HEADER OXIDOREDUCTASE 01-JUL-05 2A5W TITLE CRYSTAL STRUCTURE OF THE OXIDIZED GAMMA-SUBUNIT OF THE DISSIMILATORY TITLE 2 SULFITE REDUCTASE (DSRC) FROM ARCHAEOGLOBUS FULGIDUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: SULFITE REDUCTASE, DESULFOVIRIDIN-TYPE SUBUNIT GAMMA COMPND 3 (DSVC); COMPND 4 CHAIN: A, B, C; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARCHAEOGLOBUS FULGIDUS; SOURCE 3 ORGANISM_TAXID: 224325; SOURCE 4 STRAIN: DSM 4304; SOURCE 5 GENE: DSRC; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PCR2.1-TOPO KEYWDS ORTHOGONAL HELIX BUNDLE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR G.J.MANDER,M.S.WEISS,R.HEDDERICH,J.KAHNT,U.ERMLER,E.WARKENTIN REVDAT 4 23-AUG-23 2A5W 1 REMARK REVDAT 3 13-JUL-11 2A5W 1 VERSN REVDAT 2 24-FEB-09 2A5W 1 VERSN REVDAT 1 06-SEP-05 2A5W 0 JRNL AUTH G.J.MANDER,M.S.WEISS,R.HEDDERICH,J.KAHNT,U.ERMLER, JRNL AUTH 2 E.WARKENTIN JRNL TITL X-RAY STRUCTURE OF THE GAMMA-SUBUNIT OF A DISSIMILATORY JRNL TITL 2 SULFITE REDUCTASE: FIXED AND FLEXIBLE C-TERMINAL ARMS. JRNL REF FEBS LETT. V. 579 4600 2005 JRNL REFN ISSN 0014-5793 JRNL PMID 16098517 JRNL DOI 10.1016/J.FEBSLET.2005.07.029 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.99 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 3 NUMBER OF REFLECTIONS : 23085 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.231 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1165 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.15 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1303 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 76.52 REMARK 3 BIN R VALUE (WORKING SET) : 0.2020 REMARK 3 BIN FREE R VALUE SET COUNT : 72 REMARK 3 BIN FREE R VALUE : 0.3070 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2823 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 186 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.74000 REMARK 3 B22 (A**2) : 1.53000 REMARK 3 B33 (A**2) : -0.78000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.229 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.180 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.124 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.877 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.933 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2925 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3962 ; 1.313 ; 1.991 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 339 ; 5.520 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 138 ;32.267 ;23.913 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 530 ;16.110 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 21 ;15.966 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 407 ; 0.092 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2211 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1369 ; 0.197 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1933 ; 0.309 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 196 ; 0.151 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 42 ; 0.193 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 16 ; 0.208 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1803 ; 0.735 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2799 ; 1.114 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1328 ; 1.787 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1163 ; 2.833 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 115 REMARK 3 ORIGIN FOR THE GROUP (A): 66.0905 -10.4947 42.7372 REMARK 3 T TENSOR REMARK 3 T11: -0.0784 T22: -0.0328 REMARK 3 T33: -0.0124 T12: 0.0128 REMARK 3 T13: -0.0307 T23: -0.0342 REMARK 3 L TENSOR REMARK 3 L11: 1.2934 L22: 1.6355 