HEADER TRANSFERASE 03-FEB-26 28JB TITLE STRUCTURE OF DARM METHYLTRANSFERASE IN COMPLEX WITH SAH COMPND MOL_ID: 1; COMPND 2 MOLECULE: DARM; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MICROMONOSPORA RUBIDA; SOURCE 3 ORGANISM_TAXID: 2697657; SOURCE 4 VARIANT: JCM 32386; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS O-METHYLTRANSFERSE INVOLVED IN THE BIOSYNTHESIS OF GUANIDINE KEYWDS 2 CONTAINING SESTERTERPENE DARUMYCIN, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR D.KOLLING,J.KOEHNKE REVDAT 1 04-NOV-26 28JB 0 JRNL AUTH D.BRATIICHUK,D.KOLLING,I.REDZIC,M.STIERHOF,F.FRIES,J.ZAPP, JRNL AUTH 2 R.MULLER,M.MYRONOVSKYI,J.KOEHNKE,A.LUZHETSKYY JRNL TITL DISCOVERY AND BIOSYNTHETIC CHARACTERIZATION OF DARUMYCINS JRNL TITL 2 EXPAND THE CHEMICAL SPACE OF SESTERTERPENE ANTIBIOTICS JRNL REF JACS AU V. 6 4944 2026 JRNL REFN ESSN 2691-3704 JRNL DOI 10.1021/JACSAU.6C00499 REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.21.1-5286 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 54.39 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 29730 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.192 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 54.3900 - 4.4000 1.00 2821 123 0.1820 0.1629 REMARK 3 2 4.4000 - 3.4900 1.00 2812 135 0.1574 0.1817 REMARK 3 3 3.4900 - 3.0500 1.00 2795 143 0.1642 0.1677 REMARK 3 4 3.0500 - 2.7700 1.00 2774 142 0.1761 0.2047 REMARK 3 5 2.7700 - 2.5800 1.00 2837 131 0.1649 0.1741 REMARK 3 6 2.5700 - 2.4200 1.00 2802 139 0.1764 0.2152 REMARK 3 7 2.4200 - 2.3000 1.00 2812 156 0.1594 0.1694 REMARK 3 8 2.3000 - 2.2000 1.00 2813 128 0.1677 0.1907 REMARK 3 9 2.2000 - 2.1200 1.00 2801 139 0.1678 0.1932 REMARK 3 10 2.1200 - 2.0400 1.00 2770 154 0.1785 0.1923 REMARK 3 11 2.0400 - 1.9800 1.00 2827 134 0.1801 0.1907 REMARK 3 12 1.9800 - 1.9200 1.00 2825 137 0.1695 0.2080 REMARK 3 13 1.9200 - 1.8700 1.00 2801 141 0.1950 0.2096 REMARK 3 14 1.8700 - 1.8300 1.00 2824 129 0.1896 0.2378 REMARK 3 15 1.8300 - 1.7900 1.00 2777 160 0.2077 0.2729 REMARK 3 16 1.7900 - 1.7500 1.00 2764 150 0.2256 0.2764 REMARK 3 17 1.7500 - 1.7100 1.00 2888 102 0.2520 0.3195 REMARK 3 18 1.7100 - 1.6800 1.00 2752 148 0.2722 0.2997 REMARK 3 19 1.6800 - 1.6500 1.00 2847 127 0.3075 0.3252 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 2072 REMARK 3 ANGLE : 1.092 2827 REMARK 3 CHIRALITY : 0.061 319 REMARK 3 PLANARITY : 0.011 378 REMARK 3 DIHEDRAL : 14.543 746 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 73 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.8989 -4.5048 -9.3776 REMARK 3 T TENSOR REMARK 3 T11: 0.1290 T22: 0.1842 REMARK 3 T33: 0.1913 T12: 0.0227 REMARK 3 T13: -0.0207 T23: 0.0009 REMARK 3 L TENSOR REMARK 3 L11: 1.5485 L22: 4.7804 REMARK 3 L33: 2.3106 L12: 1.1387 REMARK 3 L13: -0.6341 L23: -0.3497 REMARK 3 S TENSOR REMARK 3 S11: 0.0132 S12: -0.0519 S13: -0.0619 REMARK 3 S21: -0.0263 S22: 0.0178 S23: -0.2710 REMARK 3 S31: 0.1254 S32: 0.0395 S33: -0.0315 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 74 THROUGH 87 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.2136 -0.3730 -10.4208 REMARK 3 