data_2A5B # _entry.id 2A5B # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.399 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2A5B pdb_00002a5b 10.2210/pdb2a5b/pdb RCSB RCSB033506 ? ? WWPDB D_1000033506 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-05-23 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2020-07-29 5 'Structure model' 1 4 2023-08-23 6 'Structure model' 1 5 2024-11-20 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Derived calculations' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' Advisory 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Database references' 7 4 'Structure model' 'Derived calculations' 8 4 'Structure model' 'Structure summary' 9 5 'Structure model' Advisory 10 5 'Structure model' 'Data collection' 11 5 'Structure model' 'Database references' 12 5 'Structure model' 'Refinement description' 13 5 'Structure model' 'Structure summary' 14 6 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp 2 4 'Structure model' database_PDB_caveat 3 4 'Structure model' entity 4 4 'Structure model' pdbx_chem_comp_identifier 5 4 'Structure model' pdbx_entity_nonpoly 6 4 'Structure model' pdbx_unobs_or_zero_occ_atoms 7 4 'Structure model' struct_conn 8 4 'Structure model' struct_ref_seq_dif 9 4 'Structure model' struct_site 10 4 'Structure model' struct_site_gen 11 5 'Structure model' chem_comp 12 5 'Structure model' chem_comp_atom 13 5 'Structure model' chem_comp_bond 14 5 'Structure model' database_2 15 5 'Structure model' pdbx_initial_refinement_model 16 5 'Structure model' pdbx_unobs_or_zero_occ_atoms 17 5 'Structure model' struct_ncs_dom_lim 18 6 'Structure model' pdbx_entry_details 19 6 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_chem_comp.name' 2 4 'Structure model' '_chem_comp.type' 3 4 'Structure model' '_entity.pdbx_description' 4 4 'Structure model' '_pdbx_entity_nonpoly.name' 5 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 6 4 'Structure model' '_struct_conn.pdbx_role' 7 4 'Structure model' '_struct_ref_seq_dif.details' 8 5 'Structure model' '_chem_comp.pdbx_synonyms' 9 5 'Structure model' '_database_2.pdbx_DOI' 10 5 'Structure model' '_database_2.pdbx_database_accession' 11 5 'Structure model' '_struct_ncs_dom_lim.beg_auth_comp_id' 12 5 'Structure model' '_struct_ncs_dom_lim.beg_label_asym_id' 13 5 'Structure model' '_struct_ncs_dom_lim.end_auth_comp_id' 14 5 'Structure model' '_struct_ncs_dom_lim.end_label_asym_id' # _database_PDB_caveat.id 1 _database_PDB_caveat.text 'LYS A 90 HAS WRONG CHIRALITY AT ATOM CA' # _pdbx_database_status.entry_id 2A5B _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2005-06-30 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Conners, R.' 1 'Hooley, E.' 2 'Thomas, S.' 3 'Brady, R.L.' 4 # _citation.id primary _citation.title 'Recognition of oxidatively modified bases within the biotin-binding site of avidin.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 357 _citation.page_first 263 _citation.page_last 274 _citation.year 2006 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16413579 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2005.12.054 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Conners, R.' 1 ? primary 'Hooley, E.' 2 ? primary 'Clarke, A.R.' 3 ? primary 'Thomas, S.' 4 ? primary 'Brady, R.L.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat Avidin 13862.557 2 ? ? ? ? 2 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 2 ? ? ? ? 3 non-polymer syn "2'-DEOXY-8-OXOGUANOSINE" 283.241 1 ? ? ? ? 4 water nat water 18.015 44 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;ARKCSLTGKWTNDLGSNMTIGAVNSRGEFTGTYTTAVTATSNEIKESPLHGTENTINKRTQPTFGFTVNWKFSESTTVFT GQCFIDRNGKEVLKTMWLLRSSVNDIGDDWKATRVGINIFTRLR ; _entity_poly.pdbx_seq_one_letter_code_can ;ARKCSLTGKWTNDLGSNMTIGAVNSRGEFTGTYTTAVTATSNEIKESPLHGTENTINKRTQPTFGFTVNWKFSESTTVFT GQCFIDRNGKEVLKTMWLLRSSVNDIGDDWKATRVGINIFTRLR ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 3 "2'-DEOXY-8-OXOGUANOSINE" 8HG 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 ARG n 1 3 LYS n 1 4 CYS n 1 5 SER n 1 6 LEU n 1 7 THR n 1 8 GLY n 1 9 LYS n 1 10 TRP n 1 11 THR n 1 12 ASN n 1 13 ASP n 1 14 LEU n 1 15 GLY n 1 16 SER n 1 17 ASN n 1 18 MET n 1 19 THR n 1 20 ILE n 1 21 GLY n 1 22 ALA n 1 23 VAL n 1 24 ASN n 1 25 SER n 1 26 ARG n 1 27 GLY n 1 28 GLU n 1 29 PHE n 1 30 THR n 1 31 GLY n 1 32 THR n 1 33 TYR n 1 34 THR n 1 35 THR n 1 36 ALA n 1 37 VAL n 1 38 THR n 1 39 ALA n 1 40 THR n 1 41 SER n 1 42 ASN n 1 43 GLU n 1 44 ILE n 1 45 LYS n 1 46 GLU n 1 47 SER n 1 48 PRO n 1 49 LEU n 1 50 HIS n 1 51 GLY n 1 52 THR n 1 53 GLU n 1 54 ASN n 1 55 THR n 1 56 ILE n 1 57 ASN n 1 58 LYS n 1 59 ARG n 1 60 THR n 1 61 GLN n 1 62 PRO n 1 63 THR n 1 64 PHE n 1 65 GLY n 1 66 PHE n 1 67 THR n 1 68 VAL n 1 69 ASN n 1 70 TRP n 1 71 LYS n 1 72 PHE n 1 73 SER n 1 74 GLU n 1 75 SER n 1 76 THR n 1 77 THR n 1 78 VAL n 1 79 PHE n 1 80 THR n 1 81 GLY n 1 82 GLN n 1 83 CYS n 1 84 PHE n 1 85 ILE n 1 86 ASP n 1 87 ARG n 1 88 ASN n 1 89 GLY n 1 90 LYS n 1 91 GLU n 1 92 VAL n 1 93 LEU n 1 94 LYS n 1 95 THR n 1 96 MET n 1 97 TRP n 1 98 LEU n 1 99 LEU n 1 100 ARG n 1 101 SER n 1 102 SER n 1 103 VAL n 1 104 ASN n 1 105 ASP n 1 106 ILE n 1 107 GLY n 1 108 ASP n 1 109 ASP n 1 110 TRP n 1 111 LYS n 1 112 ALA n 1 113 THR n 1 114 ARG n 1 115 VAL n 1 116 GLY n 1 117 ILE n 1 118 ASN n 1 119 ILE n 1 120 PHE n 1 121 THR n 1 122 ARG n 1 123 LEU n 1 124 ARG n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name chicken _entity_src_nat.pdbx_organism_scientific 'Gallus gallus' _entity_src_nat.pdbx_ncbi_taxonomy_id 9031 _entity_src_nat.genus Gallus _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details 'Egg white' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 8HG non-polymer . "2'-DEOXY-8-OXOGUANOSINE" ? 