HEADER ISOMERASE 26-JUL-05 2AFV TITLE THE CRYSTAL STRUCTURE OF PUTATIVE PRECORRIN ISOMERASE CBIC IN TITLE 2 COBALAMIN BIOSYNTHESIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: COBALAMIN BIOSYNTHESIS PRECORRIN ISOMERASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 5.4.1.2; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LEPTOSPIRA INTERROGANS; SOURCE 3 ORGANISM_TAXID: 173; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.XUE,Z.WEI REVDAT 3 13-MAR-24 2AFV 1 REMARK SEQADV HETSYN REVDAT 2 24-FEB-09 2AFV 1 VERSN REVDAT 1 04-APR-06 2AFV 0 JRNL AUTH Y.XUE,Z.WEI,X.LI,W.GONG JRNL TITL THE CRYSTAL STRUCTURE OF PUTATIVE PRECORRIN ISOMERASE CBIC JRNL TITL 2 IN COBALAMIN BIOSYNTHESIS JRNL REF J.STRUCT.BIOL. V. 153 307 2006 JRNL REFN ISSN 1047-8477 JRNL PMID 16427313 JRNL DOI 10.1016/J.JSB.2005.11.011 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.87 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 186888.800 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 97.5 REMARK 3 NUMBER OF REFLECTIONS : 14959 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1520 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.006 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.19 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.80 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2105 REMARK 3 BIN R VALUE (WORKING SET) : 0.3020 REMARK 3 BIN FREE R VALUE : 0.3810 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 9.70 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 227 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.025 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3284 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 49 REMARK 3 SOLVENT ATOMS : 63 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 42.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 5.23000 REMARK 3 B22 (A**2) : 5.23000 REMARK 3 B33 (A**2) : -10.47000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.33 REMARK 3 ESD FROM SIGMAA (A) : 0.47 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.42 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.59 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.200 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 20.90 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.790 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.34 REMARK 3 BSOL : 23.06 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2AFV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 28-JUL-05. REMARK 100 THE DEPOSITION ID IS D_1000033842. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-JUL-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15306 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 19.870 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.53 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG6000, SODIUM CHLORIDE, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 42 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 56.53900 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 56.53900 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 57.25100 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 