HEADER VIRAL PROTEIN 18-JUL-05 2ACF TITLE NMR STRUCTURE OF SARS-COV NON-STRUCTURAL PROTEIN NSP3A (SARS1) FROM TITLE 2 SARS CORONAVIRUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: REPLICASE POLYPROTEIN 1AB; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: ADRP DOMAIN OF NSP-3; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SARS CORONAVIRUS TOR2; SOURCE 3 ORGANISM_TAXID: 227984; SOURCE 4 STRAIN: TOR-2; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ADRP DOMAIN, SARS NSP-3, APPR-1-P PHOSPHATASE, STRUCTURAL GENOMICS, KEYWDS 2 JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE KEYWDS 3 INITIATIVE, PSI-2, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR K.S.SAIKATENDU,J.S.JOSEPH,V.SUBRAMANIAN,B.W.NEUMAN,M.J.BUCHMEIER, AUTHOR 2 R.C.STEVENS,P.KUHN,JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 7 14-FEB-24 2ACF 1 REMARK SEQADV REVDAT 6 11-OCT-17 2ACF 1 REMARK REVDAT 5 13-JUL-11 2ACF 1 VERSN REVDAT 4 28-JUL-10 2ACF 1 HEADER TITLE KEYWDS REVDAT 3 24-FEB-09 2ACF 1 VERSN REVDAT 2 24-OCT-06 2ACF 1 KEYWDS AUTHOR REMARK MASTER REVDAT 1 14-FEB-06 2ACF 0 JRNL AUTH K.S.SAIKATENDU,J.S.JOSEPH,V.SUBRAMANIAN,T.CLAYTON, JRNL AUTH 2 M.GRIFFITH,K.MOY,J.VELASQUEZ,B.W.NEUMAN,M.J.BUCHMEIER, JRNL AUTH 3 R.C.STEVENS,P.KUHN JRNL TITL STRUCTURAL BASIS OF SEVERE ACUTE RESPIRATORY SYNDROME JRNL TITL 2 CORONAVIRUS ADP-RIBOSE-1''-PHOSPHATE DEPHOSPHORYLATION BY A JRNL TITL 3 CONSERVED DOMAIN OF NSP3. JRNL REF STRUCTURE V. 13 1665 2005 JRNL REFN ISSN 0969-2126 JRNL PMID 16271890 JRNL DOI 10.1016/J.STR.2005.07.022 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 145609 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.165 REMARK 3 R VALUE (WORKING SET) : 0.164 REMARK 3 FREE R VALUE : 0.189 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 7683 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.44 REMARK 3 REFLECTION IN BIN (WORKING SET) : 10556 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.94 REMARK 3 BIN R VALUE (WORKING SET) : 0.2250 REMARK 3 BIN FREE R VALUE SET COUNT : 602 REMARK 3 BIN FREE R VALUE : 0.2480 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5259 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 72 REMARK 3 SOLVENT ATOMS : 950 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.53 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.53 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.60000 REMARK 3 B22 (A**2) : 0.74000 REMARK 3 B33 (A**2) : -0.14000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.055 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.057 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.034 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.847 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.970 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.959 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5649 ; 0.018 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 5208 ; 0.005 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7689 ; 1.696 ; 1.976 REMARK 3 BOND ANGLES OTHERS (DEGREES): 12125 ; 0.872 ; 3.002 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 751 ; 6.487 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 226 ;42.576 ;26.903 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 978 ;11.623 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;18.018 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 914 ; 0.106 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6385 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 949 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1236 ; 0.223 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 5358 ; 0.166 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2917 ; 0.178 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 3233 ; 0.088 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 598 ; 0.149 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): 1 ; 0.059 ; 0.200 REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 54 ; 0.234 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 190 ; 0.240 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 92 ; 0.159 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4647 ; 1.526 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1494 ; 0.290 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5877 ; 1.767 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2249 ; 3.184 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1812 ; 4.195 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2ACF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-AUG-05. REMARK 100 THE DEPOSITION ID IS D_1000033740. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-MAR-05 REMARK 200 TEMPERATURE (KELVIN) : 200 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97945 REMARK 200 MONOCHROMATOR : SAGITALLY FOCUSED REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : BLU-ICE REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 154558 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.06200 REMARK 200 R SYM (I) : 0.04300 REMARK 200 FOR THE DATA SET : 32.9300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.43 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : 0.59000 REMARK 200 R SYM FOR SHELL (I) : 0.59000 REMARK 200 FOR SHELL : 2.820 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.5M SODIUM MALONATE, PH 7.0, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 38.24750 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 62.73250 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.79250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 62.73250 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 38.24750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.79250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 177 REMARK 465 HIS A 178 REMARK 465 HIS A 179 REMARK 465 ASP A 352 REMARK 465 