HEADER SIGNALING PROTEIN 18-MAR-26 29KL TITLE CRYSTAL STRUCTURE OF HUMAN CATENIN BETA-1 IN COMPLEX WITH CYCLIC BETA TITLE 2 SHEET PEPTIDE INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: CATENIN BETA-1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: BETA-CATENIN; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: CYCLIC KILO N4V; COMPND 8 CHAIN: B; COMPND 9 ENGINEERED: YES; COMPND 10 OTHER_DETAILS: CADHERIN-1 MIMETIC *** SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CTNNB1, CTNNB, OK/SW-CL.35, PRO2286; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_TAXID: 9606 KEYWDS PEPTIDOMETIC INHIBITOR OF CATENIN BETA-1, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.I.R.KLINTROT,F.J.STEINER,T.N.GROSSMANN,S.HENNIG REVDAT 1 23-SEP-26 29KL 0 JRNL AUTH C.I.R.KLINTROT,S.HENNIG,T.N.GROSSMANN JRNL TITL TO BE DECIDED PLEASE JRNL REF TO BE PUBLISHED 2026 JRNL REFN JRNL DOI 10.1002/CEUR.70357 REMARK 2 REMARK 2 RESOLUTION. 2.09 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0431 (REFMACAT 0.4.142) REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.09 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 54.37 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 86.1 REMARK 3 NUMBER OF REFLECTIONS : 31893 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.042 REMARK 3 FREE R VALUE TEST SET COUNT : 1608 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.09 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.15 REMARK 3 REFLECTION IN BIN (WORKING SET) : 89 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 3.73 REMARK 3 BIN R VALUE (WORKING SET) : 0.2540 REMARK 3 BIN FREE R VALUE SET COUNT : 11 REMARK 3 BIN FREE R VALUE : 0.2360 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3985 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 86 REMARK 3 SOLVENT ATOMS : 159 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 60.23 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.86400 REMARK 3 B22 (A**2) : 0.26300 REMARK 3 B33 (A**2) : 0.60100 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.237 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.182 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.154 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.580 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.964 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4126 ; 0.002 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 4097 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5605 ; 0.763 ; 1.830 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9415 ; 0.301 ; 1.745 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 517 ; 4.753 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 31 ; 2.059 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 721 ;10.499 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 704 ; 0.037 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4756 ; 0.002 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 874 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1012 ; 0.193 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 