HEADER VIRAL PROTEIN 03-MAR-26 29AG TITLE CRYSTAL STRUCTURE OF THE NOROVIRUS GII.17 P DOMAIN IN COMPLEX WITH TITLE 2 LACTO-N-FUCOPENTAOSE I (LNFP I) COMPND MOL_ID: 1; COMPND 2 MOLECULE: VP1; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: NOROVIRUS P DOMAIN FROM GII.17 STRAIN RESIDUES 224-530 COMPND 6 GENBANK: PQ336944.1 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NOROVIRUS GII.17; SOURCE 3 ORGANISM_TAXID: 552592; SOURCE 4 STRAIN: GII.17; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PBADM41 KEYWDS VIRAL LECTIN DOMAIN, HMOS, NOROVIRUS, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR L.PISAPIA,A.VARROT REVDAT 1 11-NOV-26 29AG 0 JRNL AUTH L.PISAPIA,H.N.FLATAU,S.LIN,N.KHANZHIN,A.IMBERTY,M.FRAGAI, JRNL AUTH 2 J.ANGULO,A.VARROT JRNL TITL CRYSTAL STRUCTURE OF THE NOROVIRUS GII.17 P DOMAIN IN JRNL TITL 2 COMPLEX WITH LACTO-N-FUCOPENTAOSE I (LNFP I) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.71 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0430 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.71 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.40 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.6 REMARK 3 NUMBER OF REFLECTIONS : 64465 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.202 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.938 REMARK 3 FREE R VALUE TEST SET COUNT : 3183 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.71 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.76 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2709 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 57.81 REMARK 3 BIN R VALUE (WORKING SET) : 0.2900 REMARK 3 BIN FREE R VALUE SET COUNT : 148 REMARK 3 BIN FREE R VALUE : 0.3080 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4766 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 94 REMARK 3 SOLVENT ATOMS : 912 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.77 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.71900 REMARK 3 B22 (A**2) : -1.18700 REMARK 3 B33 (A**2) : 1.79100 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.32200 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.115 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.110 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.080 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.520 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.951 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5059 ; 0.008 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 4535 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6940 ; 1.551 ; 1.796 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10489 ; 0.573 ; 1.730 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 622 ; 7.510 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 28 ; 9.765 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 727 ;11.049 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 769 ; 0.083 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6072 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1208 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 878 ; 0.195 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 51 ; 0.168 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2459 ; 0.180 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 