HEADER RECOMBINATION 21-JUN-05 2A23 OBSLTE 06-NOV-07 2A23 2JWO TITLE A PHD FINGER MOTIF IN THE C-TERMINUS OF RAG2 MODULATES TITLE 2 RECOMBINATION ACTIVITY COMPND MOL_ID: 1; COMPND 2 MOLECULE: V(D)J RECOMBINATION ACTIVATING PROTEIN 2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: PHD FINGER; COMPND 5 SYNONYM: RAG-2; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 GENE: RAG2, RAG-2; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_COMMON: BACTERIA; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PGEX-6P-3 KEYWDS V(D)J RECOMBINATION, PHOSPHOINOSITIDE SIGNALING, RAG2, PHD KEYWDS 2 DOMAIN EXPDTA NMR, 20 STRUCTURES AUTHOR D.IVANOV,O.P.GOZANI,M.EWALT,S.G.HYBERTS,Z.Y.SUN,G.WAGNER REVDAT 3 06-NOV-07 2A23 1 OBSLTE REVDAT 2 09-AUG-05 2A23 1 JRNL REVDAT 1 12-JUL-05 2A23 0 JRNL AUTH S.K.ELKIN,D.IVANOV,M.EWALT,C.G.FERGUSON, JRNL AUTH 2 S.G.HYBERTS,Z.Y.SUN,G.D.PRESTWICH,J.YUAN,G.WAGNER, JRNL AUTH 3 M.A.OETTINGER,O.P.GOZANI JRNL TITL A PHD FINGER MOTIF IN THE C TERMINUS OF RAG2 JRNL TITL 2 MODULATES RECOMBINATION ACTIVITY JRNL REF J.BIOL.CHEM. V. 280 28701 2005 JRNL REFN ASTM JBCHA3 US ISSN 0021-9258 REMARK 1 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : DYANA, XPLOR-NIH REMARK 3 AUTHORS : P.GUNTERT,C.MUMENTHALER,K.WUTHRICH (DYANA), REMARK 3 C.D.SCHWIETERS,J.J.KUSZEWSKI,N.TJANDRA,G.MARIUS REMARK 3 CLORE (XPLOR-NIH) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2A23 COMPLIES WITH FORMAT V. 3.0, 1-DEC-2006 REMARK 4 REMARK 4 THIS IS THE REMEDIATED VERSION OF THIS PDB ENTRY. REMARK 4 REMEDIATED DATA FILE REVISION 3.100 (2007-03-17) REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB. REMARK 100 THE RCSB ID CODE IS RCSB033395. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.2 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : 0.5-1.0 MM PROTEIN, 20 MM REMARK 210 TRIS, 50 MICROM ZNSO4, 13 MM REMARK 210 BETA-MERCAPTOETHANOL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : N15-HSQC, C13-HSQC, HNCA/ REMARK 210 HN(CO)CA, HN(CA)CB/HN(COCA)CB, HNCO/HN(CA)CO, H(C)(CO)NH/(H) REMARK 210 C(CO)NH/HCCH-TOCSY, N15-NOEHSQC, C13-NOEHSQC, 2D-NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : NULL REMARK 210 SPECTROMETER MODEL : NULL REMARK 210 SPECTROMETER MANUFACTURER : NULL REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH FAVORABLE NON REMARK 210 -BOND ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 6 ARG A 486 147.14 60.31 REMARK 500 8 ILE A 484 168.09 50.40 REMARK 500 12 SER A 410 151.60 61.71 REMARK 500 13 ASN A 439 -60.73 67.34 REMARK 500 14 GLU A 412 148.61 61.81 REMARK 500 16 ASN A 474 122.62 62.18 REMARK 500 18 SER A 473 -66.26 66.12 DBREF 2A23 A 414 487 UNP P21784 RAG2_MOUSE 414 487 SEQADV 2A23 GLY A 406 UNP P21784 CLONING ARTIFACT SEQADV 2A23 PRO A 407 UNP P21784 CLONING ARTIFACT SEQADV 2A23 LEU A 408 UNP P21784 CLONING ARTIFACT SEQADV 2A23 GLY A 409 UNP P21784 CLONING ARTIFACT SEQADV 2A23 SER A 410 UNP P21784 CLONING ARTIFACT SEQADV 2A23 PRO A 411 UNP P21784 CLONING ARTIFACT SEQADV 2A23 GLU A 412 UNP P21784 CLONING ARTIFACT SEQADV 2A23 PHE A 413 UNP P21784 CLONING ARTIFACT SEQRES 1 A 82 GLY PRO LEU GLY SER PRO GLU PHE GLY TYR TRP ILE THR SEQRES 2 A 82 CYS CYS PRO THR CYS ASP VAL ASP ILE ASN THR TRP VAL SEQRES 3 A 82 PRO PHE TYR SER THR GLU LEU ASN LYS PRO ALA MET ILE SEQRES 4 A 82 TYR CYS SER HIS GLY ASP GLY HIS TRP VAL HIS ALA GLN SEQRES 5 A 82 CYS MET ASP LEU GLU GLU ARG THR LEU ILE HIS LEU SER SEQRES 6 A 82 GLU GLY SER ASN LYS TYR TYR CYS ASN GLU HIS VAL GLN SEQRES 7 A 82 ILE ALA ARG ALA HET ZN 488 1 HET ZN 489 1 HETNAM ZN ZINC ION FORMUL 2 ZN 2(ZN 2+) HELIX 1 1 GLN A 457 ASP A 460 5 4 HELIX 2 2 GLU A 463 GLY A 472 1 10 SHEET 1 A 2 MET A 443 TYR A 445 0 SHEET 2 A 2 TRP A 453 HIS A 455 -1 O VAL A 454 N ILE A 444 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1