T TENSOR REMARK 3 T11: 0.1936 T22: 0.2433 REMARK 3 T33: 0.2907 T12: -0.0112 REMARK 3 T13: 0.0256 T23: -0.0282 REMARK 3 L TENSOR REMARK 3 L11: 8.5337 L22: 9.8595 REMARK 3 L33: 6.5281 L12: -3.0689 REMARK 3 L13: 3.2873 L23: -4.4144 REMARK 3 S TENSOR REMARK 3 S11: -0.1243 S12: -0.5489 S13: 0.3252 REMARK 3 S21: 0.1859 S22: -0.0763 S23: -0.8890 REMARK 3 S31: -0.2318 S32: 0.2250 S33: 0.1572 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 88 THROUGH 110 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.3691 -11.9802 -18.5784 REMARK 3 T TENSOR REMARK 3 T11: 0.2248 T22: 0.1684 REMARK 3 T33: 0.2873 T12: 0.0264 REMARK 3 T13: 0.0675 T23: -0.0175 REMARK 3 L TENSOR REMARK 3 L11: 2.8107 L22: 5.6006 REMARK 3 L33: 2.6371 L12: 2.6797 REMARK 3 L13: -1.2934 L23: 1.3473 REMARK 3 S TENSOR REMARK 3 S11: -0.1405 S12: -0.0285 S13: -0.3506 REMARK 3 S21: -0.3440 S22: 0.1630 S23: -0.7530 REMARK 3 S31: 0.0964 S32: 0.1837 S33: -0.0710 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 111 THROUGH 134 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.4289 -8.9138 -19.4619 REMARK 3 T TENSOR REMARK 3 T11: 0.2262 T22: 0.1994 REMARK 3 T33: 0.1616 T12: -0.0058 REMARK 3 T13: 0.0118 T23: -0.0051 REMARK 3 L TENSOR REMARK 3 L11: 3.9757 L22: 6.7874 REMARK 3 L33: 3.2425 L12: -0.0976 REMARK 3 L13: 0.4227 L23: 1.0124 REMARK 3 S TENSOR REMARK 3 S11: -0.1079 S12: 0.3270 S13: -0.0280 REMARK 3 S21: -0.7033 S22: -0.0371 S23: 0.2157 REMARK 3 S31: -0.1079 S32: -0.2436 S33: 0.1128 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 135 THROUGH 153 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.0207 -11.0545 -10.6689 REMARK 3 T TENSOR REMARK 3 T11: 0.2218 T22: 0.1863 REMARK 3 T33: 0.1717 T12: -0.0094 REMARK 3 T13: -0.0072 T23: 0.0024 REMARK 3 L TENSOR REMARK 3 L11: 5.9228 L22: 8.3889 REMARK 3 L33: 6.4759 L12: -2.7977 REMARK 3 L13: -3.0172 L23: 5.1448 REMARK 3 S TENSOR REMARK 3 S11: -0.4271 S12: -0.0691 S13: -0.1570 REMARK 3 S21: 0.7707 S22: 0.1570 S23: 0.1001 REMARK 3 S31: 0.6260 S32: -0.1804 S33: 0.3174 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 154 THROUGH 187 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.9795 11.7585 -10.8809 REMARK 3 T TENSOR REMARK 3 T11: 0.4864 T22: 0.3725 REMARK 3 T33: 0.3525 T12: -0.0011 REMARK 3 T13: -0.0239 T23: -0.0909 REMARK 3 L TENSOR REMARK 3 L11: 4.2537 L22: 7.8818 REMARK 3 L33: 5.1555 L12: 0.0468 REMARK 3 L13: 0.5184 L23: 3.7612 REMARK 3 S TENSOR REMARK 3 S11: -0.1669 S12: 0.6814 S13: -0.6381 REMARK 3 S21: -1.0780 S22: 0.2680 S23: 0.3049 REMARK 3 S31: 0.6100 S32: -0.3191 S33: -0.1903 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 188 THROUGH 203 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.9948 -12.7278 -17.1787 REMARK 3 T TENSOR REMARK 3 T11: 0.3128 T22: 0.5409 REMARK 3 T33: 0.4133 T12: 0.0187 REMARK 3 T13: -0.0688 T23: -0.0818 REMARK 3 L TENSOR REMARK 3 L11: 4.7663 L22: 7.0735 REMARK 3 L33: 5.7680 L12: 0.9503 REMARK 3 L13: -1.3611 L23: 2.1231 REMARK 3 S TENSOR REMARK 3 S11: -0.2182 S12: 0.5540 S13: 0.0785 REMARK 3 S21: -0.4463 S22: -0.4037 S23: 1.6598 REMARK 3 S31: -0.0448 S32: -1.9709 S33: 