313 LYS CG HG2 sing N N 314 LYS CG HG3 sing N N 315 LYS CD CE sing N N 316 LYS CD HD2 sing N N 317 LYS CD HD3 sing N N 318 LYS CE NZ sing N N 319 LYS CE HE2 sing N N 320 LYS CE HE3 sing N N 321 LYS NZ HZ1 sing N N 322 LYS NZ HZ2 sing N N 323 LYS NZ HZ3 sing N N 324 LYS OXT HXT sing N N 325 MET N CA sing N N 326 MET N H sing N N 327 MET N H2 sing N N 328 MET CA C sing N N 329 MET CA CB sing N N 330 MET CA HA sing N N 331 MET C O doub N N 332 MET C OXT sing N N 333 MET CB CG sing N N 334 MET CB HB2 sing N N 335 MET CB HB3 sing N N 336 MET CG SD sing N N 337 MET CG HG2 sing N N 338 MET CG HG3 sing N N 339 MET SD CE sing N N 340 MET CE HE1 sing N N 341 MET CE HE2 sing N N 342 MET CE HE3 sing N N 343 MET OXT HXT sing N N 344 NAG C1 C2 sing N N 345 NAG C1 O1 sing N N 346 NAG C1 O5 sing N N 347 NAG C1 H1 sing N N 348 NAG C2 C3 sing N N 349 NAG C2 N2 sing N N 350 NAG C2 H2 sing N N 351 NAG C3 C4 sing N N 352 NAG C3 O3 sing N N 353 NAG C3 H3 sing N N 354 NAG C4 C5 sing N N 355 NAG C4 O4 sing N N 356 NAG C4 H4 sing N N 357 NAG C5 C6 sing N N 358 NAG C5 O5 sing N N 359 NAG C5 H5 sing N N 360 NAG C6 O6 sing N N 361 NAG C6 H61 sing N N 362 NAG C6 H62 sing N N 363 NAG C7 C8 sing N N 364 NAG C7 N2 sing N N 365 NAG C7 O7 doub N N 366 NAG C8 H81 sing N N 367 NAG C8 H82 sing N N 368 NAG C8 H83 sing N N 369 NAG N2 HN2 sing N N 370 NAG O1 HO1 sing N N 371 NAG O3 HO3 sing N N 372 NAG O4 HO4 sing N N 373 NAG O6 HO6 sing N N 374 PHE N CA sing N N 375 PHE N H sing N N 376 PHE N H2 sing N N 377 PHE CA C sing N N 378 PHE CA CB sing N N 379 PHE CA HA sing N N 380 PHE C O doub N N 381 PHE C OXT sing N N 382 PHE CB CG sing N N 383 PHE CB HB2 sing N N 384 PHE CB HB3 sing N N 385 PHE CG CD1 doub Y N 386 PHE CG CD2 sing Y N 387 PHE CD1 CE1 sing Y N 388 PHE CD1 HD1 sing N N 389 PHE CD2 CE2 doub Y N 390 PHE CD2 HD2 sing N N 391 PHE CE1 CZ doub Y N 392 PHE CE1 HE1 sing N N 393 PHE CE2 CZ sing Y N 394 PHE CE2 HE2 sing N N 395 PHE CZ HZ sing N N 396 PHE OXT HXT sing N N 397 PRO N CA sing N N 398 PRO N CD sing N N 399 PRO N H sing N N 400 PRO CA C sing N N 401 PRO CA CB sing N N 402 PRO CA HA sing N N 403 PRO C O doub N N 404 PRO C OXT sing N N 405 PRO CB CG sing N N 406 PRO CB HB2 sing N N 407 PRO CB HB3 sing N N 408 PRO CG CD sing N N 409 PRO CG HG2 sing N N 410 PRO CG HG3 sing N N 411 PRO CD HD2 sing N N 412 PRO CD HD3 sing N N 413 PRO OXT HXT sing N N 414 SER N CA sing N N 415 SER N H sing N N 416 SER N H2 sing N N 417 SER CA C sing N N 418 SER CA CB sing N N 419 SER CA HA sing N N 420 SER C O doub N N 421 SER C OXT sing N N 422 SER CB OG sing N N 423 SER CB HB2 sing N N 424 SER CB HB3 sing N N 425 SER OG HG sing N N 426 SER OXT HXT sing