HEADER ELECTRON TRANSPORT 25-JUN-05 2A3P TITLE STRUCTURE OF DESULFOVIBRIO DESULFURICANS G20 TETRAHEME CYTOCHROME WITH TITLE 2 BOUND MOLYBDATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: COG3005: NITRATE/TMAO REDUCTASES, MEMBRANE-BOUND TETRAHEME COMPND 3 CYTOCHROME C SUBUNIT; COMPND 4 CHAIN: A; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DESULFOVIBRIO DESULFURICANS SUBSP. SOURCE 3 DESULFURICANS STR.; SOURCE 4 ORGANISM_TAXID: 207559; SOURCE 5 STRAIN: G20; SOURCE 6 EXPRESSION_SYSTEM: DESULFOVIBRIO DESULFURICANS SUBSP. DESULFURICANS SOURCE 7 STR. G20; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 207559; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: SUBSP. DESULFURICANS STR. G20 KEYWDS DESULFOVIBRIO, TETRAHEME CYTOCHROME, CYTOCHROME C3, ELECTRON KEYWDS 2 TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR M.V.PATTARKINE,Y.-H.LEE,J.J.TANNER,J.D.WALL REVDAT 8 20-NOV-24 2A3P 1 REMARK REVDAT 7 23-AUG-23 2A3P 1 REMARK REVDAT 6 03-MAR-21 2A3P 1 COMPND REMARK HET HETNAM REVDAT 6 2 1 HETSYN FORMUL LINK SITE REVDAT 6 3 1 ATOM REVDAT 5 11-OCT-17 2A3P 1 REMARK REVDAT 4 13-JUL-11 2A3P 1 VERSN REVDAT 3 24-FEB-09 2A3P 1 VERSN REVDAT 2 09-MAY-06 2A3P 1 JRNL REVDAT 1 18-APR-06 2A3P 0 JRNL AUTH M.V.PATTARKINE,J.J.TANNER,C.A.BOTTOMS,Y.-H.LEE,J.D.WALL JRNL TITL DESULFOVIBRIO DESULFURICANS G20 TETRAHEME CYTOCHROME JRNL TITL 2 STRUCTURE AT 1.5A AND CYTOCHROME INTERACTION WITH METAL JRNL TITL 3 COMPLEXES JRNL REF J.MOL.BIOL. V. 358 1314 2006 JRNL REFN ISSN 0022-2836 JRNL PMID 16580681 JRNL DOI 10.1016/J.JMB.2006.03.010 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.13 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 4479 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.700 REMARK 3 FREE R VALUE TEST SET COUNT : 482 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 287 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.59 REMARK 3 BIN R VALUE (WORKING SET) : 0.2150 REMARK 3 BIN FREE R VALUE SET COUNT : 38 REMARK 3 BIN FREE R VALUE : 0.3090 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 804 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 177 REMARK 3 SOLVENT ATOMS : 9 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.89000 REMARK 3 B22 (A**2) : 1.33000 REMARK 3 B33 (A**2) : -2.22000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.632 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.278 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.192 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 15.338 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.947 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.915 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1041 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1439 ; 1.856 ; 2.455 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 106 ; 5.792 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 33 ;42.083 ;25.152 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 144 ;17.388 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 1 ; 3.962 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 122 ; 0.088 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 785 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 424 ; 0.192 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 665 ; 0.275 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 29 ; 0.137 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 40 ; 0.196 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 5 ; 0.235 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 538 ; 1.628 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 852 ; 2.572 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 577 ; 3.193 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 579 ; 4.006 ; 4.