82 ; 0.099 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2074 ; 0.161 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 160 ; 0.112 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2084 ; 3.598 ; 4.690 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2083 ; 3.592 ; 4.688 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2602 ; 5.135 ; 8.426 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2600 ; 5.126 ; 8.423 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2042 ; 4.807 ; 5.511 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2043 ; 4.806 ; 5.512 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 3003 ; 7.495 ; 9.844 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3004 ; 7.494 ; 9.844 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : Ap 151 Ap 749 REMARK 3 ORIGIN FOR THE GROUP (A): 20.034 3.4962 26.5937 REMARK 3 T TENSOR REMARK 3 T11: 0.0976 T22: 0.0634 REMARK 3 T33: 0.0436 T12: 0.0168 REMARK 3 T13: 0.0485 T23: -0.018 REMARK 3 L TENSOR REMARK 3 L11: 0.3928 L22: 0.7589 REMARK 3 L33: 0.6791 L12: -0.4254 REMARK 3 L13: -0.2655 L23: 0.6653 REMARK 3 S TENSOR REMARK 3 S11: -0.0315 S12: 0.0415 S13: -0.0458 REMARK 3 S21: 0.0277 S22: 0.022 S23: 0.0587 REMARK 3 S31: 0.0114 S32: 0.0952 S33: 0.0095 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : Bp 1 Bp 16 REMARK 3 ORIGIN FOR THE GROUP (A): 20.7574 8.3026 35.8871 REMARK 3 T TENSOR REMARK 3 T11: 0.126 T22: 0.1967 REMARK 3 T33: 0.0602 T12: 0.0373 REMARK 3 T13: 0.0067 T23: -0.1011 REMARK 3 L TENSOR REMARK 3 L11: 1.0173 L22: 6.4877 REMARK 3 L33: 1.2777 L12: 0.1747 REMARK 3 L13: -0.9915 L23: 0.3419 REMARK 3 S TENSOR REMARK 3 S11: -0.1982 S12: -0.0869 S13: -0.0223 REMARK 3 S21: -0.0245 S22: 0.3212 S23: -0.2873 REMARK 3 S31: 0.1901 S32: 0.3252 S33: -0.123 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.90 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 29KL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 06-JUL-26. REMARK 100 THE DEPOSITION ID IS D_1292149258. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-APR-25 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.25 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2.MULTIPLEX REMARK 200 DATA SCALING SOFTWARE : STARANISO REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31898 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.090 REMARK 200 RESOLUTION RANGE LOW (A) : 54.370 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.2 REMARK 200 DATA REDUNDANCY : 54.60 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.09 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.23 REMARK 200 COMPLETENESS FOR SHELL (%) : 45.5 REMARK 200 DATA REDUNDANCY IN SHELL : 57.