HEADER LYASE, BIOSYNTHETIC PROTEIN 16-JUN-05 2A0S TITLE CRYSTAL STRUCTURE OF 6-PYRUVOYL TETRAHYDROPTERIN SYNTHASE (PTPS) FROM TITLE 2 PLASMODIUM VIVAX AT 2.2 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: 6-PYRUVOYL TETRAHYDROPTERIN SYNTHASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 4.2.3.12; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLASMODIUM VIVAX; SOURCE 3 ORGANISM_COMMON: MALARIA PARASITE P. VIVAX; SOURCE 4 ORGANISM_TAXID: 5855; SOURCE 5 GENE: MAL6P1.148; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21STAR(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: T7 SYSTEM; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET14B KEYWDS SGPP, STRUCTURAL GENOMICS, PSI, PROTEIN STRUCTURE INITIATIVE, 6- KEYWDS 2 PYRUVOYL TETRAHYDROPTERIN SYNTHASE, PTPS, PLASMODIUM, VIVAX, KEYWDS 3 STRUCTURAL GENOMICS OF PATHOGENIC PROTOZOA CONSORTIUM, LYASE, KEYWDS 4 BIOSYNTHETIC PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.BOSCH,W.G.J.HOL,STRUCTURAL GENOMICS OF PATHOGENIC PROTOZOA AUTHOR 2 CONSORTIUM (SGPP) REVDAT 4 23-AUG-23 2A0S 1 REMARK LINK REVDAT 3 13-JUL-11 2A0S 1 VERSN REVDAT 2 24-FEB-09 2A0S 1 VERSN REVDAT 1 26-JUL-05 2A0S 0 JRNL AUTH J.BOSCH,W.G.J.HOL, JRNL AUTH 2 STRUCTURAL GENOMICS OF PATHOGENIC PROTOZOA CONSORTIUM (SGPP) JRNL TITL CRYSTAL STRUCTURE OF 6-PYRUVOYL TETRAHYDROPTERIN SYNTHASE JRNL TITL 2 (PTPS) FROM PLASMODIUM VIVAX AT 2.2 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.8 REMARK 3 NUMBER OF REFLECTIONS : 21321 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1152 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.32 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2120 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 62.61 REMARK 3 BIN R VALUE (WORKING SET) : 0.2670 REMARK 3 BIN FREE R VALUE SET COUNT : 114 REMARK 3 BIN FREE R VALUE : 0.3040 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2652 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 36 REMARK 3 SOLVENT ATOMS : 186 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 33.75 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.16 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.26000 REMARK 3 B22 (A**2) : -0.26000 REMARK 3 B33 (A**2) : 0.38000 REMARK 3 B12 (A**2) : -0.13000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.267 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.211 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.136 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.533 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.936 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.911 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2825 ; 0.006 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3831 ; 0.905 ; 1.965 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 342 ; 5.196 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 145 ;35.935 ;24.483 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 513 ;12.398 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 17 ; 7.868 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 423 ; 0.057 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2155 ; 0.002 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1235 ; 0.161 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1920 ; 0.292 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 194 ; 0.089 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 106 ; 0.129 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 23 ; 0.088 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1734 ; 0.780 ; 4.