HEADER OXIDOREDUCTASE 26-JAN-99 2AE2 TITLE TROPINONE REDUCTASE-II COMPLEXED WITH NADP+ AND PSEUDOTROPINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN (TROPINONE REDUCTASE-II); COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.1.1.236; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DATURA STRAMONIUM; SOURCE 3 ORGANISM_COMMON: JIMSONWEED; SOURCE 4 ORGANISM_TAXID: 4076; SOURCE 5 ORGAN: CULTURED ROOT; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PET21D; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PETTR2 KEYWDS OXIDOREDUCTASE, TROPANE ALKALOID BIOSYNTHESIS, REDUCTION OF TROPINONE KEYWDS 2 TO PSEUDOTROPINE, SHORT-CHAIN DEHYDROGENASE EXPDTA X-RAY DIFFRACTION AUTHOR A.YAMASHITA,H.KATO,S.WAKATSUKI,T.TOMIZAKI,T.NAKATSU,K.NAKAJIMA, AUTHOR 2 T.HASHIMOTO,Y.YAMADA,J.ODA REVDAT 5 23-AUG-23 2AE2 1 REMARK REVDAT 4 30-OCT-19 2AE2 1 JRNL SEQADV REVDAT 3 24-FEB-09 2AE2 1 VERSN REVDAT 2 22-DEC-99 2AE2 1 JRNL REVDAT 1 02-FEB-99 2AE2 0 JRNL AUTH A.YAMASHITA,H.KATO,S.WAKATSUKI,T.TOMIZAKI,T.NAKATSU, JRNL AUTH 2 K.NAKAJIMA,T.HASHIMOTO,Y.YAMADA,J.ODA JRNL TITL STRUCTURE OF TROPINONE REDUCTASE-II COMPLEXED WITH NADP+ AND JRNL TITL 2 PSEUDOTROPINE AT 1.9 A RESOLUTION: IMPLICATION FOR JRNL TITL 3 STEREOSPECIFIC SUBSTRATE BINDING AND CATALYSIS. JRNL REF BIOCHEMISTRY V. 38 7630 1999 JRNL REFN ISSN 0006-2960 JRNL PMID 10387002 JRNL DOI 10.1021/BI9825044 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH K.NAKAJIMA,A.YAMASHITA,H.AKAMA,T.NAKATSU,H.KATO,T.HASHIMOTO, REMARK 1 AUTH 2 J.ODA,Y.YAMADA REMARK 1 TITL CRYSTAL STRUCTURES OF TWO TROPINONE REDUCTASES: DIFFERENT REMARK 1 TITL 2 REACTION STEREOSPECIFICITIES IN THE SAME PROTEIN FOLD. REMARK 1 REF PROC.NATL.ACAD.SCI.USA V. 95 4876 1998 REMARK 1 REFN ISSN 0027-8424 REMARK 1 PMID 9560196 REMARK 1 DOI 10.1073/PNAS.95.9.4876 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.851 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 10.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 82.9 REMARK 3 NUMBER OF REFLECTIONS : 51904 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.206 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2630 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 8 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.99 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 69.20 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 5307 REMARK 3 BIN R VALUE (WORKING SET) : 0.2470 REMARK 3 BIN FREE R VALUE : 0.2700 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 3.91 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 300 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3950 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 116 REMARK 3 SOLVENT ATOMS : 236 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.18 REMARK 3 ESD FROM SIGMAA (A) : 0.21 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.21 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.22 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.275 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.83 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.806 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : UNRESTRAINED REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : NAP_IN_1CYD.PAR REMARK 3 PARAMETER FILE 3 : PARAM.PTO REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : TOPHCSDX.PRO REMARK 3 TOPOLOGY FILE 2 : TOPH19.SOL REMARK 3 TOPOLOGY FILE 3 : NAP_IN_1CYD.TOP REMARK 3 TOPOLOGY FILE 4 : TOPOLOGY.PTO REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2AE2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-JAN-99. REMARK 100 THE DEPOSITION ID IS D_1000000387. