data_2AGO # _entry.id 2AGO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.376 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2AGO pdb_00002ago 10.2210/pdb2ago/pdb NDB PD0697 ? ? RCSB RCSB033871 ? ? WWPDB D_1000033871 ? ? # _pdbx_database_status.entry_id 2AGO _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2005-07-27 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ling, H.' 1 'Yang, W.' 2 # _citation.id primary _citation.title 'Fidelity of Dpo4: effect of metal ions, nucleotide selection and pyrophosphorolysis.' _citation.journal_abbrev 'Embo J.' _citation.journal_volume 24 _citation.page_first 2957 _citation.page_last 2967 _citation.year 2005 _citation.journal_id_ASTM EMJODG _citation.country UK _citation.journal_id_ISSN 0261-4189 _citation.journal_id_CSD 0897 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16107880 _citation.pdbx_database_id_DOI 10.1038/sj.emboj.7600786 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Vaisman, A.' 1 ? primary 'Ling, H.' 2 ? primary 'Woodgate, R.' 3 ? primary 'Yang, W.' 4 ? # _cell.entry_id 2AGO _cell.length_a 99.044 _cell.length_b 101.939 _cell.length_c 53.017 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2AGO _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*CP*G)-3') ; 4425.876 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(*TP*TP*TP*TP*GP*AP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3') ; 5064.283 1 ? ? ? ? 3 polymer man 'DNA polymerase IV' 39019.523 1 2.7.7.7 ? ? ? 4 non-polymer syn 'MAGNESIUM ION' 24.305 4 ? ? ? ? 5 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 6 non-polymer syn 'PYROPHOSPHATE 2-' 175.959 1 ? ? ? ? 7 water nat water 18.015 154 ? ? ? ? # _entity_name_com.entity_id 3 _entity_name_com.name 'Pol IV' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DG)(DG)(DG)(DG)(DG)(DA)(DA)(DG)(DG)(DA)(DT)(DT)(DC)(DG)' GGGGGAAGGATTCG B ? 2 polydeoxyribonucleotide no no '(DT)(DT)(DT)(DT)(DG)(DA)(DA)(DT)(DC)(DC)(DT)(DT)(DC)(DC)(DC)(DC)(DC)' TTTTGAATCCTTCCCCC C ? 3 'polypeptide(L)' no no ;MIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEV YQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKP NGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTR VRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQ KILEEDERKIRRIGVRFSKFI ; ;MIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEV YQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKP NGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTR VRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQ KILEEDERKIRRIGVRFSKFI ; A ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DG n 1 3 DG n 1 4 DG n 1 5 DG n 1 6 DA n 1 7 DA n 1 8 DG n 1 9 DG n 1 10 DA n 1 11 DT n 1 12 DT n 1 13 DC n 1 14 DG n 2 1 DT n 2 2 DT n 2 3 DT n 2 4 DT n 2 5 DG n 2 6 DA n 2 7 DA n 2 8 DT n 2 9 DC n 2 10 DC n 2 11 DT n 2 12 DT n 2 13 DC n 2 14 DC n 2 15 DC n 2 16 DC n 2 17 DC n 3 1 MET n 3 2 ILE n 3 3 VAL n 3 4 LEU n 3 5 PHE n 3 6 VAL n 3 7 ASP n 3 8 PHE n 3 9 ASP n 3 10 TYR n 3 11 PHE n 3 12 TYR n 3 13 ALA n 3 14 GLN n 3 15 VAL n 3 16 GLU n 3 17 GLU n 3 18 VAL n 3 19 LEU n 3 20 ASN n 3 21 PRO n 3 22 SER n 3 23 LEU n 3 24 LYS n 3 25 GLY n 3 26 LYS n 3 27 PRO n 3 28 VAL n 3 29 VAL n 3 30 VAL n 3 31 CYS n 3 32 VAL n 3 33 PHE n 3 34 SER n 3 35 GLY n 3 36 ARG n 3 37 PHE n 3 38 GLU n 3 39 ASP n 3 40 SER n 3 41 GLY n 3 42 ALA n 3 43 VAL n 3 44 ALA n 3 45 THR n 3 46 ALA n 3 47 ASN n 3 48 TYR n 3 49 GLU n 3 50 ALA n 3 51 ARG n 3 52 LYS n 3 53 PHE n 3 54 GLY n 3 55 VAL n 3 56 LYS n 3 57 ALA n 3 58 GLY n 3 59 ILE n 3 60 PRO n 3 61 ILE n 3 62 VAL n 3 63 GLU n 3 64 ALA n 3 65 LYS n 3 66 LYS n 3 67 ILE n 3 68 LEU n 3 69 PRO n 3 70 ASN n 3 71 ALA n 3 72 VAL n 3 73 TYR n 3 74 LEU n 3 75 PRO n 3 76 MET n 3 77 ARG n 3 78 LYS n 3 79 GLU n 3 80 VAL n 3 81 TYR n 3 82 GLN n 3 83 GLN n 3 84 VAL n 3 85 SER n 3 86 SER n 3 87 ARG n 3 88 ILE n 3 89 MET n 3 90 ASN n 3 91 LEU n 3 92 LEU n 3 93 ARG n 3 94 GLU n 3 95 TYR n 3 96 SER n 3 97 GLU n 3 98 LYS n 3 99 ILE n 3 100 GLU n 3 101 ILE n 3 102 ALA n 3 103 SER n 3 104 ILE n 3 105 ASP n 3 106 GLU n 3 107 ALA n 3 108 TYR n 3 109 LEU n 3 110 ASP n 3 111 ILE n 3 112 SER n 3 113 ASP n 3 114 LYS n 3 115 VAL n 3 116 ARG n 3 117 ASP n 3 118 TYR n 3 119 ARG n 3 120 GLU n 3 121 ALA n 3 122 TYR n 3 123 ASN n 3 124 LEU n 3 125 GLY n 3 126 LEU n 3 127 GLU n 3 128 ILE n 3 129 LYS n 3 130 ASN n 3 131 LYS n 3 132 ILE n 3 133 LEU n 3 134 GLU n 3 135 LYS n 3 136 GLU n 3 137 LYS n 3 138 ILE n 3 139 THR n 3 140 VAL n 3 141 THR n 3 142 VAL n 3 143 GLY n 3 144 ILE n 3 145 SER n 3 146 LYS n 3 147 ASN n 3 148 LYS n 3 149 VAL n 3 150 PHE n 3 151 ALA n 3 152 LYS n 3 153 ILE n 3 154 ALA n 3 155 ALA n 3 156 ASP n 3 157 MET n 3 158 ALA n 3 159 LYS n 3 160 PRO n 3 161 ASN n 3 162 GLY n 3 163 ILE n 3 164 LYS n 3 165 VAL n 3 166 ILE n 3 167 ASP n 3 168 ASP n 3 169 GLU n 3 170 GLU n 3 171 VAL n 3 172 LYS n 3 173 ARG n 3 174 LEU n 3 175 ILE n 3 176 ARG n 3 177 GLU n 3 178 LEU n 3 179 ASP n 3 180 ILE n 3 181 ALA n 3 182 ASP n 3 183 VAL n 3 184 PRO n 3 185 GLY n 3 186 ILE n 3 187 GLY n 3 188 ASN n 3 189 ILE n 3 190 THR n 3 191 ALA n 3 192 GLU n 3 193 LYS n 3 194 LEU n 3 195 LYS n 3 196 LYS n 3 197 LEU n 3 198 GLY n 3 199 ILE n 3 200 ASN n 3 201 LYS n 3 202 LEU n 3 203 VAL n 3 204 ASP n 3 205 THR n 3 206 LEU n 3 207 SER n 3 208 ILE n 3 209 GLU n 3 210 PHE n 3 211 ASP n 3 212 LYS n 3 213 LEU n 3 214 LYS n 3 215 GLY n 3 216 MET n 3 217 ILE n 3 218 GLY n 3 219 GLU n 3 220 ALA n 3 221 LYS n 3 222 ALA n 3 223 LYS n 3 224 TYR n 3 225 LEU n 3 226 ILE n 3 227 SER n 3 228 LEU n 3 229 ALA n 3 230 ARG n 3 231 ASP n 3 232 GLU n 3 233 TYR n 3 234 ASN n 3 235 GLU n 3 236 PRO n 3 237 ILE n 3 238 ARG n 3 239 THR n 3 240 ARG n 3 241 VAL n 3 242 ARG n 3 243 LYS n 3 244 SER n 3 245 ILE n 3 246 GLY n 3 247 ARG n 3 248 ILE n 3 249 VAL n 3 250 THR n 3 251 MET n 3 252 LYS n 3 253 ARG n 3 254 ASN n 3 255 SER n 3 256 ARG n 3 257 ASN n 3 258 LEU n 3 259 GLU n 3 260 GLU n 3 261 ILE n 3 262 LYS n 3 263 PRO n 3 264 TYR n 3 265 LEU n 3 266 PHE n 3 267 ARG n 3 268 ALA n 3 269 ILE n 3 270 GLU n 3 271 GLU n 3 272 SER n 3 273 TYR n 3 274 TYR n 3 275 LYS n 3 276 LEU n 3 277 ASP n 3 278 LYS n 3 279 ARG n 3 280 ILE n 3 281 PRO n 3 282 LYS n 3 283 ALA n 3 284 ILE n 3 285 HIS n 3 286 VAL n 3 287 VAL n 3 288 ALA n 3 289 VAL n 3 290 THR n 3 291 GLU n 3 292 ASP n 3 293 LEU n 3 294 ASP n 3 295 ILE n 3 296 VAL n 3 297 SER n 3 298 ARG n 3 299 GLY n 3 300 ARG n 3 301 THR n 3 302 PHE n 3 303 PRO n 3 304 HIS n 3 305 GLY n 3 306 ILE n 3 307 SER n 3 308 LYS n 3 309 GLU n 3 310 THR n 3 311 ALA n 3 312 TYR n 3 313 SER n 3 314 GLU n 3 315 SER n 3 316 VAL n 3 317 LYS n 3 318 LEU n 3 319 LEU n 3 320 GLN n 3 321 LYS n 3 322 ILE n 3 323 LEU n 3 324 GLU n 3 325 GLU n 3 326 ASP n 3 327 GLU n 3 328 ARG n 3 329 LYS n 3 330 ILE n 3 331 ARG n 3 332 ARG n 3 333 ILE n 3 334 GLY n 3 335 VAL n 3 336 ARG n 3 337 PHE n 3 338 SER n 3 339 LYS n 3 340 PHE n 3 341 ILE n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Sulfolobus _entity_src_gen.pdbx_gene_src_gene 'dbh, dpo4' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Sulfolobus solfataricus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2287 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample ? ? ? ? ? 