data_2A29 # _entry.id 2A29 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2A29 pdb_00002a29 10.2210/pdb2a29/pdb RCSB RCSB033401 ? ? WWPDB D_1000033401 ? ? # _pdbx_database_PDB_obs_spr.id SPRSDE _pdbx_database_PDB_obs_spr.date 2005-12-20 _pdbx_database_PDB_obs_spr.pdb_id 2A29 _pdbx_database_PDB_obs_spr.replace_pdb_id 1X6K _pdbx_database_PDB_obs_spr.details ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2A00 'solution structure of AMP-PNP bound KdpBN, 20 structures' unspecified PDB 1SVJ 'solution structure of KdpBN, minimized average structure' unspecified PDB 1U7Q 'solution structure of KdpBN, 20 structures' unspecified BMRB 6030 'chemical shifts of AMP-PNP bound KdpBN' unspecified BMRB 6029 'chemical shifts of apo-KdpBN' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2A29 _pdbx_database_status.recvd_initial_deposition_date 2005-06-22 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Haupt, M.' 1 'Bramkamp, M.' 2 'Coles, M.' 3 'Altendorf, K.' 4 'Kessler, H.' 5 # _citation.id primary _citation.title 'The Holo-form of the Nucleotide Binding Domain of the KdpFABC Complex from Escherichia coli Reveals a New Binding Mode' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 281 _citation.page_first 9641 _citation.page_last 9649 _citation.year 2006 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16354672 _citation.pdbx_database_id_DOI 10.1074/jbc.M508290200 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Haupt, M.' 1 ? primary 'Bramkamp, M.' 2 ? primary 'Heller, M.' 3 ? primary 'Coles, M.' 4 ? primary 'Deckers-Hebestreit, G.' 5 ? primary 'Herkenhoff-Hesselmann, B.' 6 ? primary 'Altendorf, K.' 7 ? primary 'Kessler, H.' 8 ? # _cell.entry_id 2A29 _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2A29 _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Potassium-transporting ATPase B chain' 17168.297 1 3.6.3.12 ? 'KdpBN, nucleotide binding domain of KdpB' ? 2 non-polymer syn 'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' 506.196 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;potassium-transporting P-type ATPase, KdpFABC, ATP phosphohydrolase [potassium- transporting] B chain, Potassium binding and translocating subunit B ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MGHHHHHHHHHHSSGHGGRHNRQASEFIPAQGVDEKTLADAAQLASLADETPEGRSIVILAKQRFNLRERDVQSLHATFV PFTAQSRMSGINIDNRMIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGSRVLGVIALKDIVKG ; _entity_poly.pdbx_seq_one_letter_code_can ;MGHHHHHHHHHHSSGHGGRHNRQASEFIPAQGVDEKTLADAAQLASLADETPEGRSIVILAKQRFNLRERDVQSLHATFV PFTAQSRMSGINIDNRMIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGSRVLGVIALKDIVKG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 HIS n 1 12 HIS n 1 13 SER n 1 14 SER n 1 15 GLY n 1 16 HIS n 1 17 GLY n 1 18 GLY n 1 19 ARG n 1 20 HIS n 1 21 ASN n 1 22 ARG n 1 23 GLN n 1 24 ALA n 1 25 SER n 1 26 GLU n 1 27 PHE n 1 28 ILE n 1 29 PRO n 1 30 ALA n 1 31 GLN n 1 32 GLY n 1 33 VAL