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-JUL-97 REMARK 200 TEMPERATURE (KELVIN) : 293 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 54120 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 64.200 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 85.6 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.08400 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.93 REMARK 200 COMPLETENESS FOR SHELL (%) : 77.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.24700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 2AE1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 7.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 112.76667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 225.53333 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 169.15000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 281.91667 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 56.38333 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 112.76667 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 225.53333 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 281.91667 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 169.15000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 56.38333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5980 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20360 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 21870 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30810 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -99.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 -0.866025 0.000000 44.30000 REMARK 350 BIOMT2 2 -0.866025 -0.500000 0.000000 76.72985 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 281.91667 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6920 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19410 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 0.500000 -0.866025 0.000000 44.30000 REMARK 350 BIOMT2 2 -0.866025 -0.500000 0.000000 76.72985 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 281.91667 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 MET B 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 137 -14.72 73.97 REMARK 500 ARG A 138 82.02 -150.14 REMARK 500 SER A 145 -134.59 -92.83 REMARK 500 ALA A 193 99.66 -66.79 REMARK 500 CYS A 258 -64.21 -133.80 REMARK 500 SER B 40 -179.89 -170.97 REMARK 500 GLU B 137 -6.83 72.80 REMARK 500 ARG B 138 76.08 -151.42 REMARK 500 SER B 145 -135.16 -93.25 REMARK 500 ALA B 240 32.09 -93.58 REMARK 500 CYS B 258 -62.87 -130.