HEADER OXIDOREDUCTASE 11-JUL-05 2A99 TITLE CRYSTAL STRUCTURE OF RECOMBINANT CHICKEN SULFITE OXIDASE AT RESTING TITLE 2 STATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: SULFITE OXIDASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: CATALYTIC CORE DOMAIN AND C TERMINAL DIMERIZATION DOMAIN; COMPND 5 EC: 1.8.3.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GALLUS GALLUS; SOURCE 3 ORGANISM_COMMON: CHICKEN; SOURCE 4 ORGANISM_TAXID: 9031; SOURCE 5 ORGAN: LIVER; SOURCE 6 ORGANELLE: MITOCHONDRION; SOURCE 7 CELLULAR_LOCATION: MITOCHONDRIAL INTERMEMBRANE SPACE; SOURCE 8 GENE: SUOX; SOURCE 9 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 11 EXPRESSION_SYSTEM_STRAIN: TP1000; SOURCE 12 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 13 EXPRESSION_SYSTEM_PLASMID: PTRC99A; SOURCE 14 OTHER_DETAILS: THE GENE IS CHEMICALLY SYNTHESIZED BASED ON THE SOURCE 15 PROTEIN SEQUENCE OF SULFITE OXIDASE FROM GALLUS GALLUS KEYWDS SULFITE OXIDASE; MOLYBDOPTERIN; MOLYBDENUM, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR E.KARAKAS,H.L.WILSON,T.N.GRAF,S.XIANG,S.JARAMILLO-BUSQUETS, AUTHOR 2 K.V.RAJAGOPALAN,C.KISKER REVDAT 6 23-AUG-23 2A99 1 REMARK LINK REVDAT 5 11-OCT-17 2A99 1 REMARK REVDAT 4 13-JUL-11 2A99 1 VERSN REVDAT 3 24-FEB-09 2A99 1 VERSN REVDAT 2 25-OCT-05 2A99 1 JRNL REVDAT 1 02-AUG-05 2A99 0 JRNL AUTH E.KARAKAS,H.L.WILSON,T.N.GRAF,S.XIANG,S.JARAMILLO-BUSQUETS, JRNL AUTH 2 K.V.RAJAGOPALAN,C.KISKER JRNL TITL STRUCTURAL INSIGHTS INTO SULFITE OXIDASE DEFICIENCY JRNL REF J.BIOL.CHEM. V. 280 33506 2005 JRNL REFN ISSN 0021-9258 JRNL PMID 16048997 JRNL DOI 10.1074/JBC.M505035200 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 27994 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.150 REMARK 3 R VALUE (WORKING SET) : 0.149 REMARK 3 FREE R VALUE : 0.182 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1424 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1956 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.85 REMARK 3 BIN R VALUE (WORKING SET) : 0.2020 REMARK 3 BIN FREE R VALUE SET COUNT : 108 REMARK 3 BIN FREE R VALUE : 0.2520 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2871 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 32 REMARK 3 SOLVENT ATOMS : 236 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 45.25 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.19000 REMARK 3 B22 (A**2) : 2.19000 REMARK 3 B33 (A**2) : -4.39000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.158 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.140 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.102 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.199 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.976 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.968 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2993 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2707 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4099 ; 1.593 ; 1.969 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6278 ; 1.245 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 371 ; 4.104 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 131 ;29.605 ;22.290 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 432 ;13.932 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 31 ;17.907 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 