ASN A 353 REMARK 465 LEU A 354 REMARK 465 LYS A 355 REMARK 465 PRO A 356 REMARK 465 ARG A 357 REMARK 465 VAL A 358 REMARK 465 HIS B 177 REMARK 465 HIS B 178 REMARK 465 HIS B 179 REMARK 465 HIS B 180 REMARK 465 HIS B 181 REMARK 465 HIS B 182 REMARK 465 PRO B 356 REMARK 465 ARG B 357 REMARK 465 VAL B 358 REMARK 465 HIS C 177 REMARK 465 HIS C 178 REMARK 465 HIS C 179 REMARK 465 HIS C 180 REMARK 465 HIS C 181 REMARK 465 HIS C 182 REMARK 465 HIS D 177 REMARK 465 HIS D 178 REMARK 465 HIS D 179 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP B 249 CB - CG - OD2 ANGL. DEV. = -6.4 DEGREES REMARK 500 TYR B 295 CB - CG - CD2 ANGL. DEV. = 3.7 DEGREES REMARK 500 ASP C 249 CB - CG - OD2 ANGL. DEV. = -6.6 DEGREES REMARK 500 ARG C 330 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 268 -132.05 51.88 REMARK 500 THR A 331 -131.07 -98.47 REMARK 500 HIS B 268 -131.03 54.69 REMARK 500 HIS C 268 -131.66 53.88 REMARK 500 THR C 331 -138.50 -73.96 REMARK 500 HIS D 181 -39.80 -132.38 REMARK 500 HIS D 268 -127.96 52.89 REMARK 500 THR D 331 -131.38 -97.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL D 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL C 1005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL C 1006 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 1007 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL C 1008 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL C 1009 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1010 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL C 1011 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL C 1012 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 367631 RELATED DB: TARGETDB DBREF 2ACF A 184 358 GB 34555776 NP_828862 184 358 DBREF 2ACF B 184 358 GB 34555776 NP_828862 184 358 DBREF 2ACF C 184 358 GB 34555776 NP_828862 184 358 DBREF 2ACF D 184 358 GB 34555776 NP_828862 184 358 SEQADV 2ACF HIS A 177 GB 34555776 EXPRESSION TAG SEQADV 2ACF HIS A 178 GB 34555776 EXPRESSION TAG SEQADV 2ACF HIS A 179 GB 34555776 EXPRESSION TAG SEQADV 2ACF HIS A 180 GB 34555776 EXPRESSION TAG SEQADV 2ACF HIS A 181 GB 34555776 EXPRESSION TAG SEQADV 2ACF HIS A 182 GB 34555776 EXPRESSION TAG SEQADV 2ACF MET A 183 GB 34555776 CLONING ARTIFACT SEQADV 2ACF HIS B 177 GB 34555776 EXPRESSION TAG SEQADV 2ACF HIS B 178 GB 34555776 EXPRESSION TAG SEQADV 2ACF HIS B 179 GB 34555776 EXPRESSION TAG SEQADV 2ACF HIS B 180 GB 34555776 EXPRESSION TAG SEQADV 2ACF HIS B 181 GB 34555776 EXPRESSION TAG SEQADV 2ACF HIS B 182 GB 34555776 EXPRESSION TAG SEQADV 2ACF MET B 183 GB 34555776 CLONING ARTIFACT SEQADV 2ACF HIS C 177 GB 34555776 EXPRESSION TAG SEQADV 2ACF HIS C 178 GB 34555776 EXPRESSION TAG SEQADV 2ACF HIS C 179 GB 34555776 EXPRESSION TAG SEQADV 2ACF HIS C 180 GB 34555776 EXPRESSION TAG SEQADV 2ACF HIS C 181 GB 34555776 EXPRESSION TAG SEQADV 2ACF HIS C 182 GB 34555776 EXPRESSION TAG SEQADV 2ACF MET C 183 GB 34555776 CLONING ARTIFACT