data_2AED # _entry.id 2AED # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.280 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2AED RCSB RCSB033792 WWPDB D_1000033792 # _pdbx_database_PDB_obs_spr.id OBSLTE _pdbx_database_PDB_obs_spr.date 2012-02-29 _pdbx_database_PDB_obs_spr.pdb_id 4DRZ _pdbx_database_PDB_obs_spr.replace_pdb_id 2AED _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_status.entry_id 2AED _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2005-07-22 _pdbx_database_status.status_code OBS _pdbx_database_status.status_code_sf OBS _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wang, J.' 1 'Tempel, W.' 2 'Arrowsmith, C.' 3 'Edwards, A.' 4 'Sundstrom, M.' 5 'Weigelt, J.' 6 'Bochkarev, A.' 7 'Park, H.' 8 'Structural Genomics Consortium (SGC)' 9 # _citation.id primary _citation.title 'Crystal structure of human RAB14' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Wang, J.' 1 primary 'Tempel, W.' 2 primary 'Arrowsmith, C.' 3 primary 'Edwards, A.' 4 primary 'Sundstrom, M.' 5 primary 'Weigelt, J.' 6 primary 'Bochkarev, A.' 7 primary 'Park, H.' 8 primary 'Structural Genomics Consortium (SGC)' 9 # _cell.entry_id 2AED _cell.length_a 42.686 _cell.length_b 40.487 _cell.length_c 46.486 _cell.angle_alpha 90.00 _cell.angle_beta 108.95 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2AED _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ras-related protein Rab-14' 22393.287 1 ? ? ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 3 non-polymer syn "GUANOSINE-5'-DIPHOSPHATE" 443.201 1 ? ? ? ? 4 non-polymer syn 'UNKNOWN ATOM OR ION' ? 2 ? ? ? ? 5 water nat water 18.015 42 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name RAB14 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MGSSHHHHHHSSGLVPRGSMATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIK LQIWDTAGQGRFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQ FAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSL ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSSHHHHHHSSGLVPRGSMATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIK LQIWDTAGQGRFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQ FAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 SER n 1 12 SER n 1 13 GLY n 1 14 LEU n 1 15 VAL n 1 16 PRO n 1 17 ARG n 1 18 GLY n 1 19 SER n 1 20 MET n 1 21 ALA n 1 22 THR n 1 23 ALA n 1 24 PRO n 1 25 TYR n 1 26 ASN n 1 27 TYR n 1 28 SER n 1 29 TYR n 1 30 ILE n 1 31 PHE n 1 32 LYS n 1 33 TYR n 1 34 ILE n 1 35 ILE n 1 36 ILE n 1 37 GLY n 1 38 ASP n 1 39 MET n 1 40 GLY n 1 41 VAL n 1 42 GLY n 1 43 LYS n 1 44 SER n 1 45 CYS n 1 46 LEU n 1 47 LEU n 1 48 HIS n 1 49 GLN n 1 50 PHE n 1 51 THR n 1 52 GLU n 1 53 LYS n 1 54 LYS n 1 55 PHE n 1 56 MET n 1 57 ALA n 1 58 ASP n 1 59 CYS n 1 60 PRO n 1 61 HIS n 1 62 THR n 1 63 ILE n 1 64 GLY n 1 65 VAL n 1 66 GLU n 1 67 PHE n 1 68 GLY n 1 69 THR n 1 70 ARG n 1 71 ILE n 1 72 ILE n 1 73 GLU n 1 74 VAL n 1 75 SER n 1 76 GLY n 1 77 GLN n 1 78 LYS n 1 79 ILE n 1 80 LYS n 1 81 LEU n 1 82 GLN n 1 83 ILE n 1 84 TRP n 1 85 ASP n 1 86 THR n 1 87 ALA n 1 88 GLY n 1 89 GLN n 1 90 GLY n 1 91 ARG n 1 92 PHE n 1 93 ARG n 1 94 ALA n 1 95 VAL n 1 96 THR n 1 97 ARG n 1 98 SER n 1 99 TYR n 1 100 TYR n 1 101 ARG n 1 102 GLY n 1 103 ALA n 1 104 ALA n 1 105 GLY n 1 106 ALA n 1 107 LEU n 1 108 MET n 1 109 VAL n 1 110 TYR n 1 111 ASP n 1 112 ILE n 1 113 THR n 1 114 ARG n 1 115 ARG n 1 116 SER n 1 117 THR n 1 118 TYR n 1 119 ASN n 1 120 HIS n 1 121 LEU n 1 122 SER n 1 123 SER n 1 124 TRP n 1 125 LEU n 1 126 THR n 1 127 ASP n 1 128 ALA n 1 129 ARG n 1 130 ASN n 1 131 LEU n 1 132 THR n 1 133 ASN n 1 134 PRO n 1 135 ASN n 1 136 THR n 1 137 VAL n 1 138 ILE n 1 139 ILE n 1 140 LEU n 1 141 ILE n 1 142 GLY n 1 143 ASN n 1 144 LYS n 1 145 ALA n 1 146 ASP n 1 147 LEU n 1 148 GLU n 1 149 ALA n 1 150 GLN n 1 151 ARG n 1 152 ASP n 1 153 VAL n 1 154 THR