HEADER TRANSCRIPTION 02-JUL-05 2A6B TITLE CRYSTAL STRUCTURE OF A PUTATIVE TRANSCRIPTIONAL REGULATOR OF THE TENA TITLE 2 FAMILY (SPR0628) FROM STREPTOCOCCUS PNEUMONIAE R6 AT 1.70 A TITLE 3 RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN SPR0628; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS PNEUMONIAE R6; SOURCE 3 ORGANISM_TAXID: 171101; SOURCE 4 STRAIN: ATCC BAA-255 / R6; SOURCE 5 GENE: NP_358222.1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: HK100 KEYWDS STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, KEYWDS 2 PROTEIN STRUCTURE INITIATIVE, PSI-2, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 5 25-JAN-23 2A6B 1 SEQADV LINK REVDAT 4 13-JUL-11 2A6B 1 VERSN REVDAT 3 23-MAR-11 2A6B 1 HEADER TITLE KEYWDS REVDAT 2 24-FEB-09 2A6B 1 VERSN REVDAT 1 16-AUG-05 2A6B 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF (NP_358222.1) FROM STREPTOCOCCUS JRNL TITL 2 PNEUMONIAE R6 AT 1.70 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.98 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 36426 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.155 REMARK 3 FREE R VALUE : 0.175 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1937 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2665 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.1870 REMARK 3 BIN FREE R VALUE SET COUNT : 137 REMARK 3 BIN FREE R VALUE : 0.2430 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1758 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 240 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.29 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.19000 REMARK 3 B22 (A**2) : -1.19000 REMARK 3 B33 (A**2) : 2.38000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.072 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.071 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.046 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.776 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.970 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.963 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1826 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1620 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2481 ; 1.304 ; 1.937 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3753 ; 1.272 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 224 ; 4.933 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 93 ;35.219 ;24.624 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 298 ;12.866 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;16.404 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 268 ; 0.085 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2061 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 400 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 417 ; 0.225 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1576 ; 0.165 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 923 ; 0.192 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1031 ; 0.084 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 157 ; 0.151 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 3 ; 0.096 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 30 ; 0.136 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 16 ; 0.162 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1164 ; 2.192 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 450 ; 0.467 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1748 ; 2.797 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 826 ; 4.702 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 730 ; 6.349 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 221 REMARK 3 ORIGIN FOR THE GROUP (A): 21.1713 44.5958 23.1674 REMARK 3 T TENSOR REMARK 3 T11: -0.0501 T22: -0.0394 REMARK 3 T33: -0.0208 T12: 0.0092 REMARK 3 T13: -0.0148 T23: 0.0185 REMARK 3 L TENSOR REMARK 3 L11: 0.6991 L22: 1.0757 REMARK 3 L33: 0.5274 L12: 0.0316 REMARK 3 L13: -0.0879 L23: 0.1637 REMARK 3 S TENSOR REMARK 3 S11: 0.0041 S12: -0.0318 S13: 0.0222 REMARK 3 S21: 0.0007 S22: 0.0172 S23: 0.0501 REMARK 3 S31: -0.0116 S32: -0.0118 S33: -0.0213 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. REMARK 3 2. THERE MAY BE A MINOR DUAL CONFORMATION FROM RESIDUE 104 TO REMARK 3 RESIDUE 116. THE SIDE CHAIN OF TYR110 CAN BE MODEL IN TWO REMARK 3 ORIENTATION. IN THIS MODEL ONLY ONE MODEL IS BUILT AND FIT REMARK 3 IN THE DENSITY. REMARK 4 REMARK 4 2A6B COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-JUL-05. REMARK 100 THE DEPOSITION ID IS D_1000033541. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JUN-05; 05-MAY-05 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : SSRL; SSRL REMARK 200 BEAMLINE : BL9-2; BL1-5 REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000; 0.918381, 0.978455, REMARK 200 0.978964, 1.033150 REMARK 200 MONOCHROMATOR : NULL; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD; ADSC REMARK 200 QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA, CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38398 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 29.980 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 9.400 REMARK 200 R MERGE (I) : 0.08900 REMARK 200 R SYM (I) : 0.08900 REMARK 200 FOR THE DATA SET : 4.