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2732 ; 1.342 ; 6.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1264 ; 1.101 ; 6.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1094 ; 1.835 ;10.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 18 A 180 2 REMARK 3 1 B 18 B 180 2 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 661 ; 0.01 ; 0.05 REMARK 3 MEDIUM POSITIONAL 1 A (A): 689 ; 0.16 ; 0.50 REMARK 3 TIGHT THERMAL 1 A (A**2): 661 ; 0.01 ; 0.50 REMARK 3 MEDIUM THERMAL 1 A (A**2): 689 ; 0.10 ; 2.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 19 A 180 REMARK 3 ORIGIN FOR THE GROUP (A): -3.4290 -19.2370 0.2270 REMARK 3 T TENSOR REMARK 3 T11: -0.0288 T22: -0.0411 REMARK 3 T33: -0.0356 T12: 0.0041 REMARK 3 T13: 0.0127 T23: -0.0011 REMARK 3 L TENSOR REMARK 3 L11: 1.8975 L22: 1.4749 REMARK 3 L33: 1.0733 L12: 1.6004 REMARK 3 L13: 1.0025 L23: 0.5848 REMARK 3 S TENSOR REMARK 3 S11: 0.0647 S12: 0.0267 S13: -0.1291 REMARK 3 S21: 0.0948 S22: -0.0026 S23: -0.0777 REMARK 3 S31: 0.0049 S32: 0.0798 S33: -0.0620 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2A0S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-JUN-05. REMARK 100 THE DEPOSITION ID IS D_1000033348. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-JUN-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21321 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.8 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06000 REMARK 200 FOR THE DATA SET : 11.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.32 REMARK 200 COMPLETENESS FOR SHELL (%) : 62.6 REMARK 200 DATA REDUNDANCY IN SHELL : 2.40 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.40000 REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1Y13 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18% W/V PEG4000, 0.05 M SODIUM ACETATE REMARK 280 PH 4.6 , VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 66.04750 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 38.13254 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 24.70867 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 66.04750 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 38.13254 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 24.70867 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 66.04750 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 38.13254 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 24.70867 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 76.26508 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 49.41733 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 76.26508 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 49.41733 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 76.26508 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 49.41733 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 19660 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 36940 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -255.