761 ; 0.144 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): 2 ; 0.052 ; 0.200 REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2473 ; 1.657 ; 1.881 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2473 ; 1.657 ; 1.881 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3100 ; 2.449 ; 3.375 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3101 ; 2.449 ; 3.375 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2586 ; 2.386 ; 2.132 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2587 ; 2.386 ; 2.132 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 3840 ; 3.623 ; 3.820 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3841 ; 3.623 ; 3.820 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 29AG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 03-MAR-26. REMARK 100 THE DEPOSITION ID IS D_1292154885. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-OCT-25 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97856 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.8.2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 64492 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.710 REMARK 200 RESOLUTION RANGE LOW (A) : 47.395 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.6 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.05200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.71 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 47.4 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.52400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.3 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: SQUARE/RECTANGULAR PLATE-SHAPED CRYSTALS REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.61 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M MG SULFATE, 16% PEG3350, 0.1 M REMARK 280 TRIS PH 8.5 CRYO: 30% PEG3350. 20MM LIGAND, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 42.75600 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5380 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24610 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 221 REMARK 465 ALA A 222 REMARK 465 MET A 223 REMARK 465 GLY B 221 REMARK 465 ALA B 222 REMARK 465 MET B 223 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU B 469 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 338 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 260 47.09 -150.30 REMARK 500 ALA A 344 58.57 39.19 REMARK 500 SER A 439 46.26 -97.34 REMARK 500 VAL B 259 128.28 -34.74 REMARK 500 GLN B 260 48.63 -146.67 REMARK 500 ALA B 344 59.92 39.28 REMARK 500 ASP B 393 79.25 -108.86 REMARK 500 SER B 439 50.69 -98.69 REMARK 500 ASP B 516 -63.82 -103.01 REMARK 500 VAL B 519 -143.38 -117.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 289 0.08 SIDE CHAIN REMARK 500 ARG A 433 0.10 SIDE CHAIN REMARK 500 ARG B 289 0.10 SIDE CHAIN REMARK 500 ARG B 474 0.10 SIDE CHAIN REMARK 500 ARG B 491 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1034 DISTANCE = 5.95 ANGSTROMS REMARK 525 HOH A1036 DISTANCE = 6.04 ANGSTROMS REMARK 525 HOH A1037 DISTANCE = 6.16 ANGSTROMS REMARK 525 HOH A1038 DISTANCE = 6.21 ANGSTROMS REMARK 525 HOH A1040 DISTANCE = 6.48 ANGSTROMS REMARK 525 HOH A1041 DISTANCE = 6.60 ANGSTROMS REMARK 525 HOH B1062 DISTANCE = 5.84 ANGSTROMS REMARK 525 HOH B1063 DISTANCE = 5.96 ANGSTROMS