HEADER OXIDOREDUCTASE 19-MAR-26 29KZ TITLE L-DOPA EXTRADIOL DIOXYGENASE FROM BETA VULGARIS IN COMPLEX WITH L-DOPA COMPND MOL_ID: 1; COMPND 2 MOLECULE: 4,5-DOPA DIOXYGENASE EXTRADIOL 1; COMPND 3 CHAIN: A; COMPND 4 EC: 1.13.11.29; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BETA VULGARIS; SOURCE 3 ORGANISM_TAXID: 161934; SOURCE 4 GENE: DODA1; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS DODA, BETALAMIC ACID, BETA VULGARIS, L-DOPA EXTRADIOL DIOXYGENASE, KEYWDS 2 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR A.KLUZA,M.HAPKE,K.SEWERYN-OZOG,A.M.MILACZEWSKA-KREGIEL,T.BOROWSKI REVDAT 1 12-AUG-26 29KZ 0 JRNL AUTH A.KLUZA,M.HAPKE,K.SEWERYN-OZOG,A.M.MILACZEWSKA,T.BOROWSKI JRNL TITL STRUCTURAL AND MECHANISTIC INSIGHT INTO OXIDATIVE RING JRNL TITL 2 OPENING CATALYZED BY L-DOPA EXTRADIOL DIOXYGENASE FROM BETA JRNL TITL 3 VULGARIS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.21.2_5419 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.67 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 35355 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.164 REMARK 3 R VALUE (WORKING SET) : 0.163 REMARK 3 FREE R VALUE : 0.197 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1768 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.6700 - 4.2300 1.00 2784 147 0.1570 0.1930 REMARK 3 2 4.2300 - 3.3600 1.00 2645 139 0.1369 0.1502 REMARK 3 3 3.3600 - 2.9300 1.00 2610 138 0.1517 0.1960 REMARK 3 4 2.9300 - 2.6700 1.00 2595 136 0.1456 0.1663 REMARK 3 5 2.6700 - 2.4800 1.00 2581 136 0.1447 0.2134 REMARK 3 6 2.4800 - 2.3300 1.00 2560 135 0.1550 0.1798 REMARK 3 7 2.3300 - 2.2100 1.00 2556 134 0.1642 0.2119 REMARK 3 8 2.2100 - 2.1200 1.00 2559 135 0.1677 0.2260 REMARK 3 9 2.1200 - 2.0300 1.00 2555 135 0.1944 0.2427 REMARK 3 10 2.0300 - 1.9600 1.00 2528 133 0.2104 0.2358 REMARK 3 11 1.9600 - 1.9000 1.00 2544 134 0.2514 0.2739 REMARK 3 12 1.9000 - 1.8500 1.00 2532 133 0.2565 0.2878 REMARK 3 13 1.8500 - 1.8000 1.00 2538 133 0.2867 0.3298 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.192 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.339 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 35.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.28 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2275 REMARK 3 ANGLE : 0.840 3101 REMARK 3 CHIRALITY : 0.054 325 REMARK 3 PLANARITY : 0.008 399 REMARK 3 DIHEDRAL : 12.498 804 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 10 THROUGH 78) REMARK 3 ORIGIN FOR THE GROUP (A): 27.9765 -4.4310 -14.1999 REMARK 3 T TENSOR REMARK 3 T11: 0.2179 T22: 0.2369 REMARK 3 T33: 0.2411 T12: 0.0049 REMARK 3 T13: -0.0322 T23: -0.0044 REMARK 3 L TENSOR REMARK 3 L11: 2.4099 L22: 2.3485 REMARK 3 L33: 2.1114 L12: 0.1080 REMARK 3 L13: -0.3207 L23: 0.2287 REMARK 3 S TENSOR REMARK 3 S11: -0.0419 S12: -0.0003 S13: 0.1578 REMARK 3 S21: 0.1145 S22: 0.0499 S23: -0.1959 REMARK 3 S31: -0.1206 S32: 0.1572 S33: -0.0077 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 79 THROUGH 170 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.8026 -6.4108 -10.1322 REMARK 3 T TENSOR REMARK 3 T11: 0.2823 T22: 0.2788 REMARK 3 T33: 0.2632 T12: 0.0011 REMARK 3 T13: 0.0100 T23: 0.0019 REMARK 3 L TENSOR REMARK 3 L11: 1.6580 L22: 1.5590 REMARK 3 L33: 1.0213 L12: -0.4290 REMARK 3 L13: -0.1358 L23: 0.3332 REMARK 3 S TENSOR REMARK 3 S11: -0.0325 S12: -0.2146 S13: 0.0614 REMARK 3 S21: 0.2076 S22: 0.0716 S23: -0.0473 REMARK 3 S31: -0.0272 S32: 0.0013 S33: -0.0397 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 171 THROUGH 210 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.6540 3.2536 -29.3623 REMARK 3 T TENSOR REMARK 3 T11: 0.2448 T22: 0.3450 REMARK 3 T33: 0.3079 T12: -0.0397 REMARK 3 T13: 0.0117 T23: 0.0323 REMARK 3 L TENSOR REMARK 3 L11: 2.0674 L22: 3.0793 REMARK 3 L33: 5.8901 L12: 0.6198 REMARK 3 L13: 0.2915 L23: -0.8495 REMARK 3 S TENSOR REMARK 3 S11: -0.1282 S12: 0.4103 S13: 0.1023 REMARK 3 S21: -0.4184 S22: 0.1695 S23: 0.0121 REMARK 3 S31: 0.1134 S32: -0.0118 S33: -0.0338 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 211 THROUGH 275 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.4942 6.6709 -22.6752 REMARK 3 T TENSOR REMARK 3 T11: 0.1975 T22: 0.1745 REMARK 3 T33: 0.2291 T12: -0.0063 REMARK 3 T13: 0.0004 T23: 0.0499 REMARK 3 L TENSOR REMARK 3 L11: 2.4826 L22: 2.2047 REMARK 3 L33: 3.2263 L12: 0.0708 REMARK 3 L13: -0.4569 L23: 0.3585 REMARK 3 S TENSOR REMARK 3 S11: -0.0402 S12: 0.2481 S13: 0.3549 REMARK 3 S21: -0.0368 S22: 0.0827 S23: 0.0589 REMARK 3 S31: -0.1786 S32: -0.1794 S33: -0.0230 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 29KZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 03-AUG-26. REMARK 100 THE DEPOSITION ID IS D_1292155335. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-APR-25 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P14 (MX2) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9763 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X CDTE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35359 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 47.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 17.70 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.91 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.96 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM MAGNESIUM CHLORIDE, 0.2 M REMARK 280 AMMONIUM SULPHATE, 0.1 M MES PH 6.5, 25 % PEG 3350, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 47.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 44.35500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 44.35500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 23.50000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 44.35500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 44.35500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 70.50000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 44.35500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 44.35500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 23.50000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 44.35500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 44.35500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 70.50000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 47.