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 504 REMARK 3 ORIGIN FOR THE GROUP (A): 14.7000 0.7660 4.6000 REMARK 3 T TENSOR REMARK 3 T11: -0.0717 T22: -0.1362 REMARK 3 T33: -0.1851 T12: 0.0073 REMARK 3 T13: -0.0056 T23: -0.0051 REMARK 3 L TENSOR REMARK 3 L11: 2.3124 L22: 2.6982 REMARK 3 L33: 2.3324 L12: 0.2611 REMARK 3 L13: -0.3006 L23: -1.2365 REMARK 3 S TENSOR REMARK 3 S11: 0.0909 S12: 0.0916 S13: 0.0699 REMARK 3 S21: 0.0556 S22: -0.0249 S23: 0.0685 REMARK 3 S31: 0.0279 S32: -0.2350 S33: -0.0660 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2A3P COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-AUG-05. REMARK 100 THE DEPOSITION ID IS D_1000033448. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 173 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 5706 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.5 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.09700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.52300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 2A3M REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.11 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.92 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 4000, 5% ETHYLENE GLYCOL, 0.2M REMARK 280 ZNCL2, 0.1 M IMIDAZOLE, PH 7.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 21.58000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 28.94350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 21.85000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 28.94350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 21.58000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 21.85000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -22 REMARK 465 ARG A -21 REMARK 465 LYS A -20 REMARK 465 SER A -19 REMARK 465 LEU A -18 REMARK 465 PHE A -17 REMARK 465 ALA A -16 REMARK 465 VAL A -15 REMARK 465 MET A -14 REMARK 465 VAL A -13 REMARK 465 LEU A -12 REMARK 465 ALA A -11 REMARK 465 LEU A -10 REMARK 465 VAL A -9 REMARK 465 ALA A -8 REMARK 465 ALA A -7 REMARK 465 PHE A -6 REMARK 465 ALA A -5 REMARK 465 LEU A -4 REMARK 465 PRO A -3 REMARK 465 VAL A -2 REMARK 465 ILE A -1 REMARK 465 ALA A 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 9 CD CE NZ REMARK 470 LYS A 14 CD CE NZ REMARK 470 LYS A 57 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 50 -111.73 -113.57 REMARK 500 HIS A 51 65.23 -101.36 REMARK 500 THR A 74 -59.27 -124.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 501 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 21 NE2 REMARK 620 2 HEC A 501 NA 90.5 REMARK 620 3 HEC A 501 NB 83.2 92.3 REMARK 620 4 HEC A 501 NC 86.1 176.3 85.9 REMARK 620 5 HEC A 501 ND 93.0 90.4 175.3 91.2 REMARK 620 6 HIS A 33 NE2 175.8 92.0 93.3 91.4 90.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 503 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 24 NE2 REMARK 620 2 HEC A 503 NA 90.8 REMARK 620 3 HEC A 503 NB 89.2 87.6 REMARK 620 4 HEC A 503 NC 87.9 177.5 90.2 REMARK 620 5 HEC A 503 ND 90.6 89.4 177.1 92.7 REMARK 620 6 HIS A 83 NE2 176.8 90.4 93.8 91.0 86.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 502 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 34 NE2 REMARK 620 2 HEC A 502 NA 86.6 REMARK 620 3 HEC A 502 NB 84.9 90.3 REMARK 620 4 HEC A 502 NC 92.1 178.4 88.7 REMARK 620 5 HEC A 502 ND 97.1 91.4 177.5 89.6 REMARK 620 6 HIS A 51 NE2 173.2 94.4 88.4 86.8 89.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 504 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 69 NE2 REMARK 620 2 HEC A 504 NA 89.1 REMARK 620 3 HEC A 504 NB 95.2 90.1 REMARK 620 4 HEC A 504 NC 88.8 177.9 90.3 REMARK 620 5 HEC A 504 ND 85.8 88.1 177.9 91.6 REMARK 620 6 HIS A 106 NE2 170.4 92.6 94.3 89.4 84.