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAP A 261 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PTO A 262 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAP B 261 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PTO B 262 DBREF 2AE2 A 2 260 UNP P50163 TRN2_DATST 2 260 DBREF 2AE2 B 2 260 UNP P50163 TRN2_DATST 2 260 SEQADV 2AE2 MET A 1 UNP P50163 MET 1 DELETION SEQADV 2AE2 MET B 1 UNP P50163 MET 1 DELETION SEQRES 1 A 260 MET ALA GLY ARG TRP ASN LEU GLU GLY CYS THR ALA LEU SEQRES 2 A 260 VAL THR GLY GLY SER ARG GLY ILE GLY TYR GLY ILE VAL SEQRES 3 A 260 GLU GLU LEU ALA SER LEU GLY ALA SER VAL TYR THR CYS SEQRES 4 A 260 SER ARG ASN GLN LYS GLU LEU ASN ASP CYS LEU THR GLN SEQRES 5 A 260 TRP ARG SER LYS GLY PHE LYS VAL GLU ALA SER VAL CYS SEQRES 6 A 260 ASP LEU SER SER ARG SER GLU ARG GLN GLU LEU MET ASN SEQRES 7 A 260 THR VAL ALA ASN HIS PHE HIS GLY LYS LEU ASN ILE LEU SEQRES 8 A 260 VAL ASN ASN ALA GLY ILE VAL ILE TYR LYS GLU ALA LYS SEQRES 9 A 260 ASP TYR THR VAL GLU ASP TYR SER LEU ILE MET SER ILE SEQRES 10 A 260 ASN PHE GLU ALA ALA TYR HIS LEU SER VAL LEU ALA HIS SEQRES 11 A 260 PRO PHE LEU LYS ALA SER GLU ARG GLY ASN VAL VAL PHE SEQRES 12 A 260 ILE SER SER VAL SER GLY ALA LEU ALA VAL PRO TYR GLU SEQRES 13 A 260 ALA VAL TYR GLY ALA THR LYS GLY ALA MET ASP GLN LEU SEQRES 14 A 260 THR ARG CYS LEU ALA PHE GLU TRP ALA LYS ASP ASN ILE SEQRES 15 A 260 ARG VAL ASN GLY VAL GLY PRO GLY VAL ILE ALA THR SER SEQRES 16 A 260 LEU VAL GLU MET THR ILE GLN ASP PRO GLU GLN LYS GLU SEQRES 17 A 260 ASN LEU ASN LYS LEU ILE ASP ARG CYS ALA LEU ARG ARG SEQRES 18 A 260 MET GLY GLU PRO LYS GLU LEU ALA ALA MET VAL ALA PHE SEQRES 19 A 260 LEU CYS PHE PRO ALA ALA SER TYR VAL THR GLY GLN ILE SEQRES 20 A 260 ILE TYR VAL ASP GLY GLY LEU MET ALA ASN CYS GLY PHE SEQRES 1 B 260 MET ALA GLY ARG TRP ASN LEU GLU GLY CYS THR ALA LEU SEQRES 2 B 260 VAL THR GLY GLY SER ARG GLY ILE GLY TYR GLY ILE VAL SEQRES 3 B 260 GLU GLU LEU ALA SER LEU GLY ALA SER VAL TYR THR CYS SEQRES 4 B 260 SER ARG ASN GLN LYS GLU LEU ASN ASP CYS LEU THR GLN SEQRES 5 B 260 TRP ARG SER LYS GLY PHE LYS VAL GLU ALA SER VAL CYS SEQRES 6 B 260 ASP LEU SER SER ARG SER GLU ARG GLN GLU LEU MET ASN SEQRES 7 B 260 THR VAL ALA ASN HIS PHE HIS GLY LYS LEU ASN ILE LEU SEQRES 8 B 260 VAL ASN ASN ALA GLY ILE VAL ILE TYR LYS GLU ALA LYS SEQRES 9 B 260 ASP TYR THR VAL GLU ASP TYR SER LEU ILE MET SER ILE SEQRES 10 B 260 ASN PHE GLU ALA ALA TYR HIS LEU SER VAL LEU ALA HIS SEQRES 11 B 260 PRO PHE LEU LYS ALA SER GLU ARG GLY ASN VAL VAL PHE SEQRES 12 B 260 ILE SER SER VAL SER GLY ALA LEU ALA VAL PRO TYR GLU SEQRES 13 B 260 ALA VAL TYR GLY ALA THR LYS GLY ALA MET ASP GLN LEU SEQRES 14 B 260 THR ARG CYS LEU ALA PHE GLU TRP ALA LYS ASP ASN ILE SEQRES 15 B 260 ARG VAL ASN GLY VAL GLY PRO GLY VAL ILE ALA THR SER SEQRES 16 B 260 LEU VAL GLU MET THR ILE GLN ASP PRO GLU GLN LYS GLU SEQRES 17 B 260 ASN LEU ASN LYS LEU ILE ASP ARG CYS ALA LEU ARG ARG SEQRES 18 B 260 MET GLY GLU PRO LYS GLU LEU ALA ALA MET VAL ALA PHE SEQRES 19 B 260 LEU CYS PHE PRO ALA ALA SER TYR VAL THR GLY GLN ILE SEQRES 20 B 260 ILE TYR VAL ASP GLY GLY LEU MET ALA ASN CYS GLY PHE HET NAP A 261 48 HET PTO A 262 10 HET NAP B 261 48 HET PTO B 262 10 HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETNAM PTO PSEUDOTROPINE HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE FORMUL 3 NAP 2(C21 H28 N7 O17 P3) FORMUL 4 PTO 2(C8 H15 N O) FORMUL 