'Chemically synthesized' 2 1 sample ? ? ? ? ? 'Chemically synthesized' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP DPO42_SULSO Q97W02 3 ;MIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEV YQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKP NGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTR VRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQ KILEEDERKIRRIGVRFSKFI ; 1 ? 2 PDB 2AGO 2AGO 1 ? ? ? 3 PDB 2AGO 2AGO 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2AGO A 1 ? 341 ? Q97W02 1 ? 341 ? 1 341 2 2 2AGO B 1 ? 14 ? 2AGO 1801 ? 1814 ? 1801 1814 3 3 2AGO C 1 ? 17 ? 2AGO 1902 ? 1918 ? 1902 1918 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 POP non-polymer . 'PYROPHOSPHATE 2-' ? 'H2 O7 P2 -2' 175.959 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2AGO _exptl.crystals_number ? _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.76 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 55.41 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _diffrn.id 1 _diffrn.ambient_temp 95.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 2004-12-29 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Osmic Focussing Mirrors' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? # _reflns.entry_id 2AGO _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 2.85 _reflns.d_resolution_low 30.0 _reflns.number_all 13102 _reflns.number_obs 12652 _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.ls_d_res_high 2.850 _refine.ls_d_res_low 30.0 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 96.600 _refine.ls_number_reflns_obs 12652 _refine.ls_R_factor_R_work 0.22 _refine.ls_R_factor_R_free 0.263 _refine.ls_percent_reflns_R_free 8.000 _refine.ls_number_reflns_R_free 1053 _refine.B_iso_mean 60.483 _refine.solvent_model_param_bsol 28.564 _refine.aniso_B[1][1] 2.381 _refine.aniso_B[2][2] -5.470 _refine.aniso_B[3][3] 3.089 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.entry_id 2AGO _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 13102 _refine.ls_R_factor_all 0.22 _refine.ls_R_factor_obs 0.22 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 1JX4 _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details ramdom _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.details ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_overall_ESU_R ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2744 _refine_hist.pdbx_number_atoms_nucleic_acid 629 _refine_hist.pdbx_number_atoms_ligand 14 _refine_hist.number_atoms_solvent 154 _refine_hist.number_atoms_total 3541 _refine_hist.d_res_high 2.850 _refine_hist.d_res_low 30.0 # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 CNS_TOPPAR:protein_rep.param ? 'X-RAY DIFFRACTION' 2 CNS_TOPPAR:dna-rna.param ? 'X-RAY DIFFRACTION' 3 CNS_TOPPAR:ion.param ? 'X-RAY DIFFRACTION' 4 CNS_TOPPAR:water_rep.param ? 'X-RAY DIFFRACTION' 5 pp.par ? 'X-RAY DIFFRACTION' # _struct.entry_id 2AGO _struct.title 'Fidelity of Dpo4: effect of metal ions, nucleotide selection and pyrophosphorolysis' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2AGO _struct_keywords.pdbx_keywords TRANSFERASE/DNA _struct_keywords.text 'base stacking, fidelity, metal ion, mismatch, pyrophosphorolysis, TRANSFERASE-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? G N N 4 ? H N N 4 ? I N N 6 ? J N N 7 ? K N N 7 ? L N N 7 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 TYR C 10 ? ASN C 20 ? TYR A 10 ASN A 20 1 ? 11 HELX_P HELX_P2 2 PRO C 21 ? LYS C 24 ? PRO A 21 LYS A 24 5 ? 4 HELX_P HELX_P3 3 ASN C 47 ? PHE C 53 ? ASN A 47 PHE A 53 1 ? 7 HELX_P HELX_P4 4 PRO C 60 ? LEU C 68 ? PRO A 60 LEU A 68 1 ? 9 HELX_P HELX_P5 5 ARG C 77 ? GLU C 94 ? ARG A 77 GLU A 94 1 ? 18 HELX_P HELX_P6 6 ASP C 117 ? GLU C 136 ? ASP A 117 GLU A 136 1 ? 20 HELX_P HELX_P7 7 ASN C 147 ? LYS C 159 ? ASN A 147 LYS A 159 1 ? 13 HELX_P HELX_P8 8 ASP C 167 ? LEU C 178 ? ASP A 167 LEU A 178 1 ? 12 HELX_P HELX_P9 9 ASP C 179 ? VAL C 183 ? ASP A 179 VAL A 183 5 ? 5 HELX_P HELX_P10 10 GLY C 187 ? LYS C 196 ? GLY A 187 LYS A 196 1 ? 10 HELX_P HELX_P11 11 LEU C 202 ? ILE C 208 ? LEU A 202 ILE A 208 5 ? 7 HELX_P HELX_P12 12 GLU C 209 ? GLY C 218 ? GLU A 209 GLY A 218 1 ? 10 HELX_P HELX_P13 13 GLY C 218 ? ARG C 230 ? GLY A 218 ARG A 230 1 ? 13 HELX_P HELX_P14 14 ASN C 257 ? ASP C 277 ? ASN A 257 ASP A 277 1 ? 21 HELX_P HELX_P15 15 SER C 307 ? ASP C 326 ? SER A 307 ASP A 326 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? D MG . MG ? ? ? 1_555 K HOH . O ? ? B MG 405 C HOH 70 1_555 ? ? ? ? ? ? ? 2.584 ? ? metalc2 metalc ? ? D MG . MG ? ? ? 1_555 K HOH . O ? ? B MG 405 C HOH 93 1_555 ? ? ? ? ? ? ? 2.445 ? ? metalc3 metalc ? ? A DG 14 OP1 ? ? ? 1_555 E MG . MG ? ? B DG 1814 A MG 402 1_555 ? ? ? ? ? ? ? 2.633 ? ? metalc4 metalc ? ? A DG 14 "O5'" ? ? ? 1_555 E MG . MG ? ? B DG 1814 A MG 402 1_555 ? ? ? ? ? ? ? 2.838 ? ? metalc5 metalc ? ? C ASP 7 OD1 ? ? ? 1_555 F CA . CA ? ? A ASP 7 A CA 403 1_555 ? ? ? ? ? ? ? 2.063 ? ? metalc6 metalc ? ? C PHE 8 O ? ? ? 1_555 F CA . CA ? ? A PHE 8 A CA 403 1_555 ? ? ? ? ? ? ? 2.343 ? ? metalc7 metalc ? ? C ASP 105 OD1 ? ? ? 1_555 E MG . MG ? ? A ASP 105 A MG 402 1_555 ? ? ? ? ? ? ? 2.770 ? ? metalc8 metalc ? ? C ASP 105 OD2 ? ? ? 1_555 F CA . CA ? ? A ASP 105 A CA 403 1_555 ? ? ? ? ? ? ? 2.428 ? ? metalc9 metalc ? ? C ALA 181 O ? ? ? 1_555 G MG . MG ? ? A ALA 181 A MG 404 1_555 ? ? ? ? ? ? ? 2.376 ? ? metalc10 metalc ? ? C ILE 186 O ? ? ? 1_555 G MG . MG ? ? A ILE 186 A MG 404 1_555 ? ? ? ? ? ? ? 2.700 ? ? metalc11 metalc ? ? C ASP 294 OD1 ? ? ? 1_555 H MG . MG ? ? A ASP 294 A MG 406 1_555 ? ? ? ? ? ? ? 2.904 ? ? metalc12 metalc ? ? C ASP 294 OD2 ? ? ? 1_555 H MG . MG ? ? A ASP 294 A MG 406 1_555 ? ? ? ? ? ? ? 2.370 ? ? metalc13 metalc ? ? I POP . O2 ? ? ? 1_555 E MG . MG ? ? A POP 401 A MG 402 1_555 ? ? ? ? ? ? ? 2.713 ? ? metalc14 metalc ? ? I POP . O1 ? ? ? 1_555 E MG . MG ? ? A POP 401 A MG 402 1_555 ? ? ? ? ? ? ? 2.650 ? ? metalc15 metalc ? ? I POP . O1 ? ? ? 1_555 F CA . CA ? ? A POP 401 A CA 403 1_555 ? ? ? ? ? ? ? 2.900 ? ? metalc16 metalc ? ? I POP . O ? ? ? 1_555 F CA . CA ? ? A POP 401 A CA 403 1_555 ? ? ? ? ? ? ? 2.326 ? ? metalc17 metalc ? ? I POP . O4 ? ? ? 1_555 F CA . CA ? ? A POP 401 A CA 403 1_555 ? ? ? ? ? ? ? 2.795 ? ? metalc18 metalc ? ? E MG . MG ? ? ? 1_555 L HOH . O ? ? A MG 402 A HOH 416 1_555 ? ? ? ? ? ? ? 1.876 ? ? metalc19 metalc ? ? G MG . MG ? ? ? 1_555 L HOH . O ? ? A MG 404 A HOH 431 1_555 ? ? ? ? ? ? ? 2.009 ? ? metalc20 metalc ? ? G MG . MG ? ? ? 1_555 L HOH . O ? ? A MG 404 A HOH 446 1_555 ? ? ? ? ? ? ? 2.634 ? ? metalc21 metalc ? ? G MG . MG ? ? ? 1_555 L HOH . O ? ? A MG 404 A HOH 475 1_555 ? ? ? ? ? ? ? 2.415 ? ? hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 B DC 17 N3 ? ? B DG 1801 C DC 1918 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 B DC 17 O2 ? ? B DG 1801 C DC 1918 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 B DC 17 N4 ? ? B DG 1801 C DC 1918 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DC 16 N3 ? ? B DG 1802 C DC 1917 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DC 16 O2 ? ? B DG 1802 C DC 1917 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DC 16 N4 ? ? B DG 1802 C DC 1917 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 3 N1 ? ? ? 