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 HIS A 3 REMARK 465 HIS A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 MET A 9 REMARK 465 ASN A 10 REMARK 465 PRO A 11 REMARK 465 HIS A 12 REMARK 465 PRO A 13 REMARK 465 VAL A 14 REMARK 465 GLU A 15 REMARK 465 PRO A 16 REMARK 465 ARG A 17 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 HIS B 3 REMARK 465 HIS B 4 REMARK 465 HIS B 5 REMARK 465 HIS B 6 REMARK 465 HIS B 7 REMARK 465 HIS B 8 REMARK 465 MET B 9 REMARK 465 ASN B 10 REMARK 465 PRO B 11 REMARK 465 HIS B 12 REMARK 465 PRO B 13 REMARK 465 VAL B 14 REMARK 465 GLU B 15 REMARK 465 PRO B 16 REMARK 465 ARG B 17 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 18 CG OD1 OD2 REMARK 470 ASP B 18 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 104 -114.54 52.18 REMARK 500 PRO A 128 64.90 -67.01 REMARK 500 SER A 132 44.42 -79.92 REMARK 500 ASP A 150 119.73 86.84 REMARK 500 ASN B 104 -114.32 51.60 REMARK 500 PRO B 128 65.00 -67.29 REMARK 500 SER B 132 44.96 -80.24 REMARK 500 ASP B 150 119.68 86.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 ZN 281 AND BIO 282 ARE ASSOCIATED WITH PROTEIN CHAIN A REMARK 600 ZN 381 AND BIO 382 ARE ASSOCIATED WITH PROTEIN CHAIN B REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 281 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 48 NE2 REMARK 620 2 HIS A 50 NE2 93.3 REMARK 620 3 GLU A 168 OE2 175.1 89.8 REMARK 620 4 BIO A 282 O9 107.1 146.2 71.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 381 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 36 NE2 REMARK 620 2 HIS B 48 NE2 90.7 REMARK 620 3 HIS B 50 NE2 106.3 92.2 REMARK 620 4 GLU B 168 OE2 89.3 177.4 90.3 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 281 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 381 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BIO A 282 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BIO B 382 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1Y13 RELATED DB: PDB REMARK 900 P. FALCIPARUM HOMOLOG REMARK 900 RELATED ID: PVIV004546AAA RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE THE SEQUENCE OF THIS PROTEIN IS AVAILABLE AT PLASMODB REMARK 999 WITH ID PV_3878.PHAT_30. DBREF 2A0S A 9 180 UNP A5K2B2 A5K2B2_PLAVI 1 172 DBREF 2A0S B 9 180 UNP A5K2B2 A5K2B2_PLAVI 1 172 SEQRES 1 A 180 MET ALA HIS HIS HIS HIS HIS HIS MET ASN PRO HIS PRO SEQRES 2 A 180 VAL GLU PRO ARG ASP GLN ILE ALA GLU LEU LEU VAL GLU SEQRES 3 A 180 SER PRO LEU PHE SER PHE ASN CYS ALA HIS PHE ILE ALA SEQRES 4 A 180 PHE LYS GLY PHE ARG GLU THR LEU HIS GLY HIS ASN TYR SEQRES 5 A 180 ASN VAL SER LEU ARG LEU ARG GLY ASN ILE GLN GLY ASP SEQRES 6 A 180 GLY TYR VAL ILE ASP PHE SER ILE LEU LYS GLU LYS VAL SEQRES 7 A 180 ARG LYS VAL CYS LYS GLN LEU ASP HIS HIS PHE ILE LEU SEQRES 8 A 180 PRO MET TYR SER ASP VAL LEU ASN ILE GLN GLU VAL ASN SEQRES 9 A 180 ASP ASN PHE LYS ILE THR CYS GLU ASP ASN SER GLU TYR SEQRES 10 A 180 SER PHE PRO LYS ARG ASP CYS VAL GLN ILE PRO ILE LYS SEQRES 11 A 180 HIS SER SER THR GLU GLU ILE GLY LEU TYR ILE LEU ASN SEQRES 12 A 180 GLN LEU ILE GLU GLU ILE ASP LEU PRO PHE LEU LYS THR SEQRES 13 A 180 ARG SER VAL ASN TYR MET GLU VAL THR VAL SER GLU SER SEQRES 14 A 180 PRO SER GLN LYS ALA THR VAL HIS ARG ASN ILE SEQRES 1 B 180 MET ALA HIS HIS HIS HIS HIS HIS MET ASN PRO HIS PRO SEQRES 2 B 180 VAL GLU PRO ARG ASP GLN ILE ALA GLU LEU LEU VAL GLU SEQRES 3 B 180 SER PRO LEU PHE SER PHE ASN