HEADER IMMUNE SYSTEM 07-APR-26 29TJ TITLE STRUCTURE OF THE PORCINE REPRODUCTIVE AND RESPIRATORY SYNDROME VIRUS-2 TITLE 2 GLYCOPROTEIN GP4 ANTIGENIC REGION 59-69 BOUND TO THE NEUTRALIZING TITLE 3 SCFV#18 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SCFV NO.18 ANTIBODY CHAIN; COMPND 3 CHAIN: B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: ENVELOPE GLYCOPROTEIN GP4; COMPND 7 CHAIN: P; COMPND 8 SYNONYM: GP4 ENVELOPE PROTEIN, ALA-SER-GLU-ALA-ILE-ARG-LYS-ILE-PRO- COMPND 9 GLN; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_TAXID: 10090; SOURCE 4 EXPRESSION_SYSTEM: DROSOPHILA MELANOGASTER; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 7227; SOURCE 6 EXPRESSION_SYSTEM_CELL_LINE: SCHNEIDER 2 CELLS; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 ORGANISM_SCIENTIFIC: PRRSV VR2332; SOURCE 10 ORGANISM_TAXID: 300559 KEYWDS PORCINE REPRODUCTIVE AND RESPIRATORY SYNDROME VIRUS, MONOCLONAL KEYWDS 2 NEUTRALIZING ANTIBODY, EPITOPE STRUCTURE, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR M.K.RAJAK,T.KREY REVDAT 1 08-JUL-26 29TJ 0 JRNL AUTH B.VESELKOVA,C.SAIKIA,S.AFFELDT,S.BARTH,M.K.RAJAK,F.BESA, JRNL AUTH 2 D.BEZBAKH,G.HANSEN,T.RUMENAPF,M.BALLMAIER, JRNL AUTH 3 O.DITTRICH-BREIHOLZ,H.BAMBER,K.NAGARATHINAM,A.W.TARR,B.LAMP, JRNL AUTH 4 T.KREY JRNL TITL STRUCTURAL BASIS OF PORCINE REPRODUCTIVE AND RESPIRATORY JRNL TITL 2 SYNDROME VIRUS 2 NEUTRALIZATION BY A GP4-TARGETING JRNL TITL 3 MONOCLONAL ANTIBODY. JRNL REF J.GEN.VIROL. V. 107 2026 JRNL REFN ESSN 1465-2099 JRNL PMID 42348291 JRNL DOI 10.1099/JGV.0.002284 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.4 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.55 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 80.3 REMARK 3 NUMBER OF REFLECTIONS : 14639 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 729 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.35 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 35.35 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : NULL REMARK 3 BIN R VALUE (WORKING + TEST SET) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2477 REMARK 3 BIN FREE R VALUE : 0.2811 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 24 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1926 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 17 REMARK 3 SOLVENT ATOMS : 175 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.21 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.97420 REMARK 3 B22 (A**2) : -6.29630 REMARK 3 B33 (A**2) : 8.27050 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.290 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.329 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.239 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.291 