1_555 B DC 15 N3 ? ? B DG 1803 C DC 1916 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 3 N2 ? ? ? 1_555 B DC 15 O2 ? ? B DG 1803 C DC 1916 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DC 15 N4 ? ? B DG 1803 C DC 1916 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DC 14 N3 ? ? B DG 1804 C DC 1915 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DC 14 O2 ? ? B DG 1804 C DC 1915 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DC 14 N4 ? ? B DG 1804 C DC 1915 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DG 5 N1 ? ? ? 1_555 B DC 13 N3 ? ? B DG 1805 C DC 1914 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DG 5 N2 ? ? ? 1_555 B DC 13 O2 ? ? B DG 1805 C DC 1914 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DG 5 O6 ? ? ? 1_555 B DC 13 N4 ? ? B DG 1805 C DC 1914 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DA 6 N6 ? ? ? 1_555 B DT 11 O4 ? ? B DA 1806 C DT 1912 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog17 hydrog ? ? A DA 6 N1 ? ? ? 1_555 B DT 12 N3 ? ? B DA 1806 C DT 1913 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DA 6 N6 ? ? ? 1_555 B DT 12 O4 ? ? B DA 1806 C DT 1913 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DA 7 N1 ? ? ? 1_555 B DT 11 N3 ? ? B DA 1807 C DT 1912 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DA 7 N6 ? ? ? 1_555 B DT 11 O4 ? ? B DA 1807 C DT 1912 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 8 N1 ? ? ? 1_555 B DC 10 N3 ? ? B DG 1808 C DC 1911 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 8 N2 ? ? ? 1_555 B DC 10 O2 ? ? B DG 1808 C DC 1911 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DG 8 O6 ? ? ? 1_555 B DC 10 N4 ? ? B DG 1808 C DC 1911 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DG 9 N1 ? ? ? 1_555 B DC 9 N3 ? ? B DG 1809 C DC 1910 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DG 9 N2 ? ? ? 1_555 B DC 9 O2 ? ? B DG 1809 C DC 1910 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DG 9 O6 ? ? ? 1_555 B DC 9 N4 ? ? B DG 1809 C DC 1910 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DA 10 N1 ? ? ? 1_555 B DT 8 N3 ? ? B DA 1810 C DT 1909 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DA 10 N6 ? ? ? 1_555 B DT 8 O4 ? ? B DA 1810 C DT 1909 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DT 11 N3 ? ? ? 1_555 B DA 7 N1 ? ? B DT 1811 C DA 1908 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DT 11 O4 ? ? ? 1_555 B DA 7 N6 ? ? B DT 1811 C DA 1908 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DT 12 N3 ? ? ? 1_555 B DA 6 N1 ? ? B DT 1812 C DA 1907 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DT 12 O4 ? ? ? 1_555 B DA 6 N6 ? ? B DT 1812 C DA 1907 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DC 13 N3 ? ? ? 1_555 B DG 5 N1 ? ? B DC 1813 C DG 1906 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DC 13 N4 ? ? ? 1_555 B DG 5 O6 ? ? B DC 1813 C DG 1906 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DC 13 O2 ? ? ? 1_555 B DG 5 N2 ? ? B DC 1813 C DG 1906 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DG 14 N1 ? ? ? 1_555 B DT 4 O4 ? ? B DG 1814 C DT 1905 1_555 ? ? ? ? ? ? 'DG-DT MISPAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id LYS _struct_mon_prot_cis.label_seq_id 159 _struct_mon_prot_cis.label_asym_id C _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id LYS _struct_mon_prot_cis.auth_seq_id 159 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 160 _struct_mon_prot_cis.pdbx_label_asym_id_2 C _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 160 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -1.28 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 3 ? C ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? parallel B 1 2 ? anti-parallel B 2 3 ? parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE C 99 ? SER C 103 ? ILE A 99 SER A 103 A 2 GLU C 106 ? ASP C 110 ? GLU A 106 ASP A 110 A 3 VAL C 3 ? PHE C 8 ? VAL A 3 PHE A 8 A 4 VAL C 140 ? SER C 145 ? VAL A 140 SER A 145 A 5 ILE C 163 ? VAL C 165 ? ILE A 163 VAL A 165 B 1 GLY C 41 ? ALA C 46 ? GLY A 41 ALA A 46 B 2 VAL C 28 ? PHE C 33 ? VAL A 28 PHE A 33 B 3 VAL C 72 ? PRO C 75 ? VAL A 72 PRO A 75 C 1 SER C 244 ? SER C 255 ? SER A 244 SER A 255 C 2 ILE C 330 ? SER C 338 ? ILE A 330 SER A 338 C 3 ALA C 283 ? THR C 290 ? ALA A 283 THR A 290 C 4 ILE C 295 ? THR C 301 ? ILE A 295 THR A 301 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLU C 100 ? N GLU A 100 O TYR C 108 ? O TYR A 108 A 2 3 O ALA C 107 ? O ALA A 107 N VAL C 6 ? N VAL A 6 A 3 4 N VAL C 3 ? N VAL A 3 O SER C 145 ? O SER A 145 A 4 5 N ILE C 144 ? N ILE A 144 O LYS C 164 ? O LYS A 164 B 1 2 O ALA C 44 ? O ALA A 44 N VAL C 30 ? N VAL A 30 B 2 3 N CYS C 31 ? N CYS A 31 O LEU C 74 ? O LEU A 74 C 1 2 N ILE C 245 ? N ILE A 245 O PHE C 337 ? O PHE A 337 C 2 3 O ARG C 331 ? O ARG A 331 N VAL C 289 ? N VAL A 289 C 3 4 N ALA C 288 ? N ALA A 288 O VAL C 296 ? O VAL A 296 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 402 ? 5 'BINDING SITE FOR RESIDUE MG A 402' AC2 Software A CA 403 ? 4 'BINDING SITE FOR RESIDUE CA A 403' AC3 Software A MG 404 ? 5 'BINDING SITE FOR RESIDUE MG A 404' AC4 Software B MG 405 ? 2 'BINDING SITE FOR RESIDUE MG B 405' AC5 Software A MG 406 ? 1 'BINDING SITE FOR RESIDUE MG A 406' AC6 Software A POP 401 ? 13 'BINDING SITE FOR RESIDUE POP A 401' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 ASP C 105 ? ASP A 105 . ? 1_555 ? 2 AC1 5 GLU C 106 ? GLU A 106 . ? 1_555 ? 3 AC1 5 POP I . ? POP A 401 . ? 1_555 ? 4 AC1 5 HOH L . ? HOH A 416 . ? 1_555 ? 5 AC1 5 DG A 14 ? DG B 1814 . ? 1_555 ? 6 AC2 4 ASP C 7 ? ASP A 7 . ? 1_555 ? 7 AC2 4 PHE C 8 ? PHE A 8 . ? 1_555 ? 8 AC2 4 ASP C 105 ? ASP A 105 . ? 1_555 ? 9 AC2 4 POP I . ? POP A 401 . ? 1_555 ? 10 AC3 5 ALA C 181 ? ALA A 181 . ? 1_555 ? 11 AC3 5 ILE C 186 ? ILE A 186 . ? 1_555 ? 12 AC3 5 HOH L . ? HOH A 431 . ? 1_555 ? 13 AC3 5 HOH L . ? HOH A 446 . ? 1_555 ? 14 AC3 5 HOH L . ? HOH A 475 . ? 1_555 ? 15 AC4 2 HOH K . ? HOH C 70 . ? 1_555 ? 16 AC4 2 HOH K . ? HOH C 93 . ? 1_555 ? 17 AC5 1 ASP C 294 ? ASP A 294 . ? 1_555 ? 18 AC6 13 ASP C 7 ? ASP A 7 . ? 1_555 ? 19 AC6 13 PHE C 8 ? PHE A 8 . ? 1_555 ? 20 AC6 13 TYR C 10 ? TYR A 10 . ? 1_555 ? 21 AC6 13 PHE C 11 ? PHE A 11 . ? 1_555 ? 22 AC6 13 THR C 45 ? THR A 45 . ? 1_555 ? 23 AC6 13 ARG C 51 ? ARG A 51 . ? 1_555 ? 24 AC6 13 ASP C 105 ? ASP A 105 . ? 1_555 ? 25 AC6 13 LYS C 159 ? LYS A 159 . ? 1_555 ? 26 AC6 13 MG E . ? MG A 402 . ? 1_555 ? 27 AC6 13 CA F . ? CA A 403 . ? 1_555 ? 28 AC6 13 HOH L . ? HOH A 409 . ? 1_555 ? 29 AC6 13 HOH L . ? HOH A 416 . ? 1_555 ? 30 AC6 13 DG A 14 ? DG B 1814 . ? 