'C10 H13 N5 O5' 283.241 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 1 ALA ALA A . n A 1 2 ARG 2 2 2 ARG ARG A . n A 1 3 LYS 3 3 3 LYS LYS A . n A 1 4 CYS 4 4 4 CYS CYS A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 LEU 6 6 6 LEU LEU A . n A 1 7 THR 7 7 7 THR THR A . n A 1 8 GLY 8 8 8 GLY GLY A . n A 1 9 LYS 9 9 9 LYS LYS A . n A 1 10 TRP 10 10 10 TRP TRP A . n A 1 11 THR 11 11 11 THR THR A . n A 1 12 ASN 12 12 12 ASN ASN A . n A 1 13 ASP 13 13 13 ASP ASP A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 GLY 15 15 15 GLY GLY A . n A 1 16 SER 16 16 16 SER SER A . n A 1 17 ASN 17 17 17 ASN ASN A . n A 1 18 MET 18 18 18 MET MET A . n A 1 19 THR 19 19 19 THR THR A . n A 1 20 ILE 20 20 20 ILE ILE A . n A 1 21 GLY 21 21 21 GLY GLY A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 VAL 23 23 23 VAL VAL A . n A 1 24 ASN 24 24 24 ASN ASN A . n A 1 25 SER 25 25 25 SER SER A . n A 1 26 ARG 26 26 26 ARG ARG A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 GLU 28 28 28 GLU GLU A . n A 1 29 PHE 29 29 29 PHE PHE A . n A 1 30 THR 30 30 30 THR THR A . n A 1 31 GLY 31 31 31 GLY GLY A . n A 1 32 THR 32 32 32 THR THR A . n A 1 33 TYR 33 33 33 TYR TYR A . n A 1 34 THR 34 34 34 THR THR A . n A 1 35 THR 35 35 35 THR THR A . n A 1 36 ALA 36 36 36 ALA ALA A . n A 1 37 VAL 37 37 37 VAL VAL A . n A 1 38 THR 38 38 38 THR THR A . n A 1 39 ALA 39 39 39 ALA ALA A . n A 1 40 THR 40 40 40 THR THR A . n A 1 41 SER 41 41 41 SER SER A . n A 1 42 ASN 42 42 42 ASN ASN A . n A 1 43 GLU 43 43 43 GLU GLU A . n A 1 44 ILE 44 44 44 ILE ILE A . n A 1 45 LYS 45 45 45 LYS LYS A . n A 1 46 GLU 46 46 46 GLU GLU A . n A 1 47 SER 47 47 47 SER SER A . n A 1 48 PRO 48 48 48 PRO PRO A . n A 1 49 LEU 49 49 49 LEU LEU A . n A 1 50 HIS 50 50 50 HIS HIS A . n A 1 51 GLY 51 51 51 GLY GLY A . n A 1 52 THR 52 52 52 THR THR A . n A 1 53 GLU 53 53 53 GLU GLU A . n A 1 54 ASN 54 54 54 ASN ASN A . n A 1 55 THR 55 55 55 THR THR A . n A 1 56 ILE 56 56 56 ILE ILE A . n A 1 57 ASN 57 57 57 ASN ASN A . n A 1 58 LYS 58 58 58 LYS LYS A . n A 1 59 ARG 59 59 59 ARG ARG A . n A 1 60 THR 60 60 60 THR THR A . n A 1 61 GLN 61 61 61 GLN GLN A . n A 1 62 PRO 62 62 62 PRO PRO A . n A 1 63 THR 63 63 63 THR THR A . n A 1 64 PHE 64 64 64 PHE PHE A . n A 1 65 GLY 65 65 65 GLY GLY A . n A 1 66 PHE 66 66 66 PHE PHE A . n A 1 67 THR 67 67 67 THR THR A . n A 1 68 VAL 68 68 68 VAL VAL A . n A 1 69 ASN 69 69 69 ASN ASN A . n A 1 70 TRP 70 70 70 TRP TRP A . n A 1 71 LYS 71 71 71 LYS LYS A . n A 1 72 PHE 72 72 72 PHE PHE A . n A 1 73 SER 73 73 73 SER SER A . n A 1 74 GLU 74 74 74 GLU GLU A . n A 1 75 SER 75 75 75 SER SER A . n A 1 76 THR 76 76 76 THR THR A . n A 1 77 THR 77 77 77 THR THR A . n A 1 78 VAL 78 78 78 VAL VAL A . n A 1 79 PHE 79 79 79 PHE PHE A . n A 1 80 THR 80 80 80 THR THR A . n A 1 81 GLY 81 81 81 GLY GLY A . n A 1 82 GLN 82 82 82 GLN GLN A . n A 1 83 CYS 83 83 83 CYS CYS A . n A 1 84 PHE 84 84 84 PHE PHE A . n A 1 85 ILE 85 85 85 ILE ILE A . n A 1 86 ASP 86 86 86 ASP ASP A . n A 1 87 ARG 87 87 87 ARG ARG A . n A 1 88 ASN 88 88 88 ASN ASN A . n A 1 89 GLY 89 89 89 GLY GLY A . n A 1 90 LYS 90 90 90 LYS LYS A . n A 1 91 GLU 91 91 91 GLU GLU A . n A 1 92 VAL 92 92 92 VAL VAL A . n A 1 93 LEU 93 93 93 LEU LEU A . n A 1 94 LYS 94 94 94 LYS LYS A . n A 1 95 THR 95 95 95 THR THR A . n A 1 96 MET 96 96 96 MET MET A . n A 1 97 TRP 97 97 97 TRP TRP A . n A 1 98 LEU 98 98 98 LEU LEU A . n A 1 99 LEU 99 99 99 LEU LEU A . n A 1 100 ARG 100 100 100 ARG ARG A . n A 1 101 SER 101 101 101 SER SER A . n A 1 102 SER 102 102 102 SER SER A . n A 1 103 VAL 103 103 103 VAL VAL A . n A 1 104 ASN 104 104 104 ASN ASN A . n A 1 105 ASP 105 105 105 ASP ASP A . n A 1 106 ILE 106 106 106 ILE ILE A . n A 1 107 GLY 107 107 107 GLY GLY A . n A 1 108 ASP 108 108 108 ASP ASP A . n A 1 109 ASP 109 109 109 ASP ASP A . n A 1 110 TRP 110 110 110 TRP TRP A . n A 1 111 LYS 111 111 111 LYS LYS A . n A 1 112 ALA 112 112 112 ALA ALA A . n A 1 113 THR 113 113 113 THR THR A . n A 1 114 ARG 114 114 114 ARG ARG A . n A 1 115 VAL 115 115 115 VAL VAL A . n A 1 116 GLY 116 116 116 GLY GLY A . n A 1 117 ILE 117 117 117 ILE ILE A . n A 1 118 ASN 118 118 118 ASN ASN A . n A 1 119 ILE 119 119 119 ILE ILE A . n A 1 120 PHE 120 120 120 PHE PHE A . n A 1 121 THR 121 121 121 THR THR A . n A 1 122 ARG 122 122 122 ARG ARG A . n A 1 123 LEU 123 123 123 LEU LEU A . n A 1 124 ARG 124 124 124 ARG ARG A . n B 1 1 ALA 1 1 1 ALA ALA B . n B 1 2 ARG 2 2 2 ARG ARG B . n B 1 3 LYS 3 3 3 LYS LYS B . n B 1 4 CYS 4 4 4 CYS CYS B . n B 1 5 SER 5 5 5 SER SER B . n B 1 6 LEU 6 6 6 LEU LEU B . n B 1 7 THR 7 7 7 THR THR B . n B 1 8 GLY 8 8 8 GLY GLY B . n B 1 9 LYS 9 9 9 LYS LYS B . n B 1 10 TRP 10 10 10 TRP TRP B . n B 1 11 THR 11 11 11 THR THR B . n B 1 12 ASN 12 12 12 ASN ASN B . n B 1 13 ASP 13 13 13 ASP ASP B . n B 1 14 LEU 14 14 14 LEU LEU B . n B 1 15 GLY 15 15 15 GLY GLY B . n B 1 16 SER 16 16 16 SER SER B . n B 1 17 ASN 17 17 17 ASN ASN B . n B 1 18 MET 18 18 18 MET MET B . n B 1 19 THR 19 19 19 THR THR B . n B 1 20 ILE 20 20 20 ILE ILE B . n B 1 21 GLY 21 21 21 GLY GLY B . n B 1 22 ALA 22 22 22 ALA ALA B . n B 1 23 VAL 23 23 23 VAL VAL B . n B 1 24 ASN 24 24 24 ASN ASN B . n B 1 25 SER 25 25 25 SER SER B . n B 1 26 ARG 26 26 26 ARG ARG B . n B 1 27 GLY 27 27 27 GLY GLY B . n B 1 28 GLU 28 28 28 GLU GLU B . n B 1 29 PHE 29 29 29 PHE PHE B . n B 1 30 THR 30 30 30 THR THR B . n B 1 31 GLY 31 31 31 GLY GLY B . n B 1 32 THR 32 32 32 THR THR B . n B 1 33 TYR 33 33 33 TYR TYR B . n B 1 34 THR 34 34 34 THR THR B . n B 1 35 THR 35 35 35 THR THR B . n B 1 36 ALA 36 36 36 ALA ALA B . n B 1 37 VAL 37 37 37 VAL VAL B . n B 1 38 THR 38 38 38 THR THR B . n B 1 39 ALA 39 39 39 ALA ALA B . n B 1 40 THR 40 40 40 THR THR B . n B 1 41 SER 41 41 41 SER SER B . n B 1 42 ASN 42 42 42 ASN ASN B . n B 1 43 GLU 43 43 43 GLU GLU B . n B 1 44 ILE 44 44 44 ILE ILE B . n B 1 45 LYS 45 45 45 LYS LYS B . n B 1 46 GLU 46 46 46 GLU GLU B . n B 1 47 SER 47 47 47 SER SER B . n B 1 48 PRO 48 48 48 PRO PRO B . n B 1 49 LEU 49 49 49 LEU LEU B . n B 1 50 HIS 50 50 50 HIS HIS B . n B 1 51 GLY 51 51 51 GLY GLY B . n B 1 52 THR 52 52 52 THR THR B . n B 1 53 GLU 53 53 53 GLU GLU B . n B 1 54 ASN 54 54 54 ASN ASN B . n B 1 55 THR 55 55 55 THR THR B . n B 1 56 ILE 56 56 56 ILE ILE B . n B 1 57 ASN 57 57 57 ASN ASN B . n B 1 58 LYS 58 58 58 LYS LYS B . n B 1 59 ARG 59 59 59 ARG ARG B . n B 1 60 THR 60 60 60 THR THR B . n B 1 61 GLN 61 61 61 GLN GLN B . n B 1 62 PRO 62 62 62 PRO PRO B . n B 1 63 THR 63 63 63 THR THR B . n B 1 64 PHE 64 64 64 PHE PHE B . n B 1 65 GLY 65 65 65 GLY GLY B . n B 1 66 PHE 66 66 66 PHE PHE B . n B 1 67 THR 67 67 67 THR THR B . n B 1 68 VAL 68 68 68 VAL VAL B . n B 1 69 ASN 69 69 69 ASN ASN B . n B 1 70 TRP 70 70 70 TRP TRP B . n B 1 71 LYS 71 71 71 LYS LYS B . n B 1 72 PHE 72 72 72 PHE PHE B . n