439 ; 0.092 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3365 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 621 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 547 ; 0.208 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2689 ; 0.233 ; 0.300 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1410 ; 0.185 ; 0.500 REMARK 3 NON-BONDED TORSION OTHERS (A): 1640 ; 0.099 ; 0.500 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 337 ; 0.209 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 1 ; 0.102 ; 0.500 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 5 ; 0.200 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): 34 ; 0.289 ; 0.300 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 18 ; 0.256 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2327 ; 1.056 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 744 ; 0.167 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3007 ; 1.256 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1347 ; 1.959 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1092 ; 2.953 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 95 A 466 REMARK 3 ORIGIN FOR THE GROUP (A): 42.2396 16.3585 1.1673 REMARK 3 T TENSOR REMARK 3 T11: -0.1279 T22: -0.0420 REMARK 3 T33: -0.1191 T12: -0.0691 REMARK 3 T13: -0.0166 T23: 0.0203 REMARK 3 L TENSOR REMARK 3 L11: 0.7543 L22: 1.4090 REMARK 3 L33: 1.6840 L12: -0.2599 REMARK 3 L13: -0.2950 L23: 0.0795 REMARK 3 S TENSOR REMARK 3 S11: 0.0096 S12: 0.0187 S13: 0.0191 REMARK 3 S21: -0.0751 S22: -0.0351 S23: -0.1238 REMARK 3 S31: -0.2843 S32: 0.1349 S33: 0.0255 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2A99 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-JUL-05. REMARK 100 THE DEPOSITION ID IS D_1000033645. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-JUN-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X26C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.100 REMARK 200 MONOCHROMATOR : SI 111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27999 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.08300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.90 REMARK 200 R MERGE FOR SHELL (I) : 0.59900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1SOX REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.62 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, MAGNESIUM CHLORIDE, MES, PH REMARK 280 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 3555 -Y,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X,Z+3/4 REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X,-Y,Z REMARK 290 7555 -Y+1/2,X,Z+3/4 REMARK 290 8555 Y,-X+1/2,Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 43.00200 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 43.00200 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 77.09000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 43.00200 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 38.54500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 43.00200 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 115.63500 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 43.00200 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 43.00200 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 77.09000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 43.00200 