1_555 ? # _atom_sites.entry_id 2AGO _atom_sites.fract_transf_matrix[1][1] 0.010097 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009810 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018862 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1801 1801 DG G B . n A 1 2 DG 2 1802 1802 DG G B . n A 1 3 DG 3 1803 1803 DG G B . n A 1 4 DG 4 1804 1804 DG G B . n A 1 5 DG 5 1805 1805 DG G B . n A 1 6 DA 6 1806 1806 DA A B . n A 1 7 DA 7 1807 1807 DA A B . n A 1 8 DG 8 1808 1808 DG G B . n A 1 9 DG 9 1809 1809 DG G B . n A 1 10 DA 10 1810 1810 DA A B . n A 1 11 DT 11 1811 1811 DT T B . n A 1 12 DT 12 1812 1812 DT T B . n A 1 13 DC 13 1813 1813 DC C B . n A 1 14 DG 14 1814 1814 DG G B . n B 2 1 DT 1 1902 1902 DT T C . n B 2 2 DT 2 1903 1903 DT T C . n B 2 3 DT 3 1904 1904 DT T C . n B 2 4 DT 4 1905 1905 DT T C . n B 2 5 DG 5 1906 1906 DG G C . n B 2 6 DA 6 1907 1907 DA A C . n B 2 7 DA 7 1908 1908 DA A C . n B 2 8 DT 8 1909 1909 DT T C . n B 2 9 DC 9 1910 1910 DC C C . n B 2 10 DC 10 1911 1911 DC C C . n B 2 11 DT 11 1912 1912 DT T C . n B 2 12 DT 12 1913 1913 DT T C . n B 2 13 DC 13 1914 1914 DC C C . n B 2 14 DC 14 1915 1915 DC C C . n B 2 15 DC 15 1916 1916 DC C C . n B 2 16 DC 16 1917 1917 DC C C . n B 2 17 DC 17 1918 1918 DC C C . n C 3 1 MET 1 1 1 MET MET A . n C 3 2 ILE 2 2 2 ILE ILE A . n C 3 3 VAL 3 3 3 VAL VAL A . n C 3 4 LEU 4 4 4 LEU LEU A . n C 3 5 PHE 5 5 5 PHE PHE A . n C 3 6 VAL 6 6 6 VAL VAL A . n C 3 7 ASP 7 7 7 ASP ASP A . n C 3 8 PHE 8 8 8 PHE PHE A . n C 3 9 ASP 9 9 9 ASP ASP A . n C 3 10 TYR 10 10 10 TYR TYR A . n C 3 11 PHE 11 11 11 PHE PHE A . n C 3 12 TYR 12 12 12 TYR TYR A . n C 3 13 ALA 13 13 13 ALA ALA A . n C 3 14 GLN 14 14 14 GLN GLN A . n C 3 15 VAL 15 15 15 VAL VAL A . n C 3 16 GLU 16 16 16 GLU GLU A . n C 3 17 GLU 17 17 17 GLU GLU A . n C 3 18 VAL 18 18 18 VAL VAL A . n C 3 19 LEU 19 19 19 LEU LEU A . n C 3 20 ASN 20 20 20 ASN ASN A . n C 3 21 PRO 21 21 21 PRO PRO A . n C 3 22 SER 22 22 22 SER SER A . n C 3 23 LEU 23 23 23 LEU LEU A . n C 3 24 LYS 24 24 24 LYS LYS A . n C 3 25 GLY 25 25 25 GLY GLY A . n C 3 26 LYS 26 26 26 LYS LYS A . n C 3 27 PRO 27 27 27 PRO PRO A . n C 3 28 VAL 28 28 28 VAL VAL A . n C 3 29 VAL 29 29 29 VAL VAL A . n C 3 30 VAL 30 30 30 VAL VAL A . n C 3 31 CYS 31 31 31 CYS CYS A . n C 3 32 VAL 32 32 32 VAL VAL A . n C 3 33 PHE 33 33 33 PHE PHE A . n C 3 34 SER 34 34 34 SER SER A . n C 3 35 GLY 35 35 35 GLY GLY A . n C 3 36 ARG 36 36 36 ARG ARG A . n C 3 37 PHE 37 37 37 PHE PHE A . n C 3 38 GLU 38 38 38 GLU GLU A . n C 3 39 ASP 39 39 39 ASP ASP A . n C 3 40 SER 40 40 40 SER SER A . n C 3 41 GLY 41 41 41 GLY GLY A . n C 3 42 ALA 42 42 42 ALA ALA A . n C 3 43 VAL 43 43 43 VAL VAL A . n C 3 44 ALA 44 44 44 ALA ALA A . n C 3 45 THR 45 45 45 THR THR A . n C 3 46 ALA 46 46 46 ALA ALA A . n C 3 47 ASN 47 47 47 ASN ASN A . n C 3 48 TYR 48 48 48 TYR TYR A . n C 3 49 GLU 49 49 49 GLU GLU A . n C 3 50 ALA 50 50 50 ALA ALA A . n C 3 51 ARG 51 51 51 ARG ARG A . n C 3 52 LYS 52 52 52 LYS LYS A . n C 3 53 PHE 53 53 53 PHE PHE A . n C 3 54 GLY 54 54 54 GLY GLY A . n C 3 55 VAL 55 55 55 VAL VAL A . n C 3 56 LYS 56 56 56 LYS LYS A . n C 3 57 ALA 57 57 57 ALA ALA A . n C 3 58 GLY 58 58 58 GLY GLY A . n C 3 59 ILE 59 59 59 ILE ILE A . n C 3 60 PRO 60 60 60 PRO PRO A . n C 3 61 ILE 61 61 61 ILE ILE A . n C 3 62 VAL 62 62 62 VAL VAL A . n C 3 63 GLU 63 63 63 GLU GLU A . n C 3 64 ALA 64 64 64 ALA ALA A . n C 3 65 LYS 65 65 65 LYS LYS A . n C 3 66 LYS 66 66 66 LYS LYS A . n C 3 67 ILE 67 67 67 ILE ILE A . n C 3 68 LEU 68 68 68 LEU LEU A . n C 3 69 PRO 69 69 69 PRO PRO A . n C 3 70 ASN 70 70 70 ASN ASN A . n C 3 71 ALA 71 71 71 ALA ALA A . n C 3 72 VAL 72 72 72 VAL VAL A . n C 3 73 TYR 73 73 73 TYR TYR A . n C 3 74 LEU 74 74 74 LEU LEU A . n C 3 75 PRO 75 75 75 PRO PRO A . n C 3 76 MET 76 76 76 MET MET A . n C 3 77 ARG 77 77 77 ARG ARG A . n C 3 78 LYS 78 78 78 LYS LYS A . n C 3 79 GLU 79 79 79 GLU GLU A . n C 3 80 VAL 80 80 80 VAL VAL A . n C 3 81 TYR 81 81 81 TYR TYR A . n C 3 82 GLN 82 82 82 GLN GLN A . n C 3 83 GLN 83 83 83 GLN GLN A . n C 3 84 VAL 84 84 84 VAL VAL A . n C 3 85 SER 85 85 85 SER SER A . n C 3 86 SER 86 86 86 SER SER A . n C 3 87 ARG 87 87 87 ARG ARG A . n C 3 88 ILE 88 88 88 ILE ILE A . n C 3 89 MET 89 89 89 MET MET A . n C 3 90 ASN 90 90 90 ASN ASN A . n C 3 91 LEU 91 91 91 LEU LEU A . n C 3 92 LEU 92 92 92 LEU LEU A . n C 3 93 ARG 93 93 93 ARG ARG A . n C 3 94 GLU 94 94 94 GLU GLU A . n C 3 95 TYR 95 95 95 TYR TYR A . n C 3 96 SER 96 96 96 SER SER A . n C 3 97 GLU 97 97 97 GLU GLU A . n C 3 98 LYS 98 98 98 LYS LYS A . n C 3 99 ILE 99 99 99 ILE ILE A . n C 3 100 GLU 100 100 100 GLU GLU A . n C 3 101 ILE 101 101 101 ILE ILE A . n C 3 102 ALA 102 102 102 ALA ALA A . n C 3 103 SER 103 103 103 SER SER A . n C 3 104 ILE 104 104 104 ILE ILE A . n C 3 105 ASP 105 105 105 ASP ASP A . n C 3 106 GLU 106 106 106 GLU GLU A . n C 3 107 ALA 107 107 107 ALA ALA A . n C 3 108 TYR 108 108 108 TYR TYR A . n C 3 109 LEU 109 109 109 LEU LEU A . n C 3 110 ASP 110 110 110 ASP ASP A . n C 3 111 ILE 111 111 111 ILE ILE A . n C 3 112 SER 112 112 112 SER SER A . n C 3 113 ASP 113 113 113 ASP ASP A . n C 3 114 LYS 114 114 114 LYS LYS A . n C 3 115 VAL 115 115 115 VAL VAL A . n C 3 116 ARG 116 116 116 ARG ARG A . n C 3 117 ASP 117 117 117 ASP ASP A . n C 3 118 TYR 118 118 118 TYR TYR A . n C 3 119 ARG 119 119 119 ARG ARG A . n C 3 120 GLU 120 120 120 GLU GLU A . n C 3 121 ALA 121 121 121 ALA ALA A . n C 3 122 TYR 122 122 122 TYR TYR A . n C 3 123 ASN 123 123 123 ASN ASN A . n C 3 124 LEU 124 124 124 LEU LEU A . n C 3 125 GLY 125 125 125 GLY GLY A . n C 3 126 LEU 126 126 126 LEU LEU A . n C 3 127 GLU 127 127 127 GLU GLU A . n C 3 128 ILE 128 128 128 ILE ILE A . n C 3 129 LYS 129 129 129 LYS LYS A . n C 3 130 ASN 130 130 130 ASN ASN A . n C 3 131 LYS 131 131 131 LYS LYS A . n C 3 132 ILE 132 132 132 ILE ILE A . n C 3 133 LEU 133 133 133 LEU LEU A . n C 3 134 GLU 134 134 134 GLU GLU A . n C 3 135 LYS 135 135 135 LYS LYS A . n C 3 136 GLU 136 136 136 GLU GLU A . n C 3 137 LYS 137 137 137 LYS LYS A . n C 3 138 ILE 138 138 138 ILE ILE A . n C 3 139 THR 139 139 139 THR THR A . n C 3 140 VAL 140 140 140 VAL VAL A . n C 3 141 THR 141 141 141 THR THR A . n C 3 142 VAL 142 142 142 VAL VAL A . n C 3 143 GLY 143 143 143 GLY GLY A . n C 3 144 ILE 144 144 144 ILE ILE A . n C 3 145 SER 145 145 145 SER SER A . n C 3 146 LYS 146 146 146 LYS LYS A . n C 3 147 ASN 147 147 147 ASN ASN A . n C 3 148 LYS 148 148 148 LYS LYS A . n C 3 149 VAL 149 149 149 VAL VAL A . n C 3 150 PHE 150 150 150 PHE PHE A . n C 3 151 ALA 151 151 151 ALA ALA A . n C 3 152 LYS 152 152 152 LYS LYS A . n C 3 153 ILE 153 153 153 ILE ILE A . n C 3 154 ALA 154 154 154 ALA ALA A . n C 3 155 ALA 155 155 155 ALA ALA A . n C 3 156 ASP 156 156 156 ASP ASP A . n C 3 157 MET 157 157 157 MET MET A . n C 3 158 ALA 158 158 158 ALA ALA A . n C 3 159 LYS 159 159 159 LYS LYS A . n C 3 160 PRO 160 160 160 PRO PRO A . n C 3 161 ASN 161 161 161 ASN ASN A . n C 3 162 GLY 162 162 162 GLY GLY A . n C 3 163 ILE 163 163 163 ILE ILE A . n C 3 164 LYS 164 164 164 LYS LYS A . n C 3 165 VAL 165 165 165 VAL VAL A . n C 3 166 ILE 166 166 166 ILE ILE A . n C 3 167 ASP 167 167 167 ASP ASP A . n C 3 168 ASP 168 168 168 ASP ASP A . n C 3 169 GLU 169 169 169 GLU GLU A . n C 3 170 GLU 170 170 170 GLU GLU A . n C 3 171 VAL 171 171 171 VAL VAL A . n C 3 172 LYS 172 172 172 LYS LYS A . n C 3 173 ARG 173 173 173 ARG ARG A . n C 3 174 