n 1 34 ASP n 1 35 GLU n 1 36 LYS n 1 37 THR n 1 38 LEU n 1 39 ALA n 1 40 ASP n 1 41 ALA n 1 42 ALA n 1 43 GLN n 1 44 LEU n 1 45 ALA n 1 46 SER n 1 47 LEU n 1 48 ALA n 1 49 ASP n 1 50 GLU n 1 51 THR n 1 52 PRO n 1 53 GLU n 1 54 GLY n 1 55 ARG n 1 56 SER n 1 57 ILE n 1 58 VAL n 1 59 ILE n 1 60 LEU n 1 61 ALA n 1 62 LYS n 1 63 GLN n 1 64 ARG n 1 65 PHE n 1 66 ASN n 1 67 LEU n 1 68 ARG n 1 69 GLU n 1 70 ARG n 1 71 ASP n 1 72 VAL n 1 73 GLN n 1 74 SER n 1 75 LEU n 1 76 HIS n 1 77 ALA n 1 78 THR n 1 79 PHE n 1 80 VAL n 1 81 PRO n 1 82 PHE n 1 83 THR n 1 84 ALA n 1 85 GLN n 1 86 SER n 1 87 ARG n 1 88 MET n 1 89 SER n 1 90 GLY n 1 91 ILE n 1 92 ASN n 1 93 ILE n 1 94 ASP n 1 95 ASN n 1 96 ARG n 1 97 MET n 1 98 ILE n 1 99 ARG n 1 100 LYS n 1 101 GLY n 1 102 SER n 1 103 VAL n 1 104 ASP n 1 105 ALA n 1 106 ILE n 1 107 ARG n 1 108 ARG n 1 109 HIS n 1 110 VAL n 1 111 GLU n 1 112 ALA n 1 113 ASN n 1 114 GLY n 1 115 GLY n 1 116 HIS n 1 117 PHE n 1 118 PRO n 1 119 THR n 1 120 ASP n 1 121 VAL n 1 122 ASP n 1 123 GLN n 1 124 LYS n 1 125 VAL n 1 126 ASP n 1 127 GLN n 1 128 VAL n 1 129 ALA n 1 130 ARG n 1 131 GLN n 1 132 GLY n 1 133 ALA n 1 134 THR n 1 135 PRO n 1 136 LEU n 1 137 VAL n 1 138 VAL n 1 139 VAL n 1 140 GLU n 1 141 GLY n 1 142 SER n 1 143 ARG n 1 144 VAL n 1 145 LEU n 1 146 GLY n 1 147 VAL n 1 148 ILE n 1 149 ALA n 1 150 LEU n 1 151 LYS n 1 152 ASP n 1 153 ILE n 1 154 VAL n 1 155 LYS n 1 156 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Escherichia _entity_src_gen.pdbx_gene_src_gene KDPB _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 562 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET16B _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code ATKB_ECOLI _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;NRQASEFIPAQGVDEKTLADAAQLASLADETPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMSGINIDNRMIRK GSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGSRVLGVIALKDIVKG ; _struct_ref.pdbx_align_begin 316 _struct_ref.pdbx_db_accession P03960 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2A29 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 21 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 156 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P03960 _struct_ref_seq.db_align_beg 316 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 451 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 316 _struct_ref_seq.pdbx_auth_seq_align_end 451 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2A29 MET A 1 ? UNP P03960 ? ? 'expression tag' 296 1 1 2A29 GLY A 2 ? UNP P03960 ? ? 'expression tag' 297 2 1 2A29 HIS A 3 ? UNP P03960 ? ? 'expression tag' 298 3 1 2A29 HIS A 4 ? UNP P03960 ? ? 'expression tag' 299 4 1 2A29 HIS A 5 ? UNP P03960 ? ? 'expression tag' 300 5 1 2A29 HIS A 6 ? UNP P03960 ? ? 'expression tag' 301 6 1 2A29 HIS A 7 ? UNP P03960 ? ? 'expression tag' 302 7 1 2A29 HIS A 8 ? UNP P03960 ? ? 'expression tag' 303 8 1 2A29 HIS A 9 ? UNP P03960 ? ? 