REMARK 3 L33: 2.1459 L12: 0.6371 REMARK 3 L13: 0.3406 L23: 0.6434 REMARK 3 S TENSOR REMARK 3 S11: 0.0505 S12: 0.1158 S13: -0.0990 REMARK 3 S21: 0.0662 S22: 0.0664 S23: -0.2248 REMARK 3 S31: 0.1217 S32: 0.0012 S33: -0.1169 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2 B 115 REMARK 3 ORIGIN FOR THE GROUP (A): 47.8437 8.9251 47.4560 REMARK 3 T TENSOR REMARK 3 T11: -0.0786 T22: -0.0245 REMARK 3 T33: -0.0470 T12: 0.0081 REMARK 3 T13: 0.0235 T23: 0.0147 REMARK 3 L TENSOR REMARK 3 L11: 1.8923 L22: 1.9536 REMARK 3 L33: 1.2362 L12: 0.4032 REMARK 3 L13: 0.1107 L23: -0.2130 REMARK 3 S TENSOR REMARK 3 S11: 0.1082 S12: 0.1286 S13: -0.0293 REMARK 3 S21: 0.0163 S22: 0.0006 S23: -0.0204 REMARK 3 S31: -0.0491 S32: -0.0584 S33: -0.1088 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 2 C 115 REMARK 3 ORIGIN FOR THE GROUP (A): 39.0940 32.9831 57.0129 REMARK 3 T TENSOR REMARK 3 T11: 0.0631 T22: -0.0907 REMARK 3 T33: -0.1108 T12: 0.0704 REMARK 3 T13: 0.0443 T23: 0.0424 REMARK 3 L TENSOR REMARK 3 L11: 3.2847 L22: 2.5798 REMARK 3 L33: 2.8979 L12: -1.1041 REMARK 3 L13: -0.6698 L23: -0.3322 REMARK 3 S TENSOR REMARK 3 S11: 0.2891 S12: 0.1048 S13: 0.2604 REMARK 3 S21: -0.5498 S22: -0.1366 S23: -0.0726 REMARK 3 S31: 0.0944 S32: -0.2363 S33: -0.1525 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE AUTHORS STATE THAT THE SSBOND REMARK 3 BETWEEN CYS 77 AND CYS 85 IS PARTIALLY SPLIT, I.E., IN ONLY REMARK 3 ABOUT 50% OF ALL THE INSTANCES THERE IS A BOND AND NONE FOR THE REMARK 3 REMAINDER. REMARK 4 REMARK 4 2A5W COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-JUL-05. REMARK 100 THE DEPOSITION ID IS D_1000033526. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-DEC-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9393 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24295 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 200 DATA REDUNDANCY : 5.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06600 REMARK 200 FOR THE DATA SET : 17.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 82.4 REMARK 200 DATA REDUNDANCY IN SHELL : 4.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.38000 REMARK 200 FOR SHELL : 3.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: EPMR REMARK 200 STARTING MODEL: PDB ENTRY 1SAU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 5000, MES/KOH, (NH4)2 SO4, PH 6.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.61000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 64.85600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.40000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 64.85600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.61000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 32.40000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1680 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12190 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -41.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 MET B 1 REMARK 465 MET C 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS A 85 CA - CB - SG ANGL. DEV. = 7.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 81 -65.55 -104.26 REMARK 500 VAL B 81 -66.87 -108.02 REMARK 500 ASP B 101 -60.76 -107.18 REMARK 500 VAL C 81 -64.09 -99.15 REMARK 500 ASP C 101 -63.21 -108.