n 1 155 TYR n 1 156 GLU n 1 157 GLU n 1 158 ALA n 1 159 LYS n 1 160 GLN n 1 161 PHE n 1 162 ALA n 1 163 GLU n 1 164 GLU n 1 165 ASN n 1 166 GLY n 1 167 LEU n 1 168 LEU n 1 169 PHE n 1 170 LEU n 1 171 GLU n 1 172 ALA n 1 173 SER n 1 174 ALA n 1 175 LYS n 1 176 THR n 1 177 GLY n 1 178 GLU n 1 179 ASN n 1 180 VAL n 1 181 GLU n 1 182 ASP n 1 183 ALA n 1 184 PHE n 1 185 LEU n 1 186 GLU n 1 187 ALA n 1 188 ALA n 1 189 LYS n 1 190 LYS n 1 191 ILE n 1 192 TYR n 1 193 GLN n 1 194 ASN n 1 195 ILE n 1 196 GLN n 1 197 ASP n 1 198 GLY n 1 199 SER n 1 200 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene RAB14 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name p28a-LIC _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RAB14_HUMAN _struct_ref.pdbx_db_accession P61106 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSY YRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGEN VEDAFLEAAKKIYQNIQDGSL ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2AED _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 20 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 200 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P61106 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 181 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 181 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2AED MET A 1 ? UNP P61106 ? ? 'EXPRESSION TAG' -18 1 1 2AED GLY A 2 ? UNP P61106 ? ? 'EXPRESSION TAG' -17 2 1 2AED SER A 3 ? UNP P61106 ? ? 'EXPRESSION TAG' -16 3 1 2AED SER A 4 ? UNP P61106 ? ? 'EXPRESSION TAG' -15 4 1 2AED HIS A 5 ? UNP P61106 ? ? 'EXPRESSION TAG' -14 5 1 2AED HIS A 6 ? UNP P61106 ? ? 'EXPRESSION TAG' -13 6 1 2AED HIS A 7 ? UNP P61106 ? ? 'EXPRESSION TAG' -12 7 1 2AED HIS A 8 ? UNP P61106 ? ? 'EXPRESSION TAG' -11 8 1 2AED HIS A 9 ? UNP P61106 ? ? 'EXPRESSION TAG' -10 9 1 2AED HIS A 10 ? UNP P61106 ? ? 'EXPRESSION TAG' -9 10 1 2AED SER A 11 ? UNP P61106 ? ? 'EXPRESSION TAG' -8 11 1 2AED SER A 12 ? UNP P61106 ? ? 'EXPRESSION TAG' -7 12 1 2AED GLY A 13 ? UNP P61106 ? ? 'EXPRESSION TAG' -6 13 1 2AED LEU A 14 ? UNP P61106 ? ? 'EXPRESSION TAG' -5 14 1 2AED VAL A 15 ? UNP P61106 ? ? 'EXPRESSION TAG' -4 15 1 2AED PRO A 16 ? UNP P61106 ? ? 'EXPRESSION TAG' -3 16 1 2AED ARG A 17 ? UNP P61106 ? ? 'EXPRESSION TAG' -2 17 1 2AED GLY A 18 ? UNP P61106 ? ? 'EXPRESSION TAG' -1 18 1 2AED SER A 19 ? UNP P61106 ? ? 'EXPRESSION TAG' 0 19 1 2AED GLY A 90 ? UNP P61106 GLU 71 'ENGINEERED MUTATION' 71 20 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GDP 'RNA linking' n "GUANOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O11 P2' 443.201 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 UNX non-polymer . 'UNKNOWN ATOM OR ION' ? ? ? VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2AED _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.2 _exptl_crystal.density_percent_sol 43.7 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.2 _exptl_crystal_grow.pdbx_details '20% PEG-3350, 0.2M calcium acetate, pH 7.2, hanging drop, temperature 291K, VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type SBC-3 _diffrn_detector.pdbx_collection_date 2005-06-30 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97901 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-BM' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-BM _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97901 # _reflns.entry_id 2AED _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30.00 _reflns.d_resolution_high 2.30 _reflns.number_obs 6885 _reflns.number_all ? _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs 0.134 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.200 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_unique_obs _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.30 2.38 ? 0.403 ? ? 2.600 ? ? ? ? ? ? 1 1 2.38 2.48 ? 0.372 ? ? 2.700 ? ? ? ? ? ? 