'expression tag' 304 9 1 2A29 HIS A 10 ? UNP P03960 ? ? 'expression tag' 305 10 1 2A29 HIS A 11 ? UNP P03960 ? ? 'expression tag' 306 11 1 2A29 HIS A 12 ? UNP P03960 ? ? 'expression tag' 307 12 1 2A29 SER A 13 ? UNP P03960 ? ? 'expression tag' 308 13 1 2A29 SER A 14 ? UNP P03960 ? ? 'expression tag' 309 14 1 2A29 GLY A 15 ? UNP P03960 ? ? 'expression tag' 310 15 1 2A29 HIS A 16 ? UNP P03960 ? ? 'expression tag' 311 16 1 2A29 GLY A 17 ? UNP P03960 ? ? 'expression tag' 312 17 1 2A29 GLY A 18 ? UNP P03960 ? ? 'expression tag' 313 18 1 2A29 ARG A 19 ? UNP P03960 ? ? 'expression tag' 314 19 1 2A29 HIS A 20 ? UNP P03960 ? ? 'expression tag' 315 20 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ANP non-polymer . 'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' ? 'C10 H17 N6 O12 P3' 506.196 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-SEPARATED_NOESY 1 2 1 'CNH- NOESY' 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 300 _pdbx_nmr_exptl_sample_conditions.pressure AMBIENT _pdbx_nmr_exptl_sample_conditions.pH 6.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength '100mM NACL' _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents ;1.0MM U-15N, 13C KDPBN, 50MM PHOSPHATE BUFFER, 100MM NACL, 0.05% SODIUM AZIDE, 15MM ATP- PNP; 1.0MM U-15N KDPBN, 50MM PHOSPHATE BUFFER, 100MM NACL, 0.05% SODIUM AZIDE, 15MM AMP- PNP ; _pdbx_nmr_sample_details.solvent_system ? # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.type 1 DMX Bruker 900 ? 2 DMX Bruker 750 ? 3 DMX Bruker 600 ? # _pdbx_nmr_refine.entry_id 2A29 _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details 'BASED ON A TOTAL OF 1667 NOE-BASED DISTANCE RESTRAINTS, 230 DIHEDRAL ANGLE RESTRAINTS AND 21 INTERMOLECULAR DISTANCE RESTRAINTS' _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2A29 _pdbx_nmr_ensemble.conformers_calculated_total_number ? _pdbx_nmr_ensemble.conformers_submitted_total_number 1 _pdbx_nmr_ensemble.conformer_selection_criteria ? # _pdbx_nmr_representative.entry_id 2A29 _pdbx_nmr_representative.conformer_id ? _pdbx_nmr_representative.selection_criteria 'minimized average structure' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal refinement X-PLOR NIH-2.9.3 BRUNGER 1 'structure solution' XwinNMR 3.5 Bruker 2 'structure solution' X-PLOR NIH-2.9.3 Brunger 3 'data analysis' Sparky 3.110 'Goddard, Kneller' 4 # _exptl.entry_id 2A29 _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2A29 _struct.title 'The solution structure of the AMP-PNP bound nucleotide binding domain of KdpB' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details 'minimized average' # _struct_keywords.entry_id 2A29 _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'ALPHA-BETA SANDWICH, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 34 ? ALA A 48 ? ASP A 329 ALA A 343 1 ? 15 HELX_P HELX_P2 2 THR A 51 ? ASN A 66 ? THR A 346 ASN A 361 1 ? 16 HELX_P HELX_P3 3 SER A 102 ? GLY A 114 ? SER A 397 GLY A 409 1 ? 