REMARK 525 HOH B1064 DISTANCE = 6.06 ANGSTROMS REMARK 525 HOH B1065 DISTANCE = 6.20 ANGSTROMS REMARK 525 HOH B1066 DISTANCE = 6.24 ANGSTROMS REMARK 525 HOH B1067 DISTANCE = 6.68 ANGSTROMS DBREF1 29AG A 225 528 UNP A0A1C9M2L7_NORV DBREF2 29AG A A0A1C9M2L7 225 528 DBREF1 29AG B 225 528 UNP A0A1C9M2L7_NORV DBREF2 29AG B A0A1C9M2L7 225 528 SEQADV 29AG GLY A 221 UNP A0A1C9M2L EXPRESSION TAG SEQADV 29AG ALA A 222 UNP A0A1C9M2L EXPRESSION TAG SEQADV 29AG MET A 223 UNP A0A1C9M2L EXPRESSION TAG SEQADV 29AG ALA A 224 UNP A0A1C9M2L EXPRESSION TAG SEQADV 29AG MET A 334 UNP A0A1C9M2L VAL 334 CONFLICT SEQADV 29AG SER A 350 UNP A0A1C9M2L ALA 350 CONFLICT SEQADV 29AG ARG A 361 UNP A0A1C9M2L LYS 361 CONFLICT SEQADV 29AG LYS A 372 UNP A0A1C9M2L ARG 372 CONFLICT SEQADV 29AG GLN A 396 UNP A0A1C9M2L HIS 396 CONFLICT SEQADV 29AG PHE A 431 UNP A0A1C9M2L LEU 431 CONFLICT SEQADV 29AG SER A 435 UNP A0A1C9M2L PHE 435 CONFLICT SEQADV 29AG GLU A 469 UNP A0A1C9M2L ASP 469 CONFLICT SEQADV 29AG GLY B 221 UNP A0A1C9M2L EXPRESSION TAG SEQADV 29AG ALA B 222 UNP A0A1C9M2L EXPRESSION TAG SEQADV 29AG MET B 223 UNP A0A1C9M2L EXPRESSION TAG SEQADV 29AG ALA B 224 UNP A0A1C9M2L EXPRESSION TAG SEQADV 29AG MET B 334 UNP A0A1C9M2L VAL 334 CONFLICT SEQADV 29AG SER B 350 UNP A0A1C9M2L ALA 350 CONFLICT SEQADV 29AG ARG B 361 UNP A0A1C9M2L LYS 361 CONFLICT SEQADV 29AG LYS B 372 UNP A0A1C9M2L ARG 372 CONFLICT SEQADV 29AG GLN B 396 UNP A0A1C9M2L HIS 396 CONFLICT SEQADV 29AG PHE B 431 UNP A0A1C9M2L LEU 431 CONFLICT SEQADV 29AG SER B 435 UNP A0A1C9M2L PHE 435 CONFLICT SEQADV 29AG GLU B 469 UNP A0A1C9M2L ASP 469 CONFLICT SEQRES 1 A 308 GLY ALA MET ALA LYS PRO PHE SER LEU PRO ILE LEU THR SEQRES 2 A 308 LEU SER GLU LEU THR ASN SER ARG PHE PRO VAL PRO ILE SEQRES 3 A 308 ASP SER LEU PHE THR ALA GLN ASN ASN VAL LEU GLN VAL SEQRES 4 A 308 GLN CYS GLN ASN GLY ARG CYS THR LEU ASP GLY GLU LEU SEQRES 5 A 308 GLN GLY THR THR GLN LEU LEU PRO SER GLY ILE CYS ALA SEQRES 6 A 308 PHE ARG GLY ARG VAL THR ALA GLU THR ASP ASN PRO ASP SEQRES 7 A 308 LYS TRP HIS MET GLN LEU GLN ASN LEU ASN GLY THR THR SEQRES 8 A 308 TYR ASP PRO THR ASP ASP VAL PRO ALA PRO LEU GLY THR SEQRES 9 A 308 PRO ASP PHE LYS GLY VAL VAL PHE GLY MET ALA SER GLN SEQRES 10 A 308 ARG ASN VAL GLY ASN ASP ALA PRO GLY SER THR ARG SER SEQRES 11 A 308 HIS GLU ALA VAL ILE SER THR TYR SER PRO ARG PHE VAL SEQRES 12 A 308 PRO LYS LEU GLY SER VAL ASN PHE LYS SER ASN ASP ASP SEQRES 13 A 308 ASP PHE GLN LEU GLN PRO THR ARG PHE THR PRO VAL GLY SEQRES 14 A 308 ILE ASN ASP ASP GLY ASN GLN PRO PHE ARG GLN TRP GLU SEQRES 15 A 308 LEU PRO ASP TYR SER GLY VAL LEU THR LEU ASN MET ASN SEQRES 16 A 308 LEU ALA PRO PRO VAL ALA PRO ASN PHE PRO GLY GLU GLN SEQRES 17 A 308 LEU LEU PHE PHE ARG SER SER VAL PRO CYS SER GLY GLY SEQRES 18 A 308 TYR ASN GLN GLY ILE ILE ASP CYS LEU ILE PRO GLN GLU SEQRES 19 A 308 TRP ILE GLN HIS PHE TYR GLN GLU SER ALA PRO SER GLN SEQRES 20 A 308 SER GLU VAL ALA LEU ILE ARG TYR VAL ASN PRO ASP THR SEQRES 21 A 308 GLY ARG THR LEU PHE GLU ALA LYS LEU HIS ARG SER GLY SEQRES 22 A 308 TYR ILE THR VAL ALA HIS SER GLY ASP TYR PRO LEU VAL SEQRES 23 A 308 VAL PRO ALA ASN GLY TYR PHE ARG PHE ASP SER TRP VAL SEQRES 24 A 308 ASN GLN PHE TYR SER LEU ALA PRO MET SEQRES 1 B 308 GLY ALA MET ALA LYS PRO PHE SER LEU PRO ILE LEU THR SEQRES 2 B 308 LEU SER GLU