56.53900 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 56.53900 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 57.25100 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 56.53900 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 56.53900 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 57.25100 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 56.53900 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 56.53900 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 57.25100 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18810 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -120.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9110 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 36970 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -256.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 113.07800 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASN A 2 REMARK 465 ASP A 3 REMARK 465 GLY A 221 REMARK 465 GLU A 222 REMARK 465 ARG A 223 REMARK 465 LEU A 224 REMARK 465 GLU A 225 REMARK 465 HIS A 226 REMARK 465 HIS A 227 REMARK 465 HIS A 228 REMARK 465 HIS A 229 REMARK 465 HIS A 230 REMARK 465 HIS A 231 REMARK 465 MET B 1 REMARK 465 ASN B 2 REMARK 465 ASP B 3 REMARK 465 GLY B 221 REMARK 465 GLU B 222 REMARK 465 ARG B 223 REMARK 465 LEU B 224 REMARK 465 GLU B 225 REMARK 465 HIS B 226 REMARK 465 HIS B 227 REMARK 465 HIS B 228 REMARK 465 HIS B 229 REMARK 465 HIS B 230 REMARK 465 HIS B 231 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 9 CG OD1 ND2 REMARK 470 LYS A 17 CG CD CE NZ REMARK 470 GLU A 24 CG CD OE1 OE2 REMARK 470 GLU A 89 CG CD OE1 OE2 REMARK 470 LYS A 92 CG CD CE NZ REMARK 470 LYS A 97 CG CD CE NZ REMARK 470 SER A 103 OG REMARK 470 GLU A 105 CG CD OE1 OE2 REMARK 470 ILE A 108 CG1 CG2 CD1 REMARK 470 GLU A 109 CG CD OE1 OE2 REMARK 470 LYS A 112 CG CD CE NZ REMARK 470 ARG A 118 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 130 CG OD1 ND2 REMARK 470 SER A 218 OG REMARK 470 ARG A 220 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 12 CG CD NE CZ NH1 NH2 REMARK 470 ASN B 13 CG OD1 ND2 REMARK 470 GLN B 33 CG CD OE1 NE2 REMARK 470 ASN B 87 CG OD1 ND2 REMARK 470 GLU B 89 CG CD OE1 OE2 REMARK 470 LYS B 92 CG CD CE NZ REMARK 470 SER B 103 OG REMARK 470 LYS B 112 CG CD CE NZ REMARK 470 THR B 189 OG1 CG2 REMARK 470 SER B 217 OG REMARK 470 SER B 218 OG REMARK 470 LYS B 219 CG CD CE NZ REMARK 470 ARG B 220 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 8 152.71 -44.82 REMARK 500 SER A 30 33.09 -99.98 REMARK 500 SER A 84 40.11 -70.64 REMARK 500 CYS A 100 89.39 -173.52 REMARK 500 ASP A 104 154.07 -46.78 REMARK 500 SER A 116 -134.51 -117.88 REMARK 500 SER A 128 41.23 -74.56 REMARK 500 PHE A 129 -0.15 -155.07 REMARK 500 GLU A 134 23.14 38.05 REMARK 500 ASN A 141 -38.93 -148.35 REMARK 500 ILE A 158 135.69 -38.29 REMARK 500 ARG B 5 132.60 175.02 REMARK 500 THR B 8 155.42 -46.87 REMARK 500 ALA B 47 19.30 57.78 REMARK 500 SER B 84 5.36 -56.44 REMARK 500 CYS B 100 93.58 -171.04 REMARK 500 SER B 116 -151.88 -106.97 REMARK 500 ASN B 141 -38.73 -143.53 REMARK 500 GLN B 155 -73.49 -60.28 REMARK 500 ILE B 158 118.61 -11.71 REMARK 500 LYS B 219 44.92 -77.