SEQADV 2ACF HIS D 177 GB 34555776 EXPRESSION TAG SEQADV 2ACF HIS D 178 GB 34555776 EXPRESSION TAG SEQADV 2ACF HIS D 179 GB 34555776 EXPRESSION TAG SEQADV 2ACF HIS D 180 GB 34555776 EXPRESSION TAG SEQADV 2ACF HIS D 181 GB 34555776 EXPRESSION TAG SEQADV 2ACF HIS D 182 GB 34555776 EXPRESSION TAG SEQADV 2ACF MET D 183 GB 34555776 CLONING ARTIFACT SEQRES 1 A 182 HIS HIS HIS HIS HIS HIS MET PRO VAL ASN GLN PHE THR SEQRES 2 A 182 GLY TYR LEU LYS LEU THR ASP ASN VAL ALA ILE LYS CYS SEQRES 3 A 182 VAL ASP ILE VAL LYS GLU ALA GLN SER ALA ASN PRO MET SEQRES 4 A 182 VAL ILE VAL ASN ALA ALA ASN ILE HIS LEU LYS HIS GLY SEQRES 5 A 182 GLY GLY VAL ALA GLY ALA LEU ASN LYS ALA THR ASN GLY SEQRES 6 A 182 ALA MET GLN LYS GLU SER ASP ASP TYR ILE LYS LEU ASN SEQRES 7 A 182 GLY PRO LEU THR VAL GLY GLY SER CYS LEU LEU SER GLY SEQRES 8 A 182 HIS ASN LEU ALA LYS LYS CYS LEU HIS VAL VAL GLY PRO SEQRES 9 A 182 ASN LEU ASN ALA GLY GLU ASP ILE GLN LEU LEU LYS ALA SEQRES 10 A 182 ALA TYR GLU ASN PHE ASN SER GLN ASP ILE LEU LEU ALA SEQRES 11 A 182 PRO LEU LEU SER ALA GLY ILE PHE GLY ALA LYS PRO LEU SEQRES 12 A 182 GLN SER LEU GLN VAL CYS VAL GLN THR VAL ARG THR GLN SEQRES 13 A 182 VAL TYR ILE ALA VAL ASN ASP LYS ALA LEU TYR GLU GLN SEQRES 14 A 182 VAL VAL MET ASP TYR LEU ASP ASN LEU LYS PRO ARG VAL SEQRES 1 B 182 HIS HIS HIS HIS HIS HIS MET PRO VAL ASN GLN PHE THR SEQRES 2 B 182 GLY TYR LEU LYS LEU THR ASP ASN VAL ALA ILE LYS CYS SEQRES 3 B 182 VAL ASP ILE VAL LYS GLU ALA GLN SER ALA ASN PRO MET SEQRES 4 B 182 VAL ILE VAL ASN ALA ALA ASN ILE HIS LEU LYS HIS GLY SEQRES 5 B 182 GLY GLY VAL ALA GLY ALA LEU ASN LYS ALA THR ASN GLY SEQRES 6 B 182 ALA MET GLN LYS GLU SER ASP ASP TYR ILE LYS LEU ASN SEQRES 7 B 182 GLY PRO LEU THR VAL GLY GLY SER CYS LEU LEU SER GLY SEQRES 8 B 182 HIS ASN LEU ALA LYS LYS CYS LEU HIS VAL VAL GLY PRO SEQRES 9 B 182 ASN LEU ASN ALA GLY GLU ASP ILE GLN LEU LEU LYS ALA SEQRES 10 B 182 ALA TYR GLU ASN PHE ASN SER GLN ASP ILE LEU LEU ALA SEQRES 11 B 182 PRO LEU LEU SER ALA GLY ILE PHE GLY ALA LYS PRO LEU SEQRES 12 B 182 GLN SER LEU GLN VAL CYS VAL GLN THR VAL ARG THR GLN SEQRES 13 B 182 VAL TYR ILE ALA VAL ASN ASP LYS ALA LEU TYR GLU GLN SEQRES 14 B 182 VAL VAL MET ASP TYR LEU ASP ASN LEU LYS PRO ARG VAL SEQRES 1 C 182 HIS HIS HIS HIS HIS HIS MET PRO VAL ASN GLN PHE THR SEQRES 2 C 182 GLY TYR LEU LYS LEU THR ASP ASN VAL ALA ILE LYS CYS SEQRES 3 C 182 VAL ASP ILE VAL LYS GLU ALA GLN SER ALA ASN PRO MET SEQRES 4 C 182 VAL ILE VAL ASN ALA ALA ASN ILE HIS LEU LYS HIS GLY SEQRES 5 C 182 GLY GLY VAL ALA GLY ALA LEU ASN LYS ALA THR ASN GLY SEQRES 6 C 182 ALA MET GLN LYS GLU SER ASP ASP TYR ILE LYS LEU ASN SEQRES 7 C 182 GLY PRO LEU THR VAL GLY GLY SER CYS LEU LEU SER GLY SEQRES 8 C 182 HIS ASN LEU ALA LYS LYS CYS LEU HIS VAL VAL GLY PRO SEQRES 9 C 182 ASN LEU ASN ALA GLY GLU ASP ILE GLN LEU LEU LYS ALA SEQRES 10 C 182 ALA TYR GLU ASN PHE ASN SER GLN ASP ILE LEU LEU ALA SEQRES 11 C 182 PRO LEU