0.4987 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 204 THROUGH 226 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.8696 5.6968 -0.4440 REMARK 3 T TENSOR REMARK 3 T11: 0.1586 T22: 0.2238 REMARK 3 T33: 0.2228 T12: 0.0353 REMARK 3 T13: -0.0063 T23: -0.0250 REMARK 3 L TENSOR REMARK 3 L11: 2.4337 L22: 3.5169 REMARK 3 L33: 3.2631 L12: 1.6678 REMARK 3 L13: -0.8081 L23: -0.2623 REMARK 3 S TENSOR REMARK 3 S11: 0.2030 S12: -0.0683 S13: -0.0342 REMARK 3 S21: 0.4226 S22: -0.1634 S23: 0.0791 REMARK 3 S31: -0.1437 S32: 0.0118 S33: -0.0792 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 227 THROUGH 255 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.4333 19.7502 -7.1456 REMARK 3 T TENSOR REMARK 3 T11: 0.2913 T22: 0.2552 REMARK 3 T33: 0.2589 T12: 0.0253 REMARK 3 T13: 0.0087 T23: -0.0102 REMARK 3 L TENSOR REMARK 3 L11: 2.8003 L22: 3.3550 REMARK 3 L33: 6.5633 L12: -1.7971 REMARK 3 L13: -2.7584 L23: 1.6271 REMARK 3 S TENSOR REMARK 3 S11: 0.3218 S12: 0.2158 S13: 0.3036 REMARK 3 S21: -0.3150 S22: -0.1666 S23: -0.2317 REMARK 3 S31: -0.6838 S32: -0.0812 S33: -0.1272 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 256 THROUGH 277 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.1927 -1.4822 -0.1329 REMARK 3 T TENSOR REMARK 3 T11: 0.2535 T22: 0.2635 REMARK 3 T33: 0.2332 T12: -0.0096 REMARK 3 T13: -0.0018 T23: 0.0183 REMARK 3 L TENSOR REMARK 3 L11: 1.4074 L22: 2.4597 REMARK 3 L33: 2.6937 L12: -0.0814 REMARK 3 L13: -0.1906 L23: 1.1240 REMARK 3 S TENSOR REMARK 3 S11: -0.0716 S12: -0.0557 S13: -0.0832 REMARK 3 S21: 0.0899 S22: -0.3123 S23: 0.5445 REMARK 3 S31: -0.0042 S32: -0.2353 S33: 0.3827 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 28JB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-JUL-26. REMARK 100 THE DEPOSITION ID IS D_1292152894. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-JUN-25 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID30B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8731 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 S 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29799 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.650 REMARK 200 RESOLUTION RANGE LOW (A) : 91.860 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.00 REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.68 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 10.40 REMARK 200 R MERGE FOR SHELL (I) : 0.89800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.93 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MAGNESIUM CHLORIDE, 0.1 M TRIS REMARK 280 -HCL PH 8.5 AND 30% (W/V) PEG4000, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 19.36100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 45.92900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.75100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 45.92900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 19.36100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 33.75100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 250 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11420 