HEADER UNKNOWN FUNCTION 24-JUL-05 2AEV TITLE MJ0158, NABH4-REDUCED FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN MJ0158; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHANOCALDOCOCCUS JANNASCHII; SOURCE 3 ORGANISM_TAXID: 2190; SOURCE 4 GENE: MJ0158; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)-RIL; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PT7-7 KEYWDS SELENOCYSTEINE SYNTHASE, PLP, PYRIDOXAL PHOSPHATE, HOMO- KEYWDS 2 OLIGOMERIZATION, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR J.T.KAISER,K.GROMADSKI,M.ROTHER,H.ENGELHARDT,M.V.RODNINA,M.C.WAHL REVDAT 6 15-NOV-23 2AEV 1 REMARK REVDAT 5 25-OCT-23 2AEV 1 REMARK SEQADV LINK REVDAT 4 13-JUL-11 2AEV 1 VERSN REVDAT 3 24-FEB-09 2AEV 1 VERSN REVDAT 2 24-JAN-06 2AEV 1 JRNL REVDAT 1 04-OCT-05 2AEV 0 JRNL AUTH J.T.KAISER,K.GROMADSKI,M.ROTHER,H.ENGELHARDT,M.V.RODNINA, JRNL AUTH 2 M.C.WAHL JRNL TITL STRUCTURAL AND FUNCTIONAL INVESTIGATION OF A PUTATIVE JRNL TITL 2 ARCHAEAL SELENOCYSTEINE SYNTHASE JRNL REF BIOCHEMISTRY V. 44 13315 2005 JRNL REFN ISSN 0006-2960 JRNL PMID 16201757 JRNL DOI 10.1021/BI051110R REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 18.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.7 REMARK 3 NUMBER OF REFLECTIONS : 20860 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.225 REMARK 3 R VALUE (WORKING SET) : 0.222 REMARK 3 FREE R VALUE : 0.271 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1128 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1620 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.91 REMARK 3 BIN R VALUE (WORKING SET) : 0.2430 REMARK 3 BIN FREE R VALUE SET COUNT : 102 REMARK 3 BIN FREE R VALUE : 0.2940 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2894 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 45 REMARK 3 SOLVENT ATOMS : 180 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.78 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.06000 REMARK 3 B22 (A**2) : 0.95000 REMARK 3 B33 (A**2) : -0.90000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.287 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.221 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.162 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.396 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.936 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.912 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2992 ; 0.008 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4033 ; 1.174 ; 2.018 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 369 ; 5.686 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 120 ;35.294 ;24.667 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 587 ;16.520 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 17 ;12.855 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 460 ; 0.076 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2130 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1520 ; 0.193 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2073 ; 0.300 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 196 ; 0.132 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 101 ; 0.193 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 17 ; 0.119 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1886 ; 2.292 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2953 ; 3.141 ; 4.