13 HELX_P HELX_P4 4 PRO A 118 ? GLN A 131 ? PRO A 413 GLN A 426 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ARG A 22 ? PRO A 29 ? ARG A 317 PRO A 324 A 2 ARG A 143 ? ASP A 152 ? ARG A 438 ASP A 447 A 3 THR A 134 ? GLU A 140 ? THR A 429 GLU A 435 A 4 ARG A 96 ? GLY A 101 ? ARG A 391 GLY A 396 A 5 MET A 88 ? ILE A 93 ? MET A 383 ILE A 388 A 6 THR A 78 ? THR A 83 ? THR A 373 THR A 378 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 28 ? N ILE A 323 O VAL A 147 ? O VAL A 442 A 2 3 O ILE A 148 ? O ILE A 443 N LEU A 136 ? N LEU A 431 A 3 4 O VAL A 139 ? O VAL A 434 N ARG A 99 ? N ARG A 394 A 4 5 O LYS A 100 ? O LYS A 395 N SER A 89 ? N SER A 384 A 5 6 O ASN A 92 ? O ASN A 387 N THR A 78 ? N THR A 373 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id ANP _struct_site.pdbx_auth_seq_id 1001 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 12 _struct_site.details 'BINDING SITE FOR RESIDUE ANP A 1001' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 12 ARG A 22 ? ARG A 317 . ? 1_555 ? 2 AC1 12 ASP A 49 ? ASP A 344 . ? 1_555 ? 3 AC1 12 THR A 51 ? THR A 346 . ? 1_555 ? 4 AC1 12 GLU A 53 ? GLU A 348 . ? 1_555 ? 5 AC1 12 GLY A 54 ? GLY A 349 . ? 1_555 ? 6 AC1 12 PHE A 82 ? PHE A 377 . ? 1_555 ? 7 AC1 12 ALA A 84 ? ALA A 379 . ? 1_555 ? 8 AC1 12 ARG A 87 ? ARG A 382 . ? 1_555 ? 9 AC1 12 SER A 89 ? SER A 384 . ? 1_555 ? 10 AC1 12 LYS A 100 ? LYS A 395 . ? 1_555 ? 11 AC1 12 GLY A 101 ? GLY A 396 . ? 1_555 ? 12 AC1 12 LEU A 136 ? LEU A 431 . ? 1_555 ? # _database_PDB_matrix.entry_id 2A29 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2A29 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 296 ? ? ? A . n A 1 2 GLY 2 297 ? ? ? A . n A 1 3 HIS 3 298 ? ? ? A . n A 1 4 HIS 4 299 ? ? ? A . n A 1 5 HIS 5 300 ? ? ? A . n A 1 6 HIS 6 301 ? ? ? A . n A 1 7 HIS 7 302 ? ? ? A . n A 1 8 HIS 8 303 ? ? ? A . n A 1 9 HIS 9 304 ? ? ? A . n A 1 10 HIS 10 305 ? ? ? A . n A 1 11 HIS 11 306 ? ? ? A . n A 1 12 HIS 12 307 ? ? ? A . n A 1 13 SER 13 308 ? ? ? A . n A 1 14 SER 14 309 ? ? ? A . n A 1 15 GLY 15 310 ? ? ? A . n A 1 16 HIS 16 311 ? ? ? A . n A 1 17 GLY 17 312 ? ? ? A . n A 1 18 GLY 18 313 ? ? ? A . n A 1 19 ARG 19 314 ? ? ? A . n A 1 20 HIS 20 315 ? ? ? A . n A 1 21 ASN 21 316 316 ASN ASN A . n A 1 22 ARG 22 317 317 ARG ARG A . n A 1 23 GLN 23 318 318 GLN GLN A . n A 1 24 ALA 24 319 319 ALA ALA A . n A 1 25 SER 25 320 320 SER SER A . n A 1 26 GLU 26 321 321 GLU GLU A . n A 1 27 PHE 27 322 322 PHE PHE A . n A 1 28 ILE 28 323 323 ILE ILE A . n A 1 29 PRO 29 324 324 PRO PRO A . n A 1 30 ALA 30 325 325 ALA ALA A . n A 1 31 GLN 31 326 326 GLN GLN A . n A 1 32 GLY 32 327 327 GLY GLY A . n A 1 33 VAL 33 328 328 VAL VAL A . n A 1 34 ASP 34 329 329 ASP ASP A . n A 1 35 GLU 35 330 330 GLU GLU A . n A 1 36 LYS 36 331 331 LYS LYS A . n A 1 37 THR 37 332 332 THR THR A . n A 1 38 LEU 38 333 333 LEU LEU A . n A 1 39 ALA 39 334 334 ALA ALA A . n A 1 40 ASP 40 335 335 ASP