LEU 174 174 174 LEU LEU A . n C 3 175 ILE 175 175 175 ILE ILE A . n C 3 176 ARG 176 176 176 ARG ARG A . n C 3 177 GLU 177 177 177 GLU GLU A . n C 3 178 LEU 178 178 178 LEU LEU A . n C 3 179 ASP 179 179 179 ASP ASP A . n C 3 180 ILE 180 180 180 ILE ILE A . n C 3 181 ALA 181 181 181 ALA ALA A . n C 3 182 ASP 182 182 182 ASP ASP A . n C 3 183 VAL 183 183 183 VAL VAL A . n C 3 184 PRO 184 184 184 PRO PRO A . n C 3 185 GLY 185 185 185 GLY GLY A . n C 3 186 ILE 186 186 186 ILE ILE A . n C 3 187 GLY 187 187 187 GLY GLY A . n C 3 188 ASN 188 188 188 ASN ASN A . n C 3 189 ILE 189 189 189 ILE ILE A . n C 3 190 THR 190 190 190 THR THR A . n C 3 191 ALA 191 191 191 ALA ALA A . n C 3 192 GLU 192 192 192 GLU GLU A . n C 3 193 LYS 193 193 193 LYS LYS A . n C 3 194 LEU 194 194 194 LEU LEU A . n C 3 195 LYS 195 195 195 LYS LYS A . n C 3 196 LYS 196 196 196 LYS LYS A . n C 3 197 LEU 197 197 197 LEU LEU A . n C 3 198 GLY 198 198 198 GLY GLY A . n C 3 199 ILE 199 199 199 ILE ILE A . n C 3 200 ASN 200 200 200 ASN ASN A . n C 3 201 LYS 201 201 201 LYS LYS A . n C 3 202 LEU 202 202 202 LEU LEU A . n C 3 203 VAL 203 203 203 VAL VAL A . n C 3 204 ASP 204 204 204 ASP ASP A . n C 3 205 THR 205 205 205 THR THR A . n C 3 206 LEU 206 206 206 LEU LEU A . n C 3 207 SER 207 207 207 SER SER A . n C 3 208 ILE 208 208 208 ILE ILE A . n C 3 209 GLU 209 209 209 GLU GLU A . n C 3 210 PHE 210 210 210 PHE PHE A . n C 3 211 ASP 211 211 211 ASP ASP A . n C 3 212 LYS 212 212 212 LYS LYS A . n C 3 213 LEU 213 213 213 LEU LEU A . n C 3 214 LYS 214 214 214 LYS LYS A . n C 3 215 GLY 215 215 215 GLY GLY A . n C 3 216 MET 216 216 216 MET MET A . n C 3 217 ILE 217 217 217 ILE ILE A . n C 3 218 GLY 218 218 218 GLY GLY A . n C 3 219 GLU 219 219 219 GLU GLU A . n C 3 220 ALA 220 220 220 ALA ALA A . n C 3 221 LYS 221 221 221 LYS LYS A . n C 3 222 ALA 222 222 222 ALA ALA A . n C 3 223 LYS 223 223 223 LYS LYS A . n C 3 224 TYR 224 224 224 TYR TYR A . n C 3 225 LEU 225 225 225 LEU LEU A . n C 3 226 ILE 226 226 226 ILE ILE A . n C 3 227 SER 227 227 227 SER SER A . n C 3 228 LEU 228 228 228 LEU LEU A . n C 3 229 ALA 229 229 229 ALA ALA A . n C 3 230 ARG 230 230 230 ARG ARG A . n C 3 231 ASP 231 231 231 ASP ASP A . n C 3 232 GLU 232 232 232 GLU GLU A . n C 3 233 TYR 233 233 233 TYR TYR A . n C 3 234 ASN 234 234 234 ASN ASN A . n C 3 235 GLU 235 235 235 GLU GLU A . n C 3 236 PRO 236 236 236 PRO PRO A . n C 3 237 ILE 237 237 237 ILE ILE A . n C 3 238 ARG 238 238 238 ARG ARG A . n C 3 239 THR 239 239 239 THR THR A . n C 3 240 ARG 240 240 240 ARG ARG A . n C 3 241 VAL 241 241 241 VAL VAL A . n C 3 242 ARG 242 242 242 ARG ARG A . n C 3 243 LYS 243 243 243 LYS LYS A . n C 3 244 SER 244 244 244 SER SER A . n C 3 245 ILE 245 245 245 ILE ILE A . n C 3 246 GLY 246 246 246 GLY GLY A . n C 3 247 ARG 247 247 247 ARG ARG A . n C 3 248 ILE 248 248 248 ILE ILE A . n C 3 249 VAL 249 249 249 VAL VAL A . n C 3 250 THR 250 250 250 THR THR A . n C 3 251 MET 251 251 251 MET MET A . n C 3 252 LYS 252 252 252 LYS LYS A . n C 3 253 ARG 253 253 253 ARG ARG A . n C 3 254 ASN 254 254 254 ASN ASN A . n C 3 255 SER 255 255 255 SER SER A . n C 3 256 ARG 256 256 256 ARG ARG A . n C 3 257 ASN 257 257 257 ASN ASN A . n C 3 258 LEU 258 258 258 LEU LEU A . n C 3 259 GLU 259 259 259 GLU GLU A . n C 3 260 GLU 260 260 260 GLU GLU A . n C 3 261 ILE 261 261 261 ILE ILE A . n C 3 262 LYS 262 262 262 LYS LYS A . n C 3 263 PRO 263 263 263 PRO PRO A . n C 3 264 TYR 264 264 264 TYR TYR A . n C 3 265 LEU 265 265 265 LEU LEU A . n C 3 266 PHE 266 266 266 PHE PHE A . n C 3 267 ARG 267 267 267 ARG ARG A . n C 3 268 ALA 268 268 268 ALA ALA A . n C 3 269 ILE 269 269 269 ILE ILE A . n C 3 270 GLU 270 270 270 GLU GLU A . n C 3 271 GLU 271 271 271 GLU GLU A . n C 3 272 SER 272 272 272 SER SER A . n C 3 273 TYR 273 273 273 TYR TYR A . n C 3 274 TYR 274 274 274 TYR TYR A . n C 3 275 LYS 275 275 275 LYS LYS A . n C 3 276 LEU 276 276 276 LEU LEU A . n C 3 277 ASP 277 277 277 ASP ASP A . n C 3 278 LYS 278 278 278 LYS LYS A . n C 3 279 ARG 279 279 279 ARG ARG A . n C 3 280 ILE 280 280 280 ILE ILE A . n C 3 281 PRO 281 281 281 PRO PRO A . n C 3 282 LYS 282 282 282 LYS LYS A . n C 3 283 ALA 283 283 283 ALA ALA A . n C 3 284 ILE 284 284 284 ILE ILE A . n C 3 285 HIS 285 285 285 HIS HIS A . n C 3 286 VAL 286 286 286 VAL VAL A . n C 3 287 VAL 287 287 287 VAL VAL A . n C 3 288 ALA 288 288 288 ALA ALA A . n C 3 289 VAL 289 289 289 VAL VAL A . n C 3 290 THR 290 290 290 THR THR A . n C 3 291 GLU 291 291 291 GLU GLU A . n C 3 292 ASP 292 292 292 ASP ASP A . n C 3 293 LEU 293 293 293 LEU LEU A . n C 3 294 ASP 294 294 294 ASP ASP A . n C 3 295 ILE 295 295 295 ILE ILE A . n C 3 296 VAL 296 296 296 VAL VAL A . n C 3 297 SER 297 297 297 SER SER A . n C 3 298 ARG 298 298 298 ARG ARG A . n C 3 299 GLY 299 299 299 GLY GLY A . n C 3 300 ARG 300 300 300 ARG ARG A . n C 3 301 THR 301 301 301 THR THR A . n C 3 302 PHE 302 302 302 PHE PHE A . n C 3 303 PRO 303 303 303 PRO PRO A . n C 3 304 HIS 304 304 304 HIS HIS A . n C 3 305 GLY 305 305 305 GLY GLY A . n C 3 306 ILE 306 306 306 ILE ILE A . n C 3 307 SER 307 307 307 SER SER A . n C 3 308 LYS 308 308 308 LYS LYS A . n C 3 309 GLU 309 309 309 GLU GLU A . n C 3 310 THR 310 310 310 THR THR A . n C 3 311 ALA 311 311 311 ALA ALA A . n C 3 312 TYR 312 312 312 TYR TYR A . n C 3 313 SER 313 313 313 SER SER A . n C 3 314 GLU 314 314 314 GLU GLU A . n C 3 315 SER 315 315 315 SER SER A . n C 3 316 VAL 316 316 316 VAL VAL A . n C 3 317 LYS 317 317 317 LYS LYS A . n C 3 318 LEU 318 318 318 LEU LEU A . n C 3 319 LEU 319 319 319 LEU LEU A . n C 3 320 GLN 320 320 320 GLN GLN A . n C 3 321 LYS 321 321 321 LYS LYS A . n C 3 322 ILE 322 322 322 ILE ILE A . n C 3 323 LEU 323 323 323 LEU LEU A . n C 3 324 GLU 324 324 324 GLU GLU A . n C 3 325 GLU 325 325 325 GLU GLU A . n C 3 326 ASP 326 326 326 ASP ASP A . n C 3 327 GLU 327 327 327 GLU GLU A . n C 3 328 ARG 328 328 328 ARG ARG A . n C 3 329 LYS 329 329 329 LYS LYS A . n C 3 330 ILE 330 330 330 ILE ILE A . n C 3 331 ARG 331 331 331 ARG ARG A . n C 3 332 ARG 332 332 332 ARG ARG A . n C 3 333 ILE 333 333 333 ILE ILE A . n C 3 334 GLY 334 334 334 GLY GLY A . n C 3 335 VAL 335 335 335 VAL VAL A . n C 3 336 ARG 336 336 336 ARG ARG A . n C 3 337 PHE 337 337 337 PHE PHE A . n C 3 338 SER 338 338 338 SER SER A . n C 3 339 LYS 339 339 339 LYS LYS A . n C 3 340 PHE 340 340 340 PHE PHE A . n C 3 341 ILE 341 341 341 ILE ILE A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 MG 1 405 405 MG MG B . E 4 MG 1 402 402 MG MG A . F 5 CA 1 403 403 CA CA A . G 4 MG 1 404 404 MG MG A . H 4 MG 1 406 406 MG MG A . I 6 POP 1 401 401 POP POP A . J 7 HOH 1 10 10 HOH HOH B . J 7 HOH 2 28 28 HOH HOH B . J 7 HOH 3 36 36 HOH HOH B . J 7 HOH 4 42 42 HOH HOH B . J 7 HOH 5 48 48 HOH HOH B . J 7 HOH 6 68 68 HOH HOH B . J 7 HOH 7 76 76 HOH HOH B . J 7 HOH 8 111 111 HOH HOH B . J 7 HOH 9 132 132 HOH HOH B . K 7 HOH 1 3 3 HOH HOH C . K 7 HOH 2 9 9 HOH HOH C . K 7 HOH 3 11 11 HOH HOH C . K 7 HOH 4 15 15 HOH HOH C . K 7 HOH 5 17 17 HOH HOH C . K 7 HOH 6 37 37 HOH HOH C . K 7 HOH 7 38 38 HOH HOH C . K 7 HOH 8 40 40 HOH HOH C . K 7 HOH 9 51 51 HOH HOH C . K 7 HOH 