2 1 2.48 2.59 ? 0.31 ? ? 3.000 ? ? ? ? ? ? 3 1 2.59 2.73 ? 0.277 ? ? 3.200 ? ? ? ? ? ? 4 1 2.73 2.90 ? 0.249 ? ? 3.400 ? ? ? ? ? ? 5 1 2.90 3.12 ? 0.179 ? ? 3.600 ? ? ? ? ? ? 6 1 3.12 3.43 ? 0.14 ? ? 3.600 ? ? ? ? ? ? 7 1 3.43 3.93 ? 0.1 ? ? 3.500 ? ? ? ? ? ? 8 1 3.93 4.95 ? 0.086 ? ? 3.400 ? ? ? ? ? ? 9 1 4.95 30.00 ? 0.115 ? ? 3.300 ? ? ? ? ? ? 10 1 # _refine.entry_id 2AED _refine.ls_number_reflns_obs 6222 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.76 _refine.ls_d_res_high 2.30 _refine.ls_percent_reflns_obs 95.78 _refine.ls_R_factor_obs 0.18004 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.17583 _refine.ls_R_factor_R_free 0.26547 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 312 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.950 _refine.correlation_coeff_Fo_to_Fc_free 0.891 _refine.B_iso_mean 26.270 _refine.aniso_B[1][1] 0.48 _refine.aniso_B[2][2] -2.80 _refine.aniso_B[3][3] 3.77 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 2.23 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'pdb entry 1OIV' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.430 _refine.pdbx_overall_ESU_R_Free 0.283 _refine.overall_SU_ML 0.180 _refine.overall_SU_B 13.389 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1186 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 31 _refine_hist.number_atoms_solvent 42 _refine_hist.number_atoms_total 1259 _refine_hist.d_res_high 2.30 _refine_hist.d_res_low 19.76 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.016 0.022 ? 1235 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 1094 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.365 1.971 ? 1677 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.770 3.000 ? 2519 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.985 5.000 ? 150 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 37.545 24.464 ? 56 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 14.959 15.000 ? 198 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 19.564 15.000 ? 6 'X-RAY DIFFRACTION' ? r_chiral_restr 0.071 0.200 ? 190 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.020 ? 1365 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 259 'X-RAY DIFFRACTION' ? r_nbd_refined 0.190 0.200 ? 238 'X-RAY DIFFRACTION' ? r_nbd_other 0.186 0.200 ? 1113 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.182 0.200 ? 593 'X-RAY DIFFRACTION' ? r_nbtor_other 0.084 0.200 ? 704 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.162 0.200 ? 57 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.088 0.200 ? 8 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.164 0.200 ? 46 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.170 0.200 ? 13 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 2.108 2.000 ? 780 'X-RAY DIFFRACTION' ? r_mcbond_other 0.582 2.000 ? 318 'X-RAY DIFFRACTION' ? r_mcangle_it 3.055 3.000 ? 1196 'X-RAY DIFFRACTION' ? r_scbond_it 1.891 2.000 ? 552 'X-RAY DIFFRACTION' ? r_scangle_it 2.740 3.000 ? 481 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.300 _refine_ls_shell.d_res_low 2.360 _refine_ls_shell.number_reflns_R_work 407 _refine_ls_shell.R_factor_R_work 0.175 _refine_ls_shell.percent_reflns_obs 83.24 _refine_ls_shell.R_factor_R_free 0.248 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 20 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _struct.entry_id 2AED _struct.title 'Crystal structure of human RAB14' _struct.pdbx_descriptor 'Ras-related protein Rab-14' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text 'RAS, GTPase, GTP, oncogene, RAB14, structural genomics, Structural Genomics Consortium, SGC, PROTEIN TRANSPORT' _struct_keywords.entry_id 2AED _struct_keywords.pdbx_keywords 'PROTEIN TRANSPORT' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 42 ? LYS A 53 ? GLY A 23 LYS A 34 1 ? 