N N 427 THR N CA sing N N 428 THR N H sing N N 429 THR N H2 sing N N 430 THR CA C sing N N 431 THR CA CB sing N N 432 THR CA HA sing N N 433 THR C O doub N N 434 THR C OXT sing N N 435 THR CB OG1 sing N N 436 THR CB CG2 sing N N 437 THR CB HB sing N N 438 THR OG1 HG1 sing N N 439 THR CG2 HG21 sing N N 440 THR CG2 HG22 sing N N 441 THR CG2 HG23 sing N N 442 THR OXT HXT sing N N 443 TRP N CA sing N N 444 TRP N H sing N N 445 TRP N H2 sing N N 446 TRP CA C sing N N 447 TRP CA CB sing N N 448 TRP CA HA sing N N 449 TRP C O doub N N 450 TRP C OXT sing N N 451 TRP CB CG sing N N 452 TRP CB HB2 sing N N 453 TRP CB HB3 sing N N 454 TRP CG CD1 doub Y N 455 TRP CG CD2 sing Y N 456 TRP CD1 NE1 sing Y N 457 TRP CD1 HD1 sing N N 458 TRP CD2 CE2 doub Y N 459 TRP CD2 CE3 sing Y N 460 TRP NE1 CE2 sing Y N 461 TRP NE1 HE1 sing N N 462 TRP CE2 CZ2 sing Y N 463 TRP CE3 CZ3 doub Y N 464 TRP CE3 HE3 sing N N 465 TRP CZ2 CH2 doub Y N 466 TRP CZ2 HZ2 sing N N 467 TRP CZ3 CH2 sing Y N 468 TRP CZ3 HZ3 sing N N 469 TRP CH2 HH2 sing N N 470 TRP OXT HXT sing N N 471 TYR N CA sing N N 472 TYR N H sing N N 473 TYR N H2 sing N N 474 TYR CA C sing N N 475 TYR CA CB sing N N 476 TYR CA HA sing N N 477 TYR C O doub N N 478 TYR C OXT sing N N 479 TYR CB CG sing N N 480 TYR CB HB2 sing N N 481 TYR CB HB3 sing N N 482 TYR CG CD1 doub Y N 483 TYR CG CD2 sing Y N 484 TYR CD1 CE1 sing Y N 485 TYR CD1 HD1 sing N N 486 TYR CD2 CE2 doub Y N 487 TYR CD2 HD2 sing N N 488 TYR CE1 CZ doub Y N 489 TYR CE1 HE1 sing N N 490 TYR CE2 CZ sing Y N 491 TYR CE2 HE2 sing N N 492 TYR CZ OH sing N N 493 TYR OH HH sing N N 494 TYR OXT HXT sing N N 495 VAL N CA sing N N 496 VAL N H sing N N 497 VAL N H2 sing N N 498 VAL CA C sing N N 499 VAL CA CB sing N N 500 VAL CA HA sing N N 501 VAL C O doub N N 502 VAL C OXT sing N N 503 VAL CB CG1 sing N N 504 VAL CB CG2 sing N N 505 VAL CB HB sing N N 506 VAL CG1 HG11 sing N N 507 VAL CG1 HG12 sing N N 508 VAL CG1 HG13 sing N N 509 VAL CG2 HG21 sing N N 510 VAL CG2 HG22 sing N N 511 VAL CG2 HG23 sing N N 512 VAL OXT HXT sing N N 513 Z7B O1 P1 sing N N 514 Z7B C1 C7 sing N N 515 Z7B C1 H11 sing N N 516 Z7B C1 H12 sing N N 517 Z7B C1 H13 sing N N 518 Z7B C2 C28 sing N N 519 Z7B C2 H21 sing N N 520 Z7B C2 H22 sing N N 521 Z7B C2 H23 sing N N 522 Z7B C3 C29 sing N N 523 Z7B C3 H31 sing N N 524 Z7B C3 H32 sing N N 525 Z7B C3 H33 sing N N 526 Z7B C4 C30 sing N N 527 Z7B C4 H41 sing N N 528 Z7B C4 H42 sing N N 529 Z7B C4 H43 sing N N 530 Z7B C5 C31 sing N N 531 Z7B C5 H51 sing N N 532 Z7B C5 H52 sing N N 533 Z7B C5 H53 sing N N 534 Z7B C6 C32 sing N N 535 Z7B C6 H61 sing N N 536 Z7B C6 H62 sing N N 537 Z7B C6 H63 sing N N 538 Z7B O2 