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 9.60 REMARK 200 R MERGE FOR SHELL (I) : 0.51300 REMARK 200 R SYM FOR SHELL (I) : 0.51300 REMARK 200 FOR SHELL : 1.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.65 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: O.2M LICL, 20.0% PEG-3350, NO BUFFER REMARK 280 PH 6.7, VAPOR DIFFUSION,SITTING DROP,NANODROP, TEMPERATURE 273K. REMARK 280 0.2M NH4OAC, 30.0% PEG-4000, 0.1M CITRATE PH 5.6, VAPOR REMARK 280 DIFFUSION,SITTING DROP,NANODROP, TEMPERATURE 273K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 4 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z REMARK 290 4555 Y+1/2,-X+1/2,Z REMARK 290 5555 -X+1/2,Y+1/2,-Z REMARK 290 6555 X+1/2,-Y+1/2,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 59.95400 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 59.95400 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 59.95400 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 59.95400 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 59.95400 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 59.95400 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 59.95400 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 59.95400 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1790 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18010 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 47.10500 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -11 REMARK 465 GLY A -10 REMARK 465 SER A -9 REMARK 465 ASP A -8 REMARK 465 LYS A -7 REMARK 465 ILE A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 MSE A 1 REMARK 465 GLU A 2 REMARK 465 VAL A 222 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 45 CD CE NZ REMARK 470 LYS A 74 CE NZ REMARK 470 LYS A 101 CD CE NZ REMARK 470 GLU A 107 CD OE1 OE2 REMARK 470 GLU A 161 CG CD OE1 OE2 REMARK 470 GLU A 179 CD OE1 OE2 REMARK 470 LYS A 193 CE NZ REMARK 470 GLU A 196 CB CG CD OE1 OE2 REMARK 470 GLU A 200 CD OE1 OE2 REMARK 470 ASP A 221 CB CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 MSE A 126 SE MSE A 126 CE -0.503 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 197 41.85 -101.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 358745 RELATED DB: TARGETDB DBREF 2A6B A 1 222 UNP Q8DQK6 Q8DQK6_STRR6 1 222 SEQADV 2A6B GLY A -10 UNP Q8DQK6 EXPRESSION TAG SEQADV 2A6B SER A -9 UNP Q8DQK6 EXPRESSION TAG SEQADV 2A6B ASP A -8 UNP Q8DQK6 EXPRESSION TAG SEQADV 2A6B LYS A -7 UNP Q8DQK6 EXPRESSION TAG SEQADV 2A6B ILE A -6 UNP Q8DQK6 EXPRESSION TAG SEQADV 2A6B HIS A -5 UNP Q8DQK6 EXPRESSION TAG SEQADV 2A6B HIS A -4 UNP Q8DQK6 EXPRESSION TAG SEQADV 2A6B HIS A -3 UNP Q8DQK6 EXPRESSION TAG SEQADV 2A6B HIS A -2 UNP Q8DQK6 EXPRESSION TAG SEQADV 2A6B HIS A -1 UNP Q8DQK6 EXPRESSION TAG SEQADV 2A6B HIS A 0 UNP Q8DQK6 EXPRESSION TAG SEQRES 1 A 234 MSE GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS MSE SEQRES 2 A 234 GLU THR GLN ASP TYR ALA PHE GLN PRO GLY LEU THR VAL SEQRES 3 A 234 GLY GLU LEU LEU LYS SER SER GLN LYS ASP TRP GLN ALA SEQRES 4 A 234 ALA ILE ASN HIS ARG PHE VAL LYS GLU LEU PHE ALA GLY SEQRES 5 A 234 THR ILE GLU ASN LYS VAL LEU LYS ASP TYR LEU ILE GLN SEQRES 6 A 234 ASP TYR HIS PHE PHE ASP ALA PHE LEU SER MSE LEU GLY SEQRES 7 A 234 ALA CYS VAL ALA HIS ALA ASP LYS LEU GLU SER LYS LEU SEQRES 8 A 234 ARG PHE ALA LYS GLN LEU GLY PHE LEU GLU ALA ASP GLU SEQRES 9 A 234 ASP GLY TYR PHE GLN LYS ALA PHE LYS GLU LEU LYS VAL SEQRES 10 A 234 ALA GLU ASN ASP TYR LEU GLU VAL THR LEU HIS PRO VAL SEQRES 11 A 234 THR LYS ALA PHE GLN ASP LEU MSE TYR SER ALA VAL ALA SEQRES 12 A 234 SER SER ASP TYR ALA HIS LEU LEU VAL MSE LEU VAL ILE SEQRES 13 A 234 ALA GLU GLY LEU TYR LEU ASP TRP GLY SER LYS ASP LEU SEQRES 14 A 234 ALA LEU PRO GLU VAL TYR ILE HIS SER GLU TRP ILE ASN SEQRES 15 A 234 LEU HIS ARG GLY PRO PHE PHE ALA GLU TRP VAL GLN PHE SEQRES 16 A 234 LEU VAL ASP GLU LEU ASN ARG VAL GLY LYS ASN ARG GLU SEQRES 17 A 234 ASP LEU THR GLU LEU GLN GLN ARG TRP ASN GLN ALA VAL SEQRES 18 A 234 ALA LEU GLU LEU ALA PHE PHE ASP ILE GLY TYR ASP VAL MODRES 2A6B MSE A 64 MET SELENOMETHIONINE MODRES 2A6B MSE A 126 MET SELENOMETHIONINE MODRES 2A6B MSE A 141 MET SELENOMETHIONINE HET MSE A 64 8 HET MSE A 126 8 HET MSE A 141 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 3(C5 H11 N O2 SE) FORMUL 2 HOH *240(H2 O) HELIX 1 1 PRO A 10 SER A 20 1 11 HELIX 2 2 SER A 21 ASN A 30 1 10 HELIX 3 3 HIS A 31 ALA A 39 1 9 HELIX 4 4 GLU A 43 ALA A 72 1 30 HELIX 5 5 LYS A 74 LEU A 103 1 30 HELIX 6 6 ALA A 106 GLU A 112 1 7 HELIX 7 7 HIS A 116 SER A 133 1 18 HELIX 8 8 ASP A 134 SER A 154 1 21 HELIX 9 9 VAL A 162 LEU A 171 1 10 HELIX 10 10 GLY A 174 LYS A 193 1 20 HELIX 11 11 ASP A 197 ILE A 218 1 22 HELIX 12 12 GLY A 219 ASP A 221 5 3 LINK C SER A 63 N MSE A 64 1555 1555 1.33 LINK C MSE A 64 N LEU A 65 1555 1555 1.33 LINK C LEU A 125 N MSE A 126 1555 1555 1.31 LINK C MSE A 126 N TYR A 127 1555 1555 1.33 LINK C VAL A 140 N MSE A 141 1555 1555 1.33 LINK C MSE A 141 N LEU A 142 1555 1555 1.33 CRYST1 119.908 119.908 47.105 90.00 90.00 90.00 P 4 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008340 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008340 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021230 0.00000