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 1006 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1007 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 1008 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE P6G A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE P33 B 1301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2AFR RELATED DB: PDB REMARK 900 THE SAME PROTEIN OF DIFFERENT CRYSTAL FORMS DBREF 2AFV A 1 223 UNP Q8EXP7 Q8EXP7_LEPIN 1 223 DBREF 2AFV B 1 223 UNP Q8EXP7 Q8EXP7_LEPIN 1 223 SEQADV 2AFV LEU A 224 UNP Q8EXP7 EXPRESSION TAG SEQADV 2AFV GLU A 225 UNP Q8EXP7 EXPRESSION TAG SEQADV 2AFV HIS A 226 UNP Q8EXP7 EXPRESSION TAG SEQADV 2AFV HIS A 227 UNP Q8EXP7 EXPRESSION TAG SEQADV 2AFV HIS A 228 UNP Q8EXP7 EXPRESSION TAG SEQADV 2AFV HIS A 229 UNP Q8EXP7 EXPRESSION TAG SEQADV 2AFV HIS A 230 UNP Q8EXP7 EXPRESSION TAG SEQADV 2AFV HIS A 231 UNP Q8EXP7 EXPRESSION TAG SEQADV 2AFV LEU B 224 UNP Q8EXP7 EXPRESSION TAG SEQADV 2AFV GLU B 225 UNP Q8EXP7 EXPRESSION TAG SEQADV 2AFV HIS B 226 UNP Q8EXP7 EXPRESSION TAG SEQADV 2AFV HIS B 227 UNP Q8EXP7 EXPRESSION TAG SEQADV 2AFV HIS B 228 UNP Q8EXP7 EXPRESSION TAG SEQADV 2AFV HIS B 229 UNP Q8EXP7 EXPRESSION TAG SEQADV 2AFV HIS B 230 UNP Q8EXP7 EXPRESSION TAG SEQADV 2AFV HIS B 231 UNP Q8EXP7 EXPRESSION TAG SEQRES 1 A 231 MET ASN ASP MET ARG GLN ILE THR ASN LEU GLY ARG ASN SEQRES 2 A 231 ILE GLU ASN LYS SER PHE SER ILE ILE ASP GLU GLU ALA SEQRES 3 A 231 GLY PRO HIS SER PHE ALA GLN GLU GLU TRP GLU VAL VAL SEQRES 4 A 231 ARG ARG ILE ILE HIS ALA THR ALA ASP PHE ASP TYR LYS SEQRES 5 A 231 ASN ILE THR LYS ILE HIS PRO GLN ALA ILE ASP SER GLY SEQRES 6 A 231 ILE GLN ALA LEU LYS LYS GLY CYS PRO ILE VAL CYS ASP SEQRES 7 A 231 VAL GLN MET ILE LEU SER GLY LEU ASN PRO GLU ARG LEU SEQRES 8 A 231 LYS VAL TYR GLY CYS LYS THR TYR CYS PHE ILE SER ASP SEQRES 9 A 231 GLU ASP VAL ILE GLU ASN ALA LYS ARG LYS ASN SER THR SEQRES 10 A 231 ARG ALA ILE GLU SER ILE GLN LYS ALA ASN SER PHE ASN SEQRES 11 A 231 LEU LEU ASN GLU SER ILE ILE VAL ILE GLY ASN ALA PRO SEQRES 12 A 231 THR ALA LEU LEU GLU ILE GLU LYS LEU ILE ARG GLN GLU SEQRES 13 A 231 GLY ILE LYS PRO ALA LEU ILE VAL GLY VAL PRO VAL GLY SEQRES 14 A 231 PHE VAL SER ALA LYS GLU SER LYS GLU SER ILE LEU LYS SEQRES 15 A 231 LEU GLU TYR TYR ASN VAL THR SER ILE PRO TYR ILE LEU SEQRES 16 A 231 THR MET GLY ARG LYS GLY GLY SER THR ILE ALA VAL ALA SEQRES 17 A 231 ILE LEU HIS ALA LEU LEU LEU LEU SER SER LYS ARG GLY SEQRES 18 A 231 GLU ARG LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 231 MET ASN ASP MET ARG GLN ILE THR ASN LEU GLY ARG ASN SEQRES 2 B 231 ILE GLU ASN LYS SER PHE SER ILE ILE ASP GLU GLU ALA SEQRES 3 B 231 GLY PRO HIS SER PHE ALA GLN GLU GLU TRP GLU VAL VAL SEQRES 4 B 231 ARG ARG ILE ILE HIS ALA THR ALA ASP PHE ASP TYR LYS SEQRES 5 B 231 ASN ILE THR LYS ILE HIS PRO GLN ALA ILE ASP SER GLY SEQRES 6 B 231 ILE GLN ALA LEU LYS LYS GLY CYS PRO ILE VAL CYS ASP SEQRES 7 B 231 VAL GLN MET ILE LEU SER GLY LEU ASN PRO GLU ARG LEU SEQRES 8 B 231 LYS VAL TYR GLY CYS LYS THR TYR CYS PHE ILE SER ASP SEQRES 9 B 231 GLU ASP VAL ILE GLU ASN ALA LYS ARG LYS ASN