LEU THR ASN SER ARG PHE PRO VAL PRO ILE SEQRES 3 B 308 ASP SER LEU PHE THR ALA GLN ASN ASN VAL LEU GLN VAL SEQRES 4 B 308 GLN CYS GLN ASN GLY ARG CYS THR LEU ASP GLY GLU LEU SEQRES 5 B 308 GLN GLY THR THR GLN LEU LEU PRO SER GLY ILE CYS ALA SEQRES 6 B 308 PHE ARG GLY ARG VAL THR ALA GLU THR ASP ASN PRO ASP SEQRES 7 B 308 LYS TRP HIS MET GLN LEU GLN ASN LEU ASN GLY THR THR SEQRES 8 B 308 TYR ASP PRO THR ASP ASP VAL PRO ALA PRO LEU GLY THR SEQRES 9 B 308 PRO ASP PHE LYS GLY VAL VAL PHE GLY MET ALA SER GLN SEQRES 10 B 308 ARG ASN VAL GLY ASN ASP ALA PRO GLY SER THR ARG SER SEQRES 11 B 308 HIS GLU ALA VAL ILE SER THR TYR SER PRO ARG PHE VAL SEQRES 12 B 308 PRO LYS LEU GLY SER VAL ASN PHE LYS SER ASN ASP ASP SEQRES 13 B 308 ASP PHE GLN LEU GLN PRO THR ARG PHE THR PRO VAL GLY SEQRES 14 B 308 ILE ASN ASP ASP GLY ASN GLN PRO PHE ARG GLN TRP GLU SEQRES 15 B 308 LEU PRO ASP TYR SER GLY VAL LEU THR LEU ASN MET ASN SEQRES 16 B 308 LEU ALA PRO PRO VAL ALA PRO ASN PHE PRO GLY GLU GLN SEQRES 17 B 308 LEU LEU PHE PHE ARG SER SER VAL PRO CYS SER GLY GLY SEQRES 18 B 308 TYR ASN GLN GLY ILE ILE ASP CYS LEU ILE PRO GLN GLU SEQRES 19 B 308 TRP ILE GLN HIS PHE TYR GLN GLU SER ALA PRO SER GLN SEQRES 20 B 308 SER GLU VAL ALA LEU ILE ARG TYR VAL ASN PRO ASP THR SEQRES 21 B 308 GLY ARG THR LEU PHE GLU ALA LYS LEU HIS ARG SER GLY SEQRES 22 B 308 TYR ILE THR VAL ALA HIS SER GLY ASP TYR PRO LEU VAL SEQRES 23 B 308 VAL PRO ALA ASN GLY TYR PHE ARG PHE ASP SER TRP VAL SEQRES 24 B 308 ASN GLN PHE TYR SER LEU ALA PRO MET HET GAL C 1 12 HET NAG C 2 14 HET GAL C 3 11 HET FUC C 4 10 HET GAL D 1 12 HET NAG D 2 14 HET GAL D 3 11 HET FUC D 4 10 HETNAM GAL BETA-D-GALACTOPYRANOSE HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETSYN GAL BETA-D-GALACTOSE; D-GALACTOSE; GALACTOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE FORMUL 3 GAL 4(C6 H12 O6) FORMUL 3 NAG 2(C8 H15 N O6) FORMUL 3 FUC 2(C6 H12 O5) FORMUL 5 HOH *912(H2 O) HELIX 1 AA1 THR A 233 LEU A 237 5 5 HELIX 2 AA2 LEU A 279 ILE A 283 5 5 HELIX 3 AA3 PRO A 452 SER A 463 1 12 HELIX 4 AA4 THR B 233 LEU B 237 5 5 HELIX 5 AA5 LEU B 279 ILE B 283 5 5 HELIX 6 AA6 PRO B 452 SER B 463 1 12 SHEET 1 AA1 4 ILE A 446 CYS A 449 0 SHEET 2 AA1 4 GLU A 427 SER A 435 -1 N SER A 434 O ILE A 447 SHEET 3 AA1 4 SER A 248 THR A 251 -1 N PHE A 250 O PHE A 431 SHEET 4 AA1 4 TYR A 503 PRO A 504 -1 O TYR A 503 N THR A 251 SHEET 1 AA2 6 ILE A 446 CYS A 449 0 SHEET 2 AA2 6 GLU A 427 SER A 435 -1 N SER A 434 O ILE A 447 SHEET 3 AA2 6 TYR A 494 ALA A 498 -1 O VAL A 497 N GLN A 428 SHEET 4 AA2 6 ARG A 482 HIS A 490 -1 N HIS A 490 O TYR A 494 SHEET 5 AA2 6 VAL A 470 ASN A 477 -1 N ALA A 471 O LEU A 489 SHEET 6 AA2 6 TYR A 512 VAL A 519 -1 O SER A 517 N LEU A 472 SHEET 1 AA3 6 THR A 348 SER A 356 0 SHEET 2 AA3 6 VAL A 330 ARG A 338 -1 N GLN A 337 O ARG A 349 SHEET 3 AA3 6 PRO A 382 ASN A 391 -1 O VAL A 388 N PHE A 332 SHEET 4 AA3 6 PHE A 286 GLU A 293 -1 N PHE A 286 O PHE A 385 SHEET 5 AA3 6 TRP A 300 GLN A 305 -1 O GLN A 305 N ARG A 287 SHEET 6 AA3 6 SER A 368 PHE A 371 -1 O VAL A 369 N MET A 302 SHEET 1 AA4 4 ILE B 446 CYS B 449 0 SHEET 2 AA4 4 GLU B 427 SER B 435 -1 N SER B 434 O ILE B 447 SHEET 3 AA4 4 SER B 248 THR B 251 -1 N PHE B 250 O PHE B 431 SHEET 4 AA4 4 TYR B 503 PRO B 504 -1 O TYR B 503 N THR B 251 SHEET 1 AA5 6 ILE B 446 CYS B 