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 150 REMARK 465 GLU A 151 REMARK 465 PHE A 169 REMARK 465 ALA A 170 REMARK 465 ALA A 171 REMARK 465 THR A 172 REMARK 465 ASP A 173 REMARK 465 ALA A 174 REMARK 465 ALA A 175 REMARK 465 ALA A 176 REMARK 465 GLY A 177 REMARK 465 THR A 178 REMARK 465 ALA A 179 REMARK 465 PRO A 278 REMARK 465 SER A 279 REMARK 465 GLN A 280 REMARK 465 GLU A 281 REMARK 465 GLN A 282 REMARK 465 VAL A 283 REMARK 465 PRO A 284 REMARK 465 ARG A 285 REMARK 465 CYS A 286 REMARK 465 SER A 287 REMARK 465 SER A 288 REMARK 465 GLY A 289 REMARK 465 THR A 290 REMARK 465 ARG A 291 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 607 O HOH A 617 1.18 REMARK 500 OD1 ASP A 189 O HOH A 501 1.20 REMARK 500 HE ARG A 255 O HOH A 506 1.35 REMARK 500 HH21 ARG A 255 O HOH A 506 1.51 REMARK 500 O HOH A 598 O HOH A 608 1.66 REMARK 500 O ASP A 277 O HOH A 502 1.79 REMARK 500 OD1 ASP A 180 O HOH A 503 1.79 REMARK 500 O HOH A 574 O HOH A 582 1.81 REMARK 500 O HOH A 602 O HOH A 615 1.85 REMARK 500 O HOH A 518 O HOH A 521 1.91 REMARK 500 O HOH A 516 O HOH A 590 1.95 REMARK 500 O SER A 275 O HOH A 504 1.95 REMARK 500 OE1 GLN A 163 O HOH A 505 1.97 REMARK 500 O HOH A 628 O HOH A 629 1.98 REMARK 500 O HOH A 506 O HOH A 541 2.01 REMARK 500 NE ARG A 255 O HOH A 506 2.05 REMARK 500 O HOH A 626 O HOH A 629 2.06 REMARK 500 NH2 ARG A 255 O HOH A 506 2.14 REMARK 500 OD1 ASP A 277 O HOH A 507 2.18 REMARK 500 OE1 GLU A 218 O HOH A 508 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD2 ASP A 14 HH12 ARG A 256 4555 1.59 REMARK 500 O HOH A 603 O HOH A 618 4545 1.83 REMARK 500 O HOH A 627 O HOH A 630 3644 1.92 REMARK 500 O HOH A 597 O HOH A 608 3654 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 23 -58.38 -159.63 REMARK 500 ALA A 101 76.19 -155.42 REMARK 500 ASP A 123 75.36 51.70 REMARK 500 ASP A 153 -79.68 -150.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 628 DISTANCE = 5.81 ANGSTROMS REMARK 525 HOH A 629 DISTANCE = 5.85 ANGSTROMS REMARK 525 HOH A 630 DISTANCE = 6.80 ANGSTROMS DBREF 28JB A 1 291 PDB 28JB 28JB 1 291 SEQRES 1 A 291 MET THR ASP GLN LEU TRP ALA VAL TYR ASP THR VAL ALA SEQRES 2 A 291 ASP VAL TYR ASP GLU ILE GLY PRO ALA PHE PHE LYS PRO SEQRES 3 A 291 VAL GLY SER ARG LEU VAL GLY HIS ALA ALA VAL ALA PRO SEQRES 4 A 291 GLY GLU CYS ILE LEU ASP VAL GLY THR GLY ARG GLY ALA SEQRES 5 A 291 VAL LEU PHE PRO ALA ALA ALA ALA THR GLY PRO ASP GLY SEQRES 6 A 291 GLU VAL THR GLY ILE ASP LEU ALA PRO ARG MET ILE GLU SEQRES 7 A 291 PHE LEU ARG ASP ASP ILE ALA ARG ARG GLY THR VAL ASN SEQRES 8 A 291 VAL ARG ALA VAL VAL MET ASP GLY ARG ALA PRO THR PHE SEQRES 9 A 291 ALA PRO GLY THR PHE ASP LEU ILE THR ALA SER MET SER SEQRES 10 A 291 LEU PRO LEU VAL PRO ASP HIS PRO ALA THR LEU ALA ASN SEQRES 11 A 291 TYR ALA ARG LEU LEU ARG PRO GLY GLY ARG ILE ALA LEU SEQRES 12 A 291 ALA VAL PRO GLY ALA GLY THR GLU GLY ASP GLY SER GLN SEQRES 13 A 291 ILE ALA LEU GLU PHE PHE GLN ARG ALA MET ARG ASP PHE SEQRES 14 A 291 ALA ALA THR ASP ALA ALA ALA GLY THR ALA ASP ALA LEU SEQRES 15 A 291 ASP ALA ALA ASP GLU VAL ASP ALA ILE THR ARG HIS LEU SEQRES 16 A 291 ARG GLY ALA GLY