10 62 62 HOH HOH C . K 7 HOH 11 70 70 HOH HOH C . K 7 HOH 12 73 73 HOH HOH C . K 7 HOH 13 79 79 HOH HOH C . K 7 HOH 14 90 90 HOH HOH C . K 7 HOH 15 93 93 HOH HOH C . K 7 HOH 16 97 97 HOH HOH C . K 7 HOH 17 100 100 HOH HOH C . K 7 HOH 18 105 105 HOH HOH C . K 7 HOH 19 113 113 HOH HOH C . K 7 HOH 20 115 115 HOH HOH C . K 7 HOH 21 129 129 HOH HOH C . K 7 HOH 22 134 134 HOH HOH C . K 7 HOH 23 137 137 HOH HOH C . K 7 HOH 24 143 143 HOH HOH C . K 7 HOH 25 147 147 HOH HOH C . K 7 HOH 26 162 162 HOH HOH C . L 7 HOH 1 407 1 HOH HOH A . L 7 HOH 2 408 2 HOH HOH A . L 7 HOH 3 409 4 HOH HOH A . L 7 HOH 4 410 5 HOH HOH A . L 7 HOH 5 411 6 HOH HOH A . L 7 HOH 6 412 7 HOH HOH A . L 7 HOH 7 413 8 HOH HOH A . L 7 HOH 8 414 12 HOH HOH A . L 7 HOH 9 415 13 HOH HOH A . L 7 HOH 10 416 14 HOH HOH A . L 7 HOH 11 417 16 HOH HOH A . L 7 HOH 12 418 18 HOH HOH A . L 7 HOH 13 419 19 HOH HOH A . L 7 HOH 14 420 20 HOH HOH A . L 7 HOH 15 421 21 HOH HOH A . L 7 HOH 16 422 22 HOH HOH A . L 7 HOH 17 423 23 HOH HOH A . L 7 HOH 18 424 24 HOH HOH A . L 7 HOH 19 425 25 HOH HOH A . L 7 HOH 20 426 26 HOH HOH A . L 7 HOH 21 427 27 HOH HOH A . L 7 HOH 22 428 30 HOH HOH A . L 7 HOH 23 429 31 HOH HOH A . L 7 HOH 24 430 32 HOH HOH A . L 7 HOH 25 431 33 HOH HOH A . L 7 HOH 26 432 34 HOH HOH A . L 7 HOH 27 433 35 HOH HOH A . L 7 HOH 28 434 39 HOH HOH A . L 7 HOH 29 435 41 HOH HOH A . L 7 HOH 30 436 43 HOH HOH A . L 7 HOH 31 437 44 HOH HOH A . L 7 HOH 32 438 45 HOH HOH A . L 7 HOH 33 439 46 HOH HOH A . L 7 HOH 34 440 47 HOH HOH A . L 7 HOH 35 441 49 HOH HOH A . L 7 HOH 36 442 50 HOH HOH A . L 7 HOH 37 443 52 HOH HOH A . L 7 HOH 38 444 53 HOH HOH A . L 7 HOH 39 445 63 HOH HOH A . L 7 HOH 40 446 64 HOH HOH A . L 7 HOH 41 447 69 HOH HOH A . L 7 HOH 42 448 61 HOH HOH A . L 7 HOH 43 449 71 HOH HOH A . L 7 HOH 44 450 72 HOH HOH A . L 7 HOH 45 451 74 HOH HOH A . L 7 HOH 46 452 75 HOH HOH A . L 7 HOH 47 453 77 HOH HOH A . L 7 HOH 48 454 78 HOH HOH A . L 7 HOH 49 455 80 HOH HOH A . L 7 HOH 50 456 81 HOH HOH A . L 7 HOH 51 457 82 HOH HOH A . L 7 HOH 52 458 83 HOH HOH A . L 7 HOH 53 459 84 HOH HOH A . L 7 HOH 54 460 85 HOH HOH A . L 7 HOH 55 461 86 HOH HOH A . L 7 HOH 56 462 87 HOH HOH A . L 7 HOH 57 463 88 HOH HOH A . L 7 HOH 58 464 89 HOH HOH A . L 7 HOH 59 465 91 HOH HOH A . L 7 HOH 60 466 92 HOH HOH A . L 7 HOH 61 467 94 HOH HOH A . L 7 HOH 62 468 95 HOH HOH A . L 7 HOH 63 469 96 HOH HOH A . L 7 HOH 64 470 98 HOH HOH A . L 7 HOH 65 471 99 HOH HOH A . L 7 HOH 66 472 101 HOH HOH A . L 7 HOH 67 473 102 HOH HOH A . L 7 HOH 68 474 103 HOH HOH A . L 7 HOH 69 475 104 HOH HOH A . L 7 HOH 70 476 106 HOH HOH A . L 7 HOH 71 477 107 HOH HOH A . L 7 HOH 72 478 108 HOH HOH A . L 7 HOH 73 479 109 HOH HOH A . L 7 HOH 74 480 110 HOH HOH A . L 7 HOH 75 481 112 HOH HOH A . L 7 HOH 76 482 114 HOH HOH A . L 7 HOH 77 483 116 HOH HOH A . L 7 HOH 78 484 117 HOH HOH A . L 7 HOH 79 485 118 HOH HOH A . L 7 HOH 80 486 119 HOH HOH A . L 7 HOH 81 487 120 HOH HOH A . L 7 HOH 82 488 121 HOH HOH A . L 7 HOH 83 489 122 HOH HOH A . L 7 HOH 84 490 123 HOH HOH A . L 7 HOH 85 491 124 HOH HOH A . L 7 HOH 86 492 125 HOH HOH A . L 7 HOH 87 493 126 HOH HOH A . L 7 HOH 88 494 127 HOH HOH A . L 7 HOH 89 495 128 HOH HOH A . L 7 HOH 90 496 130 HOH HOH A . L 7 HOH 91 497 131 HOH HOH A . L 7 HOH 92 498 133 HOH HOH A . L 7 HOH 93 499 135 HOH HOH A . L 7 HOH 94 500 136 HOH HOH A . L 7 HOH 95 501 138 HOH HOH A . L 7 HOH 96 502 139 HOH HOH A . L 7 HOH 97 503 140 HOH HOH A . L 7 HOH 98 504 141 HOH HOH A . L 7 HOH 99 505 142 HOH HOH A . L 7 HOH 100 506 144 HOH HOH A . L 7 HOH 101 507 145 HOH HOH A . L 7 HOH 102 508 146 HOH HOH A . L 7 HOH 103 509 148 HOH HOH A . L 7 HOH 104 510 149 HOH HOH A . L 7 HOH 105 511 150 HOH HOH A . L 7 HOH 106 512 151 HOH HOH A . L 7 HOH 107 513 152 HOH HOH A . L 7 HOH 108 514 153 HOH HOH A . L 7 HOH 109 515 154 HOH HOH A . L 7 HOH 110 516 155 HOH HOH A . L 7 HOH 111 517 156 HOH HOH A . L 7 HOH 112 518 157 HOH HOH A . L 7 HOH 113 519 158 HOH HOH A . L 7 HOH 114 520 159 HOH HOH A . L 7 HOH 115 521 160 HOH HOH A . L 7 HOH 116 522 161 HOH HOH A . L 7 HOH 117 523 163 HOH HOH A . L 7 HOH 118 524 164 HOH HOH A . L 7 HOH 119 525 165 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? K HOH . ? C HOH 70 ? 1_555 MG ? D MG . ? B MG 405 ? 1_555 O ? K HOH . ? C HOH 93 ? 1_555 128.3 ? 2 OP1 ? A DG 14 ? B DG 1814 ? 1_555 MG ? E MG . ? A MG 402 ? 1_555 "O5'" ? A DG 14 ? B DG 1814 ? 1_555 53.0 ? 3 OP1 ? A DG 14 ? B DG 1814 ? 1_555 MG ? E MG . ? A MG 402 ? 1_555 OD1 ? C ASP 105 ? A ASP 105 ? 1_555 158.6 ? 4 "O5'" ? A DG 14 ? B DG 1814 ? 1_555 MG ? E MG . ? A MG 402 ? 1_555 OD1 ? C ASP 105 ? A ASP 105 ? 1_555 145.3 ? 5 OP1 ? A DG 14 ? B DG 1814 ? 1_555 MG ? E MG . ? A MG 402 ? 1_555 O2 ? I POP . ? A POP 401 ? 1_555 98.6 ? 6 "O5'" ? A DG 14 ? B DG 1814 ? 1_555 MG ? E MG . ? A MG 402 ? 1_555 O2 ? I POP . ? A POP 401 ? 1_555 63.5 ? 7 OD1 ? C ASP 105 ? A ASP 105 ? 1_555 MG ? E MG . ? A MG 402 ? 1_555 O2 ? I POP . ? A POP 401 ? 1_555 101.4 ? 8 OP1 ? A DG 14 ? B DG 1814 ? 1_555 MG ? E MG . ? A MG 402 ? 1_555 O1 ? I POP . ? A POP 401 ? 1_555 81.7 ? 9 "O5'" ? A DG 14 ? B DG 1814 ? 1_555 MG ? E MG . ? A MG 402 ? 1_555 O1 ? I POP . ? A POP 401 ? 1_555 96.4 ? 10 OD1 ? C ASP 105 ? A ASP 105 ? 1_555 MG ? E MG . ? A MG 402 ? 1_555 O1 ? I POP . ? A POP 401 ? 1_555 102.0 ? 11 O2 ? I POP . ? A POP 401 ? 1_555 MG ? E MG . ? A MG 402 ? 1_555 O1 ? I POP . ? A POP 401 ? 1_555 59.6 ? 12 OP1 ? A DG 14 ? B DG 1814 ? 1_555 MG ? E MG . ? A MG 402 ? 1_555 O ? L HOH . ? A HOH 416 ? 1_555 96.6 ? 13 "O5'" ? A DG 14 ? B DG 1814 ? 1_555 MG ? E MG . ? A MG 402 ? 1_555 O ? L HOH . ? A HOH 416 ? 1_555 144.2 ? 14 OD1 ? C ASP 105 ? A ASP 105 ? 1_555 MG ? E MG . ? A MG 402 ? 1_555 O ? L HOH . ? A HOH 416 ? 1_555 69.3 ? 15 O2 ? I POP . ? A POP 401 ? 1_555 MG ? E MG . ? A MG 402 ? 1_555 O ? L HOH . ? A HOH 416 ? 1_555 110.7 ? 16 O1 ? I POP . ? A POP 401 ? 1_555 MG ? E MG . ? A MG 402 ? 1_555 O ? L HOH . ? A HOH 416 ? 1_555 56.6 ? 17 OD1 ? C ASP 7 ? A ASP 7 ? 1_555 CA ? F CA . ? A CA 403 ? 1_555 O ? C PHE 8 ? A PHE 8 ? 1_555 88.0 ? 18 OD1 ? C ASP 7 ? A ASP 7 ? 1_555 CA ? F CA . ? A CA 403 ? 1_555 OD2 ? C ASP 105 ? A ASP 105 ? 1_555 101.2 ? 19 O ? C PHE 8 ? A PHE 8 ? 1_555 CA ? F CA . ? A CA 403 ? 1_555 OD2 ? C ASP 105 ? A ASP 105 ? 1_555 103.2 ? 20 OD1 ? C ASP 7 ? A ASP 7 ? 1_555 CA ? F CA . ? A CA 403 ? 1_555 O1 ? I POP . ? A POP 401 ? 1_555 81.1 ? 21 O ? C PHE 8 ? A PHE 8 ? 1_555 CA ? F CA . ? A CA 403 ? 1_555 O1 ? I POP . ? A POP 401 ? 1_555 168.5 ? 22 OD2 ? C ASP 105 ? A ASP 105 ? 1_555 CA ? F CA . ? A CA 403 ? 1_555 O1 ? I POP . ? A POP 401 ? 1_555 75.4 ? 23 OD1 ? C ASP 7 ? A ASP 7 ? 1_555 CA ? F CA . ? A CA 403 ? 1_555 O ? I POP . ? A POP 401 ? 1_555 123.7 ? 24 O ? C PHE 8 ? A PHE 8 ? 1_555 CA ? F CA . ? A CA 403 ? 1_555 O ? I POP . ? A POP 401 ? 1_555 139.1 ? 25 OD2 ? C ASP 105 ? A ASP 105 ? 1_555 CA ? F CA . ? A CA 403 ? 1_555 O ? I POP . ? A POP 401 ? 1_555 95.6 ? 26 O1 ? I POP . ? A POP 401 ? 1_555 CA ? F CA . ? A CA 403 ? 1_555 O ? I POP . ? A POP 401 ? 1_555 52.0 ? 27 OD1 ? C ASP 7 ? A ASP 7 ? 1_555 CA ? F CA . ? A CA 403 ? 1_555 O4 ? I POP . ? A POP 401 ? 1_555 166.3 ? 28 O ? C PHE 8 ? A PHE 8 ? 