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1225 ; 2.567 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1080 ; 3.537 ; 4.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 9 A 36 REMARK 3 RESIDUE RANGE : A 271 A 374 REMARK 3 ORIGIN FOR THE GROUP (A): -23.5070 19.3210 -10.0130 REMARK 3 T TENSOR REMARK 3 T11: -0.0558 T22: -0.0316 REMARK 3 T33: -0.0102 T12: 0.0608 REMARK 3 T13: -0.0339 T23: 0.0641 REMARK 3 L TENSOR REMARK 3 L11: 7.2475 L22: 4.6970 REMARK 3 L33: 2.5705 L12: 3.3091 REMARK 3 L13: 2.4837 L23: 2.1830 REMARK 3 S TENSOR REMARK 3 S11: -0.2242 S12: -0.3046 S13: 0.5011 REMARK 3 S21: -0.4153 S22: -0.2349 S23: 0.5738 REMARK 3 S31: -0.2803 S32: -0.3173 S33: 0.4591 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 37 A 254 REMARK 3 ORIGIN FOR THE GROUP (A): 5.0160 22.4900 -30.7410 REMARK 3 T TENSOR REMARK 3 T11: -0.2297 T22: -0.1768 REMARK 3 T33: -0.1191 T12: 0.0136 REMARK 3 T13: -0.0095 T23: -0.0082 REMARK 3 L TENSOR REMARK 3 L11: 1.3123 L22: 2.7437 REMARK 3 L33: 2.0958 L12: 0.0665 REMARK 3 L13: 0.2349 L23: 0.3906 REMARK 3 S TENSOR REMARK 3 S11: 0.0066 S12: -0.0557 S13: -0.1989 REMARK 3 S21: 0.2354 S22: 0.0055 S23: 0.0192 REMARK 3 S31: 0.0522 S32: -0.0210 S33: -0.0121 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 255 A 270 REMARK 3 ORIGIN FOR THE GROUP (A): -5.4500 8.5460 -11.6900 REMARK 3 T TENSOR REMARK 3 T11: -0.0407 T22: -0.1280 REMARK 3 T33: 0.0693 T12: 0.0463 REMARK 3 T13: 0.0420 T23: 0.1122 REMARK 3 L TENSOR REMARK 3 L11: 30.4928 L22: 3.2310 REMARK 3 L33: 5.2151 L12: 3.2907 REMARK 3 L13: -8.1621 L23: -2.5648 REMARK 3 S TENSOR REMARK 3 S11: -0.5637 S12: -0.5183 S13: -1.5949 REMARK 3 S21: 0.1174 S22: -0.0141 S23: -0.4414 REMARK 3 S31: 0.4968 S32: 0.1421 S33: 0.5778 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2AEV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-JUL-05. REMARK 100 THE DEPOSITION ID IS D_1000033810. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-APR-01; 05-APR-01 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 2.2 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : MPG/DESY, HAMBURG; MPG/DESY, REMARK 200 HAMBURG REMARK 200 BEAMLINE : BW6; BW6 REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9796, 0.9808, 0.95; 0.9167, REMARK 200 0.9183, 0.90 REMARK 200 MONOCHROMATOR : MIRRORS; MIRRORS REMARK 200 OPTICS : MIRRORS; MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH; MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24290 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 18.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.5 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 86.4 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD; MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ID 2AEU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG400, AMMONIUM SULFATE, PH 2.2, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 28.99900 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.36800 