SER THR SEQRES 10 B 231 ARG ALA ILE GLU SER ILE GLN LYS ALA ASN SER PHE ASN SEQRES 11 B 231 LEU LEU ASN GLU SER ILE ILE VAL ILE GLY ASN ALA PRO SEQRES 12 B 231 THR ALA LEU LEU GLU ILE GLU LYS LEU ILE ARG GLN GLU SEQRES 13 B 231 GLY ILE LYS PRO ALA LEU ILE VAL GLY VAL PRO VAL GLY SEQRES 14 B 231 PHE VAL SER ALA LYS GLU SER LYS GLU SER ILE LEU LYS SEQRES 15 B 231 LEU GLU TYR TYR ASN VAL THR SER ILE PRO TYR ILE LEU SEQRES 16 B 231 THR MET GLY ARG LYS GLY GLY SER THR ILE ALA VAL ALA SEQRES 17 B 231 ILE LEU HIS ALA LEU LEU LEU LEU SER SER LYS ARG GLY SEQRES 18 B 231 GLU ARG LEU GLU HIS HIS HIS HIS HIS HIS HET CL A1003 1 HET CL A1004 1 HET CL A1005 1 HET CL A1007 1 HET P6G A 301 19 HET CL B1001 1 HET CL B1002 1 HET CL B1006 1 HET CL B1008 1 HET P33 B1301 22 HETNAM CL CHLORIDE ION HETNAM P6G HEXAETHYLENE GLYCOL HETNAM P33 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL HETSYN P6G POLYETHYLENE GLYCOL PEG400 HETSYN P33 HEPTAETHYLENE GLYCOL; PEG330 FORMUL 3 CL 8(CL 1-) FORMUL 7 P6G C12 H26 O7 FORMUL 12 P33 C14 H30 O8 FORMUL 13 HOH *63(H2 O) HELIX 1 1 THR A 8 GLY A 27 1 20 HELIX 2 2 ALA A 32 ALA A 47 1 16 HELIX 3 3 ASP A 50 ILE A 54 1 5 HELIX 4 4 GLN A 60 LYS A 71 1 12 HELIX 5 5 VAL A 79 SER A 84 1 6 HELIX 6 6 ASN A 87 GLY A 95 1 9 HELIX 7 7 ASP A 104 ASN A 115 1 12 HELIX 8 8 THR A 117 SER A 128 1 12 HELIX 9 9 ALA A 142 GLN A 155 1 14 HELIX 10 10 SER A 172 ASN A 187 1 16 HELIX 11 11 GLY A 202 SER A 218 1 17 HELIX 12 12 THR B 8 GLY B 27 1 20 HELIX 13 13 ALA B 32 ALA B 47 1 16 HELIX 14 14 ASP B 50 ILE B 54 1 5 HELIX 15 15 GLN B 60 LYS B 71 1 12 HELIX 16 16 VAL B 79 SER B 84 1 6 HELIX 17 17 ASN B 87 VAL B 93 1 7 HELIX 18 18 CYS B 100 SER B 103 5 4 HELIX 19 19 ASP B 104 ASN B 115 1 12 HELIX 20 20 THR B 117 PHE B 129 1 13 HELIX 21 21 ALA B 142 GLU B 156 1 15 HELIX 22 22 SER B 172 ASN B 187 1 16 HELIX 23 23 GLY B 202 LYS B 219 1 18 SHEET 1 A 2 THR A 55 ILE A 57 0 SHEET 2 A 2 ILE A 194 THR A 196 -1 O LEU A 195 N LYS A 56 SHEET 1 B 4 THR A 98 TYR A 99 0 SHEET 2 B 4 ILE A 75 CYS A 77 1 N ILE A 75 O TYR A 99 SHEET 3 B 4 ILE A 136 ILE A 139 1 O VAL A 138 N VAL A 76 SHEET 4 B 4 LEU A 162 GLY A 165 1 O VAL A 164 N ILE A 137 SHEET 1 C 6 THR B 55 ILE B 57 0 SHEET 2 C 6 TYR B 193 THR B 196 -1 O LEU B 195 N LYS B 56 SHEET 3 C 6 LEU B 162 GLY B 165 1 N ILE B 163 O ILE B 194 SHEET 4 C 6 ILE B 136 ILE B 139 1 N ILE B 137 O VAL B 164 SHEET 5 C 6 ILE B 75 CYS B 77 1 N VAL B 76 O VAL B 138 SHEET 6 C 6 THR B 98 TYR B 99 1 O TYR B 99 N CYS B 77 SITE 1 AC1 3 ALA B 142 PRO B 143 THR B 144 SITE 1 AC2 6 PRO B 143 GLY B 169 PHE B 170 VAL B 171 SITE 2 AC2 6 SER B 172 ALA B 173 SITE 1 AC3 4 PRO A 143 PHE A 170 VAL A 171 SER A 172 SITE 1 AC4 3 ALA A 142 PRO A 143 THR A 144 SITE 1 AC5 1 SER A 30 SITE 1 AC6 2 HIS B 29 SER B 30 SITE 1 AC7 1 SER A 203 SITE 1 AC8 2 ASN B 141 SER B 203 SITE 1 AC9 4 GLU A 178 LYS A 182 TYR A 185 TYR A 186 SITE 1 BC1 4 GLU B 178 LYS B 182 TYR B 185 HOH B1333 CRYST1 113.078 113.078 114.502 90.00 90.00 90.00 P 42 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008843 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008843 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008733 0.00000