12 HELX_P HELX_P2 2 ALA A 94 ? GLY A 102 ? ALA A 75 GLY A 83 1 ? 9 HELX_P HELX_P3 3 ARG A 114 ? HIS A 120 ? ARG A 95 HIS A 101 1 ? 7 HELX_P HELX_P4 4 HIS A 120 ? LEU A 131 ? HIS A 101 LEU A 112 1 ? 12 HELX_P HELX_P5 5 LEU A 147 ? ARG A 151 ? LEU A 128 ARG A 132 5 ? 5 HELX_P HELX_P6 6 THR A 154 ? ASN A 165 ? THR A 135 ASN A 146 1 ? 12 HELX_P HELX_P7 7 ASN A 179 ? GLN A 193 ? ASN A 160 GLN A 174 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? B MG . MG ? ? ? 1_555 C GDP . O1B ? ? A MG 201 A GDP 202 1_555 ? ? ? ? ? ? ? 2.227 ? metalc2 metalc ? ? A ASP 85 OD2 ? ? ? 1_555 B MG . MG ? ? A ASP 66 A MG 201 1_555 ? ? ? ? ? ? ? 2.307 ? metalc3 metalc ? ? B MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 201 A HOH 338 1_555 ? ? ? ? ? ? ? 2.320 ? metalc4 metalc ? ? A SER 44 OG ? ? ? 1_555 B MG . MG ? ? A SER 25 A MG 201 1_555 ? ? ? ? ? ? ? 2.364 ? metalc5 metalc ? ? B MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 201 A HOH 322 1_555 ? ? ? ? ? ? ? 2.539 ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 67 ? VAL A 74 ? PHE A 48 VAL A 55 A 2 GLN A 77 ? ASP A 85 ? GLN A 58 ASP A 66 A 3 TYR A 29 ? GLY A 37 ? TYR A 10 GLY A 18 A 4 ALA A 103 ? ASP A 111 ? ALA A 84 ASP A 92 A 5 VAL A 137 ? ASN A 143 ? VAL A 118 ASN A 124 A 6 LEU A 168 ? GLU A 171 ? LEU A 149 GLU A 152 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLY A 68 ? N GLY A 49 O ILE A 83 ? O ILE A 64 A 2 3 O GLN A 82 ? O GLN A 63 N TYR A 33 ? N TYR A 14 A 3 4 N ILE A 36 ? N ILE A 17 O VAL A 109 ? O VAL A 90 A 4 5 N MET A 108 ? N MET A 89 O ILE A 141 ? O ILE A 122 A 5 6 N LEU A 140 ? N LEU A 121 O LEU A 168 ? O LEU A 149 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE MG A 201' AC2 Software ? ? ? ? 19 'BINDING SITE FOR RESIDUE GDP A 202' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 SER A 44 ? SER A 25 . ? 1_555 ? 2 AC1 5 ASP A 85 ? ASP A 66 . ? 1_555 ? 3 AC1 5 GDP C . ? GDP A 202 . ? 1_555 ? 4 AC1 5 HOH F . ? HOH A 322 . ? 1_555 ? 5 AC1 5 HOH F . ? HOH A 338 . ? 1_555 ? 6 AC2 19 GLY A 40 ? GLY A 21 . ? 1_555 ? 7 AC2 19 VAL A 41 ? VAL A 22 . ? 1_555 ? 8 AC2 19 GLY A 42 ? GLY A 23 . ? 1_555 ? 9 AC2 19 LYS A 43 ? LYS A 24 . ? 1_555 ? 10 AC2 19 SER A 44 ? SER A 25 . ? 1_555 ? 11 AC2 19 CYS A 45 ? CYS A 26 . ? 1_555 ? 12 AC2 19 ASP A 85 ? ASP A 66 . ? 1_555 ? 13 AC2 19 ASN A 143 ? ASN A 124 . ? 1_555 ? 14 AC2 19 LYS A 144 ? LYS A 125 . ? 1_555 ? 15 AC2 19 ASP A 146 ? ASP A 127 . ? 1_555 ? 16 AC2 19 LEU A 147 ? LEU A 128 . ? 1_555 ? 17 AC2 19 SER A 173 ? SER A 154 . ? 1_555 ? 18 AC2 19 ALA A 174 ? ALA A 155 . ? 1_555 ? 19 AC2 19 LYS A 175 ? LYS A 156 . ? 1_555 ? 20 AC2 19 MG B . ? MG A 201 . ? 1_555 ? 21 AC2 19 HOH F . ? HOH A 314 . ? 1_555 ? 22 AC2 19 HOH F . ? HOH A 316 . ? 1_555 ? 23 AC2 19 HOH F . ? HOH A 322 . ? 1_555 ? 24 AC2 19 HOH F . ? HOH A 326 . ? 1_555 ? # _atom_sites.entry_id 2AED _atom_sites.fract_transf_matrix[1][1] 0.023427 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.008044 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.024699 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.022745 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S X # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -18 ? ? ? A . n A 1 2 GLY 2 -17 ? ? ? A . n A 1 3 SER 3 -16 ? ? ? A . n A 1 4 SER 4 -15 ? ? ? A . n A 1 5 HIS 5 -14 ? ? ? A . n A 1 6 HIS 6 -13 ? ? ? A . n A 1 7 HIS 7 -12 ? ? ? A . n A 1 8 HIS 8 -11 ? ? ? A . n A 1 9 HIS 9 -10 ? ? ? A . n A 1 10 HIS 10 -9 ? ? ? A . n A 1 11 SER 11 -8 ? ? ? A . n A 1 12 SER 12 -7 ? ? ? A . n A 1 13 GLY 13 -6 ? ? ? A . n A 1 14 LEU 14 -5 ? ? ? A . n A 1 15 VAL 15 -4 ? ? ? A . n A 1 16 PRO 16 -3 ? ? ? A . n A 1 17 ARG 17 -2 ? ? ? A . n A 1 18 GLY 18 -1 ? ? ? A . n A 1 19 SER 19 0 ? ? ? A . n A 1 20 MET 20 1 ? ? ? A . n A 1 21 ALA 21 2 ? ? ? A . n A 1 22 THR 22 3 ? ? ? A . n A 1 23 ALA 23 4 ? ? ? A . n A 1 24 PRO 24 5 ? ? ? A . n A 1 25 TYR 25 6 ? ? ? A . n A 1 