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1730 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11130 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 7.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 MG MG A 305 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 459 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 516 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 663 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 MET A 3 REMARK 465 MET A 4 REMARK 465 ASN A 5 REMARK 465 GLY A 6 REMARK 465 GLU A 7 REMARK 465 ASP A 8 REMARK 465 ALA A 9 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 10 CG OD1 ND2 REMARK 470 ASP A 11 CG OD1 OD2 REMARK 470 LYS A 110 CG CD CE NZ REMARK 470 GLU A 114 CG CD OE1 OE2 REMARK 470 GLU A 117 CG CD OE1 OE2 REMARK 470 LYS A 121 CG CD CE NZ REMARK 470 ASP A 192 CG OD1 OD2 REMARK 470 GLU A 215 CG CD OE1 OE2 REMARK 470 GLU A 249 CG CD OE1 OE2 REMARK 470 LYS A 250 CG CD CE NZ REMARK 470 LYS A 252 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 538 O HOH A 627 2.04 REMARK 500 OE1 GLU A 254 O HOH A 402 2.11 REMARK 500 OE1 GLN A 12 O HOH A 403 2.12 REMARK 500 O HOH A 433 O HOH A 505 2.12 REMARK 500 O HOH A 453 O HOH A 605 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 598 O HOH A 598 7555 2.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 182 65.16 -154.17 REMARK 500 HIS A 262 43.80 38.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 311 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 22 NE2 REMARK 620 2 HIS A 60 NE2 95.9 REMARK 620 3 HIS A 236 NE2 94.4 94.2 REMARK 620 4 DAH A 304 OE2 88.9 168.5 95.8 REMARK 620 5 DAH A 304 OH 93.1 86.9 172.2 82.5 REMARK 620 6 HOH A 526 O 172.8 91.1 86.4 84.0 85.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 305 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 454 O REMARK 620 2 HOH A 454 O 178.8 REMARK 620 3 HOH A 459 O 89.3 89.5 REMARK 620 4 HOH A 459 O 89.5 89.3 0.7 REMARK 620 5 HOH A 593 O 90.8 89.4 96.2 95.6 REMARK 620 6 HOH A 593 O 89.4 90.8 95.6 96.2 168.2 REMARK 620 7 HOH A 663 O 90.0 91.2 179.2 179.4 84.0 84.1 REMARK 620 8 HOH A 663 O 91.2 90.0 179.4 179.2 84.1 84.0 1.3 REMARK 620 N 1 2 3 4 5 6 7 DBREF 29KZ A 1 275 UNP I3PFJ9 DOD1W_BETVU 1 275 SEQADV 29KZ SER A -2 UNP I3PFJ9 EXPRESSION TAG SEQADV 29KZ ASN A -1 UNP I3PFJ9 EXPRESSION TAG SEQADV 29KZ ALA A 0 UNP I3PFJ9 EXPRESSION TAG SEQRES 1 A 278 SER ASN ALA MET LYS MET MET ASN GLY GLU ASP ALA ASN SEQRES 2 A 278 ASP GLN MET ILE LYS GLU SER PHE PHE ILE THR HIS GLY SEQRES 3 A 278 ASN PRO ILE LEU THR VAL GLU ASP THR HIS PRO LEU ARG SEQRES 4 A 278 PRO PHE PHE GLU THR TRP ARG GLU LYS ILE PHE SER LYS SEQRES 5 A 278 LYS PRO LYS ALA ILE LEU ILE ILE SER GLY HIS TRP GLU SEQRES 6 A 278 THR VAL LYS PRO THR VAL ASN ALA VAL HIS ILE ASN ASP SEQRES 7 A 278 THR ILE HIS ASP PHE ASP ASP TYR PRO ALA ALA MET TYR SEQRES 8 A 