HEADER TRANSFERASE(PHOSPHO)PHOSPHORYL ACCEPTOR 14-MAR-77 2ADK OBSLTE 16-JAN-88 2ADK 3ADK TITLE TWO CONFORMATIONS OF CRYSTALLINE ADENYLATE KINASE COMPND MOL_ID: 1; COMPND 2 MOLECULE:; COMPND 3 CHAIN: NULL; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1 KEYWDS TRANSFERASE(PHOSPHO)PHOSPHORYL ACCEPTOR EXPDTA X-RAY DIFFRACTION AUTHOR G.E.SCHULZ ANDCO-WORKERS REVDAT 11 16-JAN-88 2ADK 3 OBSLTE REVDAT 10 30-SEP-83 2ADK 1 REVDAT REVDAT 9 01-MAR-82 2ADK 1 REMARK REVDAT 8 15-JAN-82 2ADK 1 REMARK REVDAT 7 31-DEC-80 2ADK 1 REMARK REVDAT 6 07-APR-80 2ADK 3 ATOM REVDAT 5 05-MAR-80 2ADK 1 SOURCE REVDAT 4 08-JUN-79 2ADK 3 HELIX ATOM REVDAT 3 01-NOV-77 2ADK 1 COMPND AUTHOR REMARK REVDAT 2 23-AUG-77 2ADK 3 ATOM REVDAT 1 03-MAY-77 2ADK 0 SPRSDE 03-MAY-77 2ADK 1ADK JRNL AUTH W.SACHSENHEIMER,G.E.SCHULZ JRNL TITL TWO CONFORMATIONS OF CRYSTALLINE ADENYLATE KINASE JRNL REF J.MOL.BIOL. V. 114 23 1977 JRNL REFN ASTM JMOBAK UK ISSN 0022-2836 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH E.F.PAI,W.SACHSENHEIMER,R.H.SCHIRMER,G.E.SCHULZ REMARK 1 TITL SUBSTRATE POSITIONS AND INDUCED-FIT IN CRYSTALLINE REMARK 1 TITL 2 ADENYLATE KINASE REMARK 1 REF J.MOL.BIOL. V. 114 37 1977 REMARK 1 REFN ASTM JMOBAK UK ISSN 0022-2836 REMARK 1 REFERENCE 2 REMARK 1 AUTH G.E.SCHULZ,R.H.SCHIRMER REMARK 1 TITL STRUCTURAL STUDIES ON CRYSTALLINE ADENYLATE KINASES REMARK 1 EDIT M.SUNDARALINGAM, S.T.RAO REMARK 1 REF STRUCTURE AND CONFORMATION 303 1975 REMARK 1 REF 2 OF NUCLEIC ACIDS AND REMARK 1 REF 3 PROTEIN-NUCLEIC ACID REMARK 1 REF 4 INTERACTIONS REMARK 1 PUBL UNIVERSITY PARK PRESS,BALTIMORE,MD REMARK 1 REFN ISSN 0-8391-0764-1 REMARK 1 REFERENCE 3 REMARK 1 AUTH G.E.SCHULZ,M.ELZINGA,F.MARX,R.H.SCHIRMER REMARK 1 TITL THREE-DIMENSIONAL STRUCTURE OF ADENYL KINASE REMARK 1 REF NATURE V. 250 120 1974 REMARK 1 REFN ASTM NATUAS UK ISSN 0028-0836 REMARK 1 REFERENCE 4 REMARK 1 AUTH G.E.SCHULZ,R.H.SCHIRMER REMARK 1 TITL TOPOLOGICAL COMPARISON OF ADENYL KINASE WITH OTHER REMARK 1 TITL 2 PROTEINS REMARK 1 REF NATURE V. 250 142 1974 REMARK 1 REFN ASTM NATUAS UK ISSN 0028-0836 REMARK 1 REFERENCE 5 REMARK 1 AUTH G.E.SCHULZ,C.D.BARRY,J.FRIEDMAN,P.Y.CHOU, REMARK 1 AUTH 2 G.D.FASMAN,A.V.FINKELSTEIN,V.I.LIM,O.B.PTITSYN, REMARK 1 AUTH 3 E.A.KABAT,T.T.WU,M.LEVITT,B.ROBSON,K.NAGANO REMARK 1 TITL COMPARISON OF PREDICTED AND EXPERIMENTALLY REMARK 1 TITL 2 DETERMINED SECONDARY STRUCTURE OF ADENYL KINASE REMARK 1 REF NATURE V. 