26 ASN 26 7 ? ? ? A . n A 1 27 TYR 27 8 8 TYR TYR A . n A 1 28 SER 28 9 9 SER SER A . n A 1 29 TYR 29 10 10 TYR TYR A . n A 1 30 ILE 30 11 11 ILE ILE A . n A 1 31 PHE 31 12 12 PHE PHE A . n A 1 32 LYS 32 13 13 LYS LYS A . n A 1 33 TYR 33 14 14 TYR TYR A . n A 1 34 ILE 34 15 15 ILE ILE A . n A 1 35 ILE 35 16 16 ILE ILE A . n A 1 36 ILE 36 17 17 ILE ILE A . n A 1 37 GLY 37 18 18 GLY GLY A . n A 1 38 ASP 38 19 19 ASP ASP A . n A 1 39 MET 39 20 20 MET MET A . n A 1 40 GLY 40 21 21 GLY GLY A . n A 1 41 VAL 41 22 22 VAL VAL A . n A 1 42 GLY 42 23 23 GLY GLY A . n A 1 43 LYS 43 24 24 LYS LYS A . n A 1 44 SER 44 25 25 SER SER A . n A 1 45 CYS 45 26 26 CYS CYS A . n A 1 46 LEU 46 27 27 LEU LEU A . n A 1 47 LEU 47 28 28 LEU LEU A . n A 1 48 HIS 48 29 29 HIS HIS A . n A 1 49 GLN 49 30 30 GLN GLN A . n A 1 50 PHE 50 31 31 PHE PHE A . n A 1 51 THR 51 32 32 THR THR A . n A 1 52 GLU 52 33 33 GLU GLU A . n A 1 53 LYS 53 34 34 LYS LYS A . n A 1 54 LYS 54 35 ? ? ? A . n A 1 55 PHE 55 36 ? ? ? A . n A 1 56 MET 56 37 ? ? ? A . n A 1 57 ALA 57 38 ? ? ? A . n A 1 58 ASP 58 39 ? ? ? A . n A 1 59 CYS 59 40 ? ? ? A . n A 1 60 PRO 60 41 ? ? ? A . n A 1 61 HIS 61 42 ? ? ? A . n A 1 62 THR 62 43 43 THR THR A . n A 1 63 ILE 63 44 44 ILE ILE A . n A 1 64 GLY 64 45 45 GLY GLY A . n A 1 65 VAL 65 46 46 VAL VAL A . n A 1 66 GLU 66 47 47 GLU GLU A . n A 1 67 PHE 67 48 48 PHE PHE A . n A 1 68 GLY 68 49 49 GLY GLY A . n A 1 69 THR 69 50 50 THR THR A . n A 1 70 ARG 70 51 51 ARG ARG A . n A 1 71 ILE 71 52 52 ILE ILE A . n A 1 72 ILE 72 53 53 ILE ILE A . n A 1 73 GLU 73 54 54 GLU GLU A . n A 1 74 VAL 74 55 55 VAL VAL A . n A 1 75 SER 75 56 56 SER SER A . n A 1 76 GLY 76 57 57 GLY GLY A . n A 1 77 GLN 77 58 58 GLN GLN A . n A 1 78 LYS 78 59 59 LYS LYS A . n A 1 79 ILE 79 60 60 ILE ILE A . n A 1 80 LYS 80 61 61 LYS LYS A . n A 1 81 LEU 81 62 62 LEU LEU A . n A 1 82 GLN 82 63 63 GLN GLN A . n A 1 83 ILE 83 64 64 ILE ILE A . n A 1 84 TRP 84 65 65 TRP TRP A . n A 1 85 ASP 85 66 66 ASP ASP A . n A 1 86 THR 86 67 67 THR THR A . n A 1 87 ALA 87 68 ? ? ? A . n A 1 88 GLY 88 69 ? ? ? A . n A 1 89 GLN 89 70 ? ? ? A . n A 1 90 GLY 90 71 ? ? ? A . n A 1 91 ARG 91 72 ? ? ? A . n A 1 92 PHE 92 73 ? ? ? A . n A 1 93 ARG 93 74 ? ? ? A . n A 1 94 ALA 94 75 75 ALA ALA A . n A 1 95 VAL 95 76 76 VAL VAL A . n A 1 96 THR 96 77 77 THR THR A . n A 1 97 ARG 97 78 78 ARG ARG A . n A 1 98 SER 98 79 79 SER SER A . n A 1 99 TYR 99 80 80 TYR TYR A . n A 1 100 TYR 100 81 81 TYR TYR A . n A 1 101 ARG 101 82 82 ARG ARG A . n A 1 102 GLY 102 83 83 GLY GLY A . n A 1 103 ALA 103 84 84 ALA ALA A . n A 1 104 ALA 104 85 85 ALA ALA A . n A 1 105 GLY 105 86 86 GLY GLY A . n A 1 106 ALA 106 87 87 ALA ALA A . n A 1 107 LEU 107 88 88 LEU LEU A . n A 1 108 MET 108 89 89 MET MET A . n A 1 109 VAL 109 90 90 VAL VAL A . n A 1 110 TYR 110 91 91 TYR TYR A . n A 1 111 ASP 111 92 92 ASP ASP A . n A 1 112 ILE 112 93 93 ILE ILE A . n A 1 113 THR 113 94 94 THR THR A . n A 1 114 ARG 114 95 95 ARG ARG A . n A 1 115 ARG 115 96 96 ARG ARG A . n A 1 116 SER 116 97 97 SER SER A . n A 1 117 THR 117 98 98 THR THR A . n A 1 118 TYR 118 99 99 TYR TYR A . n A 1 119 ASN 119 100 100 ASN ASN A . n A 1 120 HIS 120 101 101 HIS HIS A . n A 1 121 LEU 121 102 102 LEU LEU A . n A 1 122 SER 122 103 103 SER SER A . n A 1 123 SER 123 104 104 SER SER A . n A 1 124 TRP 124 105 105 TRP TRP A . n A 1 125 LEU 125 106 106 LEU LEU A . n A 1 126 THR 126 107 107 THR THR A . n A 1 127 ASP 127 108 108 ASP ASP A . n A 1 128 ALA 128 109 109 ALA ALA A . n A 1 129 ARG 129 110 110 ARG ARG A . n A 1 130 ASN 130 111 111 ASN ASN A . n A 1 131 LEU 131 112 112 LEU LEU A . n A 1 132 THR 132 113 113 THR THR A . n A 1 133 ASN 133 114 114 ASN ASN A . n A 1 134 PRO 134 115 115 PRO PRO A . n A 1 135 ASN 135 116 116 ASN ASN A . n A 1 136 THR 136 117 117 THR THR A . n A 1 137 VAL 137 118 118 VAL VAL A . n A 1 138 