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.231 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.926 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.889 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 1985 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 2684 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 672 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 336 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 1985 ; 10.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 257 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 1748 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 0.97 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.27 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 16.22 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 21 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: {B|1 - 8} REMARK 3 ORIGIN FOR THE GROUP (A): -11.7172 3.603 -2.7771 REMARK 3 T TENSOR REMARK 3 T11: -0.2013 T22: -0.1416 REMARK 3 T33: 0.2461 T12: 0.0434 REMARK 3 T13: 0.0216 T23: -0.0306 REMARK 3 L TENSOR REMARK 3 L11: 1.4871 L22: 6.2775 REMARK 3 L33: 1.9785 L12: -2.3353 REMARK 3 L13: -5.0473 L23: 5.8208 REMARK 3 S TENSOR REMARK 3 S11: -0.175 S12: 0.3495 S13: 0.2539 REMARK 3 S21: 0.3495 S22: 0.4168 S23: 1.0885 REMARK 3 S31: 0.2539 S32: 1.0885 S33: -0.2418 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: {B|9 - 13} REMARK 3 ORIGIN FOR THE GROUP (A): -16.349 2.7867 -23.0596 REMARK 3 T TENSOR REMARK 3 T11: -0.0809 T22: 0.1196 REMARK 3 T33: 0.0788 T12: -0.0575 REMARK 3 T13: 0.1448 T23: -0.1655 REMARK 3 L TENSOR REMARK 3 L11: 0 L22: 5.3779 REMARK 3 L33: 0.0027 L12: 1.1827 REMARK 3 L13: 5.8208 L23: 1.2748 REMARK 3 S TENSOR REMARK 3 S11: 0.0898 S12: -0.0494 S13: 0.1633 REMARK 3 S21: -0.0494 S22: -0.0747 S23: -0.0657 REMARK 3 S31: 0.1633 S32: -0.0657 S33: -0.0152 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: {B|14 - 29} REMARK 3 ORIGIN FOR THE GROUP (A): -18.4118 -1.1132 -7.273 REMARK 3 T TENSOR REMARK 3 T11: -0.0431 T22: -0.2719 REMARK 3 T33: 0.1558 T12: 0.0804 REMARK 3 T13: -0.0159 T23: -0.068 REMARK 3 L TENSOR REMARK 3 L11: 5.0381 L22: 0.1042 REMARK 3 L33: 7.0224 L12: 2.1072 REMARK 3 L13: 4.1431 L23: 0.943 REMARK 3 S TENSOR REMARK 3 S11: -0.166 S12: -0.1186 S13: 0.5333 REMARK 3 S21: -0.1186 S22: -0.0563 S23: 1.0735 REMARK 3 S31: 0.5333 S32: 1.0735 S33: 0.2223 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: {B|30 - 38} REMARK 3 ORIGIN FOR THE GROUP (A): -23.8815 3.6849 -0.4234 REMARK 3 T TENSOR REMARK 3 T11: -0.16 T22: -0.0943 REMARK 3 T33: 0.1405 T12: -0.0516 REMARK 3 T13: -0.0482 T23: 0.0707 REMARK 3 L TENSOR REMARK 3 L11: 0.8716 L22: 0.1221 REMARK 3 L33: 0 L12: 