ASP A . n A 1 41 ALA 41 336 336 ALA ALA A . n A 1 42 ALA 42 337 337 ALA ALA A . n A 1 43 GLN 43 338 338 GLN GLN A . n A 1 44 LEU 44 339 339 LEU LEU A . n A 1 45 ALA 45 340 340 ALA ALA A . n A 1 46 SER 46 341 341 SER SER A . n A 1 47 LEU 47 342 342 LEU LEU A . n A 1 48 ALA 48 343 343 ALA ALA A . n A 1 49 ASP 49 344 344 ASP ASP A . n A 1 50 GLU 50 345 345 GLU GLU A . n A 1 51 THR 51 346 346 THR THR A . n A 1 52 PRO 52 347 347 PRO PRO A . n A 1 53 GLU 53 348 348 GLU GLU A . n A 1 54 GLY 54 349 349 GLY GLY A . n A 1 55 ARG 55 350 350 ARG ARG A . n A 1 56 SER 56 351 351 SER SER A . n A 1 57 ILE 57 352 352 ILE ILE A . n A 1 58 VAL 58 353 353 VAL VAL A . n A 1 59 ILE 59 354 354 ILE ILE A . n A 1 60 LEU 60 355 355 LEU LEU A . n A 1 61 ALA 61 356 356 ALA ALA A . n A 1 62 LYS 62 357 357 LYS LYS A . n A 1 63 GLN 63 358 358 GLN GLN A . n A 1 64 ARG 64 359 359 ARG ARG A . n A 1 65 PHE 65 360 360 PHE PHE A . n A 1 66 ASN 66 361 361 ASN ASN A . n A 1 67 LEU 67 362 362 LEU LEU A . n A 1 68 ARG 68 363 363 ARG ARG A . n A 1 69 GLU 69 364 364 GLU GLU A . n A 1 70 ARG 70 365 365 ARG ARG A . n A 1 71 ASP 71 366 366 ASP ASP A . n A 1 72 VAL 72 367 367 VAL VAL A . n A 1 73 GLN 73 368 368 GLN GLN A . n A 1 74 SER 74 369 369 SER SER A . n A 1 75 LEU 75 370 370 LEU LEU A . n A 1 76 HIS 76 371 371 HIS HIS A . n A 1 77 ALA 77 372 372 ALA ALA A . n A 1 78 THR 78 373 373 THR THR A . n A 1 79 PHE 79 374 374 PHE PHE A . n A 1 80 VAL 80 375 375 VAL VAL A . n A 1 81 PRO 81 376 376 PRO PRO A . n A 1 82 PHE 82 377 377 PHE PHE A . n A 1 83 THR 83 378 378 THR THR A . n A 1 84 ALA 84 379 379 ALA ALA A . n A 1 85 GLN 85 380 380 GLN GLN A . n A 1 86 SER 86 381 381 SER SER A . n A 1 87 ARG 87 382 382 ARG ARG A . n A 1 88 MET 88 383 383 MET MET A . n A 1 89 SER 89 384 384 SER SER A . n A 1 90 GLY 90 385 385 GLY GLY A . n A 1 91 ILE 91 386 386 ILE ILE A . n A 1 92 ASN 92 387 387 ASN ASN A . n A 1 93 ILE 93 388 388 ILE ILE A . n A 1 94 ASP 94 389 389 ASP ASP A . n A 1 95 ASN 95 390 390 ASN ASN A . n A 1 96 ARG 96 391 391 ARG ARG A . n A 1 97 MET 97 392 392 MET MET A . n A 1 98 ILE 98 393 393 ILE ILE A . n A 1 99 ARG 99 394 394 ARG ARG A . n A 1 100 LYS 100 395 395 LYS LYS A . n A 1 101 GLY 101 396 396 GLY GLY A . n A 1 102 SER 102 397 397 SER SER A . n A 1 103 VAL 103 398 398 VAL VAL A . n A 1 104 ASP 104 399 399 ASP ASP A . n A 1 105 ALA 105 400 400 ALA ALA A . n A 1 106 ILE 106 401 401 ILE ILE A . n A 1 107 ARG 107 402 402 ARG ARG A . n A 1 108 ARG 108 403 403 ARG ARG A . n A 1 109 HIS 109 404 404 HIS HIS A . n A 1 110 VAL 110 405 405 VAL VAL A . n A 1 111 GLU 111 406 406 GLU GLU A . n A 1 112 ALA 112 407 407 ALA ALA A . n A 1 113 ASN 113 408 408 ASN ASN A . n A 1 114 GLY 114 409 409 GLY GLY A . n A 1 115 GLY 115 410 410 GLY GLY A . n A 1 116 HIS 116 411 411 HIS HIS A . n A 1 117 PHE 117 412 412 PHE PHE A . n A 1 118 PRO 118 413 413 PRO PRO A . n A 1 119 THR 119 414 414 THR THR A . n A 1 120 ASP 120 415 415 ASP ASP A . n A 