250 140 1974 REMARK 1 REFN ASTM NATUAS UK ISSN 0028-0836 REMARK 1 REFERENCE 6 REMARK 1 AUTH A.HEIL,G.MUELLER,L.NODA,T.PINDER,H.SCHIRMER, REMARK 1 AUTH 2 I.SCHIRMER,I.VONZABERN REMARK 1 TITL THE AMINO-ACID SEQUENCE OF PORCINE ADENYLATE REMARK 1 TITL 2 KINASE FROM SKELETAL MUSCLE REMARK 1 REF EUR.J.BIOCHEM. V. 43 131 1974 REMARK 1 REFN ASTM EJBCAI IX ISSN 0014-2956 REMARK 1 REFERENCE 7 REMARK 1 AUTH G.E.SCHULZ,K.BIEDERMANN,W.KABSCH,R.H.SCHIRMER REMARK 1 TITL LOW RESOLUTION STRUCTURE OF ADENYLATE KINASE REMARK 1 REF J.MOL.BIOL. V. 80 857 1973 REMARK 1 REFN ASTM JMOBAK UK ISSN 0022-2836 REMARK 1 REFERENCE 8 REMARK 1 EDIT R.J.FELDMANN REMARK 1 REF ATLAS OF MACROMOLECULAR 434 1976 REMARK 1 REF 2 STRUCTURE ON MICROFICHE REMARK 1 PUBL TRACOR JITCO INC.,ROCKVILLE,MD. REMARK 1 REFN ISBN 0-917934-01-6 REMARK 1 REFERENCE 9 REMARK 1 EDIT M.O.DAYHOFF REMARK 1 REF ATLAS OF PROTEIN SEQUENCE V. 5 90 1976 REMARK 1 REF 2 AND STRUCTURE,SUPPLEMENT 2 REMARK 1 PUBL NATIONAL BIOMEDICAL RESEARCH FOUNDATION, SILVER REMARK 1 PUBL 2 SPRING,MD. REMARK 1 REFN ISSN 0-912466-05-7 REMARK 2 REMARK 2 RESOLUTION. NULL ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NULL REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : NULL REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : NULL REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1519 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2ADK COMPLIES WITH FORMAT V. 2.3, 09-JULY-1998 REMARK 5 REMARK 5 2ADK CORRECTION. CHANGE ATOM NAME CD TO CD1 FOR ALL ILE REMARK 5 2ADK RESIDUES. 23-AUG-77. 2ADK REMARK 6 REMARK 6 2ADK CORRECTION. REFORMAT HEADER INFORMATION TO MEET NEW REMARK 6 2ADK SPECIFICATIONS. 2ADK 01-NOV-77. 2ADK REMARK 7 REMARK 7 2ADK CORRECTION. FIX HELIX RECORD AND INSERT MISSING ATOM REMARK 7 NZ 2ADK OF LYS 194 AS PER AUTHOR INSTRUCTIONS OF 20-APR-77. REMARK 7 2ADK 08-JUN-79. 2ADK REMARK 8 REMARK 8 2ADK CORRECTION. STANDARDIZE FORMAT OF SOURCE RECORD. 2ADK REMARK 8 05-MAR-80. 2ADK REMARK 9 REMARK 9 2ADK CORRECTION. STANDARDIZE NOMENCLATURE TO FOLLOW IUPAC- REMARK 9 IUB 2ADK RECOMMENDATIONS. INTERCHANGE CD1 AND CD2 FOR REMARK 9 LEUCINES 2ADK 5, 43, 73, 76, 115, 116, 129, 130, 150. REMARK 9 INTERCHANGE CG1 2ADK AND CG2 FOR VALINES 13, 29, 47, 67, REMARK 9 81, 118, 139, 160, 2ADK 182. 07-APR-80. 2ADK REMARK 10 REMARK 10 2ADK CORRECTION. STANDARDIZE FORMAT OF REMARK 3. 31-DEC-80. REMARK 10 2ADK REMARK 11 REMARK 11 2ADK CORRECTION. FIX FORMAT OF DATE IN REMARK 7. 