1.1919 REMARK 3 L13: 0.7443 L23: 3.2173 REMARK 3 S TENSOR REMARK 3 S11: 0.3232 S12: -0.0205 S13: 0.1453 REMARK 3 S21: -0.0205 S22: -0.34 S23: 0.4031 REMARK 3 S31: 0.1453 S32: 0.4031 S33: 0.0168 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: {B|39 - 47} REMARK 3 ORIGIN FOR THE GROUP (A): -24.6092 15.2841 -11.7454 REMARK 3 T TENSOR REMARK 3 T11: 0.0031 T22: -0.2309 REMARK 3 T33: 0.1519 T12: -0.0061 REMARK 3 T13: 0.0395 T23: 0.1407 REMARK 3 L TENSOR REMARK 3 L11: 0.0092 L22: 8.2972 REMARK 3 L33: 4.285 L12: 0.5861 REMARK 3 L13: 1.9274 L23: 2.7563 REMARK 3 S TENSOR REMARK 3 S11: 0.1799 S12: -1.0843 S13: -0.2391 REMARK 3 S21: -1.0843 S22: 0.3318 S23: 0.1119 REMARK 3 S31: -0.2391 S32: 0.1119 S33: -0.5117 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: {B|48 - 62} REMARK 3 ORIGIN FOR THE GROUP (A): -30.6955 0.1903 -2.4513 REMARK 3 T TENSOR REMARK 3 T11: -0.1706 T22: -0.1747 REMARK 3 T33: 0.2052 T12: -0.0357 REMARK 3 T13: 0.0062 T23: 0.0791 REMARK 3 L TENSOR REMARK 3 L11: 0 L22: 7.0957 REMARK 3 L33: 2.6096 L12: 2.3658 REMARK 3 L13: -1.3679 L23: -1.4827 REMARK 3 S TENSOR REMARK 3 S11: 0.1273 S12: -0.1631 S13: 0.1061 REMARK 3 S21: -0.1631 S22: -0.0596 S23: -0.337 REMARK 3 S31: 0.1061 S32: -0.337 S33: -0.0677 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: {B|63 - 71} REMARK 3 ORIGIN FOR THE GROUP (A): -30.968 2.3319 -12.1361 REMARK 3 T TENSOR REMARK 3 T11: -0.1011 T22: -0.1684 REMARK 3 T33: 0.065 T12: -0.0187 REMARK 3 T13: 0.0104 T23: -0.0683 REMARK 3 L TENSOR REMARK 3 L11: 8.529 L22: 0 REMARK 3 L33: 4.0212 L12: 1.8106 REMARK 3 L13: 4.7444 L23: -3.758 REMARK 3 S TENSOR REMARK 3 S11: -0.3866 S12: -0.5011 S13: -0.0133 REMARK 3 S21: -0.5011 S22: 0.4495 S23: 0.1381 REMARK 3 S31: -0.0133 S32: 0.1381 S33: -0.0629 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: {B|72 - 89} REMARK 3 ORIGIN FOR THE GROUP (A): -22.6528 -1.6214 -11.2632 REMARK 3 T TENSOR REMARK 3 T11: -0.1539 T22: -0.279 REMARK 3 T33: 0.2208 T12: 0.0049 REMARK 3 T13: 0.0475 T23: -0.0681 REMARK 3 L TENSOR REMARK 3 L11: 4.1569 L22: 1.3369 REMARK 3 L33: 7.7298 L12: 1.3606 REMARK 3 L13: 1.0858 L23: -1.0851 REMARK 3 S TENSOR REMARK 3 S11: -0.1506 S12: -0.4349 S13: 0.585 REMARK 3 S21: -0.4349 S22: 0.3943 S23: 0.0491 REMARK 3 S31: 0.585 S32: 0.0491 S33: -0.2437 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: {B|90 - 114} REMARK 3 ORIGIN FOR THE GROUP (A): -20.4699 8.9807 -1.1893 REMARK 3 T TENSOR REMARK 3 T11: -0.0694 T22: -0.1278 REMARK 3 T33: 0.018 T12: 0.0011 REMARK 3 T13: -0.0494 T23: 0.0146 REMARK 3 L TENSOR REMARK 3 L11: 3.0193 L22: 0.1934 REMARK 3 L33: 0 L12: 1.3356 REMARK 3 L13: 0.5075 L23: -0.44 REMARK 3 S TENSOR REMARK 3 S11: 0.0478 S12: -0.0442 S13: 0.2071 REMARK 3 S21: -0.0442 S22: 