ILE 138 119 119 ILE ILE A . n A 1 139 ILE 139 120 120 ILE ILE A . n A 1 140 LEU 140 121 121 LEU LEU A . n A 1 141 ILE 141 122 122 ILE ILE A . n A 1 142 GLY 142 123 123 GLY GLY A . n A 1 143 ASN 143 124 124 ASN ASN A . n A 1 144 LYS 144 125 125 LYS LYS A . n A 1 145 ALA 145 126 126 ALA ALA A . n A 1 146 ASP 146 127 127 ASP ASP A . n A 1 147 LEU 147 128 128 LEU LEU A . n A 1 148 GLU 148 129 129 GLU GLU A . n A 1 149 ALA 149 130 130 ALA ALA A . n A 1 150 GLN 150 131 131 GLN GLN A . n A 1 151 ARG 151 132 132 ARG ARG A . n A 1 152 ASP 152 133 133 ASP ASP A . n A 1 153 VAL 153 134 134 VAL VAL A . n A 1 154 THR 154 135 135 THR THR A . n A 1 155 TYR 155 136 136 TYR TYR A . n A 1 156 GLU 156 137 137 GLU GLU A . n A 1 157 GLU 157 138 138 GLU GLU A . n A 1 158 ALA 158 139 139 ALA ALA A . n A 1 159 LYS 159 140 140 LYS LYS A . n A 1 160 GLN 160 141 141 GLN GLN A . n A 1 161 PHE 161 142 142 PHE PHE A . n A 1 162 ALA 162 143 143 ALA ALA A . n A 1 163 GLU 163 144 144 GLU GLU A . n A 1 164 GLU 164 145 145 GLU GLU A . n A 1 165 ASN 165 146 146 ASN ASN A . n A 1 166 GLY 166 147 147 GLY GLY A . n A 1 167 LEU 167 148 148 LEU LEU A . n A 1 168 LEU 168 149 149 LEU LEU A . n A 1 169 PHE 169 150 150 PHE PHE A . n A 1 170 LEU 170 151 151 LEU LEU A . n A 1 171 GLU 171 152 152 GLU GLU A . n A 1 172 ALA 172 153 153 ALA ALA A . n A 1 173 SER 173 154 154 SER SER A . n A 1 174 ALA 174 155 155 ALA ALA A . n A 1 175 LYS 175 156 156 LYS LYS A . n A 1 176 THR 176 157 157 THR THR A . n A 1 177 GLY 177 158 158 GLY GLY A . n A 1 178 GLU 178 159 159 GLU GLU A . n A 1 179 ASN 179 160 160 ASN ASN A . n A 1 180 VAL 180 161 161 VAL VAL A . n A 1 181 GLU 181 162 162 GLU GLU A . n A 1 182 ASP 182 163 163 ASP ASP A . n A 1 183 ALA 183 164 164 ALA ALA A . n A 1 184 PHE 184 165 165 PHE PHE A . n A 1 185 LEU 185 166 166 LEU LEU A . n A 1 186 GLU 186 167 167 GLU GLU A . n A 1 187 ALA 187 168 168 ALA ALA A . n A 1 188 ALA 188 169 169 ALA ALA A . n A 1 189 LYS 189 170 170 LYS LYS A . n A 1 190 LYS 190 171 171 LYS LYS A . n A 1 191 ILE 191 172 172 ILE ILE A . n A 1 192 TYR 192 173 173 TYR TYR A . n A 1 193 GLN 193 174 174 GLN GLN A . n A 1 194 ASN 194 175 175 ASN ASN A . n A 1 195 ILE 195 176 ? ? ? A . n A 1 196 GLN 196 177 ? ? ? A . n A 1 197 ASP 197 178 ? ? ? A . n A 1 198 GLY 198 179 ? ? ? A . n A 1 199 SER 199 180 ? ? ? A . n A 1 200 LEU 200 181 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Structural Genomics Consortium' _pdbx_SG_project.initial_of_center SGC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG 1 201 502 MG MG A . C 3 GDP 1 202 501 GDP GDP A . D 4 UNX 1 203 301 UNX UNX A . E 4 UNX 1 204 302 UNX UNX A . F 5 HOH 1 301 201 HOH HOH A . F 5 HOH 2 302 202 HOH HOH A . F 5 HOH 3 303 203 HOH HOH A . F 5 HOH 4 304 204 HOH HOH A . F 5 HOH 5 305 205 HOH HOH A . F 5 HOH 6 306 206 HOH HOH A . F 5 HOH 7 307 207 HOH HOH A . F 5 HOH 8 308 208 HOH HOH A . F 5 HOH 9 309 209 HOH HOH A . F 5 HOH 10 310 210 HOH HOH A . F 5 HOH 11 311 211 HOH HOH A . F 5 HOH 12 312 212 HOH HOH A . F 5 HOH 13 313 213 HOH HOH A . F 5 HOH 14 314 214 HOH HOH A . F 5 HOH 15 315 215 HOH HOH A . F 5 HOH 16 316 216 HOH HOH A . F 5 HOH 17 317 217 HOH HOH A . F 5 HOH 18 318 218 HOH HOH A . F 5 HOH 19 319 219 HOH HOH A . F 5 HOH 20 320 220 HOH HOH A . F 5 HOH 21 321 221 HOH HOH A . F 5 HOH 22 322 222 HOH HOH A . F 5 HOH 23 323 223 HOH HOH A . F 5 HOH 24 324 224 HOH HOH A . F 5 HOH 25 325 225 HOH HOH A . F 5 HOH 26 326 226 HOH HOH A . F 5 HOH 27 327 227 HOH HOH A . F 5 HOH 28 328 228 HOH HOH A . F 5 HOH 29 329 229 HOH HOH A . F 5 HOH 30 330 230 HOH HOH A . F 5 HOH 31 331 231 HOH HOH A . F 5 HOH 32 332 232 HOH HOH A . F 5 HOH 33 333 233 HOH HOH A . F 5 HOH 34 334 234 HOH HOH A . F 5 HOH 35 335 235 HOH HOH A . F 5 HOH 36 336 236 HOH HOH A . F 5 HOH 37 337 237 HOH HOH A . F 5 HOH 38 338 238 HOH HOH A . F 5 HOH 39 339 239 HOH HOH A . F 5 HOH 40 340 240 HOH HOH A . F 5 HOH 41 341 241 HOH HOH A . F 5 HOH 42 342 242 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O1B ? C GDP . ? A GDP 202 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 OD2 ? A ASP 85 ? A ASP 66 ? 