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 116 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 117 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 116 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 117 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1SAU RELATED DB: PDB REMARK 900 HIGH RESOLUTION STRUCTURE (1.12 A) OF THE NATIVE PROTEIN DBREF 2A5W A 1 115 UNP O28055 O28055_ARCFU 1 115 DBREF 2A5W B 1 115 UNP O28055 O28055_ARCFU 1 115 DBREF 2A5W C 1 115 UNP O28055 O28055_ARCFU 1 115 SEQRES 1 A 115 MET PRO GLU LEU GLU VAL LYS GLY LYS LYS LEU ARG LEU SEQRES 2 A 115 ASP GLU ASP GLY PHE LEU GLN ASP TRP GLU GLU TRP ASP SEQRES 3 A 115 GLU GLU VAL ALA GLU ALA LEU ALA LYS ASP THR ARG PHE SEQRES 4 A 115 SER PRO GLN PRO ILE GLU LEU THR GLU GLU HIS TRP LYS SEQRES 5 A 115 ILE ILE ARG TYR LEU ARG ASP TYR PHE ILE LYS TYR GLY SEQRES 6 A 115 VAL ALA PRO PRO VAL ARG MET LEU VAL LYS HIS CYS LYS SEQRES 7 A 115 LYS GLU VAL ARG PRO ASP CYS ASN LEU GLN TYR ILE TYR SEQRES 8 A 115 LYS LEU PHE PRO GLN GLY PRO ALA LYS ASP ALA CYS ARG SEQRES 9 A 115 ILE ALA GLY LEU PRO LYS PRO THR GLY CYS VAL SEQRES 1 B 115 MET PRO GLU LEU GLU VAL LYS GLY LYS LYS LEU ARG LEU SEQRES 2 B 115 ASP GLU ASP GLY PHE LEU GLN ASP TRP GLU GLU TRP ASP SEQRES 3 B 115 GLU GLU VAL ALA GLU ALA LEU ALA LYS ASP THR ARG PHE SEQRES 4 B 115 SER PRO GLN PRO ILE GLU LEU THR GLU GLU HIS TRP LYS SEQRES 5 B 115 ILE ILE ARG TYR LEU ARG ASP TYR PHE ILE LYS TYR GLY SEQRES 6 B 115 VAL ALA PRO PRO VAL ARG MET LEU VAL LYS HIS CYS LYS SEQRES 7 B 115 LYS GLU VAL ARG PRO ASP CYS ASN LEU GLN TYR ILE TYR SEQRES 8 B 115 LYS LEU PHE PRO GLN GLY PRO ALA LYS ASP ALA CYS ARG SEQRES 9 B 115 ILE ALA GLY LEU PRO LYS PRO THR GLY CYS VAL SEQRES 1 C 115 MET PRO GLU LEU GLU VAL LYS GLY LYS LYS LEU ARG LEU SEQRES 2 C 115 ASP GLU ASP GLY PHE LEU GLN ASP TRP GLU GLU TRP ASP SEQRES 3 C 115 GLU GLU VAL ALA GLU ALA LEU ALA LYS ASP THR ARG PHE SEQRES 4 C 115 SER PRO GLN PRO ILE GLU LEU THR GLU GLU HIS TRP LYS SEQRES 5 C 115 ILE ILE ARG TYR LEU ARG ASP TYR PHE ILE LYS TYR GLY SEQRES 6 C 115 VAL ALA PRO PRO VAL ARG MET LEU VAL LYS HIS CYS LYS SEQRES 7 C 115 LYS GLU VAL ARG PRO ASP CYS ASN LEU GLN TYR ILE TYR SEQRES 8 C 115 LYS LEU PHE PRO GLN GLY PRO ALA LYS ASP ALA CYS ARG SEQRES 9 C 115 ILE ALA GLY LEU PRO LYS PRO THR GLY CYS VAL HET SO4 A 116 5 HET SO4 A 117 5 HET SO4 B 116 5 HET SO4 B 117 5 HETNAM SO4 SULFATE ION FORMUL 4 SO4 4(O4 S 2-) FORMUL 8 HOH *186(H2 O) HELIX 1 1 ASP A 21 TRP A 25 5 5 HELIX 2 2 ASP A 26 LYS A 35 1 10 HELIX 3 3 THR A 47 GLY A 65 1 19 HELIX 4 4 PRO A 69 VAL A 81 1 13 HELIX 5 5 ASN A 86 PHE A 94 1 9 HELIX 6 6 GLN A 96 ASP A 101 1 6 HELIX 7 7 ASP A 101 ALA A 106 1 6 HELIX 8 8 ASP B 21 TRP B 25 5 5 HELIX 9 9 ASP B 26 LYS B 35 1 10 HELIX 10 10 THR B 47 GLY B 65 1 19 HELIX 11 11 PRO B 69 VAL B 81 1 13 HELIX 12 12 ASN B 86 PHE B 94 1 9 HELIX 13 13 GLN B 96 ASP B 101 1 6 HELIX 14 14 ASP B 101 ALA B 106 1 6 HELIX 15 15 ASP C 21 TRP C 25 5 5 HELIX 16 16 ASP C 26 LYS C 35 1 10 HELIX 17 17 THR C 47 GLY C 65 1 19 HELIX 18 18 PRO C 69 VAL C 81 1 13 HELIX 19 19 ASN C 86 PHE C 94 1 9 HELIX 20 20 ASP C 101 ALA C 106 1 6 SHEET 1 A 2 GLU A 3 VAL A 6 0 SHEET 2 A 2 LYS A 9 ARG A 12 -1 O LEU A 11 N LEU A 4 SHEET 1 B 2 GLU B 3 VAL B 6 0 SHEET 2 B 2 LYS B 9 ARG B 12 -1 O LYS B 9 N VAL B 6 SHEET 1 C 2 GLU C 3 VAL C 6 0 SHEET 2 C 2 LYS C 9 ARG C 12 -1 O LEU C 11 N LEU C 4 SSBOND 1 CYS A 77 CYS A 85 1555 1555 2.00 SSBOND 2 CYS B 77 CYS B 85 1555 1555 2.05 SSBOND 3 CYS B 114 CYS C 114 1555 1555 2.04 SSBOND 4 CYS C 77 CYS C 85 1555 1555 2.05 SITE 1 AC1 4 ARG B 71 LYS B 75 PRO C 2 ARG C 38 SITE 1 AC2 5 ARG B 71 LYS B 78 ASN B 86 HOH B 228 SITE 2 AC2 5 HOH B 366 SITE 1 AC3 5 ARG A 71 LYS A 75 LYS B 63 VAL C 66 SITE 2 AC3 5 HOH C 392 SITE 1 AC4 3 LYS A 78 ASN A 86 HOH A 395 CRYST1 49.220 64.800 129.712 90.00 90.00 90.00 P 21 21 21 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020316 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015432 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007709 0.00000