B 1 73 SER 73 73 73 SER SER B . n B 1 74 GLU 74 74 74 GLU GLU B . n B 1 75 SER 75 75 75 SER SER B . n B 1 76 THR 76 76 76 THR THR B . n B 1 77 THR 77 77 77 THR THR B . n B 1 78 VAL 78 78 78 VAL VAL B . n B 1 79 PHE 79 79 79 PHE PHE B . n B 1 80 THR 80 80 80 THR THR B . n B 1 81 GLY 81 81 81 GLY GLY B . n B 1 82 GLN 82 82 82 GLN GLN B . n B 1 83 CYS 83 83 83 CYS CYS B . n B 1 84 PHE 84 84 84 PHE PHE B . n B 1 85 ILE 85 85 85 ILE ILE B . n B 1 86 ASP 86 86 86 ASP ASP B . n B 1 87 ARG 87 87 87 ARG ARG B . n B 1 88 ASN 88 88 88 ASN ASN B . n B 1 89 GLY 89 89 89 GLY GLY B . n B 1 90 LYS 90 90 90 LYS LYS B . n B 1 91 GLU 91 91 91 GLU GLU B . n B 1 92 VAL 92 92 92 VAL VAL B . n B 1 93 LEU 93 93 93 LEU LEU B . n B 1 94 LYS 94 94 94 LYS LYS B . n B 1 95 THR 95 95 95 THR THR B . n B 1 96 MET 96 96 96 MET MET B . n B 1 97 TRP 97 97 97 TRP TRP B . n B 1 98 LEU 98 98 98 LEU LEU B . n B 1 99 LEU 99 99 99 LEU LEU B . n B 1 100 ARG 100 100 100 ARG ARG B . n B 1 101 SER 101 101 101 SER SER B . n B 1 102 SER 102 102 102 SER SER B . n B 1 103 VAL 103 103 103 VAL VAL B . n B 1 104 ASN 104 104 104 ASN ASN B . n B 1 105 ASP 105 105 105 ASP ASP B . n B 1 106 ILE 106 106 106 ILE ILE B . n B 1 107 GLY 107 107 107 GLY GLY B . n B 1 108 ASP 108 108 108 ASP ASP B . n B 1 109 ASP 109 109 109 ASP ASP B . n B 1 110 TRP 110 110 110 TRP TRP B . n B 1 111 LYS 111 111 111 LYS LYS B . n B 1 112 ALA 112 112 112 ALA ALA B . n B 1 113 THR 113 113 113 THR THR B . n B 1 114 ARG 114 114 114 ARG ARG B . n B 1 115 VAL 115 115 115 VAL VAL B . n B 1 116 GLY 116 116 116 GLY GLY B . n B 1 117 ILE 117 117 117 ILE ILE B . n B 1 118 ASN 118 118 118 ASN ASN B . n B 1 119 ILE 119 119 119 ILE ILE B . n B 1 120 PHE 120 120 120 PHE PHE B . n B 1 121 THR 121 121 121 THR THR B . n B 1 122 ARG 122 122 122 ARG ARG B . n B 1 123 LEU 123 123 123 LEU LEU B . n B 1 124 ARG 124 124 124 ARG ARG B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAG 1 201 201 NAG NAG A . D 3 8HG 1 255 255 8HG 8HG A . E 2 NAG 1 201 201 NAG NAG B . F 4 HOH 1 256 2 HOH HOH A . F 4 HOH 2 257 5 HOH HOH A . F 4 HOH 3 258 7 HOH HOH A . F 4 HOH 4 259 8 HOH HOH A . F 4 HOH 5 260 10 HOH HOH A . F 4 HOH 6 261 11 HOH HOH A . F 4 HOH 7 262 16 HOH HOH A . F 4 HOH 8 263 21 HOH HOH A . F 4 HOH 9 264 22 HOH HOH A . F 4 HOH 10 265 24 HOH HOH A . F 4 HOH 11 266 25 HOH HOH A . F 4 HOH 12 267 26 HOH HOH A . F 4 HOH 13 268 28 HOH HOH A . F 4 HOH 14 269 46 HOH HOH A . F 4 HOH 15 270 50 HOH HOH A . F 4 HOH 16 271 51 HOH HOH A . F 4 HOH 17 272 53 HOH HOH A . F 4 HOH 18 273 54 HOH HOH A . F 4 HOH 19 274 65 HOH HOH A . G 4 HOH 1 202 1 HOH HOH B . G 4 HOH 2 203 4 HOH HOH B . G 4 HOH 3 204 6 HOH HOH B . G 4 HOH 4 205 12 HOH HOH B . G 4 HOH 5 206 13 HOH HOH B . G 4 HOH 6 207 14 HOH HOH B . G 4 HOH 7 208 15 HOH HOH B . G 4 HOH 8 209 19 HOH HOH B . G 4 HOH 9 210 20 HOH HOH B . G 4 HOH 10 211 27 HOH HOH B . G 4 HOH 11 212 31 HOH HOH B . G 4 HOH 12 213 34 HOH HOH B . G 4 HOH 13 214 35 HOH HOH B . G 4 HOH 14 215 38 HOH HOH B . G 4 HOH 15 216 40 HOH HOH B . G 4 HOH 16 217 41 HOH HOH B . G 4 HOH 17 218 52 HOH HOH B . G 4 HOH 18 219 56 HOH HOH B . G 4 HOH 19 220 57 HOH HOH B . G 4 HOH 20 221 60 HOH HOH B . G 4 HOH 21 222 61 HOH HOH B . G 4 HOH 22 223 62 HOH HOH B . G 4 HOH 23 224 63 HOH HOH B . G 4 HOH 24 225 64 HOH HOH B . G 4 HOH 25 226 66 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A LYS 3 ? CB ? A LYS 3 CB 2 1 Y 0 A LYS 3 ? CG ? A LYS 3 CG 3 1 Y 0 A LYS 3 ? CD ? A LYS 3 CD 4 1 Y 0 A LYS 3 ? CE ? A LYS 3 CE 5 1 Y 0 A LYS 3 ? NZ ? A LYS 3 NZ 6 1 Y 0 A LYS 9 ? CG ? A LYS 9 CG 7 1 Y 0 A LYS 9 ? CD ? A LYS 9 CD 8 1 Y 0 A LYS 9 ? CE ? A LYS 9 CE 9 1 Y 0 A LYS 9 ? NZ ? A LYS 9 NZ 10 1 Y 0 A ARG 26 ? CD ? A ARG 26 CD 11 1 Y 0 A ARG 26 ? NE ? A ARG 26 NE 12 1 Y 0 A ARG 26 ? CZ ? A ARG 26 CZ 13 1 Y 0 A ARG 26 ? NH1 ? A ARG 26 NH1 14 1 Y 0 A ARG 26 ? NH2 ? A ARG 26 NH2 15 1 Y 0 A LYS 58 ? CB ? A LYS 58 CB 16 1 Y 0 A LYS 58 ? CG ? A LYS 58 CG 17 1 Y 0 A LYS 58 ? CD ? A LYS 58 CD 18 1 Y 0 A LYS 58 ? CE ? A LYS 58 CE 19 1 Y 0 A LYS 58 ? NZ ? A LYS 58 NZ 20 1 Y 0 A LYS 90 ? CB ? A LYS 90 CB 21 1 Y 0 A LYS 90 ? CG ? A LYS 90 CG 22 1 Y 0 A LYS 90 ? CD ? A LYS 90 CD 23 1 Y 0 A LYS 90 ? CE ? A LYS 90 CE 24 1 Y 0 A LYS 90 ? NZ ? A LYS 90 NZ 25 1 Y 0 B LYS 3 ? CG ? B LYS 3 CG 26 1 Y 0 B LYS 3 ? CD ? B LYS 3 CD 27 1 Y 0 B LYS 3 ? CE ? B LYS 3 CE 28 1 Y 0 B LYS 3 ? NZ ? B LYS 3 NZ 29 1 Y 0 B LYS 9 ? CE ? B LYS 9 CE 30 1 Y 0 B LYS 9 ? NZ ? B LYS 9 NZ 31 1 Y 0 B LEU 14 ? CB ? B LEU 14 CB 32 1 Y 0 B LEU 14 ? CG ? B LEU 14 CG 33 1 Y 0 B LEU 14 ? CD1 ? B LEU 14 CD1 34 1 Y 0 B LEU 14 ? CD2 ? B LEU 14 CD2 35 1 Y 0 B LYS 45 ? CD ? B LYS 45 CD 36 1 Y 0 B LYS 45 ? CE ? B LYS 45 CE 37 1 Y 0 B LYS 45 ? NZ ? B LYS 45 NZ 38 1 Y 0 B LYS 58 ? CB ? B LYS 58 CB 39 1 Y 0 B LYS 58 ? CG ? B LYS 58 CG 40 1 Y 0 B LYS 58 ? CD ? B LYS 58 CD 41 1 Y 0 B LYS 58 ? CE ? B LYS 58 CE 42 1 Y 0 B LYS 58 ? NZ ? B LYS 58 NZ 43 1 Y 0 B ARG 59 ? CB ? B ARG 59 CB 44 1 Y 0 B ARG 59 ? CG ? B ARG 59 CG 45 1 Y 0 B ARG 59 ? CD ? B ARG 59 CD 46 1 Y 0 B ARG 59 ? NE ? B ARG 59 NE 47 1 Y 0 B ARG 59 ? CZ ? B ARG 59 CZ 48 1 Y 0 B ARG 59 ? NH1 ? B ARG 59 NH1 49 1 Y 0 B ARG 59 ? NH2 ? B ARG 59 NH2 50 1 Y 0 B LYS 71 ? CB ? B LYS 71 CB 51 1 Y 0 B LYS 71 ? CG ? B LYS 71 CG 52 1 Y 0 B LYS 71 ? CD ? B LYS 71 CD 53 1 Y 0 B LYS 71 ? CE ? B LYS 71 CE 54 1 Y 0 B LYS 71 ? NZ ? B LYS 71 NZ 55 1 Y 0 B LYS 90 ? CD ? B LYS 90 CD 56 1 Y 0 B LYS 90 ? CE ? B LYS 90 CE 57 1 Y 0 B LYS 90 ? NZ ? B LYS 90 NZ 58 1 Y 0 B ARG 124 ? CB ? B ARG 124 CB 59 1 Y 0 B ARG 124 ? CG ? B ARG 124 CG 60 1 Y 0 B ARG 124 ? CD ? B ARG 124 CD 61 1 Y 0 B ARG 124 ? NE ? B ARG 124 NE 62 1 Y 0 B ARG 124 ? CZ ? B ARG 124 CZ 63 1 Y 0 B ARG 124 ? NH1 ? B ARG 124 NH1 64 1 Y 0 B ARG 124 ? NH2 ? B ARG 124 NH2 # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.2.0005 ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran ? 1 PDB_EXTRACT 1.700 'May. 30, 2005' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 2 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 3 SCALEPACK . ? ? ? ? 'data scaling' ? ? ? 4 AMoRE . ? ? ? ? phasing ? ? ? 5 # _cell.entry_id 2A5B _cell.length_a 70.019 _cell.length_b 79.487 _cell.length_c 42.909 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2A5B _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? # _exptl.entry_id 2A5B _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.1 _exptl_crystal.density_percent_sol 40.4 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 290.