278 GLN PHE LYS TYR PRO ALA PRO GLY GLU PRO GLU LEU ALA SEQRES 9 A 278 ARG LYS VAL GLU GLU ILE LEU LYS LYS SER GLY PHE GLU SEQRES 10 A 278 THR ALA GLU THR ASP GLN LYS ARG GLY LEU ASP HIS GLY SEQRES 11 A 278 ALA TRP VAL PRO LEU MET LEU MET TYR PRO GLU ALA ASP SEQRES 12 A 278 ILE PRO VAL CYS GLN LEU SER VAL GLN PRO HIS LEU ASP SEQRES 13 A 278 GLY THR TYR HIS TYR ASN LEU GLY ARG ALA LEU ALA PRO SEQRES 14 A 278 LEU LYS ASN ASP GLY VAL LEU ILE ILE GLY SER GLY SER SEQRES 15 A 278 ALA THR HIS PRO LEU ASP GLU THR PRO HIS TYR PHE ASP SEQRES 16 A 278 GLY VAL ALA PRO TRP ALA ALA ALA PHE ASP SER TRP LEU SEQRES 17 A 278 ARG LYS ALA LEU ILE ASN GLY ARG PHE GLU GLU VAL ASN SEQRES 18 A 278 ILE TYR GLU SER LYS ALA PRO ASN TRP LYS LEU ALA HIS SEQRES 19 A 278 PRO PHE PRO GLU HIS PHE TYR PRO LEU HIS VAL VAL LEU SEQRES 20 A 278 GLY ALA ALA GLY GLU LYS TRP LYS ALA GLU LEU ILE HIS SEQRES 21 A 278 SER SER TRP ASP HIS GLY THR LEU CYS HIS GLY SER TYR SEQRES 22 A 278 LYS PHE THR SER ALA HET EDO A 301 10 HET EDO A 302 10 HET EDO A 303 10 HET DAH A 304 22 HET MG A 305 1 HET EDO A 306 10 HET EDO A 307 10 HET EDO A 308 10 HET EDO A 309 10 HET EDO A 310 10 HET NI A 311 1 HET EDO A 312 10 HET EDO A 313 10 HETNAM EDO 1,2-ETHANEDIOL HETNAM DAH 3,4-DIHYDROXYPHENYLALANINE HETNAM MG MAGNESIUM ION HETNAM NI NICKEL (II) ION HETSYN EDO ETHYLENE GLYCOL HETSYN DAH L-DOPA FORMUL 2 EDO 10(C2 H6 O2) FORMUL 5 DAH C9 H11 N O4 FORMUL 6 MG MG 2+ FORMUL 12 NI NI 2+ FORMUL 15 HOH *263(H2 O) HELIX 1 AA1 ASN A 24 VAL A 29 5 6 HELIX 2 AA2 PRO A 34 THR A 41 1 8 HELIX 3 AA3 THR A 41 ILE A 46 1 6 HELIX 4 AA4 PRO A 84 PHE A 90 5 7 HELIX 5 AA5 GLU A 97 LYS A 110 1 14 HELIX 6 AA6 ASP A 125 TYR A 136 1 12 HELIX 7 AA7 ASP A 153 ALA A 165 1 13 HELIX 8 AA8 PRO A 166 ASP A 170 5 5 HELIX 9 AA9 ALA A 195 ASN A 211 1 17 HELIX 10 AB1 ARG A 213 ILE A 219 1 7 HELIX 11 AB2 ILE A 219 ALA A 224 1 6 HELIX 12 AB3 ASN A 226 HIS A 231 1 6 HELIX 13 AB4 PHE A 237 ALA A 247 1 11 SHEET 1 AA1 6 VAL A 143 GLN A 145 0 SHEET 2 AA1 6 ALA A 53 SER A 58 1 N ILE A 56 O CYS A 144 SHEET 3 AA1 6 VAL A 172 GLY A 178 1 O SER A 177 N ILE A 57 SHEET 4 AA1 6 GLU A 16 THR A 21 1 N ILE A 20 O GLY A 176 SHEET 5 AA1 6 SER A 269 SER A 274 -1 O PHE A 272 N SER A 17 SHEET 6 AA1 6 TRP A 251 HIS A 257 -1 N LYS A 252 O THR A 273 SHEET 1 AA2 2 TRP A 260 ASP A 261 0 SHEET 2 AA2 2 LEU A 265 CYS A 266 -1 O LEU A 265 N ASP A 261 LINK NE2 HIS A 22 NI NI A 311 1555 1555 2.09 LINK NE2 HIS A 60 NI NI A 311 1555 1555 2.02 LINK NE2 HIS A 236 NI NI A 311 1555 1555 2.10 LINK OE2 DAH A 304 NI NI A 311 1555 1555 2.16 LINK OH DAH A 304 NI NI A 311 1555 1555 2.04 LINK MG MG A 305 O HOH A 454 1555 1555 2.10 LINK MG MG A 305 O HOH A 454 1555 8554 2.10 LINK MG MG A 305 O HOH A 459 1555 1555 2.04 LINK MG MG A 305 O HOH A 459 1555 8554 2.04 LINK MG MG A 305 O HOH A 593 1555 1555 2.10 LINK MG MG A 305 O HOH A 593 1555 8554 2.10 LINK MG MG A 305 O HOH A 663 1555 1555 2.12 LINK MG MG A 305 O HOH A 663 1555 8554 2.12 LINK NI NI A 311 O HOH A 526 1555 1555 2.17 CRYST1 88.710 88.710 94.000 