1_555 99.9 ? 2 O1B ? C GDP . ? A GDP 202 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O ? F HOH . ? A HOH 338 ? 1_555 159.8 ? 3 OD2 ? A ASP 85 ? A ASP 66 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O ? F HOH . ? A HOH 338 ? 1_555 95.2 ? 4 O1B ? C GDP . ? A GDP 202 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 OG ? A SER 44 ? A SER 25 ? 1_555 91.8 ? 5 OD2 ? A ASP 85 ? A ASP 66 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 OG ? A SER 44 ? A SER 25 ? 1_555 81.2 ? 6 O ? F HOH . ? A HOH 338 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 OG ? A SER 44 ? A SER 25 ? 1_555 77.3 ? 7 O1B ? C GDP . ? A GDP 202 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O ? F HOH . ? A HOH 322 ? 1_555 84.8 ? 8 OD2 ? A ASP 85 ? A ASP 66 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O ? F HOH . ? A HOH 322 ? 1_555 149.1 ? 9 O ? F HOH . ? A HOH 338 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O ? F HOH . ? A HOH 322 ? 1_555 75.4 ? 10 OG ? A SER 44 ? A SER 25 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O ? F HOH . ? A HOH 322 ? 1_555 68.0 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-08-02 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2012-02-29 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description 1 1 'Structure model' repository 'Initial release' ? 2 4 'Structure model' repository Obsolete ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Version format compliance' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 10.6120 _pdbx_refine_tls.origin_y -0.3420 _pdbx_refine_tls.origin_z 7.8080 _pdbx_refine_tls.T[1][1] -0.0551 _pdbx_refine_tls.T[2][2] -0.0144 _pdbx_refine_tls.T[3][3] -0.1070 _pdbx_refine_tls.T[1][2] -0.0088 _pdbx_refine_tls.T[1][3] -0.0049 _pdbx_refine_tls.T[2][3] 0.0000 _pdbx_refine_tls.L[1][1] 4.1099 _pdbx_refine_tls.L[2][2] 0.9287 _pdbx_refine_tls.L[3][3] 1.0146 _pdbx_refine_tls.L[1][2] -0.1626 _pdbx_refine_tls.L[1][3] -0.1516 _pdbx_refine_tls.L[2][3] -0.1773 _pdbx_refine_tls.S[1][1] 0.0665 _pdbx_refine_tls.S[1][2] -0.3617 _pdbx_refine_tls.S[1][3] -0.0891 _pdbx_refine_tls.S[2][1] 0.0334 _pdbx_refine_tls.S[2][2] -0.0451 _pdbx_refine_tls.S[2][3] -0.1424 _pdbx_refine_tls.S[3][1] 0.0669 _pdbx_refine_tls.S[3][2] 0.0802 _pdbx_refine_tls.S[3][3] -0.0214 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 8 _pdbx_refine_tls_group.beg_label_asym_id A _pdbx_refine_tls_group.beg_label_seq_id 8 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 175 _pdbx_refine_tls_group.end_label_asym_id A _pdbx_refine_tls_group.end_label_seq_id 175 _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.selection_details ? # _phasing.method mr # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal HKL . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data processing' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 MOLREP . ? program 'A. Vagin' alexei@ysbl.york.ac.uk 'molecular replacement' http://www.ccp4.ac.uk/dist/html/molrep.html Fortran ? 2 REFMAC5 refmac_5.2.0005 24/04/2001 program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran ? 3 PDB_EXTRACT 1.700 'Jul. 11, 2005' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 4 HKL . ? ? ? ? 'data scaling' ? ? ? 5 MOLREP . ? ? ? ? phasing ? ? ? 6 REFMAC 5.2.0005 ? ? ? ? refinement ? ? ? 7 # _pdbx_database_remark.id 42 _pdbx_database_remark.text ;MOLPROBITY STRUCTURE VALIDATION PROGRAMS : MOLPROBITY (KING, REDUCE, AND PROBE) AUTHORS : I.W.DAVIS,J.M.WORD URL : HTTP://KINEMAGE.BIOCHEM.DUKE.EDU/MOLPROBITY/ AUTHORS : J.S.RICHARDSON,W.B.ARENDALL,D.C.RICHARDSON REFERENCE : NEW TOOLS AND DATA FOR IMPROVING : STRUCTURES, USING ALL-ATOM CONTACTS : METHODS IN ENZYMOLOGY. 