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.pdbx_details 'PEG 8000, Sodium Citrate, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 290.0K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2004-05-18 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111 Monochromator' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9795 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SRS BEAMLINE PX14.2' _diffrn_source.pdbx_synchrotron_site SRS _diffrn_source.pdbx_synchrotron_beamline PX14.2 _diffrn_source.pdbx_wavelength 0.9795 _diffrn_source.pdbx_wavelength_list 0.9795 # _reflns.entry_id 2A5B _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F 2.0 _reflns.d_resolution_low 52.7 _reflns.d_resolution_high 2.49 _reflns.number_obs 8270 _reflns.number_all 8683 _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs 0.076 _reflns.pdbx_Rsym_value 0.076 _reflns.pdbx_netI_over_sigmaI 23.5 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.49 _reflns_shell.d_res_low 2.59 _reflns_shell.percent_possible_all 96.3 _reflns_shell.Rmerge_I_obs 0.42 _reflns_shell.pdbx_Rsym_value 0.41 _reflns_shell.meanI_over_sigI_obs 3.1 _reflns_shell.pdbx_redundancy 6.2 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2A5B _refine.ls_number_reflns_obs 8270 _refine.ls_number_reflns_all 8683 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 52.70 _refine.ls_d_res_high 2.49 _refine.ls_percent_reflns_obs 98.49 _refine.ls_R_factor_obs 0.22331 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.21905 _refine.ls_R_factor_R_free 0.31007 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 413 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.921 _refine.correlation_coeff_Fo_to_Fc_free 0.842 _refine.B_iso_mean 35.168 _refine.aniso_B[1][1] 1.90 _refine.aniso_B[2][2] -1.56 _refine.aniso_B[3][3] -0.34 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 1IJ8 _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model Isotropic _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 1.296 _refine.pdbx_overall_ESU_R_Free 0.386 _refine.overall_SU_ML 0.250 _refine.overall_SU_B 10.983 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1948 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 48 _refine_hist.number_atoms_solvent 44 _refine_hist.number_atoms_total 2040 _refine_hist.d_res_high 2.49 _refine_hist.d_res_low 52.70 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.019 0.021 ? 1974 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.994 1.940 ? 2689 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.755 5.000 ? 246 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 31.901 23.882 ? 85 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 19.048 15.000 ? 298 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 20.315 15.000 ? 13 'X-RAY DIFFRACTION' ? r_chiral_restr 0.124 0.200 ? 310 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.007 0.020 ? 1484 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.227 0.200 ? 783 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.317 0.200 ? 1312 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.161 0.200 ? 87 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.222 0.200 ? 22 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.035 0.200 ? 2 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.210 1.500 ? 1243 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2.070 2.000 ? 1960 'X-RAY DIFFRACTION' ? r_scbond_it 2.462 3.000 ? 862 'X-RAY DIFFRACTION' ? r_scangle_it 3.943 4.500 ? 729 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight 1 A 352 0.07 0.05 'tight positional' 1 'X-RAY DIFFRACTION' 1 ? ? ? ? ? ? 1 A 312 0.24 5.00 'loose positional' 1 'X-RAY DIFFRACTION' 2 ? ? ? ? ? ? 1 A 14 0.30 5.00 'loose positional' 2 'X-RAY DIFFRACTION' 3 ? ? ? ? ? ? 1 A 352 0.29 0.50 'tight thermal' 1 'X-RAY DIFFRACTION' 4 ? ? ? ? ? ? 1 A 312 2.14 10.00 'loose thermal' 1 'X-RAY DIFFRACTION' 5 ? ? ? ? ? ? 1 A 14 5.30 10.00 'loose thermal' 2 'X-RAY DIFFRACTION' 6 ? ? ? ? ? ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.49 _refine_ls_shell.d_res_low 2.557 _refine_ls_shell.number_reflns_R_work 565 _refine_ls_shell.R_factor_R_work 0.34 _refine_ls_shell.percent_reflns_obs 95.51 _refine_ls_shell.R_factor_R_free 0.39 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 31 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _struct_ncs_dom.pdbx_ens_id _struct_ncs_dom.id _struct_ncs_dom.details 1 1 A 1 2 B 1 3 A 1 4 B 1 5 A 1 6 B 1 7 A 1 8 B 1 9 A 1 10 B 2 1 A 2 2 B # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_comp_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.selection_details 1 1 1 A CYS 4 . A THR 34 . A CYS 4 A THR 34 3 ? 1 2 1 B CYS 4 . B THR 34 . B CYS 4 B THR 34 3 ? 1 3 2 A SER 47 . A LYS 58 . A SER 47 A LYS 58 3 ? 1 4 2 B SER 47 . B LYS 58 . B SER 47 B LYS 58 3 ? 1 5 3 A THR 63 . A CYS 83 . A THR 63 A CYS 83 3 ? 1 6 3 B THR 63 . B CYS 83 . B THR 63 B CYS 83 3 ? 1 7 4 A GLU 91 . A VAL 103 . A GLU 91 A VAL 103 3 ? 1 8 4 B GLU 91 . B VAL 103 . B GLU 91 B VAL 103 3 ? 1 9 5 A TRP 110 . A PHE 120 . A TRP 110 A PHE 120 3 ? 1 10 5 B TRP 110 . B PHE 120 . B TRP 110 B PHE 120 3 ? 2 1 1 C NAG . . C NAG . . A NAG 201 A NAG 201 3 ? 2 2 1 E NAG . . E NAG . . B NAG 201 B NAG 201 3 ? # loop_ _struct_ncs_ens.id _struct_ncs_ens.details 1 ? 2 ? # _struct.entry_id 2A5B _struct.title 'Avidin complexed with 8-oxodeoxyguanosine' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2A5B _struct_keywords.pdbx_keywords 'UNKNOWN FUNCTION' _struct_keywords.text 'Avidin, Damaged DNA, 8-oxodeoxyguanosine, UNKNOWN FUNCTION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 2 ? F N N 4 ? G N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code AVID_CHICK _struct_ref.pdbx_db_accession P02701 _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin 25 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2A5B A 1 ? 124 ? P02701 25 ? 148 ? 1 124 2 1 2A5B B 1 ? 124 ? P02701 25 ? 148 ? 1 124 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2A5B THR A 34 ? UNP P02701 ILE 58 variant 34 1 2 2A5B THR B 34 ? UNP P02701 ILE 58 variant 34 2 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 12310 ? 