7 HOH *236(H2 O) HELIX 1 BA GLY A 20 SER A 31 1 12 HELIX 2 CA GLN A 43 SER A 55 1 13 HELIX 3 DA ARG A 70 HIS A 83 1 14 HELIX 4 T0A ALA A 103 ASP A 105 5 3 HELIX 5 E1A VAL A 108 ASN A 118 1 11 HELIX 6 E2A GLU A 120 ALA A 135 1 16 HELIX 7 T1A VAL A 147 GLY A 149 5 3 HELIX 8 F1A ALA A 157 GLU A 176 1 20 HELIX 9 F2A ALA A 178 ASP A 180 5 3 HELIX 10 GDA SER A 195 THR A 200 1 6 HELIX 11 GPA PRO A 204 ASP A 215 1 12 HELIX 12 GA PRO A 225 CYS A 236 1 12 HELIX 13 T2A PRO A 238 ALA A 240 5 3 HELIX 14 T3A LEU A 254 ALA A 256 5 3 HELIX 15 BB GLY B 20 SER B 31 1 12 HELIX 16 CB GLN B 43 SER B 55 1 13 HELIX 17 DB ARG B 70 HIS B 83 1 14 HELIX 18 T0B ALA B 103 ASP B 105 5 3 HELIX 19 E1B VAL B 108 ASN B 118 1 11 HELIX 20 E2B GLU B 120 ALA B 135 1 16 HELIX 21 T1B VAL B 147 GLY B 149 5 3 HELIX 22 F1B ALA B 157 GLU B 176 1 20 HELIX 23 F2B ALA B 178 ASP B 180 5 3 HELIX 24 GDB SER B 195 THR B 200 1 6 HELIX 25 GPB PRO B 204 ASP B 215 1 12 HELIX 26 GB PRO B 225 CYS B 236 1 12 HELIX 27 T2B PRO B 238 ALA B 240 5 3 HELIX 28 T3B LEU B 254 ALA B 256 5 3 SHEET 1 S1A 7 LYS A 59 VAL A 64 0 SHEET 2 S1A 7 SER A 35 SER A 40 1 N THR A 38 O GLU A 61 SHEET 3 S1A 7 THR A 11 THR A 15 1 N VAL A 14 O TYR A 37 SHEET 4 S1A 7 ILE A 90 ASN A 93 1 N VAL A 92 O LEU A 13 SHEET 5 S1A 7 GLY A 139 ILE A 144 1 N VAL A 142 O LEU A 91 SHEET 6 S1A 7 ILE A 182 PRO A 189 1 N ASN A 185 O VAL A 141 SHEET 7 S1A 7 ILE A 247 VAL A 250 1 N ILE A 248 O GLY A 186 SHEET 1 S1B 7 LYS B 59 VAL B 64 0 SHEET 2 S1B 7 SER B 35 SER B 40 1 N THR B 38 O GLU B 61 SHEET 3 S1B 7 THR B 11 THR B 15 1 N VAL B 14 O TYR B 37 SHEET 4 S1B 7 ILE B 90 ASN B 93 1 N VAL B 92 O LEU B 13 SHEET 5 S1B 7 GLY B 139 ILE B 144 1 N VAL B 142 O LEU B 91 SHEET 6 S1B 7 ILE B 182 PRO B 189 1 N ASN B 185 O VAL B 141 SHEET 7 S1B 7 ILE B 247 VAL B 250 1 N ILE B 248 O GLY B 186 SITE 1 AC1 32 GLY A 16 SER A 18 ARG A 19 GLY A 20 SITE 2 AC1 32 ILE A 21 SER A 40 ARG A 41 CYS A 65 SITE 3 AC1 32 ASP A 66 LEU A 67 ASN A 94 GLY A 96 SITE 4 AC1 32 ILE A 117 ILE A 144 SER A 145 SER A 146 SITE 5 AC1 32 TYR A 159 LYS A 163 PRO A 189 GLY A 190 SITE 6 AC1 32 VAL A 191 ILE A 192 THR A 194 SER A 195 SITE 7 AC1 32 LEU A 196 VAL A 197 PTO A 262 HOH A 287 SITE 8 AC1 32 HOH A 291 HOH A 297 HOH A 311 HOH B 353 SITE 1 AC2 6 TYR A 100 SER A 146 GLU A 156 TYR A 159 SITE 2 AC2 6 LEU A 196 NAP A 261 SITE 1 AC3 32 GLY B 16 SER B 18 ARG B 19 GLY B 20 SITE 2 AC3 32 ILE B 21 SER B 40 ARG B 41 CYS B 65 SITE 3 AC3 32 ASP B 66 LEU B 67 ASN B 94 GLY B 96 SITE 4 AC3 32 ILE B 117 ILE B 144 SER B 145 SER B 146 SITE 5 AC3 32 TYR B 159 LYS B 163 PRO B 189 GLY B 190 SITE 6 AC3 32 VAL B 191 ILE B 192 THR B 194 SER B 195 SITE 7 AC3 32 LEU B 196 VAL B 197 PTO B 262 HOH B 266 SITE 8 AC3 32 HOH B 274 HOH B 277 HOH B 279 HOH B 283 SITE 1 AC4 6 TYR B 100 SER B 146 GLU B 156 TYR B 159 SITE 2 AC4 6 LEU B 196 NAP B 261 CRYST1 88.600 88.600 338.300 90.00 90.00 120.00 P 61 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011287 0.006516 0.000000 0.00000 SCALE2 0.000000 0.013033 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002956 0.00000 MTRIX1 1 -0.891370 0.190740 -0.411180 95.76153 1 MTRIX2 1 0.187390 -0.670930 -0.717450 159.28313 1 MTRIX3 1 -0.412720 -0.716570 0.562310 98.29375 1