P1 sing N N 539 Z7B O3 P1 doub N N 540 Z7B C7 C8 sing N N 541 Z7B C7 H71 sing N N 542 Z7B C7 H72 sing N N 543 Z7B C8 C9 sing N N 544 Z7B C8 H81 sing N N 545 Z7B C8 H82 sing N N 546 Z7B C9 C10 sing N N 547 Z7B C9 H91 sing N N 548 Z7B C9 H92 sing N N 549 Z7B C10 C11 sing N N 550 Z7B C10 H101 sing N N 551 Z7B C10 H102 sing N N 552 Z7B C11 C18 sing N N 553 Z7B C11 H111 sing N N 554 Z7B C11 H112 sing N N 555 Z7B C12 C17 sing N N 556 Z7B C12 C19 sing N N 557 Z7B C12 H121 sing N N 558 Z7B C12 H122 sing N N 559 Z7B C13 C20 sing N N 560 Z7B C13 C22 sing N N 561 Z7B C13 H131 sing N N 562 Z7B C13 H132 sing N N 563 Z7B C14 C21 sing N N 564 Z7B C14 C23 sing N N 565 Z7B C14 H141 sing N N 566 Z7B C14 H142 sing N N 567 Z7B C15 C24 sing N N 568 Z7B C15 C26 sing N N 569 Z7B C15 H151 sing N N 570 Z7B C15 H152 sing N N 571 Z7B C16 C25 sing N N 572 Z7B C16 C27 sing N N 573 Z7B C16 H161 sing N N 574 Z7B C16 H162 sing N N 575 Z7B C17 O4 sing N N 576 Z7B C17 H171 sing N N 577 Z7B C17 H172 sing N N 578 Z7B C18 C28 sing N N 579 Z7B C18 H181 sing N N 580 Z7B C18 H182 sing N N 581 Z7B C19 C29 sing N N 582 Z7B C19 H191 sing N N 583 Z7B C19 H192 sing N N 584 Z7B C20 C28 sing N N 585 Z7B C20 H201 sing N N 586 Z7B C20 H202 sing N N 587 Z7B C21 C29 sing N N 588 Z7B C21 H211 sing N N 589 Z7B C21 H212 sing N N 590 Z7B C22 C30 sing N N 591 Z7B C22 H221 sing N N 592 Z7B C22 H222 sing N N 593 Z7B C23 C31 sing N N 594 Z7B C23 H231 sing N N 595 Z7B C23 H232 sing N N 596 Z7B C24 C30 sing N N 597 Z7B C24 H241 sing N N 598 Z7B C24 H242 sing N N 599 Z7B C25 C31 sing N N 600 Z7B C25 H251 sing N N 601 Z7B C25 H252 sing N N 602 Z7B C26 C32 sing N N 603 Z7B C26 H261 sing N N 604 Z7B C26 H262 sing N N 605 Z7B C27 C32 sing N N 606 Z7B C27 H271 sing N N 607 Z7B C27 H272 sing N N 608 Z7B O4 P1 sing N N 609 Z7B C28 H281 sing N N 610 Z7B C29 H291 sing N N 611 Z7B C30 H301 sing N N 612 Z7B C31 H311 sing N N 613 Z7B C32 H321 sing N N 614 Z7B O2 H2O sing N N 615 Z7B H1O O1 sing N N 616 # _em_admin.current_status REL _em_admin.deposition_date 2026-05-01 _em_admin.deposition_site PDBJ _em_admin.entry_id 26JD _em_admin.last_update 2026-11-04 _em_admin.map_release_date 2026-11-04 _em_admin.title 'Cryo-EM ternary structure of CD1c presenting a mycobacterial lipid to a T cell receptor' # loop_ _em_buffer_component.buffer_id _em_buffer_component.concentration _em_buffer_component.concentration_units _em_buffer_component.formula _em_buffer_component.id _em_buffer_component.name 1 10 mM HEPES 1 'N-2-hydroxyethylpiperazine-N-2-ethane sulfonic acid' 1 150 mM NaCl 2 'sodium chloride' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag YES _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units