1 MORE -23 ? 1 'SSA (A^2)' 22370 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_565 -x,-y+1,z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 79.4870000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 105 ? LYS A 111 ? ASP A 105 LYS A 111 5 ? 7 HELX_P HELX_P2 2 THR B 55 ? ARG B 59 ? THR B 55 ARG B 59 5 ? 5 HELX_P HELX_P3 3 ASP B 108 ? LYS B 111 ? ASP B 108 LYS B 111 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 4 SG ? ? ? 1_555 A CYS 83 SG ? ? A CYS 4 A CYS 83 1_555 ? ? ? ? ? ? ? 2.045 ? ? disulf2 disulf ? ? B CYS 4 SG ? ? ? 1_555 B CYS 83 SG ? ? B CYS 4 B CYS 83 1_555 ? ? ? ? ? ? ? 2.019 ? ? covale1 covale one ? A ASN 17 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 17 A NAG 201 1_555 ? ? ? ? ? ? ? 1.453 ? N-Glycosylation covale2 covale one ? B ASN 17 ND2 ? ? ? 1_555 E NAG . C1 ? ? B ASN 17 B NAG 201 1_555 ? ? ? ? ? ? ? 1.445 ? N-Glycosylation # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 NAG C . ? ASN A 17 ? NAG A 201 ? 1_555 ASN A 17 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 2 NAG E . ? ASN B 17 ? NAG B 201 ? 1_555 ASN B 17 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 3 CYS A 4 ? CYS A 83 ? CYS A 4 ? 1_555 CYS A 83 ? 1_555 SG SG . . . None 'Disulfide bridge' 4 CYS B 4 ? CYS B 83 ? CYS B 4 ? 1_555 CYS B 83 ? 1_555 SG SG . . . None 'Disulfide bridge' # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ASN _struct_mon_prot_cis.label_seq_id 88 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ASN _struct_mon_prot_cis.auth_seq_id 88 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 GLY _struct_mon_prot_cis.pdbx_label_seq_id_2 89 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 GLY _struct_mon_prot_cis.pdbx_auth_seq_id_2 89 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 4.48 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 9 ? B ? 9 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel A 8 9 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel B 7 8 ? anti-parallel B 8 9 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY A 8 ? ASN A 12 ? GLY A 8 ASN A 12 A 2 ASN A 17 ? ILE A 20 ? ASN A 17 ILE A 20 A 3 GLU A 28 ? ALA A 36 ? GLU A 28 ALA A 36 A 4 ILE A 44 ? GLU A 53 ? ILE A 44 GLU A 53 A 5 THR A 63 ? ASN A 69 ? THR A 63 ASN A 69 A 6 THR A 76 ? ILE A 85 ? THR A 76 ILE A 85 A 7 GLU A 91 ? ARG A 100 ? GLU A 91 ARG A 100 A 8 THR A 113 ? ARG A 122 ? THR A 113 ARG A 122 A 9 GLY A 8 ? ASN A 12 ? GLY A 8 ASN A 12 B 1 GLY B 8 ? ASN B 12 ? GLY B 8 ASN B 12 B 2 ASN B 17 ? ILE B 20 ? ASN B 17 ILE B 20 B 3 GLU B 28 ? ALA B 36 ? GLU B 28 ALA B 36 B 4 ILE B 44 ? GLU B 53 ? ILE B 44 GLU B 53 B 5 THR B 63 ? ASN B 69 ? THR B 63 ASN B 69 B 6 THR B 76 ? ILE B 85 ? THR B 76 ILE B 85 B 7 GLU B 91 ? ARG B 100 ? GLU B 91 ARG B 100 B 8 THR B 113 ? ARG B 122 ? THR B 113 ARG B 122 B 9 GLY B 8 ? ASN B 12 ? GLY B 8 ASN B 12 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TRP A 10 ? N TRP A 10 O MET A 18 ? O MET A 18 A 2 3 N ASN A 17 ? N ASN A 17 O THR A 34 ? O THR A 34 A 3 4 N TYR A 33 ? N TYR A 33 O SER A 47 ? O SER A 47 A 4 5 N HIS A 50 ? N HIS A 50 O THR A 67 ? O THR A 67 A 5 6 N VAL A 68 ? N VAL A 68 O THR A 77 ? O THR A 77 A 6 7 N THR A 76 ? N THR A 76 O ARG A 100 ? O ARG A 100 A 7 8 N LEU A 99 ? N LEU A 99 O ARG A 114 ? O ARG A 114 A 8 9 O THR A 121 ? O THR A 121 N THR A 11 ? N THR A 11 B 1 2 N TRP B 10 ? N TRP B 10 O MET B 18 ? O MET B 18 B 2 3 N ASN B 17 ? N ASN B 17 O THR B 34 ? O THR B 34 B 3 4 N PHE B 29 ? N PHE B 29 O GLY B 51 ? O GLY B 51 B 4 5 N HIS B 50 ? N HIS B 50 O THR B 67 ? O THR B 67 B 5 6 N VAL B 68 ? N VAL B 68 O THR B 77 ? O THR B 77 B 6 7 N PHE B 84 ? N PHE B 84 O VAL B 92 ? O VAL B 92 B 7 8 N THR B 95 ? N THR B 95 O ASN B 118 ? O ASN B 118 B 8 9 O THR B 121 ? O THR B 121 N THR B 11 ? N THR B 11 # _pdbx_entry_details.entry_id 2A5B _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CG A ARG 26 ? ? CD A ARG 26 ? ? 1.300 1.515 -0.215 0.025 N 2 1 CA A LYS 58 ? ? CB A LYS 58 ? ? 1.383 1.535 -0.152 0.022 N 3 1 CA A LYS 90 ? ? CB A LYS 90 ? ? 1.309 1.535 -0.226 0.022 N 4 1 CD B LYS 9 ? ? CE B LYS 9 ? ? 1.242 1.508 -0.266 0.025 N 5 1 CA B LYS 71 ? ? CB B LYS 71 ? ? 1.345 1.535 -0.190 0.022 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA A LEU 49 ? ? CB A LEU 49 ? ? CG A LEU 49 ? ? 132.83 115.30 17.53 2.30 N 2 1 N A LYS 90 ? ? CA A LYS 90 ? ? CB A LYS 90 ? ? 138.30 110.60 27.70 1.80 N 3 1 CA A LYS 90 ? ? CB A LYS 90 ? ? CG A LYS 90 ? ? 134.81 113.40 21.41 2.20 N 4 1 CA B LYS 3 ? ? CB B LYS 3 ? ? CG B LYS 3 ? ? 127.69 113.40 14.29 2.20 N 5 1 CB B LYS 45 ? ? CG B LYS 45 ? ? CD B LYS 45 ? ? 145.70 111.60 34.10 2.60 N 6 1 CG B LYS 45 ? ? CD B LYS 45 ? ? CE B LYS 45 ? ? 134.83 111.90 22.93 3.00 N 7 1 CA B LEU 49 ? ? CB B LEU 49 ? ? CG B LEU 49 ? ? 133.44 115.30 18.14 2.30 N 8 1 CB B LYS 90 ? ? CG B LYS 90 ? ? CD B LYS 90 ? ? 95.65 111.60 -15.95 2.60 N 9 1 N B ARG 124 ? ? CA B ARG 124 ? ? CB B ARG 124 ? ? 85.16 110.60 -25.44 1.80 N 10 1 CA B ARG 124 ? ? CB B ARG 124 ? ? CG B ARG 124 ? ? 144.29 113.40 30.89 2.20 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 2 ? ? -65.85 84.44 2 1 ASN A 24 ? ? -68.51 -172.63 3 1 THR A 38 ? ? 134.56 -152.11 4 1 THR A 40 ? ? 81.34 85.97 5 1 SER A 41 ? ? 151.19 -11.90 6 1 ASN A 42 ? ? -116.02 -80.37 7 1 ASN A 57 ? ? 71.41 31.14 8 1 LYS A 58 ? ? 25.01 47.89 9 1 ASP A 86 ? ? -65.82 -178.20 10 1 ARG A 87 ? ? -38.48 -108.57 11 1 ASN A 88 ? ? -154.58 70.72 12 1 LYS A 90 ? ? -66.04 -179.05 13 1 VAL B 37 ? ? -109.12 -148.40 14 1 THR B 38 ? ? 21.88 -118.57 15 1 ALA B 39 ? ? -95.58 33.61 16 1 THR B 40 ? ? 39.07 82.37 17 1 SER B 41 ? ? -154.70 -30.38 18 1 ASN B 42 ? ? -134.54 -63.16 19 1 LYS B 58 ? ? 28.74 35.65 20 1 ARG B 59 ? ? -45.50 155.07 21 1 ILE B 106 ? ? -54.84 -9.74 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 ARG _pdbx_validate_peptide_omega.auth_asym_id_1 A _pdbx_validate_peptide_omega.auth_seq_id_1 59 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 THR _pdbx_validate_peptide_omega.auth_asym_id_2 A _pdbx_validate_peptide_omega.auth_seq_id_2 60 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega 148.02 # _pdbx_validate_chiral.id 1 _pdbx_validate_chiral.PDB_model_num 1 _pdbx_validate_chiral.auth_atom_id CA _pdbx_validate_chiral.label_alt_id ? _pdbx_validate_chiral.auth_asym_id A _pdbx_validate_chiral.auth_comp_id LYS _pdbx_validate_chiral.auth_seq_id 90 _pdbx_validate_chiral.PDB_ins_code ? _pdbx_validate_chiral.details PLANAR _pdbx_validate_chiral.omega . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ASN 17 A ASN 17 ? ASN 'GLYCOSYLATION SITE' 2 B ASN 17 B ASN 17 ? ASN 'GLYCOSYLATION SITE' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 8HG O6 O N N 1 8HG C6 C N N 2 8HG N1 N N N 3 8HG C2 C N N 4 8HG N2 N N N 5 8HG N3 N N N 6 8HG C4 C N N 7 8HG C5 C N N 8 8HG N7 N N N 9 8HG C8 C N N 10 8HG O20 O N N 11 8HG N9 N N N 12 8HG "C1'" C N R 13 8HG "O4'" O N N 14 8HG "C2'" C N N 15 8HG "C3'" C N S 16 8HG "O3'" O N N 17 8HG "C4'" C N R 18 8HG "C5'" C N N 19 8HG "O5'" O N N 20 8HG HN1 H N N 21 8HG HN21 H N N 22 8HG HN22 H N N 23 8HG "H1'" H N N 24 8HG "H2'1" H N N 25 8HG "H2'2" H N N 26 8HG "H3'" H N N 27 8HG H1 H N N 28 8HG "H4'" H N N 29 8HG "H5'1" H N N 30 8HG "H5'2" H N N 31 8HG "H5'" H N N 32 8HG H13 H N N 33 ALA N N N N 34 ALA CA C N S 35 ALA C C N N 36 ALA O O N N 37 ALA CB C N N 38 ALA OXT O N N 39 ALA H H N N 40 ALA H2 H N N 41 ALA HA H N N 42 ALA HB1 H N N 43 ALA HB2 H N N 44 ALA HB3 H N N 45 ALA HXT H N N 46 ARG N N N N 47 ARG CA C N S 48 ARG C C N N 49 ARG O O N N 50 ARG CB C N N 51 ARG CG C N N 52 ARG CD C N N 53 ARG NE N N N 54 ARG CZ C N N 55 ARG NH1 N N N 56 ARG NH2 N N N 57 ARG OXT O N N 58 ARG H H N N 59 ARG H2 H N N 60 ARG HA H N N 61 ARG HB2 H N N 62 ARG HB3 H N N 63 ARG HG2 H N N 64 ARG HG3 H N N 65 ARG HD2 H N N 66 ARG HD3 H N N 67 ARG HE H N N 68 ARG HH11 H N N 69 ARG HH12 H N N 70 ARG HH21 H N N 71 ARG HH22 H N N 72 ARG HXT H N N 73 ASN N N N N 74 ASN CA C N S 75 ASN C C N N 76 ASN O O N N 77 ASN CB C N N 78 ASN CG C N N 79 ASN OD1 O N N 80 ASN ND2 N N N 81 ASN OXT O N N 82 ASN H H N N 83 ASN H2 H N N 84 ASN HA H N N 85 ASN HB2 H N N 86 ASN HB3 H N N 87 ASN HD21 H N N 88 ASN HD22 H N N 89 ASN HXT H N N 90 ASP N N N N 91 ASP CA C N S 92 ASP C C N N 93 ASP O O N N 94 ASP CB C N N 95 ASP CG C N N 96 ASP OD1 O N N 97 ASP OD2 O N N 98 ASP OXT O N N 99 ASP H H N N 100 ASP H2 H N N 101 ASP HA H N N 102 ASP HB2 H N N 103 ASP HB3 H N N 104 ASP HD2 H N N 105 ASP HXT H N N 106 CYS N N N N 107 CYS CA C N R 108 CYS C C N N 109 CYS O O N N 110 CYS CB C N N 111 CYS SG S N N 112 CYS OXT O N N 113 CYS H H N N 114 CYS H2 H N N 115 CYS HA H N N 116 CYS HB2 H N N 117 CYS HB3 H N N 118 CYS HG H N N 119 CYS HXT H N N 120 GLN N N N N 121 GLN CA C N S 122 GLN C C N N 123 GLN O O N N 124 GLN CB C N N 125 GLN CG C N N 126 GLN CD C N N 127 GLN OE1 O N N 128 GLN NE2 N N N 129 GLN OXT O N N 130 GLN H H N N 131 GLN H2 H N N 132 GLN HA H N N 133 GLN HB2 H N N 134 GLN HB3 H N N 135 GLN HG2 H N N 136 GLN HG3 H N N 137 GLN HE21 H N N 138 GLN HE22 H N N 139 GLN HXT H N N 140 GLU N N N N 141 GLU CA C N S 142 GLU C C N N 143 GLU O O N N 144 GLU CB C N N 145 GLU CG C N N 146 GLU CD C N N 147 GLU OE1 O N N 148 GLU OE2 O N N 149 GLU OXT O N N 150 GLU H H N N 151 GLU H2 H N N 152 GLU HA H N N 153 GLU HB2 H N N 154 GLU HB3 H N N 155 GLU HG2 H N N 156 GLU HG3 H N N 157 GLU HE2 H N N 158 GLU HXT H N N 159 GLY N N N N 160 GLY CA C N N 161 GLY C C N N 162 GLY O O N N 163 GLY OXT O N N 164 GLY H H N N 165 GLY H2 H N N 166 GLY HA2 H N N 167 GLY HA3 H N N 168 GLY HXT H N N 169 HIS N N N N 170 HIS CA C N S 171 HIS C C N N 172 HIS O O N N 173 HIS CB C N N 174 HIS CG C Y N 175 HIS ND1 N Y N 176 HIS CD2 C Y N 177 HIS CE1 C Y N 178 HIS NE2 N Y N 179 HIS OXT O N N 180 HIS H H N N 181 HIS H2 H N N 182 HIS HA H N N 183 HIS HB2 H N N 184 HIS HB3 H N N 185 HIS HD1 H N N 186 HIS HD2 H N N 187 HIS HE1 H N N 188 HIS HE2 H N N 189 HIS HXT H N N 190 HOH O O N N 191 HOH H1 H N N 192 HOH H2 H N N 193 ILE N N N N 194 ILE CA C N S 195 ILE C C N N 196 ILE O O N N 197 ILE CB C N S 198 ILE CG1 C N N 199 ILE CG2 C N N 200 ILE CD1 C N N 201 ILE OXT O N N 202 ILE H H N N 203 ILE H2 H N N 204 ILE HA H N N 205 ILE HB H N N 206 ILE HG12 H N N 207 ILE HG13 H N N 208 ILE HG21 H N N 209 ILE HG22 H N N 210 ILE HG23 H N N 211 ILE HD11 H N N 212 ILE HD12 H N N 213 ILE HD13 H N N 214 ILE HXT H N N 215 LEU N N N N 216 LEU CA C N S 217 LEU C C N N 218 LEU O O N N 219 LEU CB C N N 220 LEU CG C N N 221 LEU CD1 C N N 222 LEU CD2 C N N 223 LEU OXT O N N 224 LEU H H N N 225 LEU H2 H N N 226 LEU HA H N N 227 LEU HB2 H N N 228 LEU HB3 H N N 229 LEU HG H N N 230 LEU HD11 H N N 231 LEU HD12 H N N 232 LEU HD13 H N N 233 LEU HD21 H N N 234 LEU HD22 H N N 235 LEU HD23 H N N 236 LEU HXT H N N 237 LYS N N N N 238 LYS CA C N S 239 LYS C C N N 240 LYS O O N N 241 LYS CB C N N 242 LYS CG C N N 243 LYS CD C N N 244 LYS CE C N N 245 LYS NZ N N N 246 LYS OXT O N N 247 LYS H H N N 248 LYS H2 H N N 249 LYS HA H N N 250 LYS HB2 H N N 251 LYS HB3 H N N 252 LYS HG2 H N N 253 LYS HG3 H N N 254 LYS HD2 H N N 255 LYS HD3 H N N 256 LYS HE2 H N N 257 LYS HE3 H N N 258 LYS HZ1 H N N 259 LYS HZ2 H N N 260 LYS HZ3 H N N 261 LYS HXT H N N 262 MET N N N N 263 MET CA C N S 264 MET C C N N 265 MET O O N N 266 MET CB C N N 267 MET CG C N N 268 MET SD S N N 269 MET CE C N N 270 MET OXT O N N 271 MET H H N N 272 MET H2 H N N 273 MET HA H N N 274 MET HB2 H N N 275 MET HB3 H N N 276 MET HG2 H N N 277 MET HG3 H N N 278 MET HE1 H N N 279 MET HE2 H N N 280 MET HE3 H N N 281 MET HXT H N N 282 NAG C1 C N R 283 NAG C2 C N R 284 NAG C3 C N R 285 NAG C4 C N S 286 NAG C5 C N R 287 NAG C6 C N N 288 NAG C7 C N N 289 NAG C8 C N N 290 NAG N2 N N N 291 NAG O1 O N N 292 NAG O3 O N N 293 NAG O4 O N N 294 NAG O5 O N N 295 NAG O6 O N N 296 NAG O7 O N N 297 NAG H1 H N N 298 NAG H2 H N N 299 NAG H3 H N N 300 NAG H4 H N N 301 NAG H5 H N N 302 NAG H61 H N N 303 NAG H62 H N N 304 NAG H81 H N N 305 NAG H82 H N N 306 NAG H83 H N N 307 NAG HN2 H N N 308 NAG HO1 H N N 309 NAG HO3 H N N 310 NAG HO4 H N N 311 NAG HO6 H N N 312 PHE N N N N 313 PHE CA C N S 314 PHE C C N N 315 PHE O O N N 316 PHE CB C N N 317 PHE CG C Y N 318 PHE CD1 C Y N 319 PHE CD2 C Y N 320 PHE CE1 C Y N 321 PHE CE2 C Y N 322 PHE CZ C Y N 323 PHE OXT O N N 324 PHE H H N N 325 PHE H2 H N N 326 PHE HA H N N 327 PHE HB2 H N N 328 PHE HB3 H N N 329 PHE HD1 H N N 330 PHE HD2 H N N 331 PHE HE1 H N N 332 PHE HE2 H N N 333 PHE HZ H N N 334 PHE HXT H N N 335 PRO N N N N 336 PRO CA C N S 337 PRO C C N N 338 PRO O O N N 339 PRO CB C N N 340 PRO CG C N N 341 PRO CD C N N 342 PRO OXT O N N 343 PRO H H N N 344 PRO HA H N N 345 PRO HB2 H N N 