2003;374:385-412. MOLPROBITY OUTPUT SCORES: ALL-ATOM CLASHSCORE : 3.81 (3.67 B<40) BAD ROTAMERS : 4.3% 5/117 (TARGET 0-1%) RAMACHANDRAN OUTLIERS : 0.0% 0/147 (TARGET 0.2%) RAMACHANDRAN FAVORED : 99.3% 146/147 (TARGET 98.0%) ; # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CB _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 CYS _pdbx_validate_rmsd_bond.auth_seq_id_1 26 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 SG _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 CYS _pdbx_validate_rmsd_bond.auth_seq_id_2 26 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.713 _pdbx_validate_rmsd_bond.bond_target_value 1.812 _pdbx_validate_rmsd_bond.bond_deviation -0.099 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.016 _pdbx_validate_rmsd_bond.linker_flag N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id THR _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 113 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -111.59 _pdbx_validate_torsion.psi -138.26 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 34 ? CB ? A LYS 53 CB 2 1 Y 1 A LYS 34 ? CG ? A LYS 53 CG 3 1 Y 1 A LYS 34 ? CD ? A LYS 53 CD 4 1 Y 1 A LYS 34 ? CE ? A LYS 53 CE 5 1 Y 1 A LYS 34 ? NZ ? A LYS 53 NZ 6 1 Y 1 A VAL 55 ? CG1 ? A VAL 74 CG1 7 1 Y 1 A VAL 55 ? CG2 ? A VAL 74 CG2 8 1 Y 1 A LYS 61 ? NZ ? A LYS 80 NZ 9 1 Y 1 A ARG 78 ? CB ? A ARG 97 CB 10 1 Y 1 A ARG 78 ? CG ? A ARG 97 CG 11 1 Y 1 A ARG 78 ? CD ? A ARG 97 CD 12 1 Y 1 A ARG 78 ? NE ? A ARG 97 NE 13 1 Y 1 A ARG 78 ? CZ ? A ARG 97 CZ 14 1 Y 1 A ARG 78 ? NH1 ? A ARG 97 NH1 15 1 Y 1 A ARG 78 ? NH2 ? A ARG 97 NH2 16 1 Y 1 A ILE 93 ? CD1 ? A ILE 112 CD1 17 1 Y 1 A LYS 140 ? CE ? A LYS 159 CE 18 1 Y 1 A LYS 140 ? NZ ? A LYS 159 NZ 19 1 Y 1 A GLN 141 ? CD ? A GLN 160 CD 20 1 Y 1 A GLN 141 ? OE1 ? A GLN 160 OE1 21 1 Y 1 A GLN 141 ? NE2 ? A GLN 160 NE2 22 1 Y 1 A LYS 156 ? CE ? A LYS 175 CE 23 1 Y 1 A LYS 156 ? NZ ? A LYS 175 NZ 24 1 Y 1 A GLU 159 ? CG ? A GLU 178 CG 25 1 Y 1 A GLU 159 ? CD ? A GLU 178 CD 26 1 Y 1 A GLU 159 ? OE1 ? A GLU 178 OE1 27 1 Y 1 A GLU 159 ? OE2 ? A GLU 178 OE2 28 1 Y 1 A LYS 170 ? CE ? A LYS 189 CE 29 1 Y 1 A LYS 170 ? NZ ? A LYS 189 NZ 30 1 Y 1 A LYS 171 ? CD ? A LYS 190 CD 31 1 Y 1 A LYS 171 ? CE ? A LYS 190 CE 32 1 Y 1 A LYS 171 ? NZ ? A LYS 190 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -18 ? A MET 1 2 1 Y 1 A GLY -17 ? A GLY 2 3 1 Y 1 A SER -16 ? A SER 3 4 1 Y 1 A SER -15 ? A SER 4 5 1 Y 1 A HIS -14 ? A HIS 5 6 1 Y 1 A HIS -13 ? A HIS 6 7 1 Y 1 A HIS -12 ? A HIS 7 8 1 Y 1 A HIS -11 ? A HIS 8 9 1 Y 1 A HIS -10 ? A HIS 9 10 1 Y 1 A HIS -9 ? A HIS 10 11 1 Y 1 A SER -8 ? A SER 11 12 1 Y 1 A SER -7 ? A SER 12 13 1 Y 1 A GLY -6 ? A GLY 13 14 1 Y 1 A LEU -5 ? A LEU 14 15 1 Y 1 A VAL -4 ? A VAL 15 16 1 Y 1 A PRO -3 ? A PRO 16 17 1 Y 1 A ARG -2 ? A ARG 17 18 1 Y 1 A GLY -1 ? A GLY 18 19 1 Y 1 A SER 0 ? A SER 19 20 1 Y 1 A MET 1 ? A MET 20 21 1 Y 1 A ALA 2 ? A ALA 21 22 1 Y 1 A THR 3 ? A THR 22 23 1 Y 1 A ALA 4 ? A ALA 23 24 1 Y 1 A PRO 5 ? A PRO 24 25 1 Y 1 A TYR 6 ? A TYR 25 26 1 Y 1 A ASN 7 ? A ASN 26 27 1 Y 1 A LYS 35 ? A LYS 54 28 1 Y 1 A PHE 36 ? A PHE 55 29 1 Y 1 A MET 37 ? A MET 56 30 1 Y 1 A ALA 38 ? A ALA 57 31 1 Y 1 A ASP 39 ? A ASP 58 32 1 Y 1 A CYS 40 ? A CYS 59 33 1 Y 1 A PRO 41 ? A PRO 60 34 1 Y 1 A HIS 42 ? A HIS 61 35 1 Y 1 A ALA 68 ? A ALA 87 36 1 Y 1 A GLY 69 ? A GLY 88 37 1 Y 1 A GLN 70 ? A GLN 89 38 1 Y 1 A GLY 71 ? A GLY 90 39 1 Y 1 A ARG 72 ? A ARG 91 40 1 Y 1 A PHE 73 ? A PHE 92 41 1 Y 1 A ARG 74 ? A ARG 93 42 1 Y 1 A ILE 176 ? A ILE 195 43 1 Y 1 A GLN 177 ? A GLN 196 44 1 Y 1 A ASP 178 ? A ASP 197 45 1 Y 1 A GLY 179 ? A GLY 198 46 1 Y 1 A SER 180 ? A SER 199 47 1 Y 1 A LEU 181 ? A LEU 200 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 "GUANOSINE-5'-DIPHOSPHATE" GDP 4 'UNKNOWN ATOM OR ION' UNX 5 water HOH #