MEGADALTONS _em_entity_assembly_molwt.value 0.1 # loop_ _em_entity_assembly_naturalsource.cell _em_entity_assembly_naturalsource.cellular_location _em_entity_assembly_naturalsource.entity_assembly_id _em_entity_assembly_naturalsource.id _em_entity_assembly_naturalsource.ncbi_tax_id _em_entity_assembly_naturalsource.organism _em_entity_assembly_naturalsource.organelle _em_entity_assembly_naturalsource.organ _em_entity_assembly_naturalsource.strain _em_entity_assembly_naturalsource.tissue _em_entity_assembly_naturalsource.details ? ? 2 1 9606 'Homo sapiens' ? ? ? ? ? ? ? 3 2 9606 'Homo sapiens' ? ? ? ? ? # loop_ _em_entity_assembly_recombinant.cell _em_entity_assembly_recombinant.entity_assembly_id _em_entity_assembly_recombinant.id _em_entity_assembly_recombinant.ncbi_tax_id _em_entity_assembly_recombinant.organism _em_entity_assembly_recombinant.plasmid _em_entity_assembly_recombinant.strain ? 2 1 9606 'Homo sapiens' ? ? ? 3 2 562 'Escherichia coli' ? ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 60 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 BIOQUANTUM (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images 10422 # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version _em_software.reference_DOI 'PARTICLE SELECTION' ? 1 1 ? ? cryoSPARC 4 ? 'PARTICLE SELECTION' ? 2 1 ? ? Topaz ? ? 'IMAGE ACQUISITION' ? 3 1 ? 1 ? ? ? MASKING ? 4 1 1 1 ? ? ? 'CTF CORRECTION' ? 5 1 ? ? cryoSPARC 4 ? 'LAYERLINE INDEXING' ? 6 1 1 1 ? ? ? 'DIFFRACTION INDEXING' ? 7 1 1 1 ? ? ? 'MODEL FITTING' 'Dock in map' 8 1 1 ? PHENIX 1.21.2_5419 ? OTHER ? 9 1 1 1 ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? cryoSPARC 4 ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? cryoSPARC 4 ? CLASSIFICATION ? 12 1 ? ? cryoSPARC 4 ? RECONSTRUCTION ? 13 1 ? ? cryoSPARC ? ? 'MODEL REFINEMENT' 'Real-space refinement' 14 ? 1 ? PHENIX 1.21.2_5419 ? 'MODEL REFINEMENT' 'via CCP-EM suite' 15 ? 1 ? Servalcat ? ? # _em_specimen.concentration 2 _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'National Health and Medical Research Council (NHMRC, Australia)' _pdbx_audit_support.country Australia _pdbx_audit_support.grant_number 2027104 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_initial_refinement_model.id _pdbx_initial_refinement_model.type _pdbx_initial_refinement_model.source_name _pdbx_initial_refinement_model.accession_code _pdbx_initial_refinement_model.entity_id_list _pdbx_initial_refinement_model.details 1 'in silico model' SwissModel ? ? ? 2 'experimental model' PDB 6C15 ? ? # _atom_sites.entry_id 26JD _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O P S # loop_ #