346 PRO HB3 H N N 347 PRO HG2 H N N 348 PRO HG3 H N N 349 PRO HD2 H N N 350 PRO HD3 H N N 351 PRO HXT H N N 352 SER N N N N 353 SER CA C N S 354 SER C C N N 355 SER O O N N 356 SER CB C N N 357 SER OG O N N 358 SER OXT O N N 359 SER H H N N 360 SER H2 H N N 361 SER HA H N N 362 SER HB2 H N N 363 SER HB3 H N N 364 SER HG H N N 365 SER HXT H N N 366 THR N N N N 367 THR CA C N S 368 THR C C N N 369 THR O O N N 370 THR CB C N R 371 THR OG1 O N N 372 THR CG2 C N N 373 THR OXT O N N 374 THR H H N N 375 THR H2 H N N 376 THR HA H N N 377 THR HB H N N 378 THR HG1 H N N 379 THR HG21 H N N 380 THR HG22 H N N 381 THR HG23 H N N 382 THR HXT H N N 383 TRP N N N N 384 TRP CA C N S 385 TRP C C N N 386 TRP O O N N 387 TRP CB C N N 388 TRP CG C Y N 389 TRP CD1 C Y N 390 TRP CD2 C Y N 391 TRP NE1 N Y N 392 TRP CE2 C Y N 393 TRP CE3 C Y N 394 TRP CZ2 C Y N 395 TRP CZ3 C Y N 396 TRP CH2 C Y N 397 TRP OXT O N N 398 TRP H H N N 399 TRP H2 H N N 400 TRP HA H N N 401 TRP HB2 H N N 402 TRP HB3 H N N 403 TRP HD1 H N N 404 TRP HE1 H N N 405 TRP HE3 H N N 406 TRP HZ2 H N N 407 TRP HZ3 H N N 408 TRP HH2 H N N 409 TRP HXT H N N 410 TYR N N N N 411 TYR CA C N S 412 TYR C C N N 413 TYR O O N N 414 TYR CB C N N 415 TYR CG C Y N 416 TYR CD1 C Y N 417 TYR CD2 C Y N 418 TYR CE1 C Y N 419 TYR CE2 C Y N 420 TYR CZ C Y N 421 TYR OH O N N 422 TYR OXT O N N 423 TYR H H N N 424 TYR H2 H N N 425 TYR HA H N N 426 TYR HB2 H N N 427 TYR HB3 H N N 428 TYR HD1 H N N 429 TYR HD2 H N N 430 TYR HE1 H N N 431 TYR HE2 H N N 432 TYR HH H N N 433 TYR HXT H N N 434 VAL N N N N 435 VAL CA C N S 436 VAL C C N N 437 VAL O O N N 438 VAL CB C N N 439 VAL CG1 C N N 440 VAL CG2 C N N 441 VAL OXT O N N 442 VAL H H N N 443 VAL H2 H N N 444 VAL HA H N N 445 VAL HB H N N 446 VAL HG11 H N N 447 VAL HG12 H N N 448 VAL HG13 H N N 449 VAL HG21 H N N 450 VAL HG22 H N N 451 VAL HG23 H N N 452 VAL HXT H N N 453 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 8HG O6 C6 doub N N 1 8HG C6 N1 sing N N 2 8HG C6 C5 sing N N 3 8HG N1 C2 sing N N 4 8HG N1 HN1 sing N N 5 8HG C2 N2 sing N N 6 8HG C2 N3 doub N N 7 8HG N2 HN21 sing N N 8 8HG N2 HN22 sing N N 9 8HG N3 C4 sing N N 10 8HG C4 C5 doub N N 11 8HG C4 N9 sing N N 12 8HG C5 N7 sing N N 13 8HG N7 C8 sing N N 14 8HG C8 O20 doub N N 15 8HG C8 N9 sing N N 16 8HG N9 "C1'" sing N N 17 8HG "C1'" "O4'" sing N N 18 8HG "C1'" "C2'" sing N N 19 8HG "C1'" "H1'" sing N N 20 8HG "O4'" "C4'" sing N N 21 8HG "C2'" "C3'" sing N N 22 8HG "C2'" "H2'1" sing N N 23 8HG "C2'" "H2'2" sing N N 24 8HG "C3'" "O3'" sing N N 25 8HG "C3'" "C4'" sing N N 26 8HG "C3'" "H3'" sing N N 27 8HG "O3'" H1 sing N N 28 8HG "C4'" "C5'" sing N N 29 8HG "C4'" "H4'" sing N N 30 8HG "C5'" "O5'" sing N N 31 8HG "C5'" "H5'1" sing N N 32 8HG "C5'" "H5'2" sing N N 33 8HG "O5'" "H5'" sing N N 34 8HG N7 H13 sing N N 35 ALA N CA sing N N 36 ALA N H sing N N 37 ALA N H2 sing N N 38 ALA CA C sing N N 39 ALA CA CB sing N N 40 ALA CA HA sing N N 41 ALA C O doub N N 42 ALA C OXT sing N N 43 ALA CB HB1 sing N N 44 ALA CB HB2 sing N N 45 ALA CB HB3 sing N N 46 ALA OXT HXT sing N N 47 ARG N CA sing N N 48 ARG N H sing N N 49 ARG N H2 sing N N 50 ARG CA C sing N N 51 ARG CA CB sing N N 52 ARG CA HA sing N N 53 ARG C O doub N N 54 ARG C OXT sing N N 55 ARG CB CG sing N N 56 ARG CB HB2 sing N N 57 ARG CB HB3 sing N N 58 ARG CG CD sing N N 59 ARG CG HG2 sing N N 60 ARG CG HG3 sing N N 61 ARG CD NE sing N N 62 ARG CD HD2 sing N N 63 ARG CD HD3 sing N N 64 ARG NE CZ sing N N 65 ARG NE HE sing N N 66 ARG CZ NH1 sing N N 67 ARG CZ NH2 doub N N 68 ARG NH1 HH11 sing N N 69 ARG NH1 HH12 sing N N 70 ARG NH2 HH21 sing N N 71 ARG NH2 HH22 sing N N 72 ARG OXT HXT sing N N 73 ASN N CA sing N N 74 ASN N H sing N N 75 ASN N H2 sing N N 76 ASN CA C sing N N 77 ASN CA CB sing N N 78 ASN CA HA sing N N 79 ASN C O doub N N 80 ASN C OXT sing N N 81 ASN CB CG sing N N 82 ASN CB HB2 sing N N 83 ASN CB HB3 sing N N 84 ASN CG OD1 doub N N 85 ASN CG ND2 sing N N 86 ASN ND2 HD21 sing N N 87 ASN ND2 HD22 sing N N 88 ASN OXT HXT sing N N 89 ASP N CA sing N N 90 ASP N H sing N N 91 ASP N H2 sing N N 92 ASP CA C sing N N 93 ASP CA CB sing N N 94 ASP CA HA sing N N 95 ASP C O doub N N 96 ASP C OXT sing N N 97 ASP CB CG sing N N 98 ASP CB HB2 sing N N 99 ASP CB HB3 sing N N 100 ASP CG OD1 doub N N 101 ASP CG OD2 sing N N 102 ASP OD2 HD2 sing N N 103 ASP OXT HXT sing N N 104 CYS N CA sing N N 105 CYS N H sing N N 106 CYS N H2 sing N N 107 CYS CA C sing N N 108 CYS CA CB sing N N 109 CYS CA HA sing N N 110 CYS C O doub N N 111 CYS C OXT sing N N 112 CYS CB SG sing N N 113 CYS CB HB2 sing N N 114 CYS CB HB3 sing N N 115 CYS SG HG sing N N 116 CYS OXT HXT sing N N 117 GLN N CA sing N N 118 GLN N H sing N N 119 GLN N H2 sing N N 120 GLN CA C sing N N 121 GLN CA CB sing N N 122 GLN CA HA sing N N 123 GLN C O doub N N 124 GLN C OXT sing N N 125 GLN CB CG sing N N 126 GLN CB HB2 sing N N 127 GLN CB HB3 sing N N 128 GLN CG CD sing N N 129 GLN CG HG2 sing N N 130 GLN CG HG3 sing N N 131 GLN CD OE1 doub N N 132 GLN CD NE2 sing N N 133 GLN NE2 HE21 sing N N 134 GLN NE2 HE22 sing N N 135 GLN OXT HXT sing N N 136 GLU N CA sing N N 137 GLU N H sing N N 138 GLU N H2 sing N N 139 GLU CA C sing N N 140 GLU CA CB sing N N 141 GLU CA HA sing N N 142 GLU C O doub N N 143 GLU C OXT sing N N 144 GLU CB CG sing N N 145 GLU CB HB2 sing N N 146 GLU CB HB3 sing N N 147 GLU CG CD sing N N 148 GLU CG HG2 sing N N 149 GLU CG HG3 sing N N 150 GLU CD OE1 doub N N 151 GLU CD OE2 sing N N 152 GLU OE2 HE2 sing N N 153 GLU OXT HXT sing N N 154 GLY N CA sing N N 155 GLY N H sing N N 156 GLY N H2 sing N N 157 GLY CA C sing N N 158 GLY CA HA2 sing N N 159 GLY CA HA3 sing N N 160 GLY C O doub N N 161 GLY C OXT sing N N 162 GLY OXT HXT sing N N 163 HIS N CA sing N N 164 HIS N H sing N N 165 HIS N H2 sing N N 166 HIS CA C sing N N 167 HIS CA CB sing N N 168 HIS CA HA sing N N 169 HIS C O doub N N 170 HIS C OXT sing N N 171 HIS CB CG sing N N 172 HIS CB HB2 sing N N 173 HIS CB HB3 sing N N 174 HIS CG ND1 sing Y N 175 HIS CG CD2 doub Y N 176 HIS ND1 CE1 doub Y N 177 HIS ND1 HD1 sing N N 178 HIS CD2 NE2 sing Y N 179 HIS CD2 HD2 sing N N 180 HIS CE1 NE2 sing Y N 181 HIS CE1 HE1 sing N N 182 HIS NE2 HE2 sing N N 183 HIS OXT HXT sing N N 184 HOH O H1 sing N N 185 HOH O H2 sing N N 186 ILE N CA sing N N 187 ILE N H sing N