0.0054 S23: 0.4243 REMARK 3 S31: 0.2071 S32: 0.4243 S33: -0.0532 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: {B|115 - 121} REMARK 3 ORIGIN FOR THE GROUP (A): -19.4968 7.7934 -24.4763 REMARK 3 T TENSOR REMARK 3 T11: -0.0858 T22: 0.2197 REMARK 3 T33: -0.1553 T12: -0.1633 REMARK 3 T13: 0.0762 T23: 0.0129 REMARK 3 L TENSOR REMARK 3 L11: 0.3841 L22: 14.2512 REMARK 3 L33: 0 L12: 1.5495 REMARK 3 L13: 0.0593 L23: 0.7443 REMARK 3 S TENSOR REMARK 3 S11: -0.2685 S12: -0.9877 S13: -0.6296 REMARK 3 S21: -0.9877 S22: 0.4426 S23: -0.2354 REMARK 3 S31: -0.6296 S32: -0.2354 S33: -0.1741 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: {B|139 - 150} REMARK 3 ORIGIN FOR THE GROUP (A): -33.9568 22.5422 -5.0672 REMARK 3 T TENSOR REMARK 3 T11: -0.2889 T22: -0.3059 REMARK 3 T33: 0.3672 T12: 0.0265 REMARK 3 T13: 0.0093 T23: 0.0494 REMARK 3 L TENSOR REMARK 3 L11: 4.2591 L22: 3.442 REMARK 3 L33: 1.6432 L12: -2.9027 REMARK 3 L13: 0.9824 L23: -1.1527 REMARK 3 S TENSOR REMARK 3 S11: 0.2834 S12: -0.1046 S13: -0.0493 REMARK 3 S21: -0.1046 S22: 0.0913 S23: 0.013 REMARK 3 S31: -0.0493 S32: 0.013 S33: -0.3746 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: {B|151 - 157} REMARK 3 ORIGIN FOR THE GROUP (A): -15.806 36.6844 -4.3282 REMARK 3 T TENSOR REMARK 3 T11: -0.3443 T22: -0.4444 REMARK 3 T33: 0.6079 T12: 0.1532 REMARK 3 T13: -0.1564 T23: -0.0848 REMARK 3 L TENSOR REMARK 3 L11: 1.7424 L22: 6.1817 REMARK 3 L33: 15.5492 L12: 5.2453 REMARK 3 L13: 3.307 L23: -0.8794 REMARK 3 S TENSOR REMARK 3 S11: 0.2686 S12: -1.063 S13: -0.0932 REMARK 3 S21: -1.063 S22: -0.2128 S23: -0.4247 REMARK 3 S31: -0.0932 S32: -0.4247 S33: -0.0558 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: {B|158 - 167} REMARK 3 ORIGIN FOR THE GROUP (A): -26.3594 31.4398 1.0024 REMARK 3 T TENSOR REMARK 3 T11: -0.2543 T22: -0.3114 REMARK 3 T33: 0.47 T12: 0.0149 REMARK 3 T13: 0.1408 T23: -0.1852 REMARK 3 L TENSOR REMARK 3 L11: 2.6501 L22: 13.7216 REMARK 3 L33: 0.1841 L12: 4.1698 REMARK 3 L13: 1.4087 L23: 1.9251 REMARK 3 S TENSOR REMARK 3 S11: 0.2313 S12: -0.4803 S13: 0.0175 REMARK 3 S21: -0.4803 S22: 0.0358 S23: -0.4146 REMARK 3 S31: 0.0175 S32: -0.4146 S33: -0.2671 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: {B|168 - 177} REMARK 3 ORIGIN FOR THE GROUP (A): -37.1434 17.413 10.8889 REMARK 3 T TENSOR REMARK 3 T11: -0.2302 T22: 0.058 REMARK 3 T33: 0.1681 T12: -0.0267 REMARK 3 T13: 0.128 T23: -0.1633 REMARK 3 L TENSOR REMARK 3 L11: 0 L22: 3.2894 REMARK 3 L33: 0 L12: 2.3197 REMARK 3 L13: -4.2568 L23: -0.4968 REMARK 3 S TENSOR REMARK 3 S11: 0.1522 S12: 0.6486 S13: -0.4853 REMARK 3 S21: 0.6486 S22: 0.4318 S23: -0.127 REMARK 3 S31: -0.4853 S32: -0.127 S33: -0.584 REMARK 3 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: {B|178 - 192} REMARK 3 ORIGIN FOR THE GROUP (A): -20.037 18.999 -0.5084 REMARK 3 T TENSOR REMARK 3 T11: -0.1387 T22: -0.1642 REMARK 3 T33: 0.1318 T12: -0.0195 REMARK 3 T13: -0.0092 T23: -0.079 REMARK 3 L TENSOR REMARK 3 L11: 11.7534 L22: 1.9717 REMARK 3 L33: 1.3848 L12: 1.9621 REMARK 3 L13: -4.7653 L23: -2.2397 REMARK 3 S TENSOR REMARK 3 S11: 0.0569 S12: 0.1184 S13: 0.1803 REMARK 3 S21: 0.1184 S22: 0.0492 S23: -0.005 REMARK 3 S31: 0.1803 S32: -0.005 S33: -0.1061 REMARK 3 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: {B|193 - 201} REMARK 3 ORIGIN FOR THE GROUP (A): -21.5613 19.7723 8.9168 REMARK 3 T TENSOR REMARK 3 T11: -0.1356 T22: -0.0005 REMARK 3 T33: 0.0449 T12: -0.0648 REMARK 3 T13: 0.0136 T23: -0.101 REMARK 3 L TENSOR REMARK 3 L11: 0 L22: 6.622 REMARK 3 L33: 3.2657 L12: 3.7781 REMARK 3 L13: -2.063 L23: 2.5231 REMARK 3 S TENSOR REMARK 3 S11: 0.2304 S12: 0.2476 S13: 0.3391 REMARK 3 S21: 0.2476 S22: 0.1438 S23: 0.1116 REMARK 3 S31: 0.3391 S32: 0.1116 S33: -0.3743 REMARK 3 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: {B|202 - 212} REMARK 3 ORIGIN FOR THE GROUP (A): -16.1246 24.3859 8.7586 REMARK 3 T TENSOR REMARK 3 T11: -0.3166 T22: -0.2192 REMARK 3 T33: 0.3983 T12: -0.1104 REMARK 3 T13: -0.0364 T23: -0.2271 REMARK 3 L TENSOR REMARK 3 L11: 6.4767 L22: 10.5527 REMARK 3 L33: 1.512 L12: -4.0738 REMARK 3 L13: 0.2043 L23: 0.084 REMARK 3 S TENSOR REMARK 3 S11: -0.0122 S12: 0.7663 S13: -0.1259 REMARK 3 S21: 0.7663 S22: -0.1746 S23: 0.1934 REMARK 3 S31: -0.1259 S32: 0.1934 S33: 0.1868 REMARK 3 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: {B|213 - 229} REMARK 3 ORIGIN FOR THE GROUP (A): -21.0372 29.1927 4.0298 REMARK 3 T TENSOR REMARK 3 T11: -0.3087 T22: -0.2682 REMARK 3 T33: 0.4268 T12: -0.0009 REMARK 3 T13: -0.0334 T23: -0.1749 REMARK 3 L TENSOR REMARK 3 L11: 9.9541 L22: 4.062 REMARK 3 L33: 2.1079 L12: 5.8208 REMARK 3 L13: -5.0339 L23: -0.0179 REMARK 3 S TENSOR REMARK 3 S11: 0.3725 S12: 0.3155 S13: -0.06 REMARK 3 S21: 0.3155 S22: -0.351 S23: 0.2265 REMARK 3 S31: -0.06 S32: 0.2265 S33: -0.0215 REMARK 3 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: {B|230 - 251} REMARK 3 ORIGIN FOR THE GROUP (A): -26.2473 19.4416 -2.5814 REMARK 3 T TENSOR REMARK 3 T11: -0.1798 T22: -0.229 REMARK 3 T33: 0.3337 T12: 0.013 REMARK 3 T13: 0.024 T23: -0.0423 REMARK 3 L TENSOR REMARK 3 L11: 3.9388 L22: 0 REMARK 3 L33: 0.4376 L12: 2.7017 REMARK 3 L13: 0.1565 L23: -0.0164 REMARK 3 S TENSOR REMARK 3 S11: -0.2174 S12: -0.1444 S13: 0.1243 REMARK 3 S21: -0.1444 S22: 0.1129 S23: -0.1502 REMARK 3 S31: 0.1243 S32: -0.1502 S33: 0.1046 REMARK 3 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: {B|252 - 257} REMARK 3 ORIGIN FOR THE GROUP (A): -10.1092 39.2825 -8.281 REMARK 3 T TENSOR REMARK 3 T11: -0.2872 T22: -0.412 REMARK 3 T33: 0.5523 T12: -0.0812 REMARK 3 T13: -0.1373 T23: 0.0918 REMARK 3 L TENSOR REMARK 3 L11: 15.3805 L22: 4.9597 REMARK 3 L33: 7.4199 L12: -4.3545 REMARK 3 L13: -5.8208 L23: -2.2662 REMARK 3 S TENSOR REMARK 3 S11: -0.2076 S12: 0.3149 S13: -0.7194 REMARK 3 S21: 0.3149 S22: 0.3907 S23: -0.2173 REMARK 3 S31: -0.7194 S32: -0.2173 S33: -0.1831 REMARK 3 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: {P|1 - 10} REMARK 3 ORIGIN FOR THE GROUP (A): -32.803 5.8248 10.3629 REMARK 3 T TENSOR REMARK 3 T11: -0.1234 T22: 0.1519 REMARK 3 T33: 0.0005 T12: -0.0713 REMARK 3 T13: 0.044 T23: 0.07 REMARK 3 L TENSOR REMARK 3 L11: 0 L22: 12.7555 REMARK 3 L33: 3.3268 L12: -5.8208 REMARK 3 L13: -1.0711 L23: 4.5766 REMARK 3 S TENSOR REMARK 3 S11: 0.0858 S12: 0.7243 S13: 0.2374 REMARK 3 S21: 0.7243 S22: 0.173 S23: -0.6446 REMARK 3 S31: 0.2374 S32: -0.6446 S33: -0.2588 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 29TJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-APR-26. REMARK 100 THE DEPOSITION ID IS D_1292155864. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-NOV-24 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.978565 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18229 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.30 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.2200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.44 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.77 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.59 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20 % W/V POLYETHYLENE GLYCOL REMARK 280 MONOMETHYL ETHER 5,000, 200 MM LITHIUM ACETATE, VAPOR DIFFUSION, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 36.14150 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 54.42450 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 36.14150 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 54.42450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1700 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11980 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, P REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY B 122 REMARK 465 THR B 123 REMARK 465 GLY B 124 REMARK 465 GLY B 125 REMARK 465 SER B 126 REMARK 465 GLY B 127 REMARK 465 GLY B 128 REMARK 465 GLY B 129 REMARK 465 GLY B 130 REMARK 465 SER B 131 REMARK 465 GLY B 132 REMARK 465 GLY B 133 REMARK 465 GLY B 134 REMARK 465 GLY B 135 REMARK 465 SER B 136 REMARK 465 GLY B 137 REMARK 465 GLY B 138 REMARK 465 ASP B 258 REMARK 465 LYS B 259 REMARK 465 ALA B 260 REMARK 465 GLY B 261 REMARK 465 TRP B 262 REMARK 465 SER B 263 REMARK 465 HIS B 264 REMARK 465 PRO B 265 REMARK 