CYS ALA HIS PHE ILE ALA SEQRES 4 B 180 PHE LYS GLY PHE ARG GLU THR LEU HIS GLY HIS ASN TYR SEQRES 5 B 180 ASN VAL SER LEU ARG LEU ARG GLY ASN ILE GLN GLY ASP SEQRES 6 B 180 GLY TYR VAL ILE ASP PHE SER ILE LEU LYS GLU LYS VAL SEQRES 7 B 180 ARG LYS VAL CYS LYS GLN LEU ASP HIS HIS PHE ILE LEU SEQRES 8 B 180 PRO MET TYR SER ASP VAL LEU ASN ILE GLN GLU VAL ASN SEQRES 9 B 180 ASP ASN PHE LYS ILE THR CYS GLU ASP ASN SER GLU TYR SEQRES 10 B 180 SER PHE PRO LYS ARG ASP CYS VAL GLN ILE PRO ILE LYS SEQRES 11 B 180 HIS SER SER THR GLU GLU ILE GLY LEU TYR ILE LEU ASN SEQRES 12 B 180 GLN LEU ILE GLU GLU ILE ASP LEU PRO PHE LEU LYS THR SEQRES 13 B 180 ARG SER VAL ASN TYR MET GLU VAL THR VAL SER GLU SER SEQRES 14 B 180 PRO SER GLN LYS ALA THR VAL HIS ARG ASN ILE HET ZN A 281 1 HET BIO A 282 17 HET ZN B 381 1 HET BIO B 382 17 HETNAM ZN ZINC ION HETNAM BIO BIOPTERIN FORMUL 3 ZN 2(ZN 2+) FORMUL 4 BIO 2(C9 H11 N5 O3) FORMUL 7 HOH *186(H2 O) HELIX 1 1 ASP A 70 ASP A 86 1 17 HELIX 2 2 SER A 133 ASP A 150 1 18 HELIX 3 3 ASP A 150 ARG A 157 1 8 HELIX 4 4 ASP B 70 ASP B 86 1 17 HELIX 5 5 SER B 133 ASP B 150 1 18 HELIX 6 6 ASP B 150 ARG B 157 1 8 SHEET 1 A 4 ILE A 20 HIS A 36 0 SHEET 2 A 4 HIS A 48 ASN A 61 -1 O GLY A 60 N ALA A 21 SHEET 3 A 4 TYR A 161 SER A 169 -1 O GLU A 163 N ARG A 57 SHEET 4 A 4 GLN A 172 ASN A 179 -1 O ALA A 174 N VAL A 166 SHEET 1 B 2 ALA A 39 PHE A 40 0 SHEET 2 B 2 PHE A 43 ARG A 44 -1 O PHE A 43 N PHE A 40 SHEET 1 C 2 PHE A 89 PRO A 92 0 SHEET 2 C 2 CYS A 124 ILE A 127 1 O VAL A 125 N PHE A 89 SHEET 1 D 3 ASN A 99 VAL A 103 0 SHEET 2 D 3 ASN A 106 THR A 110 -1 O LYS A 108 N GLN A 101 SHEET 3 D 3 GLU A 116 PRO A 120 -1 O PHE A 119 N PHE A 107 SHEET 1 E 4 ILE B 20 HIS B 36 0 SHEET 2 E 4 HIS B 48 ASN B 61 -1 O GLY B 60 N ALA B 21 SHEET 3 E 4 TYR B 161 SER B 169 -1 O GLU B 163 N ARG B 57 SHEET 4 E 4 GLN B 172 ASN B 179 -1 O ALA B 174 N VAL B 166 SHEET 1 F 2 ALA B 39 PHE B 40 0 SHEET 2 F 2 PHE B 43 ARG B 44 -1 O PHE B 43 N PHE B 40 SHEET 1 G 2 PHE B 89 PRO B 92 0 SHEET 2 G 2 CYS B 124 ILE B 127 1 O VAL B 125 N PHE B 89 SHEET 1 H 3 ASN B 99 VAL B 103 0 SHEET 2 H 3 ASN B 106 THR B 110 -1 O LYS B 108 N GLN B 101 SHEET 3 H 3 GLU B 116 PRO B 120 -1 O PHE B 119 N PHE B 107 LINK NE2 HIS A 48 ZN ZN A 281 1555 1555 2.17 LINK NE2 HIS A 50 ZN ZN A 281 1555 1555 2.12 LINK OE2 GLU A 168 ZN ZN A 281 1555 1555 2.74 LINK ZN ZN A 281 O9 BIO A 282 1555 1555 2.45 LINK NE2 HIS B 36 ZN ZN B 381 3555 1555 2.22 LINK NE2 HIS B 48 ZN ZN B 381 3555 1555 2.20 LINK NE2 HIS B 50 ZN ZN B 381 3555 1555 2.11 LINK OE2 GLU B 168 ZN ZN B 381 3555 1555 2.67 SITE 1 AC1 5 HIS A 36 HIS A 48 HIS A 50 GLU A 168 SITE 2 AC1 5 BIO A 282 SITE 1 AC2 5 HIS B 36 HIS B 48 HIS B 50 GLU B 168 SITE 2 AC2 5 BIO B 382 SITE 1 AC3 14 LEU A 23 HIS A 36 ILE A 38 GLU A 45 SITE 2 AC3 14 TYR A 67 ILE A 69 ASP A 70 PHE A 71 SITE 3 AC3 14 THR A 134 GLU A 135 GLU A 168 GLN A 172 SITE 4 AC3 14 ZN A 281 HIS B 87 SITE 1 AC4 14 HIS A 87 HOH A 346 LEU B 23 GLU B 45 SITE 2 AC4 14 HIS B 48 TYR B 67 ILE B 69 ASP B 70 SITE 3 AC4 14 PHE B 71 THR B 134 GLU B 135 GLU B 168 SITE 4 AC4 14 GLN B 172 ZN B 381 CRYST1 132.095 132.095 74.126 90.00 90.00 120.00 H 3 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007570 0.004371 0.000000 0.00000 SCALE2 0.000000 0.008741 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013491 0.00000