LEU SER ALA GLY ILE PHE GLY ALA LYS PRO LEU SEQRES 12 C 182 GLN SER LEU GLN VAL CYS VAL GLN THR VAL ARG THR GLN SEQRES 13 C 182 VAL TYR ILE ALA VAL ASN ASP LYS ALA LEU TYR GLU GLN SEQRES 14 C 182 VAL VAL MET ASP TYR LEU ASP ASN LEU LYS PRO ARG VAL SEQRES 1 D 182 HIS HIS HIS HIS HIS HIS MET PRO VAL ASN GLN PHE THR SEQRES 2 D 182 GLY TYR LEU LYS LEU THR ASP ASN VAL ALA ILE LYS CYS SEQRES 3 D 182 VAL ASP ILE VAL LYS GLU ALA GLN SER ALA ASN PRO MET SEQRES 4 D 182 VAL ILE VAL ASN ALA ALA ASN ILE HIS LEU LYS HIS GLY SEQRES 5 D 182 GLY GLY VAL ALA GLY ALA LEU ASN LYS ALA THR ASN GLY SEQRES 6 D 182 ALA MET GLN LYS GLU SER ASP ASP TYR ILE LYS LEU ASN SEQRES 7 D 182 GLY PRO LEU THR VAL GLY GLY SER CYS LEU LEU SER GLY SEQRES 8 D 182 HIS ASN LEU ALA LYS LYS CYS LEU HIS VAL VAL GLY PRO SEQRES 9 D 182 ASN LEU ASN ALA GLY GLU ASP ILE GLN LEU LEU LYS ALA SEQRES 10 D 182 ALA TYR GLU ASN PHE ASN SER GLN ASP ILE LEU LEU ALA SEQRES 11 D 182 PRO LEU LEU SER ALA GLY ILE PHE GLY ALA LYS PRO LEU SEQRES 12 D 182 GLN SER LEU GLN VAL CYS VAL GLN THR VAL ARG THR GLN SEQRES 13 D 182 VAL TYR ILE ALA VAL ASN ASP LYS ALA LEU TYR GLU GLN SEQRES 14 D 182 VAL VAL MET ASP TYR LEU ASP ASN LEU LYS PRO ARG VAL HET GOL A1002 6 HET GOL A1010 6 HET GOL B1001 6 HET GOL B1004 6 HET GOL B1007 6 HET GOL C1005 6 HET GOL C1006 6 HET GOL C1008 6 HET GOL C1009 6 HET GOL C1011 6 HET GOL C1012 6 HET GOL D1003 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 GOL 12(C3 H8 O3) FORMUL 17 HOH *950(H2 O) HELIX 1 1 ASP A 204 ASN A 213 1 10 HELIX 2 2 GLY A 229 THR A 239 1 11 HELIX 3 3 GLY A 241 GLY A 255 1 15 HELIX 4 4 ASN A 281 GLY A 285 5 5 HELIX 5 5 GLN A 289 ASN A 297 1 9 HELIX 6 6 PHE A 298 GLN A 301 5 4 HELIX 7 7 ALA A 311 GLY A 315 5 5 HELIX 8 8 LYS A 317 VAL A 329 1 13 HELIX 9 9 ASP A 339 LEU A 351 1 13 HELIX 10 10 ASP B 204 ASN B 213 1 10 HELIX 11 11 GLY B 229 THR B 239 1 11 HELIX 12 12 GLY B 241 GLY B 255 1 15 HELIX 13 13 ASN B 281 GLY B 285 5 5 HELIX 14 14 GLN B 289 ASN B 297 1 9 HELIX 15 15 PHE B 298 GLN B 301 5 4 HELIX 16 16 ALA B 311 GLY B 315 5 5 HELIX 17 17 LYS B 317 VAL B 329 1 13 HELIX 18 18 ASP B 339 LEU B 354 1 16 HELIX 19 19 ASP C 204 ASN C 213 1 10 HELIX 20 20 GLY C 229 THR C 239 1 11 HELIX 21 21 GLY C 241 GLY C 255 1 15 HELIX 22 22 ASP C 287 GLN C 289 5 3 HELIX 23 23 LEU C 290 ASN C 297 1 8 HELIX 24 24 PHE C 298 GLN C 301 5 4 HELIX 25 25 ALA C 311 GLY C 315 5 5 HELIX 26 26 LYS C 317 VAL C 329 1 13 HELIX 27 27 ASP C 339 LYS C 355 1 17 HELIX 28 28 ASP D 204 ASN D 213 1 10 HELIX 29 29 GLY D 229 THR D 239 1 11 HELIX 30 30 GLY D 241 GLY D 255 1 15 HELIX 31 31 ASN D 281 GLY D 285 5 5 HELIX 32 32 GLN D 289 ASN D 297 1 9 HELIX 33 33 PHE D 298 GLN D 301 5 4 HELIX 34 34 ALA D 311 GLY D 315 5 5 HELIX 35 35 LYS D 317 VAL D 329 1 13 HELIX 36 36 ASP D 339 LEU D 354 1 16 SHEET 1 A 4 LEU A 192 LYS A 193 0 SHEET 2 A 4 VAL A 198 CYS A 202 -1 O ILE A 200 N LEU A 192 SHEET 3 A 4 GLN A 332 VAL A 337 1 O ILE A 335 N ALA A 