15-JAN-82. REMARK 11 2ADK REMARK 12 REMARK 12 2ADK CORRECTION. CHANGE CODEN FOR REFERENCE 3. 01-MAR-82. REMARK 12 2ADK REMARK 13 REMARK 13 2ADK CORRECTION. INSERT REVDAT RECORDS. 30-SEP-83. 2ADK REMARK 14 REMARK 14 2ADK CORRECTION. THIS ENTRY IS OBSOLETE. 16-JAN-88. 2ADK REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.25 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,1/3+Z REMARK 290 3555 -X+Y,-X,2/3+Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,2/3-Z REMARK 290 6555 -X,-X+Y,1/3-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 1.000000 0.000000 0.000000 -47.30145 REMARK 290 SMTRY2 2 0.000000 -0.501271 0.865951 0.00000 REMARK 290 SMTRY3 2 0.000000 -0.866102 -0.498729 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 -94.60290 REMARK 290 SMTRY2 3 0.000000 -0.498729 -0.865951 0.00000 REMARK 290 SMTRY3 3 0.000000 0.866102 -0.501271 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -0.498729 0.867415 0.00000 REMARK 290 SMTRY3 4 0.000000 0.866102 0.498729 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 -94.60290 REMARK 290 SMTRY2 5 0.000000 -0.501271 -0.864480 0.00000 REMARK 290 SMTRY3 5 0.000000 -0.866102 0.501271 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 -47.30145 REMARK 290 SMTRY2 6 0.000000 1.000000 -0.002935 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT REMARK 300 WHICH CONSISTS OF 1 CHAIN(S). SEE REMARK 350 FOR REMARK 300 INFORMATION ON GENERATING THE BIOLOGICAL MOLECULE(S). REMARK 350 REMARK 350 GENERATING THE BIOMOLECULE REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN 24 OE1 NE2 REMARK 470 GLN 30 OE1 NE2 REMARK 470 HIS 36 ND1 CD2 CE1 NE2 REMARK 470 GLN 65 OE1 NE2 REMARK 470 GLN 101 OE1 NE2 REMARK 470 GLN 111 OE1 NE2 REMARK 470 ASN 142 OD1 ND2 REMARK 470 ASN 174 OD1 ND2 REMARK 470 GLN 185 OE1 NE2 REMARK 470 HIS 189 ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI REMARK 500 C LEU 57 CE MET 61 1.16 REMARK 500 CE LYS 21 OD2 ASP 93 1.47 REMARK 500 CG2 ILE 161 OE1 GLU 165 1.59 REMARK 500 O LEU 57 CE MET 61 1.63 REMARK 500 O GLY 40 CG ARG 44 1.79 REMARK 500 N SER 58 CE MET 61 1.83 REMARK 500 CD ARG 171 AE2 HIS 189 1.83 REMARK 500 O LYS 4 N SER 8 1.85 REMARK 500 O GLU 26 CG2 VAL 29 1.86 REMARK 500 O GLY 15 CZ TYR 153 1.88 REMARK 500 O ILE 161 CG GLU 165 1.88 REMARK 500 CA GLY 40 NH1 ARG 44 2.04 REMARK 500 O TYR 154 OE2 GLU 158 2.04 REMARK 500 CA