449 0 SHEET 2 AA5 6 GLU B 427 SER B 435 -1 N SER B 434 O ILE B 447 SHEET 3 AA5 6 TYR B 494 ALA B 498 -1 O VAL B 497 N GLN B 428 SHEET 4 AA5 6 THR B 483 HIS B 490 -1 N HIS B 490 O TYR B 494 SHEET 5 AA5 6 VAL B 470 VAL B 476 -1 N TYR B 475 O LEU B 484 SHEET 6 AA5 6 TYR B 512 TRP B 518 -1 O SER B 517 N LEU B 472 SHEET 1 AA6 6 THR B 348 SER B 356 0 SHEET 2 AA6 6 VAL B 330 ARG B 338 -1 N GLN B 337 O ARG B 349 SHEET 3 AA6 6 PRO B 382 ASN B 391 -1 O VAL B 388 N PHE B 332 SHEET 4 AA6 6 PHE B 286 GLU B 293 -1 N PHE B 286 O PHE B 385 SHEET 5 AA6 6 TRP B 300 GLN B 305 -1 O GLN B 305 N ARG B 287 SHEET 6 AA6 6 SER B 368 PHE B 371 -1 O VAL B 369 N MET B 302 LINK O3 GAL C 1 C1 NAG C 2 1555 1555 1.40 LINK O3 NAG C 2 C1 GAL C 3 1555 1555 1.39 LINK O2 GAL C 3 C1 FUC C 4 1555 1555 1.39 LINK O3 GAL D 1 C1 NAG D 2 1555 1555 1.40 LINK O3 NAG D 2 C1 GAL D 3 1555 1555 1.38 LINK O2 GAL D 3 C1 FUC D 4 1555 1555 1.39 CRYST1 59.225 85.512 65.623 90.00 106.23 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016885 0.000000 0.004916 0.00000 SCALE2 0.000000 0.011694 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015871 0.00000 CONECT 4817 4818 4823 4827 CONECT 4818 4817 4819 4824 CONECT 4819 4818 4820 4825 CONECT 4820 4819 4821 4826 CONECT 4821 4820 4822 4827 CONECT 4822 4821 4828 CONECT 4823 4817 CONECT 4824 4818 CONECT 4825 4819 4829 CONECT 4826 4820 CONECT 4827 4817 4821 CONECT 4828 4822 CONECT 4829 4825 4830 4840 CONECT 4830 4829 4831 4837 CONECT 4831 4830 4832 4838 CONECT 4832 4831 4833 4839 CONECT 4833 4832 4834 4840 CONECT 4834 4833 4841 CONECT 4835 4836 4837 4842 CONECT 4836 4835 CONECT 4837 4830 4835 CONECT 4838 4831 4843 CONECT 4839 4832 CONECT 4840 4829 4833 CONECT 4841 4834 CONECT 4842 4835 CONECT 4843 4838 4844 4852 CONECT 4844 4843 4845 4849 CONECT 4845 4844 4846 4850 CONECT 4846 4845 4847 4851 CONECT 4847 4846 4848 4852 CONECT 4848 4847 4853 CONECT 4849 4844 4854 CONECT 4850 4845 CONECT 4851 4846 CONECT 4852 4843 4847 CONECT 4853 4848 CONECT 4854 4849 4855 4863 CONECT 4855 4854 4856 4860 CONECT 4856 4855 4857 4861 CONECT 4857 4856 4858 4862 CONECT 4858 4857 4859 4863 CONECT 4859 4858 CONECT 4860 4855 CONECT 4861 4856 CONECT 4862 4857 CONECT 4863 4854 4858 CONECT 4864 4865 4870 4874 CONECT 4865 4864 4866 4871 CONECT 4866 4865 4867 4872 CONECT 4867 4866 4868 4873 CONECT 4868 4867 4869 4874 CONECT 4869 4868 4875 CONECT 4870 4864 CONECT 4871 4865 CONECT 4872 4866 4876 CONECT 4873 4867 CONECT 4874 4864 4868 CONECT 4875 4869 CONECT 4876 4872 4877 4887 CONECT 4877 4876 4878 4884 CONECT 4878 4877 4879 4885 CONECT 4879 4878 4880 4886 CONECT 4880 4879 4881 4887 CONECT 4881 4880 4888 CONECT 4882 4883 4884 4889 CONECT 4883 4882 CONECT 4884 4877 4882 CONECT 4885 4878 4890 CONECT 4886 4879 CONECT 4887 4876 4880 CONECT 4888 4881 CONECT 4889 4882 CONECT 4890 4885 4891 4899 CONECT 4891 4890 4892 4896 CONECT 4892 4891 4893 4897 CONECT 4893 4892 4894 4898 CONECT 4894 4893 4895 4899 CONECT 4895 4894 4900 CONECT 4896 4891 4901 CONECT 4897 4892 CONECT 4898 4893 CONECT 4899 4890 4894 CONECT 4900 4895 CONECT 4901 4896 4902 4910 CONECT 4902 4901 4903 4907 CONECT 4903 4902 4904 4908 CONECT 4904 4903 4905 4909 CONECT 4905 4904 4906 4910 CONECT 4906 4905 CONECT 4907 4902 CONECT 4908 4903 CONECT 4909 4904 CONECT 4910 4901 4905 MASTER 342 0 8 6 32 0 0 6 5772 2 94 48 END