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 115.63500 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 43.00200 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 38.54500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE SECOND PART OF THE BIOLOGICAL ASSEMBLY IS GENERATED BY REMARK 300 THE TWO FOLD AXIS REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 86.00400 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2531 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2585 O HOH A 2607 2.14 REMARK 500 O HOH A 2561 O HOH A 2658 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 205 -136.06 -94.19 REMARK 500 PHE A 285 133.13 -38.47 REMARK 500 GLN A 343 -93.01 -119.15 REMARK 500 GLN A 465 176.01 -58.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MO A1501 MO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 185 SG REMARK 620 2 MTE A 501 S1' 146.4 REMARK 620 3 MTE A 501 S2' 94.8 81.7 REMARK 620 4 HOH A2501 O 104.3 108.8 106.2 REMARK 620 5 HOH A2502 O 84.5 76.9 138.7 114.0 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MTE A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MO A 1501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1001 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2A9A RELATED DB: PDB REMARK 900 WILD TYPE ENZYME WITH THE BOUND PRODUCT REMARK 900 RELATED ID: 2A9B RELATED DB: PDB REMARK 900 R138Q MUTANT AT RESTING STATE REMARK 900 RELATED ID: 2A9C RELATED DB: PDB REMARK 900 R138Q MUTANT WITH THE BOUND PRODUCT REMARK 900 RELATED ID: 2A9D RELATED DB: PDB REMARK 900 SAME PROTEIN WITH AN ARG AT RESIDUE 161 DBREF 2A99 A 95 466 UNP P07850 SUOX_CHICK 95 466 SEQRES 1 A 372 ASP PRO PHE ALA GLY ASP PRO PRO ARG HIS PRO GLY LEU SEQRES 2 A 372 ARG VAL ASN SER GLN LYS PRO PHE ASN ALA GLU PRO PRO SEQRES 3 A 372 ALA GLU LEU LEU ALA GLU ARG PHE LEU THR PRO ASN GLU SEQRES 4 A 372 LEU PHE PHE THR ARG ASN HIS LEU PRO VAL PRO ALA VAL SEQRES 5 A 372 GLU PRO SER SER TYR ARG LEU ARG VAL ASP GLY PRO GLY SEQRES 6 A 372 GLY GLY THR LEU SER LEU SER LEU ALA GLU LEU ARG SER SEQRES 7 A 372 ARG PHE PRO LYS HIS GLU VAL THR ALA THR LEU GLN CYS SEQRES 8 A 372 ALA GLY ASN ARG ARG SER GLU MET SER ARG VAL ARG PRO SEQRES 9 A 372 VAL LYS GLY LEU PRO TRP ASP ILE GLY ALA ILE SER THR SEQRES 10 A 372 ALA ARG TRP GLY GLY ALA ARG LEU ARG ASP VAL LEU LEU SEQRES 11 A 372 HIS ALA GLY PHE PRO GLU GLU LEU GLN GLY GLU TRP HIS SEQRES 12 A 372 VAL CYS PHE GLU GLY LEU ASP ALA ASP PRO GLY GLY ALA SEQRES 13 A 372 PRO TYR GLY ALA SER ILE PRO TYR GLY ARG ALA LEU SER SEQRES 14 A 372 PRO ALA ALA ASP VAL LEU LEU ALA TYR GLU MET ASN GLY SEQRES 15 A 372 THR GLU LEU PRO ARG ASP HIS GLY PHE PRO VAL ARG VAL SEQRES 16 A 372 VAL VAL PRO GLY VAL VAL GLY ALA ARG SER VAL LYS TRP SEQRES 17 A 372 LEU ARG ARG VAL ALA VAL SER PRO ASP GLU SER PRO SER SEQRES 18 A 372 HIS TRP GLN GLN ASN ASP TYR LYS GLY PHE SER PRO CYS SEQRES 19 A 372 VAL ASP TRP ASP THR VAL ASP TYR ARG THR ALA PRO ALA SEQRES 20 A 372 ILE GLN GLU LEU PRO VAL GLN SER ALA VAL THR GLN PRO SEQRES 21 A 372 ARG PRO GLY ALA ALA VAL PRO PRO GLY GLU LEU THR VAL SEQRES 22 A 372 LYS GLY TYR ALA TRP SER GLY GLY GLY ARG GLU VAL VAL SEQRES 23 A 372 ARG VAL ASP VAL SER LEU ASP GLY GLY ARG THR TRP LYS SEQRES 24 A 372 VAL ALA ARG LEU MET GLY ASP LYS ALA PRO PRO GLY ARG SEQRES 25 A 372 ALA TRP ALA TRP ALA LEU TRP GLU LEU THR VAL PRO VAL SEQRES 