1 121 VAL 121 416 416 VAL VAL A . n A 1 122 ASP 122 417 417 ASP ASP A . n A 1 123 GLN 123 418 418 GLN GLN A . n A 1 124 LYS 124 419 419 LYS LYS A . n A 1 125 VAL 125 420 420 VAL VAL A . n A 1 126 ASP 126 421 421 ASP ASP A . n A 1 127 GLN 127 422 422 GLN GLN A . n A 1 128 VAL 128 423 423 VAL VAL A . n A 1 129 ALA 129 424 424 ALA ALA A . n A 1 130 ARG 130 425 425 ARG ARG A . n A 1 131 GLN 131 426 426 GLN GLN A . n A 1 132 GLY 132 427 427 GLY GLY A . n A 1 133 ALA 133 428 428 ALA ALA A . n A 1 134 THR 134 429 429 THR THR A . n A 1 135 PRO 135 430 430 PRO PRO A . n A 1 136 LEU 136 431 431 LEU LEU A . n A 1 137 VAL 137 432 432 VAL VAL A . n A 1 138 VAL 138 433 433 VAL VAL A . n A 1 139 VAL 139 434 434 VAL VAL A . n A 1 140 GLU 140 435 435 GLU GLU A . n A 1 141 GLY 141 436 436 GLY GLY A . n A 1 142 SER 142 437 437 SER SER A . n A 1 143 ARG 143 438 438 ARG ARG A . n A 1 144 VAL 144 439 439 VAL VAL A . n A 1 145 LEU 145 440 440 LEU LEU A . n A 1 146 GLY 146 441 441 GLY GLY A . n A 1 147 VAL 147 442 442 VAL VAL A . n A 1 148 ILE 148 443 443 ILE ILE A . n A 1 149 ALA 149 444 444 ALA ALA A . n A 1 150 LEU 150 445 445 LEU LEU A . n A 1 151 LYS 151 446 446 LYS LYS A . n A 1 152 ASP 152 447 447 ASP ASP A . n A 1 153 ILE 153 448 448 ILE ILE A . n A 1 154 VAL 154 449 449 VAL VAL A . n A 1 155 LYS 155 450 450 LYS LYS A . n A 1 156 GLY 156 451 451 GLY GLY A . n # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id ANP _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 1001 _pdbx_nonpoly_scheme.auth_seq_num 1001 _pdbx_nonpoly_scheme.pdb_mon_id ANP _pdbx_nonpoly_scheme.auth_mon_id ANP _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-12-20 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list 5 4 'Structure model' struct_ref_seq_dif 6 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_struct_ref_seq_dif.details' 5 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 H A ALA 325 ? ? O A LEU 440 ? ? 1.50 2 1 O A VAL 367 ? ? H A ALA 372 ? ? 1.53 3 1 O A VAL 405 ? ? H A GLY 410 ? ? 1.57 4 1 O A ALA 356 ? ? H A PHE 360 ? ? 1.59 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 325 ? ? -77.18 -166.13 2 1 ASP A 389 ? ? -63.73 7.83 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 296 ? A MET 1 2 1 Y 1 A GLY 297 ? A GLY 2 3 1 Y 1 A HIS 298 ? A HIS 3 4 1 Y 1 A HIS 299 ? A HIS 4 5 1 Y 1 A HIS 300 ? A HIS 5 6 1 Y 1 A HIS 301 ? A HIS 6 7 1 Y 1 A HIS 302 ? A HIS 7 8 1 Y 1 A HIS 303 ? A HIS 8 9 1 Y 1 A HIS 304 ? A HIS 9 10 1 Y 1 A HIS 305 ? A HIS 10 11 1 Y 1 A HIS 306 ? A HIS 11 12 1 Y 1 A HIS 307 ? A HIS 12 13 1 Y 1 A SER 308 ? A SER 13 14 1 Y 1 A SER 309 ? A SER 14 15 1 Y 1 A GLY 310 ? A GLY 15 16 1 Y 1 A HIS 311 ? A HIS 16 17 1 Y 1 A GLY 312 ? A GLY 17 18 1 Y 1 A GLY 313 ? A GLY 18 19 1 Y 1 A ARG 314 ? A ARG 19 20 1 Y 1 A HIS 315 ? A HIS 20 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name 'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' _pdbx_entity_nonpoly.comp_id ANP #