199 SHEET 4 A 4 ILE A 303 ALA A 306 1 N LEU A 304 O TYR A 334 SHEET 1 B 3 VAL A 216 ALA A 220 0 SHEET 2 B 3 LYS A 273 VAL A 277 1 O VAL A 277 N ASN A 219 SHEET 3 B 3 SER A 262 SER A 266 -1 N LEU A 265 O CYS A 274 SHEET 1 C 4 LEU B 192 LYS B 193 0 SHEET 2 C 4 VAL B 198 CYS B 202 -1 O ILE B 200 N LEU B 192 SHEET 3 C 4 GLN B 332 VAL B 337 1 O ILE B 335 N ALA B 199 SHEET 4 C 4 ILE B 303 ALA B 306 1 N ALA B 306 O TYR B 334 SHEET 1 D 3 VAL B 216 ALA B 220 0 SHEET 2 D 3 LYS B 273 VAL B 277 1 O VAL B 277 N ASN B 219 SHEET 3 D 3 SER B 262 SER B 266 -1 N LEU B 265 O CYS B 274 SHEET 1 E 4 LEU C 192 LYS C 193 0 SHEET 2 E 4 VAL C 198 CYS C 202 -1 O ILE C 200 N LEU C 192 SHEET 3 E 4 GLN C 332 VAL C 337 1 O ILE C 335 N ALA C 199 SHEET 4 E 4 ILE C 303 ALA C 306 1 N LEU C 304 O TYR C 334 SHEET 1 F 3 VAL C 216 ALA C 220 0 SHEET 2 F 3 LYS C 273 VAL C 277 1 O VAL C 277 N ASN C 219 SHEET 3 F 3 SER C 262 SER C 266 -1 N LEU C 265 O CYS C 274 SHEET 1 G 4 LEU D 192 LYS D 193 0 SHEET 2 G 4 VAL D 198 CYS D 202 -1 O ILE D 200 N LEU D 192 SHEET 3 G 4 GLN D 332 VAL D 337 1 O ILE D 335 N ALA D 199 SHEET 4 G 4 ILE D 303 ALA D 306 1 N LEU D 304 O TYR D 334 SHEET 1 H 3 VAL D 216 ALA D 220 0 SHEET 2 H 3 LYS D 273 VAL D 277 1 O VAL D 277 N ASN D 219 SHEET 3 H 3 SER D 262 SER D 266 -1 N LEU D 265 O CYS D 274 SITE 1 AC1 9 LYS B 237 ASN B 240 GLY B 241 HOH B1057 SITE 2 AC1 9 HOH B1158 LYS C 193 LEU C 194 THR C 195 SITE 3 AC1 9 ASP C 196 SITE 1 AC2 10 LYS A 226 GLN A 244 ASP A 248 HOH A1192 SITE 2 AC2 10 LYS D 226 GLN D 244 ASP D 248 HOH D1013 SITE 3 AC2 10 HOH D1036 HOH D1086 SITE 1 AC3 8 GLY D 229 GLY D 230 GLY D 233 ALA D 234 SITE 2 AC3 8 ARG D 357 VAL D 358 HOH D1172 HOH D1175 SITE 1 AC4 13 ALA B 220 ALA B 221 ASN B 222 LYS B 226 SITE 2 AC4 13 GLY B 228 GLY B 229 ALA B 232 PHE B 314 SITE 3 AC4 13 HOH B1010 HOH B1142 HOH B1267 ASN D 283 SITE 4 AC4 13 HOH D1184 SITE 1 AC5 7 VAL C 231 ALA C 311 GLY C 312 ILE C 313 SITE 2 AC5 7 HOH C1029 HOH C1092 HOH C1181 SITE 1 AC6 10 ILE C 288 GLN C 289 LYS C 292 VAL C 324 SITE 2 AC6 10 HOH C1030 HOH C1039 HOH C1195 HIS D 224 SITE 3 AC6 10 PRO D 256 HOH D1008 SITE 1 AC7 8 LYS B 193 LEU B 194 ASP B 196 LYS C 237 SITE 2 AC7 8 ASN C 240 GLY C 241 HOH C1174 HOH C1191 SITE 1 AC8 6 HIS A 224 HOH A1164 GLU C 286 HOH C1031 SITE 2 AC8 6 HOH C1033 HOH C1199 SITE 1 AC9 12 ASN A 283 HOH A1117 HOH A1184 ALA C 220 SITE 2 AC9 12 ALA C 221 ASN C 222 LYS C 226 GLY C 228 SITE 3 AC9 12 GLY C 229 ALA C 232 PHE C 314 HOH C1017 SITE 1 BC1 6 VAL A 337 ASN A 338 ASP A 339 LEU A 342 SITE 2 BC1 6 HOH A1029 HOH A1091 SITE 1 BC2 9 GLY A 228 GLY A 229 HOH A1043 LEU C 282 SITE 2 BC2 9 ASN C 283 HOH C1055 HOH C1219 LYS D 252 SITE 3 BC2 9 HOH D1051 SITE 1 BC3 3 HOH B1174 GLU C 296 ASN C 299 CRYST1 76.495 81.585 125.465 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013073 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012257 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007970 0.00000