1_555 CA ? F CA . ? A CA 403 ? 1_555 O4 ? I POP . ? A POP 401 ? 1_555 82.8 ? 29 OD2 ? C ASP 105 ? A ASP 105 ? 1_555 CA ? F CA . ? A CA 403 ? 1_555 O4 ? I POP . ? A POP 401 ? 1_555 90.9 ? 30 O1 ? I POP . ? A POP 401 ? 1_555 CA ? F CA . ? A CA 403 ? 1_555 O4 ? I POP . ? A POP 401 ? 1_555 108.5 ? 31 O ? I POP . ? A POP 401 ? 1_555 CA ? F CA . ? A CA 403 ? 1_555 O4 ? I POP . ? A POP 401 ? 1_555 60.6 ? 32 O ? C ALA 181 ? A ALA 181 ? 1_555 MG ? G MG . ? A MG 404 ? 1_555 O ? C ILE 186 ? A ILE 186 ? 1_555 84.8 ? 33 O ? C ALA 181 ? A ALA 181 ? 1_555 MG ? G MG . ? A MG 404 ? 1_555 O ? L HOH . ? A HOH 431 ? 1_555 101.7 ? 34 O ? C ILE 186 ? A ILE 186 ? 1_555 MG ? G MG . ? A MG 404 ? 1_555 O ? L HOH . ? A HOH 431 ? 1_555 63.0 ? 35 O ? C ALA 181 ? A ALA 181 ? 1_555 MG ? G MG . ? A MG 404 ? 1_555 O ? L HOH . ? A HOH 446 ? 1_555 99.2 ? 36 O ? C ILE 186 ? A ILE 186 ? 1_555 MG ? G MG . ? A MG 404 ? 1_555 O ? L HOH . ? A HOH 446 ? 1_555 85.1 ? 37 O ? L HOH . ? A HOH 431 ? 1_555 MG ? G MG . ? A MG 404 ? 1_555 O ? L HOH . ? A HOH 446 ? 1_555 139.5 ? 38 O ? C ALA 181 ? A ALA 181 ? 1_555 MG ? G MG . ? A MG 404 ? 1_555 O ? L HOH . ? A HOH 475 ? 1_555 85.3 ? 39 O ? C ILE 186 ? A ILE 186 ? 1_555 MG ? G MG . ? A MG 404 ? 1_555 O ? L HOH . ? A HOH 475 ? 1_555 154.2 ? 40 O ? L HOH . ? A HOH 431 ? 1_555 MG ? G MG . ? A MG 404 ? 1_555 O ? L HOH . ? A HOH 475 ? 1_555 142.5 ? 41 O ? L HOH . ? A HOH 446 ? 1_555 MG ? G MG . ? A MG 404 ? 1_555 O ? L HOH . ? A HOH 475 ? 1_555 73.1 ? 42 OD1 ? C ASP 294 ? A ASP 294 ? 1_555 MG ? H MG . ? A MG 406 ? 1_555 OD2 ? C ASP 294 ? A ASP 294 ? 1_555 47.8 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-09-06 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-08-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' pdbx_struct_conn_angle 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_comp_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_atom_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_comp_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 21 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 22 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 23 4 'Structure model' '_pdbx_struct_conn_angle.value' 24 4 'Structure model' '_struct_conn.pdbx_dist_value' 25 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 26 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 27 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 28 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 29 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 30 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 31 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 32 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 33 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 34 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 35 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 36 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 37 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 38 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 39 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 40 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 41 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal CNS . ? package 'Axel T. Brunger' axel.brunger@yale.edu refinement http://cns.csb.yale.edu/v1.1/ Fortran_77 ? 1 PDB_EXTRACT 1.700 'May. 30, 2005' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 2 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" B DG 1805 ? ? "C1'" B DG 1805 ? ? N9 B DG 1805 ? ? 110.26 108.30 1.96 0.30 N 2 1 "O4'" B DA 1806 ? ? "C1'" B DA 1806 ? ? N9 B DA 1806 ? ? 111.20 108.30 2.90 0.30 N 3 1 "O3'" B DA 1806 ? ? P B DA 1807 ? ? OP2 B DA 1807 ? ? 119.68 110.50 9.18 1.10 Y 4 1 "O5'" B DC 1813 ? ? P B DC 1813 ? ? OP1 B DC 1813 ? ? 119.11 110.70 8.41 1.20 N 5 1 "O3'" C DT 1902 ? ? P C DT 1903 ? ? OP2 C DT 1903 ? ? 136.03 110.50 25.53 1.10 Y 6 1 "O5'" C DT 1903 ? ? P C DT 1903 ? ? OP1 C DT 1903 ? ? 121.97 110.70 11.27 1.20 N 7 1 "O5'" C DT 1903 ? ? P C DT 1903 ? ? OP2 C DT 1903 ? ? 84.74 105.70 -20.96 0.90 N 8 1 "C5'" C DT 1903 ? ? "C4'" C DT 1903 ? ? "C3'" C DT 1903 ? ? 98.21 114.10 -15.89 1.80 N 9 1 "C5'" C DT 1903 ? ? "C4'" C DT 1903 ? ? "O4'" C DT 1903 ? ? 119.60 109.80 9.80 1.10 N 10 1 "O4'" C DT 1903 ? ? "C1'" C DT 1903 ? ? N1 C DT 1903 ? ? 110.24 108.30 1.94 0.30 N 11 1 "O4'" C DG 1906 ? ? "C1'" C DG 1906 ? ? N9 C DG 1906 ? ? 103.74 108.00 -4.26 0.70 N 12 1 "O4'" C DT 1912 ? ? "C1'" C DT 1912 ? ? N1 C DT 1912 ? ? 110.38 108.30 2.08 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 10 ? ? 26.02 49.10 2 1 SER A 22 ? ? -60.57 19.25 3 1 GLU A 38 ? ? -32.60 114.58 4 1 PRO A 69 ? ? -59.52 -6.95 5 1 ARG A 77 ? ? -111.94 62.19 6 1 SER A 96 ? ? 172.41 129.76 7 1 ILE A 111 ? ? -110.23 52.30 8 1 SER A 145 ? ? 179.16 -162.06 9 1 LYS A 159 ? ? -38.37 145.18 10 1 ASN A 161 ? ? 47.25 20.50 11 1 ASP A 204 ? ? -39.12 -31.79 12 1 ARG A 256 ? ? -150.90 24.58 13 1 ASP A 277 ? ? 37.89 84.79 14 1 LYS A 278 ? ? 73.59 -8.65 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DG B 1803 ? ? 0.057 'SIDE CHAIN' 2 1 DG B 1805 ? ? 0.053 'SIDE CHAIN' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CA CA CA N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 DA OP3 O N N 89 DA P P N N 90 DA OP1 O N N 91 DA OP2 O N N 92 DA "O5'" O N N 93 DA "C5'" C N N 94 DA "C4'" C N R 95 DA "O4'" O N N 96 DA "C3'" C N S 97 DA "O3'" O N N 98 DA "C2'" C N N 99 DA "C1'" C N R 100 DA N9 N Y N 101 DA C8 C Y N 102 DA N7 N Y N 103 DA C5 C Y N 104 DA C6 C Y N 105 DA N6 N N N 106 DA N1 N Y N 107 DA C2 C Y N 108 DA N3 N Y N 109 DA C4 C Y N 110 DA HOP3 H N N 111 DA HOP2 H N N 112 DA "H5'" H N N 113 DA "H5''" H N N 114 DA "H4'" H N N 115 DA "H3'" H N N 116 DA "HO3'" H N N 117 DA "H2'" H N N 118 DA "H2''" H N N 119 DA "H1'" H N N 120 DA H8 H N N 121 DA H61 H N N 122 DA H62 H N N 123 DA H2 H N N 124 DC OP3 O N N 125 DC P P N N 126 DC OP1 O N N 127 DC OP2 O N N 128 DC "O5'" O N N 129 DC "C5'" C N N 130 DC "C4'" C N R 131 DC "O4'" O N N 132 DC "C3'" C N S 133 DC "O3'" O N N 134 DC "C2'" C N N 135 DC "C1'" C N R 136 DC N1 N N N 137 DC C2 C N N 138 DC O2 O N N 139 DC N3 N N N 140 DC C4 C N N 141 DC N4 N N N 142 DC C5 C N N 143 DC C6 C N N 144 DC HOP3 H N N 145 DC HOP2 H N N 146 DC "H5'" H N N 147 DC "H5''" H N N 148 DC "H4'" H N N 149 DC "H3'" H N N 150 DC "HO3'" H N N 151 DC "H2'" H N N 152 DC "H2''" H N N 153 DC "H1'" H N N 154 DC H41 H N N 155 DC H42 H N N 156 DC H5 H N N 157 DC H6 H N N 158 DG OP3 O N N 159 DG P P N N 160 DG OP1 O N N 161 DG OP2 O N N 162 DG "O5'" O N N 163 DG "C5'" C N N 164 DG "C4'" C N R 165 DG "O4'" O N N 166 DG "C3'" C N S 167 DG "O3'" O N N 168 DG "C2'" C N N 169 DG "C1'" C N R 170 DG N9 N Y N 171 DG C8 C Y N 172 DG N7 N Y N 173 DG C5 C Y N 174 DG C6 C N N 175 DG O6 O N N 176 DG N1 N N N 177 DG C2 C N N 178 DG N2 N N N 179 DG N3 N N N 180 DG C4 C Y N 181 DG HOP3 H N N 182 DG HOP2 H N N 183 DG "H5'" H N N 184 DG "H5''" H N N 185 DG "H4'" H N N 186 DG "H3'" H N N 187 DG "HO3'" H N N 188 DG "H2'" H N N 189 DG "H2''" H N N 190 DG "H1'" H N N 191 DG H8 H N N 192 DG H1 H N N 193 DG H21 H N N 194 DG H22 H N N 195 