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM TRIS PH 8.25 0-10 %(W/V) PEG REMARK 280 -3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 93.76600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 93.76600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 31.93450 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 51.79200 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 31.93450 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 51.79200 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 93.76600 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 31.93450 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 51.79200 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 93.76600 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 31.93450 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 51.79200 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CL CL A 708 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 BAL B 16 C - N - CA ANGL. DEV. = 34.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 488 30.53 -98.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 BAL B 1 VAL B 2 110.97 REMARK 500 PHE B 15 BAL B 16 -132.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 709 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ARG A 386 O REMARK 620 2 ASN A 387 O 74.6 REMARK 620 3 ASP A 390 OD1 126.3 62.7 REMARK 620 N 1 2 DBREF 29KL A 151 665 UNP P35222 CTNB1_HUMAN 151 665 DBREF 29KL B 1 16 PDB 29KL 29KL 1 16 SEQADV 29KL A UNP P35222 THR 551 DELETION SEQADV 29KL A UNP P35222 SER 552 DELETION SEQADV 29KL A UNP P35222 MET 553 DELETION SEQADV 29KL A UNP P35222 GLY 554 DELETION SEQADV 29KL A UNP P35222 GLY 555 DELETION SEQADV 29KL A UNP P35222 THR 556 DELETION SEQADV 29KL A UNP P35222 GLN 557 DELETION SEQADV 29KL A UNP P35222 GLN 558 DELETION SEQADV 29KL A UNP P35222 GLN 559 DELETION SEQRES 1 A 506 ARG ALA ILE PRO GLU LEU THR LYS LEU LEU ASN ASP GLU SEQRES 2 A 506 ASP GLN VAL VAL VAL ASN LYS ALA ALA VAL MET VAL HIS SEQRES 3 A 506 GLN LEU SER LYS LYS GLU ALA SER ARG HIS ALA ILE MET SEQRES 4 A 506 ARG SER PRO GLN MET VAL SER ALA ILE VAL ARG THR MET SEQRES 5 A 506 GLN ASN THR ASN ASP VAL GLU THR ALA ARG CYS THR ALA SEQRES 6 A 506 GLY THR LEU HIS ASN LEU SER HIS HIS ARG GLU GLY LEU SEQRES 7 A 506 LEU ALA ILE PHE LYS SER GLY GLY ILE PRO ALA LEU VAL SEQRES 8 A 506 LYS MET LEU GLY SER PRO VAL ASP SER VAL LEU PHE TYR SEQRES 9 A 506 ALA ILE THR THR LEU HIS ASN LEU LEU LEU HIS GLN GLU SEQRES 10 A 506 GLY ALA LYS MET ALA VAL ARG LEU ALA GLY GLY LEU GLN SEQRES 11 A 506 LYS MET VAL ALA LEU LEU ASN LYS THR ASN VAL LYS PHE SEQRES 12 A 506 LEU ALA ILE THR THR ASP CYS LEU GLN ILE LEU ALA TYR SEQRES 13 A 506 GLY ASN GLN GLU SER LYS LEU ILE ILE LEU ALA SER GLY SEQRES 14 A 506 GLY PRO GLN ALA LEU VAL ASN ILE MET ARG THR TYR THR SEQRES 15 A 506 TYR GLU LYS LEU LEU TRP THR THR SER ARG VAL LEU LYS SEQRES 16 A 506 VAL LEU SER VAL CYS SER SER ASN LYS PRO ALA ILE VAL SEQRES 17 A 506 GLU ALA GLY GLY MET GLN ALA LEU GLY LEU HIS LEU THR SEQRES 18 A 506 ASP PRO SER GLN ARG LEU VAL GLN ASN CYS LEU TRP THR SEQRES 19 A 506 LEU ARG ASN LEU SER ASP ALA ALA THR LYS GLN GLU GLY SEQRES 20 A 506 MET GLU GLY LEU LEU GLY THR LEU VAL GLN LEU LEU GLY SEQRES 21 A 506 SER ASP ASP ILE ASN VAL VAL THR CYS ALA ALA GLY ILE SEQRES 22 A 506 LEU SER ASN LEU THR CYS ASN ASN TYR LYS ASN LYS MET SEQRES 23 A 506 MET VAL CYS GLN VAL GLY GLY ILE GLU ALA LEU VAL ARG SEQRES 24 A 506 THR VAL LEU ARG ALA GLY ASP ARG