HEADER HYDROLASE 06-MAY-26 26LN TITLE CRYSTAL STRUCTURE OF A NEW ISOFORM OF RIBOSOME INACTIVATING PROTEIN TITLE 2 FROM MOMORDICA BALSAMINA AT 1.41 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIBOSOME INACTIVATING PROTEIN; COMPND 3 CHAIN: A SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MOMORDICA BALSAMINA; SOURCE 3 ORGANISM_TAXID: 3672 KEYWDS RIP, RIBOSOME INACTIVATING PROTEIN, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR D.BARIK,N.AHMAD,P.SHARMA,S.SHARMA,T.P.SINGH REVDAT 1 20-MAY-26 26LN 0 JRNL AUTH D.BARIK,N.AHMAD,P.SHARMA,S.SHARMA,T.P.SINGH JRNL TITL CRYSTAL STRUCTURE OF A NEW ISOFORM OF RIBOSOME INACTIVATING JRNL TITL 2 PROTEIN FROM MOMORDICA BALSAMINA AT 1.41 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.41 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0430 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.41 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.64 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 48641 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.068 REMARK 3 FREE R VALUE TEST SET COUNT : 2465 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.41 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.45 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3404 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.00 REMARK 3 BIN R VALUE (WORKING SET) : 0.3310 REMARK 3 BIN FREE R VALUE SET COUNT : 177 REMARK 3 BIN FREE R VALUE : 0.3310 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1920 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 56 REMARK 3 SOLVENT ATOMS : 293 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.92 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.35600 REMARK 3 B22 (A**2) : -0.35600 REMARK 3 B33 (A**2) : 1.15600 REMARK 3 B12 (A**2) : -0.17800 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.064 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.065 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.058 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.541 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.976 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.968 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2055 ; 0.011 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 1967 ; 0.002 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2802 ; 1.894 ; 1.810 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4521 ; 0.667 ; 1.731 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 258 ; 5.867 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 14 ;13.202 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 332 ;13.081 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 334 ; 0.097 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2422 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 480 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 440 ; 0.245 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 50 ; 0.251 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1048 ; 0.182 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 200 ; 0.207 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1008 ; 2.128 ; 2.315 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1007 ; 2.128 ; 2.311 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1265 ; 2.776 ; 4.156 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1266 ; 2.776 ; 4.160 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1047 ; 3.549 ; 2.697 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1048 ; 3.549 ; 2.699 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1534 ; 4.913 ; 4.804 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1535 ; 4.911 ; 4.805 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 26LN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-MAY-26. REMARK 100 THE DEPOSITION ID IS D_1300073729. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-JUL-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID30B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.87313 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AUTOPROC REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 48750 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.408 REMARK 200 RESOLUTION RANGE LOW (A) : 37.644 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 5.200 REMARK 200 R MERGE (I) : 0.03400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.41 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.43 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9 REMARK 200 DATA REDUNDANCY IN SHELL : 5.40 REMARK 200 R MERGE FOR SHELL (I) : 1.28400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 3MRW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.76 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 6000, 0.1M SODIUM PHOSPHATE, PH REMARK 280 6.7, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 65.15150 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 37.61524 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 13.28433 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 65.15150 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 37.61524 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 13.28433 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 65.15150 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 37.61524 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 13.28433 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 75.23047 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 26.56867 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 75.23047 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 26.56867 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 75.23047 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 26.56867 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1580 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11320 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 21.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 610 O HOH A 625 1.81 REMARK 500 O4 NAG B 1 C1 NAG A 301 1.84 REMARK 500 OG1 THR A 243 O HOH A 401 2.05 REMARK 500 O HOH A 528 O HOH A 538 2.06 REMARK 500 OG SER A 42 O HOH A 402 2.06 REMARK 500 O HOH A 686 O HOH A 691 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 122 CB - CA - C ANGL. DEV. = 15.3 DEGREES REMARK 500 ARG A 122 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 ARG A 174 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 32 50.12 39.63 REMARK 500 ASN A 68 -3.88 -144.54 REMARK 500 THR A 77 -107.06 61.33 REMARK 500 PRO A 106 44.18 -86.61 REMARK 500 THR A 158 -82.19 -119.89 REMARK 500 SER A 235 19.85 -149.38 REMARK 500 ASN A 236 -70.97 -136.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 177 0.19 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 NAG A 301 DBREF 26LN A 1 247 PDB 26LN 26LN 1 247 SEQRES 1 A 247 ASP VAL SER PHE ARG LEU SER GLY ALA ASP PRO SER SER SEQRES 2 A 247 TYR GLY GLU PHE ILE LYS ASP LEU ARG ASN ALA LEU PRO SEQRES 3 A 247 PHE ARG GLU LYS VAL TYR ASN ILE PRO LEU LEU LEU PRO SEQRES 4 A 247 SER VAL SER GLY ALA GLY ARG TYR LEU LEU MET HIS LEU SEQRES 5 A 247 PHE ASN TYR ASP GLY ASN THR ILE THR VAL ALA VAL ASP SEQRES 6 A 247 VAL THR ASN VAL TYR ILE MET GLY TYR LEU ALA THR THR SEQRES 7 A 247 THR SER TYR PHE PHE ASN GLU PRO ALA ALA GLU LEU ALA SEQRES 8 A 247 SER GLN TYR VAL PHE ARG ASP ALA ARG ARG LYS ILE THR SEQRES 9 A 247 LEU PRO TYR