N 188 ILE N H2 sing N N 189 ILE CA C sing N N 190 ILE CA CB sing N N 191 ILE CA HA sing N N 192 ILE C O doub N N 193 ILE C OXT sing N N 194 ILE CB CG1 sing N N 195 ILE CB CG2 sing N N 196 ILE CB HB sing N N 197 ILE CG1 CD1 sing N N 198 ILE CG1 HG12 sing N N 199 ILE CG1 HG13 sing N N 200 ILE CG2 HG21 sing N N 201 ILE CG2 HG22 sing N N 202 ILE CG2 HG23 sing N N 203 ILE CD1 HD11 sing N N 204 ILE CD1 HD12 sing N N 205 ILE CD1 HD13 sing N N 206 ILE OXT HXT sing N N 207 LEU N CA sing N N 208 LEU N H sing N N 209 LEU N H2 sing N N 210 LEU CA C sing N N 211 LEU CA CB sing N N 212 LEU CA HA sing N N 213 LEU C O doub N N 214 LEU C OXT sing N N 215 LEU CB CG sing N N 216 LEU CB HB2 sing N N 217 LEU CB HB3 sing N N 218 LEU CG CD1 sing N N 219 LEU CG CD2 sing N N 220 LEU CG HG sing N N 221 LEU CD1 HD11 sing N N 222 LEU CD1 HD12 sing N N 223 LEU CD1 HD13 sing N N 224 LEU CD2 HD21 sing N N 225 LEU CD2 HD22 sing N N 226 LEU CD2 HD23 sing N N 227 LEU OXT HXT sing N N 228 LYS N CA sing N N 229 LYS N H sing N N 230 LYS N H2 sing N N 231 LYS CA C sing N N 232 LYS CA CB sing N N 233 LYS CA HA sing N N 234 LYS C O doub N N 235 LYS C OXT sing N N 236 LYS CB CG sing N N 237 LYS CB HB2 sing N N 238 LYS CB HB3 sing N N 239 LYS CG CD sing N N 240 LYS CG HG2 sing N N 241 LYS CG HG3 sing N N 242 LYS CD CE sing N N 243 LYS CD HD2 sing N N 244 LYS CD HD3 sing N N 245 LYS CE NZ sing N N 246 LYS CE HE2 sing N N 247 LYS CE HE3 sing N N 248 LYS NZ HZ1 sing N N 249 LYS NZ HZ2 sing N N 250 LYS NZ HZ3 sing N N 251 LYS OXT HXT sing N N 252 MET N CA sing N N 253 MET N H sing N N 254 MET N H2 sing N N 255 MET CA C sing N N 256 MET CA CB sing N N 257 MET CA HA sing N N 258 MET C O doub N N 259 MET C OXT sing N N 260 MET CB CG sing N N 261 MET CB HB2 sing N N 262 MET CB HB3 sing N N 263 MET CG SD sing N N 264 MET CG HG2 sing N N 265 MET CG HG3 sing N N 266 MET SD CE sing N N 267 MET CE HE1 sing N N 268 MET CE HE2 sing N N 269 MET CE HE3 sing N N 270 MET OXT HXT sing N N 271 NAG C1 C2 sing N N 272 NAG C1 O1 sing N N 273 NAG C1 O5 sing N N 274 NAG C1 H1 sing N N 275 NAG C2 C3 sing N N 276 NAG C2 N2 sing N N 277 NAG C2 H2 sing N N 278 NAG C3 C4 sing N N 279 NAG C3 O3 sing N N 280 NAG C3 H3 sing N N 281 NAG C4 C5 sing N N 282 NAG C4 O4 sing N N 283 NAG C4 H4 sing N N 284 NAG C5 C6 sing N N 285 NAG C5 O5 sing N N 286 NAG C5 H5 sing N N 287 NAG C6 O6 sing N N 288 NAG C6 H61 sing N N 289 NAG C6 H62 sing N N 290 NAG C7 C8 sing N N 291 NAG C7 N2 sing N N 292 NAG C7 O7 doub N N 293 NAG C8 H81 sing N N 294 NAG C8 H82 sing N N 295 NAG C8 H83 sing N N 296 NAG N2 HN2 sing N N 297 NAG O1 HO1 sing N N 298 NAG O3 HO3 sing N N 299 NAG O4 HO4 sing N N 300 NAG O6 HO6 sing N N 301 PHE N CA sing N N 302 PHE N H sing N N 303 PHE N H2 sing N N 304 PHE CA C sing N N 305 PHE CA CB sing N N 306 PHE CA HA sing N N 307 PHE C O doub N N 308 PHE C OXT sing N N 309 PHE CB CG sing N N 310 PHE CB HB2 sing N N 311 PHE CB HB3 sing N N 312 PHE CG CD1 doub Y N 313 PHE CG CD2 sing Y N 314 PHE CD1 CE1 sing Y N 315 PHE CD1 HD1 sing N N 316 PHE CD2 CE2 doub Y N 317 PHE CD2 HD2 sing N N 318 PHE CE1 CZ doub Y N 319 PHE CE1 HE1 sing N N 320 PHE CE2 CZ sing Y N 321 PHE CE2 HE2 sing N N 322 PHE CZ HZ sing N N 323 PHE OXT HXT sing N N 324 PRO N CA sing N N 325 PRO N CD sing N N 326 PRO N H sing N N 327 PRO CA C sing N N 328 PRO CA CB sing N N 329 PRO CA HA sing N N 330 PRO C O doub N N 331 PRO C OXT sing N N 332 PRO CB CG sing N N 333 PRO CB HB2 sing N N 334 PRO CB HB3 sing N N 335 PRO CG CD sing N N 336 PRO CG HG2 sing N N 337 PRO CG HG3 sing N N 338 PRO CD HD2 sing N N 339 PRO CD HD3 sing N N 340 PRO OXT HXT sing N N 341 SER N CA sing N N 342 SER N H sing N N 343 SER N H2 sing N N 344 SER CA C sing N N 345 SER CA CB sing N N 346 SER CA HA sing N N 347 SER C O doub N N 348 SER C OXT sing N N 349 SER CB OG sing N N 350 SER CB HB2 sing N N 351 SER CB HB3 sing N N 352 SER OG HG sing N N 353 SER OXT HXT sing N N 354 THR N CA sing N N 355 THR N H sing N N 356 THR N H2 sing N N 357 THR CA C sing N N 358 THR CA CB sing N N 359 THR CA HA sing N N 360 THR C O doub N N 361 THR C OXT sing N N 362 THR CB OG1 sing N N 363 THR CB CG2 sing N N 364 THR CB HB sing N N 365 THR OG1 HG1 sing N N 366 THR CG2 HG21 sing N N 367 THR CG2 HG22 sing N N 368 THR CG2 HG23 sing N N 369 THR OXT HXT sing N N 370 TRP N CA sing N N 371 TRP N H sing N N 372 TRP N H2 sing N N 373 TRP CA C sing N N 374 TRP CA CB sing N N 375 TRP CA HA sing N N 376 TRP C O doub N N 377 TRP C OXT sing N N 378 TRP CB CG sing N N 379 TRP CB HB2 sing N N 380 TRP CB HB3 sing N N 381 TRP CG CD1 doub Y N 382 TRP CG CD2 sing Y N 383 TRP CD1 NE1 sing Y N 384 TRP CD1 HD1 sing N N 385 TRP CD2 CE2 doub Y N 386 TRP CD2 CE3 sing Y N 387 TRP NE1 CE2 sing Y N 388 TRP NE1 HE1 sing N N 389 TRP CE2 CZ2 sing Y N 390 TRP CE3 CZ3 doub Y N 391 TRP CE3 HE3 sing N N 392 TRP CZ2 CH2 doub Y N 393 TRP CZ2 HZ2 sing N N 394 TRP CZ3 CH2 sing Y N 395 TRP CZ3 HZ3 sing N N 396 TRP CH2 HH2 sing N N 397 TRP OXT HXT sing N N 398 TYR N CA sing N N 399 TYR N H sing N N 400 TYR N H2 sing N N 401 TYR CA C sing N N 402 TYR CA CB sing N N 403 TYR CA HA sing N N 404 TYR C O doub N N 405 TYR C OXT sing N N 406 TYR CB CG sing N N 407 TYR CB HB2 sing N N 408 TYR CB HB3 sing N N 409 TYR CG CD1 doub Y N 410 TYR CG CD2 sing Y N 411 TYR CD1 CE1 sing Y N 412 TYR CD1 HD1 sing N N 413 TYR CD2 CE2 doub Y N 414 TYR CD2 HD2 sing N N 415 TYR CE1 CZ doub Y N 416 TYR CE1 HE1 sing N N 417 TYR CE2 CZ sing Y N 418 TYR CE2 HE2 sing N N 419 TYR CZ OH sing N N 420 TYR OH HH sing N N 421 TYR OXT HXT sing N N 422 VAL N CA sing N N 423 VAL N H sing N N 424 VAL N H2 sing N N 425 VAL CA C sing N N 426 VAL CA CB sing N N 427 VAL CA HA sing N N 428 VAL C O doub N N 429 VAL C OXT sing N N 430 VAL CB CG1 sing N N 431 VAL CB CG2 sing N N 432 VAL CB HB sing N N 433 VAL CG1 HG11 sing N N 434 VAL CG1 HG12 sing N N 435 VAL CG1 HG13 sing N N 436 VAL CG2 HG21 sing N N 437 VAL CG2 HG22 sing N N 438 VAL CG2 HG23 sing N N 439 VAL OXT HXT sing N N 440 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1IJ8 _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 2A5B _atom_sites.fract_transf_matrix[1][1] 0.014282 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012581 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.023305 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_