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011273 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011273 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010638 0.00000 CONECT 211 4309 CONECT 885 4309 CONECT 3628 4309 CONECT 4206 4207 4208 4210 4211 CONECT 4207 4206 4212 CONECT 4208 4206 4209 4213 4214 CONECT 4209 4208 4215 CONECT 4210 4206 CONECT 4211 4206 CONECT 4212 4207 CONECT 4213 4208 CONECT 4214 4208 CONECT 4215 4209 CONECT 4216 4217 4218 4220 4221 CONECT 4217 4216 4222 CONECT 4218 4216 4219 4223 4224 CONECT 4219 4218 4225 CONECT 4220 4216 CONECT 4221 4216 CONECT 4222 4217 CONECT 4223 4218 CONECT 4224 4218 CONECT 4225 4219 CONECT 4226 4227 4228 4230 4231 CONECT 4227 4226 4232 CONECT 4228 4226 4229 4233 4234 CONECT 4229 4228 4235 CONECT 4230 4226 CONECT 4231 4226 CONECT 4232 4227 CONECT 4233 4228 CONECT 4234 4228 CONECT 4235 4229 CONECT 4236 4237 4250 4251 CONECT 4237 4236 4238 4240 4252 CONECT 4238 4237 4239 4249 CONECT 4239 4238 CONECT 4240 4237 4241 4253 4254 CONECT 4241 4240 4242 4243 CONECT 4242 4241 4244 4255 CONECT 4243 4241 4245 4256 CONECT 4244 4242 4246 4257 CONECT 4245 4243 4246 4247 CONECT 4246 4244 4245 4248 CONECT 4247 4245 4309 CONECT 4248 4246 4309 CONECT 4249 4238 CONECT 4250 4236 CONECT 4251 4236 CONECT 4252 4237 CONECT 4253 4240 CONECT 4254 4240 CONECT 4255 4242 CONECT 4256 4243 CONECT 4257 4244 CONECT 4258 4383 4388 4522 4592 CONECT 4259 4260 4261 4263 4264 CONECT 4260 4259 4265 CONECT 4261 4259 4262 4266 4267 CONECT 4262 4261 4268 CONECT 4263 4259 CONECT 4264 4259 CONECT 4265 4260 CONECT 4266 4261 CONECT 4267 4261 CONECT 4268 4262 CONECT 4269 4270 4271 4273 4274 CONECT 4270 4269 4275 CONECT 4271 4269 4272 4276 4277 CONECT 4272 4271 4278 CONECT 4273 4269 CONECT 4274 4269 CONECT 4275 4270 CONECT 4276 4271 CONECT 4277 4271 CONECT 4278 4272 CONECT 4279 4280 4281 4283 4284 CONECT 4280 4279 4285 CONECT 4281 4279 4282 4286 4287 CONECT 4282 4281 4288 CONECT 4283 4279 CONECT 4284 4279 CONECT 4285 4280 CONECT 4286 4281 CONECT 4287 4281 CONECT 4288 4282 CONECT 4289 4290 4291 4293 4294 CONECT 4290 4289 4295 CONECT 4291 4289 4292 4296 4297 CONECT 4292 4291 4298 CONECT 4293 4289 CONECT 4294 4289 CONECT 4295 4290 CONECT 4296 4291 CONECT 4297 4291 CONECT 4298 4292 CONECT 4299 4300 4301 4303 4304 CONECT 4300 4299 4305 CONECT 4301 4299 4302 4306 4307 CONECT 4302 4301 4308 CONECT 4303 4299 CONECT 4304 4299 CONECT 4305 4300 CONECT 4306 4301 CONECT 4307 4301 CONECT 4308 4302 CONECT 4309 211 885 3628 4247 CONECT 4309 4248 4455 CONECT 4310 4311 4312 4314 4315 CONECT 4311 4310 4316 CONECT 4312 4310 4313 4317 4318 CONECT 4313 4312 4319 CONECT 4314 4310 CONECT 4315 4310 CONECT 4316 4311 CONECT 4317 4312 CONECT 4318 4312 CONECT 4319 4313 CONECT 4320 4321 4322 4324 4325 CONECT 4321 4320 4326 CONECT 4322 4320 4323 4327 4328 CONECT 4323 4322 4329 CONECT 4324 4320 CONECT 4325 4320 CONECT 4326 4321 CONECT 4327 4322 CONECT 4328 4322 CONECT 4329 4323 CONECT 4383 4258 CONECT 4388 4258 CONECT 4455 4309 CONECT 4522 4258 CONECT 4592 4258 MASTER 408 0 13 13 8 0 0 6 2417 1 133 22 END