GLU ASP ILE THR GLU SEQRES 25 A 506 PRO ALA ILE CYS ALA LEU ARG HIS LEU THR SER ARG HIS SEQRES 26 A 506 GLN GLU ALA GLU MET ALA GLN ASN ALA VAL ARG LEU HIS SEQRES 27 A 506 TYR GLY LEU PRO VAL VAL VAL LYS LEU LEU HIS PRO PRO SEQRES 28 A 506 SER HIS TRP PRO LEU ILE LYS ALA THR VAL GLY LEU ILE SEQRES 29 A 506 ARG ASN LEU ALA LEU CYS PRO ALA ASN HIS ALA PRO LEU SEQRES 30 A 506 ARG GLU GLN GLY ALA ILE PRO ARG LEU VAL GLN LEU LEU SEQRES 31 A 506 VAL ARG ALA HIS GLN ASP THR GLN ARG ARG PHE VAL GLU SEQRES 32 A 506 GLY VAL ARG MET GLU GLU ILE VAL GLU GLY CYS THR GLY SEQRES 33 A 506 ALA LEU HIS ILE LEU ALA ARG ASP VAL HIS ASN ARG ILE SEQRES 34 A 506 VAL ILE ARG GLY LEU ASN THR ILE PRO LEU PHE VAL GLN SEQRES 35 A 506 LEU LEU TYR SER PRO ILE GLU ASN ILE GLN ARG VAL ALA SEQRES 36 A 506 ALA GLY VAL LEU CYS GLU LEU ALA GLN ASP LYS GLU ALA SEQRES 37 A 506 ALA GLU ALA ILE GLU ALA GLU GLY ALA THR ALA PRO LEU SEQRES 38 A 506 THR GLU LEU LEU HIS SER ARG ASN GLU GLY VAL ALA THR SEQRES 39 A 506 TYR ALA ALA ALA VAL LEU PHE ARG MET SER GLU ASP SEQRES 1 B 16 BAL VAL THR ARG VAL ASP VAL DPR PRO ASP SER LEU LEU SEQRES 2 B 16 VAL PHE BAL HET BAL B 1 5 HET DPR B 8 7 HET BAL B 16 5 HET GLC A 701 12 HET GLC A 702 12 HET GLC A 703 12 HET GLC A 704 12 HET GLC A 705 12 HET GLC A 706 12 HET GLC A 707 12 HET CL A 708 1 HET NA A 709 1 HETNAM BAL BETA-ALANINE HETNAM DPR D-PROLINE HETNAM GLC ALPHA-D-GLUCOPYRANOSE HETNAM CL CHLORIDE ION HETNAM NA SODIUM ION HETSYN GLC ALPHA-D-GLUCOSE; D-GLUCOSE; GLUCOSE FORMUL 2 BAL 2(C3 H7 N O2) FORMUL 2 DPR C5 H9 N O2 FORMUL 3 GLC 7(C6 H12 O6) FORMUL 10 CL CL 1- FORMUL 11 NA NA 1+ FORMUL 12 HOH *159(H2 O) HELIX 1 AA1 ALA A 152 ASN A 161 1 10 HELIX 2 AA2 ASP A 164 SER A 179 1 16 HELIX 3 AA3 LYS A 181 ARG A 190 1 10 HELIX 4 AA4 SER A 191 ASN A 204 1 14 HELIX 5 AA5 ASP A 207 SER A 222 1 16 HELIX 6 AA6 HIS A 224 LYS A 233 1 10 HELIX 7 AA7 GLY A 235 LEU A 244 1 10 HELIX 8 AA8 VAL A 248 GLN A 266 1 19 HELIX 9 AA9 GLY A 268 ALA A 276 1 9 HELIX 10 AB1 GLY A 277 LEU A 285 1 9 HELIX 11 AB2 LEU A 286 LYS A 288 5 3 HELIX 12 AB3 ASN A 290 TYR A 306 1 17 HELIX 13 AB4 ASN A 308 SER A 318 1 11 HELIX 14 AB5 GLY A 319 TYR A 331 1 13 HELIX 15 AB6 TYR A 333 VAL A 349 1 17 HELIX 16 AB7 SER A 352 ALA A 360 1 9 HELIX 17 AB8 GLY A 361 LEU A 368 1 8 HELIX 18 AB9 SER A 374 SER A 389 1 16 HELIX 19 AC1 ASP A 390 ALA A 392 5 3 HELIX 20 AC2 MET A 398 LEU A 409 1 12 HELIX 21 AC3 ASP A 413 THR A 428 1 16 HELIX 22 AC4 ASN A 431 VAL A 441 1 11 HELIX 23 AC5 GLY A 442 GLY A 455 1 14 HELIX 24 AC6 ARG A 457 LEU A 471 1 15 HELIX 25 AC7 GLU A 477 HIS A 488 1 12 HELIX 26 AC8 GLY A 490 LEU A 497 1 8 HELIX 27 AC9 HIS A 503 ALA A 518 1 16 HELIX 28 AD1 LEU A 519 ALA A 522 5 4 HELIX 29 AD2 ASN A 523 GLN A 530 1 8 HELIX 30 AD3 GLY A 531 ARG A 550 1 20 HELIX 31 AD4 ARG A 565 ALA A 581 1 17 HELIX 32 AD5 ASP A 583 LEU A 593 1 11 HELIX 33 AD6 THR A 595 LEU A 602 1 8 HELIX 34 AD7 LEU A 603 SER A 605 5 3 HELIX 35 AD8 ILE A 607 ALA A 622 1 16 HELIX 36 AD9 ASP A 624 GLU A 634 1 11 HELIX 37 AE1 ALA A 636 LEU A 644 1 9 HELIX 38 AE2 ASN A 648 GLU A 664 1 17 SHEET 1 AA1 2 VAL B 2 VAL