465 GLN B 266 REMARK 465 PHE B 267 REMARK 465 GLU B 268 REMARK 465 LYS B 269 REMARK 465 GLY B 270 REMARK 465 GLY B 271 REMARK 465 GLY B 272 REMARK 465 SER B 273 REMARK 465 GLY B 274 REMARK 465 GLY B 275 REMARK 465 GLY B 276 REMARK 465 SER B 277 REMARK 465 GLY B 278 REMARK 465 GLY B 279 REMARK 465 GLY B 280 REMARK 465 SER B 281 REMARK 465 TRP B 282 REMARK 465 SER B 283 REMARK 465 HIS B 284 REMARK 465 PRO B 285 REMARK 465 GLN B 286 REMARK 465 PHE B 287 REMARK 465 GLU B 288 REMARK 465 LYS B 289 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN B 55 -4.08 -146.44 REMARK 500 ASN B 102 -38.06 71.04 REMARK 500 GLN B 176 10.76 59.97 REMARK 500 GLN B 176 10.76 59.97 REMARK 500 ALA B 198 -38.30 63.81 REMARK 500 LEU B 230 98.82 -64.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI B 405 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 172 ND1 REMARK 620 2 HIS B 239 NE2 113.5 REMARK 620 3 ASP B 255 OD2 97.9 16.3 REMARK 620 4 ASP B 257 OD1 99.0 16.3 3.2 REMARK 620 5 ASP B 257 OD2 96.5 18.8 3.8 2.6 REMARK 620 N 1 2 3 4 DBREF 29TJ B 1 289 PDB 29TJ 29TJ 1 289 DBREF 29TJ P 1 10 UNP Q88932 Q88932_PRRSR 59 68 SEQRES 1 B 289 GLU VAL GLN LEU GLN GLN SER GLY PRO GLU LEU LEU LYS SEQRES 2 B 289 PRO GLY ALA SER VAL ARG MET SER CYS LYS ALA SER GLY SEQRES 3 B 289 TYR THR PHE THR ASP TYR TYR MET LYS TRP VAL LYS GLN SEQRES 4 B 289 SER HIS GLY LYS SER LEU GLU TRP ILE GLY ASP ILE ASP SEQRES 5 B 289 PRO LYS ASN GLY ASP ILE LEU TYR ASN GLN LYS PHE LYS SEQRES 6 B 289 GLY LYS ALA THR LEU THR LEU ASP LYS SER SER SER THR SEQRES 7 B 289 ALA TYR MET GLN LEU SER SER LEU THR SER GLU ASP SER SEQRES 8 B 289 ALA VAL TYR TYR CYS ALA ARG SER VAL ASP ASN TYR TYR SEQRES 9 B 289 GLU GLY PHE ALA HIS TRP GLY GLN GLY THR LEU VAL THR SEQRES 10 B 289 VAL SER PRO ALA GLY THR GLY GLY SER GLY GLY GLY GLY SEQRES 11 B 289 SER GLY GLY GLY GLY SER GLY GLY GLY ALA SER ASP ILE SEQRES 12 B 289 VAL MET THR GLN SER PRO SER SER LEU SER VAL SER ALA SEQRES 13 B 289 GLY GLU LYS VAL THR MET ARG CYS LYS SER SER GLN SER SEQRES 14 B 289 LEU ILE HIS SER GLY ASN GLN LYS ASN TYR LEU ALA TRP SEQRES 15 B 289 TYR GLN GLN LYS PRO GLY GLN PRO PRO LYS MET LEU ILE SEQRES 16 B 289 TYR GLY ALA SER THR ARG GLU SER GLY VAL PRO ASP ARG SEQRES 17 B 289 PHE THR GLY SER GLY SER GLY THR ASP PHE THR LEU THR SEQRES 18 B 289 ILE THR SER VAL GLN ALA GLU ASP LEU ALA VAL TYR TYR SEQRES 19 B 289 CYS GLN ASN ASP HIS SER TYR PRO TYR THR PHE GLY GLY SEQRES 20 B 289 GLY THR LYS LEU GLU ILE LYS ASP ASP ASP ASP LYS ALA SEQRES 21 B 289 GLY TRP SER HIS PRO GLN PHE GLU LYS GLY GLY GLY SER SEQRES 22 B 289 GLY GLY GLY SER GLY GLY GLY SER TRP SER HIS PRO GLN SEQRES 23 B 289 PHE GLU LYS SEQRES 1 P 10 ALA SER GLU ALA ILE ARG LYS ILE PRO GLN HET ACT B 401 4 HET ACT B 