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MOO A 113 MO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HEC A 504 O2A REMARK 620 2 MOO A 113 O1 78.2 REMARK 620 3 MOO A 113 O2 68.4 127.0 REMARK 620 4 MOO A 113 O3 173.8 107.5 105.8 REMARK 620 5 MOO A 113 O4 80.2 108.4 105.1 99.7 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEC A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEC A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEC A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEC A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MOO A 113 DBREF 2A3P A -22 107 UNP Q30WH0 Q30WH0_DESDG 1 130 SEQRES 1 A 130 MET ARG LYS SER LEU PHE ALA VAL MET VAL LEU ALA LEU SEQRES 2 A 130 VAL ALA ALA PHE ALA LEU PRO VAL ILE ALA ALA GLU ALA SEQRES 3 A 130 PRO ALA ASP GLY LEU LYS MET GLU ASN THR LYS MET PRO SEQRES 4 A 130 VAL ILE PHE ASN HIS SER SER HIS SER SER TYR GLN CYS SEQRES 5 A 130 ALA ASP CYS HIS HIS PRO VAL ASP GLY LYS GLU ASN LEU SEQRES 6 A 130 ALA LYS CYS ALA THR ALA GLY CYS HIS ASP VAL PHE ASP SEQRES 7 A 130 LYS LYS ASP LYS SER VAL HIS SER TYR TYR LYS ILE ILE SEQRES 8 A 130 HIS ASP ARG LYS ALA THR THR VAL ALA THR CYS MET SER SEQRES 9 A 130 CYS HIS LEU GLU ALA ALA GLY SER ASP LYS ASP LEU LYS SEQRES 10 A 130 LYS GLU LEU THR GLY CYS LYS LYS SER LYS CYS HIS PRO HET HEC A 501 43 HET HEC A 502 43 HET HEC A 503 43 HET HEC A 504 43 HET MOO A 113 5 HETNAM HEC HEME C HETNAM MOO MOLYBDATE ION HETSYN MOO MOLYBDATE FORMUL 2 HEC 4(C34 H34 FE N4 O4) FORMUL 6 MOO MO O4 2- FORMUL 7 HOH *9(H2 O) HELIX 1 1 ASN A 20 SER A 25 5 6 HELIX 2 2 GLN A 28 CYS A 32 5 5 HELIX 3 3 SER A 63 ASP A 70 1 8 HELIX 4 4 THR A 78 GLY A 88 1 11 HELIX 5 5 ASP A 90 THR A 98 1 9 SHEET 1 A 2 LEU A 8 MET A 10 0 SHEET 2 A 2 VAL A 17 PHE A 19 -1 O PHE A 19 N LEU A 8 LINK SG CYS A 29 CAB HEC A 501 1555 1555 1.62 LINK SG CYS A 32 CAC HEC A 501 1555 1555 1.64 LINK SG CYS A 45 CAB HEC A 502 1555 1555 1.62 LINK SG CYS A 50 CAC HEC A 502 1555 1555 1.63 LINK SG CYS A 79 CAB HEC A 503 1555 1555 1.62 LINK SG CYS A 82 CAC HEC A 503 1555 1555 1.62 LINK SG CYS A 100 CAB HEC A 504 1555 1555 1.65 LINK SG CYS A 105 CAC HEC A 504 1555 1555 1.64 LINK NE2 HIS A 21 FE HEC A 501 1555 1555 1.91 LINK NE2 HIS A 24 FE HEC A 503 1555 1555 1.89 LINK NE2 HIS A 33 FE HEC A 501 1555 1555 1.88 LINK NE2 HIS A 34 FE HEC A 502 1555 1555 1.88 LINK NE2 HIS A 51 FE HEC A 502 1555 1555 1.88 LINK NE2 HIS A 69 FE HEC A 504 1555 1555 1.90 LINK NE2 HIS A 83 FE HEC A 503 1555 1555 1.89 LINK NE2 HIS A 106 FE HEC A 504 1555 1555 1.88 LINK MO MOO A 113 O2A HEC A 504 1555 1555 2.37 SITE 1 AC1 16 ALA A 1 GLU A 2 PRO A 4 LEU A 8 SITE 2 AC1 16 MET A 10 PHE A 19 HIS A 21 HIS A 24 SITE 3 AC1 16 TYR A 27 GLN A 28 CYS A 29 CYS A 32 SITE 4 AC1 16 HIS A 33 LYS A 44 CYS A 45 HEC A 503 SITE 1 AC2 14 CYS A 32 HIS A 34 ASN A 41 ALA A 43 SITE 2 AC2 14 LYS A 44 CYS A 45 CYS A 50 HIS A 51 SITE 3 AC2 14 VAL A 61 LYS A 66 ILE A 67 VAL A 76 SITE 4 AC2 14 ALA A 77 PRO A 107 SITE 1 AC3 11 ASN A 20 SER A 23 HIS A 24 TYR A 27 SITE 2 AC3 11 THR A 78 CYS A 79 CYS A 82 HIS A 83 SITE 3 AC3 11 LYS A 101 LYS A 104 HEC A 501 SITE 1 AC4 24 MET A 10 GLU A 11 ASN A 12 THR A 13 SITE 2 AC4 24 PRO A 16 VAL A 17 PHE A 54 LYS A 56 SITE 3 AC4 24 TYR A 64 TYR A 65 ILE A 68 HIS A 69 SITE 4 AC4 24 CYS A 79 MET A 80 HIS A 83 ASP A 90 SITE 5 AC4 24 LEU A 93 LEU A 97 THR A 98 GLY A 99 SITE 6 AC4 24 CYS A 100 CYS A 105 HIS A 106 MOO A 113 SITE 1 AC5 6 THR A 13 LYS A 14 LYS A 56 ASP A 90 SITE 2 AC5 6 ASP A 92 HEC A 504 CRYST1 43.160 43.700 57.887 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023170 0.000000 0.000000 0.00000 SCALE2 0.000000 0.022883 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017275 0.00000