SER GLY ASN TYR GLU LYS LEU GLN ILE ALA SEQRES 10 A 247 ALA GLY LYS PRO ARG GLU LYS ILE PRO ILE GLY LEU PRO SEQRES 11 A 247 ALA LEU ASP SER ALA ILE SER THR LEU LEU HIS TYR ASP SEQRES 12 A 247 SER THR ALA ALA ALA GLY ALA LEU LEU VAL LEU ILE GLN SEQRES 13 A 247 THR THR ALA GLU ALA ALA ARG PHE SER TYR ILE GLU GLN SEQRES 14 A 247 GLN ILE GLN GLU ARG ALA TYR ARG ASP GLU VAL PRO SER SEQRES 15 A 247 LEU ALA THR ILE SER LEU GLU ASN SER TRP SER GLY LEU SEQRES 16 A 247 SER LYS GLN ILE GLN LEU ALA GLU GLY ASN ASN GLY ILE SEQRES 17 A 247 PHE ARG THR PRO ILE VAL LEU VAL ASP ASN SER GLY ASN SEQRES 18 A 247 ARG VAL GLN ILE THR ASN VAL THR SER GLN THR VAL THR SEQRES 19 A 247 SER ASN ILE GLN LEU LEU LEU ASN THR LYS ASN ILE GLY HET NAG B 1 14 HET FUC B 2 10 HET NAG A 301 14 HET EDO A 302 4 HET EDO A 303 4 HET EDO A 304 4 HET GOL A 305 6 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM EDO 1,2-ETHANEDIOL HETNAM GOL GLYCEROL HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE HETSYN EDO ETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 NAG 2(C8 H15 N O6) FORMUL 2 FUC C6 H12 O5 FORMUL 4 EDO 3(C2 H6 O2) FORMUL 7 GOL C3 H8 O3 FORMUL 8 HOH *293(H2 O) HELIX 1 AA1 ASP A 10 ALA A 24 1 15 HELIX 2 AA2 SER A 42 GLY A 45 5 4 HELIX 3 AA3 GLU A 85 SER A 92 1 8 HELIX 4 AA4 ASN A 110 GLY A 119 1 10 HELIX 5 AA5 PRO A 121 ILE A 125 5 5 HELIX 6 AA6 GLY A 128 LEU A 140 1 13 HELIX 7 AA7 ASP A 143 THR A 158 1 16 HELIX 8 AA8 THR A 158 PHE A 164 1 7 HELIX 9 AA9 PHE A 164 ARG A 174 1 11 HELIX 10 AB1 SER A 182 GLU A 203 1 22 HELIX 11 AB2 SER A 230 ASN A 236 1 7 HELIX 12 AB3 ASN A 242 ILE A 246 5 5 SHEET 1 AA1 6 VAL A 2 ARG A 5 0 SHEET 2 AA1 6 TYR A 47 PHE A 53 1 O HIS A 51 N VAL A 2 SHEET 3 AA1 6 THR A 59 ASP A 65 -1 O VAL A 62 N MET A 50 SHEET 4 AA1 6 ILE A 71 ALA A 76 -1 O MET A 72 N ALA A 63 SHEET 5 AA1 6 THR A 79 PHE A 82 -1 O THR A 79 N ALA A 76 SHEET 6 AA1 6 ARG A 101 THR A 104 1 O ILE A 103 N SER A 80 SHEET 1 AA2 2 PHE A 27 VAL A 31 0 SHEET 2 AA2 2 ILE A 34 LEU A 37 -1 O ILE A 34 N VAL A 31 SHEET 1 AA3 2 ILE A 208 VAL A 216 0 SHEET 2 AA3 2 ARG A 222 ASN A 227 -1 O ILE A 225 N ILE A 213 LINK ND2 ASN A 227 C1 NAG B 1 1555 1555 1.44 LINK O3 NAG B 1 C1 FUC B 2 1555 1555 1.40 CRYST1 130.303 130.303 39.853 90.00 90.00 120.00 H 3 9 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007674 0.004431 0.000000 0.00000 SCALE2 0.000000 0.008862 0.000000 0.00000 SCALE3 0.000000 0.000000 0.025092 0.00000 CONECT 1797 1961 CONECT 1961 1797 1962 1972 CONECT 1962 1961 1963 1969 CONECT 1963 1962 1964 1970 CONECT 1964 1963 1965 1971 CONECT 1965 1964 1966 1972 CONECT 1966 1965 1973 CONECT 1967 1968 1969 1974 CONECT 1968 1967 CONECT 1969 1962 1967 CONECT 1970 1963 1975 CONECT 1971 1964 CONECT 1972 1961 1965 CONECT 1973 1966 CONECT 1974 1967 CONECT 1975 1970 1976 1984 CONECT 1976 1975 1977 1981 CONECT 1977 1976 1978 1982 CONECT 1978 1977 1979 1983 CONECT 1979 1978 1980 1984 CONECT 1980 1979 CONECT 1981 1976 CONECT 1982 1977 CONECT 1983 1978 CONECT 1984 1975 1979 CONECT 1985 1986 1996 CONECT 1986 1985 1987 1993 CONECT 1987 1986 1988 1994 CONECT 1988 1987 1989 1995 CONECT 1989 1988 1990 1996 CONECT 1990 1989 1997 CONECT 1991 1992 1993 1998 CONECT 1992 1991 CONECT 1993 1986 1991 CONECT 1994 1987 CONECT 1995 1988 CONECT 1996 1985 1989 CONECT 1997 1990 CONECT 1998 1991 CONECT 1999 2000 2001 CONECT 2000 1999 CONECT 2001 1999 2002 CONECT 2002 2001 CONECT 2003 2004 2005 CONECT 2004 2003 CONECT 2005 2003 2006 CONECT 2006 2005 CONECT 2007 2008 2009 CONECT 2008 2007 CONECT 2009 2007 2010 CONECT 2010 2009 CONECT 2011 2012 2013 CONECT 2012 2011 CONECT 2013 2011 2014 2015 CONECT 2014 2013 CONECT 2015 2013 2016 CONECT 2016 2015 MASTER 342 0 7 12 10 0 0 6 2269 1 57 19 END