402 4 HET ACT B 403 4 HET ACT B 404 4 HET NI B 405 1 HETNAM ACT ACETATE ION HETNAM NI NICKEL (II) ION FORMUL 3 ACT 4(C2 H3 O2 1-) FORMUL 7 NI NI 2+ FORMUL 8 HOH *175(H2 O) HELIX 1 AA1 THR B 28 TYR B 32 5 5 HELIX 2 AA2 LYS B 74 SER B 76 5 3 HELIX 3 AA3 THR B 87 SER B 91 5 5 HELIX 4 AA4 GLN B 226 LEU B 230 5 5 HELIX 5 AA5 SER P 2 LYS P 7 1 6 SHEET 1 AA1 4 GLN B 3 GLN B 6 0 SHEET 2 AA1 4 VAL B 18 SER B 25 -1 O LYS B 23 N GLN B 5 SHEET 3 AA1 4 THR B 78 LEU B 83 -1 O LEU B 83 N VAL B 18 SHEET 4 AA1 4 ALA B 68 ASP B 73 -1 N THR B 71 O TYR B 80 SHEET 1 AA2 6 GLU B 10 LEU B 12 0 SHEET 2 AA2 6 THR B 114 VAL B 118 1 O THR B 117 N GLU B 10 SHEET 3 AA2 6 ALA B 92 ARG B 98 -1 N ALA B 92 O VAL B 116 SHEET 4 AA2 6 MET B 34 GLN B 39 -1 N VAL B 37 O TYR B 95 SHEET 5 AA2 6 LEU B 45 ILE B 51 -1 O ILE B 48 N TRP B 36 SHEET 6 AA2 6 ILE B 58 TYR B 60 -1 O LEU B 59 N ASP B 50 SHEET 1 AA3 4 GLU B 10 LEU B 12 0 SHEET 2 AA3 4 THR B 114 VAL B 118 1 O THR B 117 N GLU B 10 SHEET 3 AA3 4 ALA B 92 ARG B 98 -1 N ALA B 92 O VAL B 116 SHEET 4 AA3 4 HIS B 109 TRP B 110 -1 O HIS B 109 N ARG B 98 SHEET 1 AA4 4 MET B 145 SER B 148 0 SHEET 2 AA4 4 VAL B 160 SER B 166 -1 O ARG B 163 N SER B 148 SHEET 3 AA4 4 ASP B 217 ILE B 222 -1 O PHE B 218 N CYS B 164 SHEET 4 AA4 4 PHE B 209 SER B 214 -1 N SER B 212 O THR B 219 SHEET 1 AA5 6 SER B 151 VAL B 154 0 SHEET 2 AA5 6 THR B 249 ILE B 253 1 O GLU B 252 N VAL B 154 SHEET 3 AA5 6 VAL B 232 ASN B 237 -1 N TYR B 233 O THR B 249 SHEET 4 AA5 6 LEU B 180 GLN B 185 -1 N TYR B 183 O TYR B 234 SHEET 5 AA5 6 LYS B 192 TYR B 196 -1 O LEU B 194 N TRP B 182 SHEET 6 AA5 6 THR B 200 ARG B 201 -1 O THR B 200 N TYR B 196 SSBOND 1 CYS B 22 CYS B 96 1555 1555 2.05 SSBOND 2 CYS B 164 CYS B 235 1555 1555 2.04 LINK ND1 HIS B 172 NI NI B 405 1555 1555 2.03 LINK NE2 HIS B 239 NI NI B 405 1555 1555 2.06 LINK OD2 ASP B 255 NI NI B 405 1555 4555 2.08 LINK OD1 ASP B 257 NI NI B 405 1555 4555 2.75 LINK OD2 ASP B 257 NI NI B 405 1555 4555 2.21 CISPEP 1 SER B 148 PRO B 149 0 -5.96 CISPEP 2 TYR B 241 PRO B 242 0 -2.75 CRYST1 72.283 108.849 50.156 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013835 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009187 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019938 0.00000 CONECT 162 753 CONECT 753 162 CONECT 1126 1674 CONECT 1185 1946 CONECT 1674 1126 CONECT 1709 1946 CONECT 1930 1931 1932 1933 CONECT 1931 1930 CONECT 1932 1930 CONECT 1933 1930 CONECT 1934 1935 1936 1937 CONECT 1935 1934 CONECT 1936 1934 CONECT 1937 1934 CONECT 1938 1939 1940 1941 CONECT 1939 1938 CONECT 1940 1938 CONECT 1941 1938 CONECT 1942 1943 1944 1945 CONECT 1943 1942 CONECT 1944 1942 CONECT 1945 1942 CONECT 1946 1185 1709 MASTER 646 0 5 5 24 0 0 6 2118 2 23 24 END