LEU 57 CE MET 61 2.06 REMARK 500 O GLY 15 CE2 TYR 153 2.09 REMARK 500 O ALA 45 N SER 49 2.09 REMARK 500 O PHE 105 N ILE 109 2.10 REMARK 500 CG ARG 171 AE2 HIS 189 2.11 REMARK 500 C TYR 154 OE2 GLU 158 2.12 REMARK 500 O ARG 128 CG ARG 132 2.14 REMARK 500 O VAL 179 CG2 VAL 182 2.14 REMARK 500 CD1 LEU 5 CG2 ILE 109 2.15 REMARK 500 CB LYS 9 O LYS 88 2.15 REMARK 500 NZ LYS 21 OD2 ASP 93 2.17 REMARK 500 O MET 56 CG1 ILE 60 2.19 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 CD1 LEU 69 OD1 ASP 141 6765 0.55 REMARK 500 CD1 LEU 69 CG ASP 141 6765 1.04 REMARK 500 CG MET 56 CB ARG 138 6765 1.06 REMARK 500 N THR 71 CG ASP 140 6765 1.10 REMARK 500 N THR 71 OD2 ASP 140 6765 1.15 REMARK 500 CB MET 56 CG ARG 138 6765 1.24 REMARK 500 CG MET 56 CG ARG 138 6765 1.25 REMARK 500 CA THR 71 OD1 ASP 140 6765 1.25 REMARK 500 C GLU 70 OD2 ASP 140 6765 1.34 REMARK 500 CG PRO 68 O VAL 139 6765 1.41 REMARK 500 CG GLU 59 NH1 ARG 138 6765 1.46 REMARK 500 CA THR 71 CG ASP 140 6765 1.52 REMARK 500 CG LEU 69 OD1 ASP 141 6765 1.63 REMARK 500 CB GLU 59 NH1 ARG 138 6765 1.64 REMARK 500 NH2 ARG 44 CB LYS 63 6765 1.66 REMARK 500 CB GLU 59 NH2 ARG 138 6765 1.69 REMARK 500 OE1 GLU 2 CA SER 51 4555 1.71 REMARK 500 NH2 ARG 44 CA LYS 63 6765 1.71 REMARK 500 CB GLU 70 OD2 ASP 141 6765 1.71 REMARK 500 SD MET 56 CB ARG 138 6765 1.74 REMARK 500 CB GLU 59 CZ ARG 138 6765 1.74 REMARK 500 CD1 LEU 69 OD2 ASP 141 6765 1.81 REMARK 500 NH2 ARG 44 N LYS 63 6765 1.82 REMARK 500 N THR 71 OD1 ASP 140 6765 1.82 REMARK 500 N GLU 70 OD2 ASP 141 6765 1.85 REMARK 500 OE2 GLU 2 N ALA 52 4555 1.86 REMARK 500 CG GLU 70 OD2 ASP 140 6765 1.86 REMARK 500 CA MET 56 NE ARG 138 6765 1.88 REMARK 500 O LYS 55 NH2 ARG 138 6765 2.01 REMARK 500 C GLU 70 CG ASP 140 6765 2.02 REMARK 500 OG1 THR 71 CB ASP 140 6765 2.07 REMARK 500 N MET 56 NE ARG 138 6765 2.08 REMARK 500 SD MET 56 CA ARG 138 6765 2.08 REMARK 500 CA GLU 70 OD2 ASP 140 6765 2.08 REMARK 500 CG1 VAL 81 CG1 VAL 81 4555 2.09 REMARK 500 OE2 GLU 134 N ILE 169 6655 2.11 REMARK 500 OE2 GLU 2 CB ALA 52 4555 2.12 REMARK 500 CB PRO 68 O VAL 139 6765 2.12 REMARK 500 OE1 GLU 2 C SER 51 4555 2.17 REMARK 500 CA GLU 59 NH2 ARG 138 6765 2.17 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES: ENGH AND HUBER, 1991 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLY 133 C - N - CA ANGL. DEV. = 56.2 DEGREES REMARK 500 LYS 194 CD - CE - NZ ANGL. DEV. = 60.9 DEGREES REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER 19 -105.52 30.58 REMARK 500 SER 87 -115.04 66.59 REMARK 500 LYS 88 -74.49 85.78 REMARK 500 THR 135 -92.07 30.99 REMARK 500 VAL 139 -25.20 127.59 REMARK 500 ASP 140 -118.57 62.36 REMARK 500 ASN 142 -86.08 96.05 REMARK 500 ILE 169 36.61 119.84 REMARK 500 ALA 175 -119.61 113.20 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY 94 TYR 95 -118.93 REMARK 500 LEU 130 LYS 131 -136.99 SEQRES 1 195 ACE MET GLU GLU LYS LEU LYS LYS SER LYS ILE ILE PHE SEQRES 2 195 VAL VAL GLY GLY PRO GLY SER GLY LYS GLY THR GLN CYS SEQRES 3 195 GLU LYS ILE VAL GLN LYS TYR GLY TYR THR HIS LEU SER SEQRES 4 195 THR GLY ASP LEU LEU ARG ALA GLU VAL SER SER GLY SER SEQRES 5 195 ALA ARG GLY LYS MET LEU SER GLU ILE MET GLU LYS GLY SEQRES 6 195 GLN LEU VAL PRO LEU GLU THR VAL LEU ASP MET LEU ARG SEQRES 7 195 ASP ALA MET VAL ALA LYS VAL ASP THR SER LYS GLY PHE SEQRES 8 195 LEU ILE ASP GLY TYR PRO ARG GLU VAL LYS GLN GLY GLU SEQRES 9 195 GLU PHE GLU ARG LYS ILE GLY GLN PRO THR LEU LEU LEU SEQRES 10 195 TYR VAL ASP ALA GLY PRO GLU THR MET THR LYS ARG LEU SEQRES 11 195 LEU LYS ARG GLY GLU THR SER GLY ARG VAL ASP ASP ASN SEQRES 12 195 GLU GLU THR ILE LYS LYS ARG LEU GLU THR TYR TYR LYS SEQRES 13 195 ALA THR GLU PRO VAL ILE ALA PHE TYR GLU LYS ARG GLY SEQRES 14 195 ILE VAL ARG LYS VAL ASN ALA GLU GLY SER VAL ASP ASP SEQRES 15 195 VAL PHE SER GLN VAL CYS THR HIS LEU ASP THR LEU LYS FTNOTE 1 RESIDUES 139 THROUGH 142 CANNOT BE SEEN IN THE 3 ANGSTROM FTNOTE 1 ELECTRON DENSITY MAP INDICATING THAT THEY ARE FLEXIBLE. HET ACE 0 3 HETNAM ACE ACETYL GROUP FORMUL 1 ACE C2 H4 O HELIX 1 H1 MET 1 SER 8 1 8 HELIX 2 H2 THR 23 GLN 30 1 8 HELIX 3 H3 ASP 41 SER 48 1 8 HELIX 4 H4 ARG 53 GLU 62 1 10 HELIX 5 H5 LEU 69 VAL 84 1 16 HELIX 6 H6 LYS 100 ARG 107 1 8 HELIX 7 H7 GLU 123 GLY 133 1 11 HELIX 8 H8 GLU 144 GLU 158 1 15 HELIX 9 H9 VAL 160 TYR 164 1 5 HELIX 10 H10 VAL 179 LYS 194 1 16 SHEET 1 S1 5 THR 35 SER 38 0 SHEET 2 S1 5 PHE 90 GLY 94 1 SHEET 3 S1 5 ILE 10 VAL 14 1 SHEET 4 S1 5 LEU 114 VAL 118 1 SHEET 5 S1 5 ILE 169 VAL 173 1 CRYST1 48.500 48.500 141.000 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.000000 0.000000 -0.023600 1.65500 SCALE2 0.000000 -0.020440 -0.011770 1.87400 SCALE3 -0.007047 0.000000 0.000000 0.33400 HETATM 1 C ACE 0 54.300 25.800 36.200 1.00 0.00 C HETATM 2 O ACE 0 55.600 25.800 35.950 1.00 0.00 O HETATM 3 CH3 ACE 0 53.350 26.350 35.050 1.00 0.00 C