26 A 372 GLU ALA GLY THR GLU LEU GLU ILE VAL CYS LYS ALA VAL SEQRES 27 A 372 ASP SER SER TYR ASN VAL GLN PRO ASP SER VAL ALA PRO SEQRES 28 A 372 ILE TRP ASN LEU ARG GLY VAL LEU SER THR ALA TRP HIS SEQRES 29 A 372 ARG VAL ARG VAL SER VAL GLN ASP HET CL A 502 1 HET MTE A 501 24 HET MO A1501 1 HET GOL A1001 6 HETNAM CL CHLORIDE ION HETNAM MTE PHOSPHONIC ACIDMONO-(2-AMINO-5,6-DIMERCAPTO-4-OXO-3,7, HETNAM 2 MTE 8A,9,10,10A-HEXAHYDRO-4H-8-OXA-1,3,9,10-TETRAAZA- HETNAM 3 MTE ANTHRACEN-7-YLMETHYL)ESTER HETNAM MO MOLYBDENUM ATOM HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 CL CL 1- FORMUL 3 MTE C10 H14 N5 O6 P S2 FORMUL 4 MO MO FORMUL 5 GOL C3 H8 O3 FORMUL 6 HOH *236(H2 O) HELIX 1 1 PRO A 120 ALA A 125 1 6 HELIX 2 2 LEU A 167 PHE A 174 1 8 HELIX 3 3 ARG A 189 ARG A 197 1 9 HELIX 4 4 LEU A 219 ALA A 226 1 8 HELIX 5 5 TYR A 258 SER A 263 1 6 HELIX 6 6 PRO A 280 GLY A 284 5 5 HELIX 7 7 VAL A 295 SER A 299 5 5 HELIX 8 8 SER A 315 ASN A 320 1 6 HELIX 9 9 ASP A 335 ALA A 339 5 5 HELIX 10 10 VAL A 443 TRP A 447 5 5 SHEET 1 A 3 ARG A 108 SER A 111 0 SHEET 2 A 3 ASN A 116 GLU A 118 -1 O GLU A 118 N ARG A 108 SHEET 3 A 3 THR A 137 ARG A 138 -1 O THR A 137 N ALA A 117 SHEET 1 B 5 THR A 162 SER A 166 0 SHEET 2 B 5 ARG A 152 ASP A 156 -1 N LEU A 153 O LEU A 165 SHEET 3 B 5 LEU A 303 SER A 309 1 O ARG A 304 N ARG A 154 SHEET 4 B 5 HIS A 237 ALA A 245 -1 N CYS A 239 O ALA A 307 SHEET 5 B 5 PRO A 251 PRO A 257 -1 O TYR A 252 N GLY A 242 SHEET 1 C 4 HIS A 177 GLN A 184 0 SHEET 2 C 4 ILE A 209 ARG A 218 -1 O TRP A 214 N VAL A 179 SHEET 3 C 4 LEU A 269 MET A 274 -1 O LEU A 270 N ALA A 217 SHEET 4 C 4 THR A 277 GLU A 278 -1 O THR A 277 N MET A 274 SHEET 1 D 4 HIS A 177 GLN A 184 0 SHEET 2 D 4 ILE A 209 ARG A 218 -1 O TRP A 214 N VAL A 179 SHEET 3 D 4 LEU A 269 MET A 274 -1 O LEU A 270 N ALA A 217 SHEET 4 D 4 ARG A 288 VAL A 290 -1 O VAL A 290 N LEU A 269 SHEET 1 E 4 GLN A 348 GLN A 353 0 SHEET 2 E 4 GLY A 363 TRP A 372 -1 O LYS A 368 N GLN A 353 SHEET 3 E 4 ALA A 411 VAL A 419 -1 O VAL A 417 N LEU A 365 SHEET 4 E 4 ARG A 396 MET A 398 -1 N MET A 398 O LEU A 412 SHEET 1 F 5 ALA A 359 VAL A 360 0 SHEET 2 F 5 HIS A 458 VAL A 464 1 O SER A 463 N VAL A 360 SHEET 3 F 5 GLU A 424 ASP A 433 -1 N ILE A 427 O VAL A 460 SHEET 4 F 5 VAL A 379 SER A 385 -1 N ASP A 383 O LYS A 430 SHEET 5 F 5 LYS A 393 VAL A 394 -1 O LYS A 393 N VAL A 384 LINK SG CYS A 185 MO MO A1501 1555 1555 2.50 LINK S1' MTE A 501 MO MO A1501 1555 1555 2.34 LINK S2' MTE A 501 MO MO A1501 1555 1555 2.40 LINK MO MO A1501 O HOH A2501 1555 1555 1.73 LINK MO MO A1501 O HOH A2502 1555 1555 2.39 CISPEP 1 LYS A 113 PRO A 114 0 -0.02 CISPEP 2 PHE A 285 PRO A 286 0 2.64 CISPEP 3 GLN A 353 PRO A 354 0 1.31 SITE 1 AC1 4 ARG A 190 TRP A 204 HOH A2537 HOH A2559 SITE 1 AC2 19 PHE A 135 PHE A 136 THR A 137 ARG A 138 SITE 2 AC2 19 HIS A 140 CYS A 185 ASP A 244 TYR A 252 SITE 3 AC2 19 HIS A 283 ARG A 288 GLY A 296 ALA A 297 SITE 4 AC2 19 SER A 299 VAL A 300 LYS A 301 TRP A 302 SITE 5 AC2 19 TYR A 322 MO A1501 HOH A2502 SITE 1 AC3 4 CYS A 185 MTE A 501 HOH A2501 HOH A2502 SITE 1 AC4 4 PRO A 101 PRO A 102 ARG A 103 GLN A 112 CRYST1 86.004 86.004 154.180 90.00 90.00 90.00 I 41 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011627 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011627 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006486 0.00000