B 7 0 SHEET 2 AA1 2 ASP B 10 PHE B 15 -1 O VAL B 14 N THR B 3 LINK C BAL B 1 N VAL B 2 1555 1555 1.34 LINK N BAL B 1 C BAL B 16 1555 1555 1.34 LINK C VAL B 7 N DPR B 8 1555 1555 1.36 LINK C DPR B 8 N PRO B 9 1555 1555 1.36 LINK C PHE B 15 N BAL B 16 1555 1555 1.33 LINK O ARG A 386 NA NA A 709 1555 1555 2.62 LINK O ASN A 387 NA NA A 709 1555 1555 2.94 LINK OD1 ASP A 390 NA NA A 709 1555 1555 2.70 CISPEP 1 PRO A 500 PRO A 501 0 9.31 CRYST1 63.869 103.584 187.532 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015657 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009654 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005332 0.00000 CONECT 1798 4073 CONECT 1809 4073 CONECT 1834 4073 CONECT 3868 3869 3985 CONECT 3869 3868 3870 CONECT 3870 3869 3871 CONECT 3871 3870 3872 3873 CONECT 3872 3871 CONECT 3873 3871 CONECT 3915 3920 CONECT 3920 3915 3921 3924 CONECT 3921 3920 3922 3925 CONECT 3922 3921 3923 CONECT 3923 3922 3924 CONECT 3924 3920 3923 CONECT 3925 3921 3926 3927 CONECT 3926 3925 CONECT 3927 3925 CONECT 3973 3982 CONECT 3982 3973 3983 CONECT 3983 3982 3984 CONECT 3984 3983 3985 CONECT 3985 3868 3984 3986 CONECT 3986 3985 CONECT 3988 3989 3994 3998 CONECT 3989 3988 3990 3995 CONECT 3990 3989 3991 3996 CONECT 3991 3990 3992 3997 CONECT 3992 3991 3993 3998 CONECT 3993 3992 3999 CONECT 3994 3988 CONECT 3995 3989 CONECT 3996 3990 CONECT 3997 3991 CONECT 3998 3988 3992 CONECT 3999 3993 CONECT 4000 4001 4006 4010 CONECT 4001 4000 4002 4007 CONECT 4002 4001 4003 4008 CONECT 4003 4002 4004 4009 CONECT 4004 4003 4005 4010 CONECT 4005 4004 4011 CONECT 4006 4000 CONECT 4007 4001 CONECT 4008 4002 CONECT 4009 4003 CONECT 4010 4000 4004 CONECT 4011 4005 CONECT 4012 4013 4018 4022 CONECT 4013 4012 4014 4019 CONECT 4014 4013 4015 4020 CONECT 4015 4014 4016 4021 CONECT 4016 4015 4017 4022 CONECT 4017 4016 4023 CONECT 4018 4012 CONECT 4019 4013 CONECT 4020 4014 CONECT 4021 4015 CONECT 4022 4012 4016 CONECT 4023 4017 CONECT 4024 4025 4030 4034 CONECT 4025 4024 4026 4031 CONECT 4026 4025 4027 4032 CONECT 4027 4026 4028 4033 CONECT 4028 4027 4029 4034 CONECT 4029 4028 4035 CONECT 4030 4024 CONECT 4031 4025 CONECT 4032 4026 CONECT 4033 4027 CONECT 4034 4024 4028 CONECT 4035 4029 CONECT 4036 4037 4042 4046 CONECT 4037 4036 4038 4043 CONECT 4038 4037 4039 4044 CONECT 4039 4038 4040 4045 CONECT 4040 4039 4041 4046 CONECT 4041 4040 4047 CONECT 4042 4036 CONECT 4043 4037 CONECT 4044 4038 CONECT 4045 4039 CONECT 4046 4036 4040 CONECT 4047 4041 CONECT 4048 4049 4054 4058 CONECT 4049 4048 4050 4055 CONECT 4050 4049 4051 4056 CONECT 4051 4050 4052 4057 CONECT 4052 4051 4053 4058 CONECT 4053 4052 4059 CONECT 4054 4048 CONECT 4055 4049 CONECT 4056 4050 CONECT 4057 4051 CONECT 4058 4048 4052 CONECT 4059 4053 CONECT 4060 4061 4066 4070 CONECT 4061 4060 4062 4067 CONECT 4062 4061 4063 4068 CONECT 4063 4062 4064 4069 CONECT 4064 4063 4065 4070 CONECT 4065 4064 4071 CONECT 4066 4060 CONECT 4067 4061 CONECT 4068 4062 CONECT 4069 4063 CONECT 4070 4060 4064 CONECT 4071 4065 CONECT 4073 1798 1809 1834 MASTER 357 0 12 38 2 0 0 6 4230 2 109 41 END