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.99900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.36800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A DIMER. THE SECOND PART OF THE REMARK 300 DIMER IS CREATED BY THE TWO FOLD AXIS ALONG Z, LOCATED AT 1/2Y, REMARK 300 I.E. ROTATION OF (-X, -Y, Z) AND TRANSLATION OF (0, 1, 0) REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 8100 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30850 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -236.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 72.73600 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1083 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LEU A 2 REMARK 465 SER A 3 REMARK 465 ASP A 4 REMARK 465 TYR A 5 REMARK 465 GLU A 6 REMARK 465 GLU A 7 REMARK 465 PHE A 8 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 10 116.14 68.44 REMARK 500 LEU A 11 103.89 49.02 REMARK 500 ASP A 179 37.89 -99.56 REMARK 500 GLU A 211 42.86 -106.78 REMARK 500 ASP A 285 119.14 -163.14 REMARK 500 ASN A 289 89.21 -152.43 REMARK 500 MET A 336 173.96 63.27 REMARK 500 PRO A 337 -152.42 -77.15 REMARK 500 SER A 340 -92.24 62.27 REMARK 500 LYS A 341 -43.18 84.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LEU A 108 PRO A 109 133.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1006 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1007 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1008 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1009 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1010 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2AEV RELATED DB: PDB REMARK 900 APO FORM DBREF 2AEV A 1 374 UNP Q57622 Y158_METJA 1 374 SEQADV 2AEV LLP A 208 UNP Q57622 LYS 208 MODIFIED RESIDUE SEQRES 1 A 374 MET LEU SER ASP TYR GLU GLU PHE LEU ARG LEU GLU LYS SEQRES 2 A 374 ALA ARG LYS ILE ILE LEU GLU ILE LEU ASN GLU LYS GLY SEQRES 3 A 374 ARG ASP ALA LEU TYR ASP LEU SER GLY LEU SER GLY GLY SEQRES 4 A 374 PHE LEU ILE ASP GLU LYS ASP LYS ALA LEU LEU ASN THR SEQRES 5 A 374 TYR ILE GLY SER SER TYR PHE ALA GLU LYS VAL ASN GLU SEQRES 6 A 374 TYR GLY LEU LYS HIS LEU GLY GLY ASP GLU ASN ASP LYS SEQRES 7 A 374 CYS VAL GLY PHE ASN ARG THR SER SER ALA ILE LEU ALA SEQRES 8 A 374 THR ILE LEU ALA LEU LYS PRO LYS LYS VAL ILE HIS TYR SEQRES 9 A 374 LEU PRO GLU LEU PRO GLY HIS PRO SER ILE GLU ARG SER SEQRES 10 A 374 CYS LYS ILE VAL ASN ALA LYS TYR PHE GLU SER ASP LYS SEQRES 11 A 374 VAL GLY GLU ILE LEU ASN LYS ILE ASP LYS ASP THR LEU SEQRES 12 A 374 VAL ILE ILE THR GLY SER THR MET ASP LEU LYS VAL ILE SEQRES 13 A 374 GLU LEU GLU ASN PHE LYS LYS VAL ILE ASN THR ALA LYS SEQRES 14 A 374 ASN LYS GLU ALA ILE VAL PHE VAL ASP ASP ALA SER GLY SEQRES 15 A 374 ALA ARG VAL ARG LEU LEU PHE ASN GLN PRO PRO ALA LEU SEQRES 16 A 374 LYS LEU GLY ALA ASP LEU VAL VAL THR SER THR ASP LLP SEQRES 17 A 374 LEU MET GLU GLY PRO ARG GLY GLY LEU LEU ALA GLY LYS SEQRES 18 A 374 LYS GLU LEU VAL ASP LYS ILE TYR ILE GLU GLY THR LYS SEQRES 19 A 374 PHE GLY LEU GLU ALA GLN PRO PRO LEU LEU ALA GLY ILE SEQRES 20 A 374 TYR ARG ALA LEU LYS ASN PHE ASN LEU GLU ARG ILE ARG SEQRES 21 A 374 LYS ALA PHE GLU ARG ALA LYS ASN PHE ASP LEU SER LYS SEQRES 22 A 374 ILE