PHE ALA GLU PRO ARG ILE VAL VAL GLU SEQRES 17 A 291 ASP VAL PRO LEU VAL ALA ALA SER GLY GLU GLU PHE VAL SEQRES 18 A 291 ARG TRP THR TYR ALA GLN GLY LEU ARG LEU PHE TRP ASP SEQRES 19 A 291 MET ILE PRO GLN GLU ARG ARG PRO ASP LEU GLU ARG GLN SEQRES 20 A 291 LEU ALA ALA GLU LEU ASP THR ARG ARG ASP ALA ASP GLY SEQRES 21 A 291 CYS ILE ARG LEU THR ASN PRO VAL CYS PHE ILE VAL ALA SEQRES 22 A 291 THR SER PRO ASP PRO SER GLN GLU GLN VAL PRO ARG CYS SEQRES 23 A 291 SER SER GLY THR ARG HET GOL A 401 14 HET SAH A 402 44 HETNAM GOL GLYCEROL HETNAM SAH S-ADENOSYL-L-HOMOCYSTEINE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 GOL C3 H8 O3 FORMUL 3 SAH C14 H20 N6 O5 S FORMUL 4 HOH *130(H2 O) HELIX 1 AA1 ASP A 3 VAL A 12 1 10 HELIX 2 AA2 PHE A 23 ALA A 36 1 14 HELIX 3 AA3 VAL A 53 GLY A 62 1 10 HELIX 4 AA4 ALA A 73 GLY A 88 1 16 HELIX 5 AA5 SER A 117 VAL A 121 5 5 HELIX 6 AA6 ASP A 123 LEU A 134 1 12 HELIX 7 AA7 ASP A 153 ASP A 168 1 16 HELIX 8 AA8 LEU A 182 ASP A 186 5 5 HELIX 9 AA9 GLU A 187 ALA A 198 1 12 HELIX 10 AB1 SER A 216 ALA A 226 1 11 HELIX 11 AB2 LEU A 229 ILE A 236 1 8 HELIX 12 AB3 PRO A 237 GLU A 239 5 3 HELIX 13 AB4 ARG A 240 THR A 254 1 15 SHEET 1 AA1 7 VAL A 92 VAL A 96 0 SHEET 2 AA1 7 GLU A 66 ASP A 71 1 N GLY A 69 O ARG A 93 SHEET 3 AA1 7 CYS A 42 VAL A 46 1 N ASP A 45 O THR A 68 SHEET 4 AA1 7 PHE A 109 SER A 115 1 O THR A 113 N VAL A 46 SHEET 5 AA1 7 LEU A 135 PRO A 146 1 O ARG A 136 N PHE A 109 SHEET 6 AA1 7 ILE A 262 THR A 274 -1 O ILE A 271 N LEU A 143 SHEET 7 AA1 7 ARG A 204 ALA A 214 -1 N VAL A 206 O PHE A 270 CRYST1 38.722 67.502 91.858 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025825 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014814 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010886 0.00000 CONECT 3961 3962 3963 3967 3968 CONECT 3962 3961 3969 CONECT 3963 3961 3964 3965 3970 CONECT 3964 3963 3971 CONECT 3965 3963 3966 3972 3973 CONECT 3966 3965 3974 CONECT 3967 3961 CONECT 3968 3961 CONECT 3969 3962 CONECT 3970 3963 CONECT 3971 3964 CONECT 3972 3965 CONECT 3973 3965 CONECT 3974 3966 CONECT 3975 3976 4001 4002 CONECT 3976 3975 3977 3980 4003 CONECT 3977 3976 3978 4004 4005 CONECT 3978 3977 3979 4006 4007 CONECT 3979 3978 3983 CONECT 3980 3976 3981 3982 CONECT 3981 3980 CONECT 3982 3980 CONECT 3983 3979 3984 4008 4009 CONECT 3984 3983 3985 3986 4010 CONECT 3985 3984 3990 CONECT 3986 3984 3987 3988 4011 CONECT 3987 3986 4012 CONECT 3988 3986 3989 3990 4013 CONECT 3989 3988 4014 CONECT 3990 3985 3988 3991 4015 CONECT 3991 3990 3992 4000 CONECT 3992 3991 3993 4016 CONECT 3993 3992 3994 CONECT 3994 3993 3995 4000 CONECT 3995 3994 3996 3997 CONECT 3996 3995 4017 4018 CONECT 3997 3995 3998 CONECT 3998 3997 3999 CONECT 3999 3998 4000 CONECT 4000 3991 3994 3999 CONECT 4001 3975 CONECT 4002 3975 CONECT 4003 3976 CONECT 4004 3977 CONECT 4005 3977 CONECT 4006 3978 CONECT 4007 3978 CONECT 4008 3983 CONECT 4009 3983 CONECT 4010 3984 CONECT 4011 3986 CONECT 4012 3987 CONECT 4013 3988 CONECT 4014 3989 CONECT 4015 3990 CONECT 4016 3992 CONECT 4017 3996 CONECT 4018 3996 MASTER 483 0 2 13 7 0 0 6 2149 1 58 23 END