GLU LYS LEU ASN LYS GLU LEU LYS ALA ILE ASP ASP SEQRES 23 A 374 ASN ILE ASN ILE VAL TYR GLU ARG THR PRO THR GLY PHE SEQRES 24 A 374 VAL ILE LYS ARG VAL TYR LYS ASP ASP THR ILE ASN ILE SEQRES 25 A 374 LYS LYS LEU ILE GLU ILE GLY PHE ASN LEU LEU LYS ASN SEQRES 26 A 374 TYR GLY ILE ILE THR ILE THR VAL ALA GLY MET PRO GLY SEQRES 27 A 374 ALA SER LYS SER LEU ARG ILE ASP LEU THR SER ARG ASP SEQRES 28 A 374 ALA GLU ARG ILE ASP ASP ASN TYR ILE ILE LYS ALA ILE SEQRES 29 A 374 VAL GLU SER ILE LYS MET ALA PHE LYS SER MODRES 2AEV LLP A 208 LYS HET LLP A 208 24 HET SO4 A1002 5 HET SO4 A1003 5 HET SO4 A1004 5 HET SO4 A1005 5 HET SO4 A1006 5 HET SO4 A1007 5 HET SO4 A1008 5 HET SO4 A1009 5 HET SO4 A1010 5 HETNAM LLP (2S)-2-AMINO-6-[[3-HYDROXY-2-METHYL-5- HETNAM 2 LLP (PHOSPHONOOXYMETHYL)PYRIDIN-4- HETNAM 3 LLP YL]METHYLIDENEAMINO]HEXANOIC ACID HETNAM SO4 SULFATE ION HETSYN LLP N'-PYRIDOXYL-LYSINE-5'-MONOPHOSPHATE FORMUL 1 LLP C14 H22 N3 O7 P FORMUL 2 SO4 9(O4 S 2-) FORMUL 11 HOH *180(H2 O) HELIX 1 1 GLU A 12 LYS A 25 1 14 HELIX 2 2 GLY A 26 LEU A 30 5 5 HELIX 3 3 ASP A 43 LEU A 50 1 8 HELIX 4 4 ASN A 51 TYR A 53 5 3 HELIX 5 5 ILE A 54 GLY A 72 1 19 HELIX 6 6 ARG A 84 LYS A 97 1 14 HELIX 7 7 PRO A 112 VAL A 121 1 10 HELIX 8 8 LYS A 130 ASN A 136 1 7 HELIX 9 9 GLU A 157 GLU A 172 1 16 HELIX 10 10 SER A 181 PHE A 189 1 9 HELIX 11 11 LYS A 222 LYS A 234 1 13 HELIX 12 12 GLN A 240 PHE A 254 1 15 HELIX 13 13 ASN A 255 PHE A 269 1 15 HELIX 14 14 LEU A 271 LYS A 282 1 12 HELIX 15 15 ASP A 307 GLY A 327 1 21 HELIX 16 16 THR A 330 ALA A 334 5 5 HELIX 17 17 SER A 349 ILE A 355 5 7 HELIX 18 18 ASP A 356 PHE A 372 1 17 SHEET 1 A 2 TYR A 31 ASP A 32 0 SHEET 2 A 2 ILE A 328 ILE A 329 1 O ILE A 329 N TYR A 31 SHEET 1 B 7 ASP A 77 PHE A 82 0 SHEET 2 B 7 GLY A 216 LYS A 221 -1 O LEU A 218 N VAL A 80 SHEET 3 B 7 LEU A 201 SER A 205 -1 N VAL A 202 O ALA A 219 SHEET 4 B 7 VAL A 175 ASP A 178 1 N VAL A 177 O LEU A 201 SHEET 5 B 7 THR A 142 THR A 147 1 N VAL A 144 O PHE A 176 SHEET 6 B 7 LYS A 100 TYR A 104 1 N ILE A 102 O ILE A 145 SHEET 7 B 7 LYS A 124 SER A 128 1 O PHE A 126 N HIS A 103 SHEET 1 C 3 ILE A 288 ARG A 294 0 SHEET 2 C 3 GLY A 298 TYR A 305 -1 O VAL A 300 N GLU A 293 SHEET 3 C 3 LEU A 343 ASP A 346 -1 O LEU A 343 N ILE A 301 LINK C ASP A 207 N LLP A 208 1555 1555 1.33 LINK C LLP A 208 N LEU A 209 1555 1555 1.33 SITE 1 AC1 8 HIS A 111 PRO A 112 SER A 113 LLP A 208 SITE 2 AC1 8 HOH A1018 HOH A1030 HOH A1077 HOH A1127 SITE 1 AC2 6 HIS A 111 THR A 150 MET A 151 LLP A 208 SITE 2 AC2 6 HOH A1072 HOH A1105 SITE 1 AC3 5 ARG A 116 LYS A 119 ASN A 166 LYS A 169 SITE 2 AC3 5 LYS A 234 SITE 1 AC4 1 ARG A 294 SITE 1 AC5 5 LYS A 130 VAL A 131 ASN A 160 LYS A 163 SITE 2 AC5 5 HOH A1140 SITE 1 AC6 2 LYS A 124 ARG A 303 SITE 1 AC7 4 ASP A 139 LYS A 140 LYS A 171 HOH A1037 SITE 1 AC8 6 THR A 295 PRO A 296 ARG A 344 HOH A1090 SITE 2 AC8 6 HOH A1144 HOH A1166 SITE 1 AC9 6 ARG A 27 GLU A 280 ARG A 350 ARG A 354 SITE 2 AC9 6 LYS A 369 HOH A1135 CRYST1 57.998 72.736 82.625 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017242 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013748 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012103 0.00000