DT OP3 O N N 196 DT P P N N 197 DT OP1 O N N 198 DT OP2 O N N 199 DT "O5'" O N N 200 DT "C5'" C N N 201 DT "C4'" C N R 202 DT "O4'" O N N 203 DT "C3'" C N S 204 DT "O3'" O N N 205 DT "C2'" C N N 206 DT "C1'" C N R 207 DT N1 N N N 208 DT C2 C N N 209 DT O2 O N N 210 DT N3 N N N 211 DT C4 C N N 212 DT O4 O N N 213 DT C5 C N N 214 DT C7 C N N 215 DT C6 C N N 216 DT HOP3 H N N 217 DT HOP2 H N N 218 DT "H5'" H N N 219 DT "H5''" H N N 220 DT "H4'" H N N 221 DT "H3'" H N N 222 DT "HO3'" H N N 223 DT "H2'" H N N 224 DT "H2''" H N N 225 DT "H1'" H N N 226 DT H3 H N N 227 DT H71 H N N 228 DT H72 H N N 229 DT H73 H N N 230 DT H6 H N N 231 GLN N N N N 232 GLN CA C N S 233 GLN C C N N 234 GLN O O N N 235 GLN CB C N N 236 GLN CG C N N 237 GLN CD C N N 238 GLN OE1 O N N 239 GLN NE2 N N N 240 GLN OXT O N N 241 GLN H H N N 242 GLN H2 H N N 243 GLN HA H N N 244 GLN HB2 H N N 245 GLN HB3 H N N 246 GLN HG2 H N N 247 GLN HG3 H N N 248 GLN HE21 H N N 249 GLN HE22 H N N 250 GLN HXT H N N 251 GLU N N N N 252 GLU CA C N S 253 GLU C C N N 254 GLU O O N N 255 GLU CB C N N 256 GLU CG C N N 257 GLU CD C N N 258 GLU OE1 O N N 259 GLU OE2 O N N 260 GLU OXT O N N 261 GLU H H N N 262 GLU H2 H N N 263 GLU HA H N N 264 GLU HB2 H N N 265 GLU HB3 H N N 266 GLU HG2 H N N 267 GLU HG3 H N N 268 GLU HE2 H N N 269 GLU HXT H N N 270 GLY N N N N 271 GLY CA C N N 272 GLY C C N N 273 GLY O O N N 274 GLY OXT O N N 275 GLY H H N N 276 GLY H2 H N N 277 GLY HA2 H N N 278 GLY HA3 H N N 279 GLY HXT H N N 280 HIS N N N N 281 HIS CA C N S 282 HIS C C N N 283 HIS O O N N 284 HIS CB C N N 285 HIS CG C Y N 286 HIS ND1 N Y N 287 HIS CD2 C Y N 288 HIS CE1 C Y N 289 HIS NE2 N Y N 290 HIS OXT O N N 291 HIS H H N N 292 HIS H2 H N N 293 HIS HA H N N 294 HIS HB2 H N N 295 HIS HB3 H N N 296 HIS HD1 H N N 297 HIS HD2 H N N 298 HIS HE1 H N N 299 HIS HE2 H N N 300 HIS HXT H N N 301 HOH O O N N 302 HOH H1 H N N 303 HOH H2 H N N 304 ILE N N N N 305 ILE CA C N S 306 ILE C C N N 307 ILE O O N N 308 ILE CB C N S 309 ILE CG1 C N N 310 ILE CG2 C N N 311 ILE CD1 C N N 312 ILE OXT O N N 313 ILE H H N N 314 ILE H2 H N N 315 ILE HA H N N 316 ILE HB H N N 317 ILE HG12 H N N 318 ILE HG13 H N N 319 ILE HG21 H N N 320 ILE HG22 H N N 321 ILE HG23 H N N 322 ILE HD11 H N N 323 ILE HD12 H N N 324 ILE HD13 H N N 325 ILE HXT H N N 326 LEU N N N N 327 LEU CA C N S 328 LEU C C N N 329 LEU O O N N 330 LEU CB C N N 331 LEU CG C N N 332 LEU CD1 C N N 333 LEU CD2 C N N 334 LEU OXT O N N 335 LEU H H N N 336 LEU H2 H N N 337 LEU HA H N N 338 LEU HB2 H N N 339 LEU HB3 H N N 340 LEU HG H N N 341 LEU HD11 H N N 342 LEU HD12 H N N 343 LEU HD13 H N N 344 LEU HD21 H N N 345 LEU HD22 H N N 346 LEU HD23 H N N 347 LEU HXT H N N 348 LYS N N N N 349 LYS CA C N S 350 LYS C C N N 351 LYS O O N N 352 LYS CB C N N 353 LYS CG C N N 354 LYS CD C N N 355 LYS CE C N N 356 LYS NZ N N N 357 LYS OXT O N N 358 LYS H H N N 359 LYS H2 H N N 360 LYS HA H N N 361 LYS HB2 H N N 362 LYS HB3 H N N 363 LYS HG2 H N N 364 LYS HG3 H N N 365 LYS HD2 H N N 366 LYS HD3 H N N 367 LYS HE2 H N N 368 LYS HE3 H N N 369 LYS HZ1 H N N 370 LYS HZ2 H N N 371 LYS HZ3 H N N 372 LYS HXT H N N 373 MET N N N N 374 MET CA C N S 375 MET C C N N 376 MET O O N N 377 MET CB C N N 378 MET CG C N N 379 MET SD S N N 380 MET CE C N N 381 MET OXT O N N 382 MET H H N N 383 MET H2 H N N 384 MET HA H N N 385 MET HB2 H N N 386 MET HB3 H N N 387 MET HG2 H N N 388 MET HG3 H N N 389 MET HE1 H N N 390 MET HE2 H N N 391 MET HE3 H N N 392 MET HXT H N N 393 MG MG MG N N 394 PHE N N N N 395 PHE CA C N S 396 PHE C C N N 397 PHE O O N N 398 PHE CB C N N 399 PHE CG C Y N 400 PHE CD1 C Y N 401 PHE CD2 C Y N 402 PHE CE1 C Y N 403 PHE CE2 C Y N 404 PHE CZ C Y N 405 PHE OXT O N N 406 PHE H H N N 407 PHE H2 H N N 408 PHE HA H N N 409 PHE HB2 H N N 410 PHE HB3 H N N 411 PHE HD1 H N N 412 PHE HD2 H N N 413 PHE HE1 H N N 414 PHE HE2 H N N 415 PHE HZ H N N 416 PHE HXT H N N 417 POP P1 P N N 418 POP O1 O N N 419 POP O2 O N N 420 POP O3 O N N 421 POP O O N N 422 POP P2 P N N 423 POP O4 O N N 424 POP O5 O N N 425 POP O6 O N N 426 POP HO2 H N N 427 POP HO5 H N N 428 PRO N N N N 429 PRO CA C N S 430 PRO C C N N 431 PRO O O N N 432 PRO CB C N N 433 PRO CG C N N 434 PRO CD C N N 435 PRO OXT O N N 436 PRO H H N N 437 PRO HA H N N 438 PRO HB2 H N N 439 PRO HB3 H N N 440 PRO HG2 H N N 441 PRO HG3 H N N 442 PRO HD2 H N N 443 PRO HD3 H N N 444 PRO HXT H N N 445 SER N N N N 446 SER CA C N S 447 SER C C N N 448 SER O O N N 449 SER CB C N N 450 SER OG O N N 451 SER OXT O N N 452 SER H H N N 453 SER H2 H N N 454 SER HA H N N 455 SER HB2 H N N 456 SER HB3 H N N 457 SER HG H N N 458 SER HXT H N N 459 THR N N N N 460 THR CA C N S 461 THR C C N N 462 THR O O N N 463 THR CB C N R 464 THR OG1 O N N 465 THR CG2 C N N 466 THR OXT O N N 467 THR H H N N 468 THR H2 H N N 469 THR HA H N N 470 THR HB H N N 471 THR HG1 H N N 472 THR HG21 H N N 473 THR HG22 H N N 474 THR HG23 H N N 475 THR HXT H N N 476 TYR N N N N 477 TYR CA C N S 478 TYR C C N N 479 TYR O O N N 480 TYR CB C N N 481 TYR CG C Y N 482 TYR CD1 C Y N 483 TYR CD2 C Y N 484 TYR CE1 C Y N 485 TYR CE2 C Y N 486 TYR CZ C Y N 487 TYR OH O N N 488 TYR OXT O N N 489 TYR H H N N 490 TYR H2 H N N 491 TYR HA H N N 492 TYR HB2 H N N 493 TYR HB3 H N N 494 TYR HD1 H N N 495 TYR HD2 H N N 496 TYR HE1 H N N 497 TYR HE2 H N N 498 TYR HH H N N 499 TYR HXT H N N 500 VAL N N N N 501 VAL CA C N S 502 VAL C C N N 503 VAL O O N N 504 VAL CB C N N 505 VAL CG1 C N N 506 VAL CG2 C N N 507 VAL OXT O N N 508 VAL H H N N 509 VAL H2 H N N 510 VAL HA H N N 511 VAL HB H N N 512 VAL HG11 H N N 513 VAL HG12 H N N 514 VAL HG13 H N N 515 VAL HG21 H N N 516 VAL HG22 H N N 517 VAL HG23 H N N 518 VAL HXT H N N 519 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 HOH O H1 sing N N 299 HOH O H2 sing N N 300 ILE N CA sing N N 301 ILE N H sing N N 302 ILE N H2 sing N N 303 ILE CA C sing N N 304 ILE CA CB sing N N 305 ILE CA HA sing N N 306 ILE C O doub N N 307 ILE C OXT sing N N 308 ILE CB CG1 sing N N 309 ILE CB CG2 sing N N 310 ILE CB HB sing N N 311 ILE CG1 CD1 sing N N 312 ILE CG1 HG12 sing N N 313 ILE CG1 HG13 sing N N 314 ILE CG2 HG21 sing N N 315 ILE CG2 HG22 sing N N 316 ILE CG2 HG23 sing N N 317 ILE CD1 HD11 sing N N 318 ILE CD1 HD12 sing N N 319 ILE CD1 HD13 sing N N 320 ILE OXT HXT sing N N 321 LEU N CA sing N N 322 LEU N H sing N N 323 LEU N H2 sing N N 324 LEU CA C sing N N 325 LEU CA CB sing N N 326 LEU CA HA sing N N 327 LEU C O doub N N 328 LEU C OXT sing N N 329 LEU CB CG sing N N 330 LEU CB HB2 sing N N 331 LEU CB HB3 sing N N 332 LEU CG CD1 sing N N 333 LEU CG CD2 sing N N 334 LEU CG HG sing N N 335 LEU CD1 HD11 sing N N 336 LEU CD1 HD12 sing N N 337 LEU CD1 HD13 sing N N 338 LEU CD2 HD21 sing N N 339 LEU CD2 HD22 sing N N 340 LEU CD2 HD23 sing N N 341 LEU OXT HXT sing N N 342 LYS N CA sing N N 343 LYS N H sing N N 344 LYS N H2 sing N N 345 LYS CA C sing N N 346 LYS CA CB sing N N 347 LYS CA HA sing N N 348 LYS C O doub N N 349 LYS C OXT sing N N 350 LYS CB CG sing N N 351 LYS CB HB2 sing N N 352 LYS CB HB3 sing N N 353 LYS CG CD sing N N 354 LYS CG HG2 sing N N 355 LYS CG HG3 sing N N 356 LYS CD CE sing N N 357 LYS CD HD2 sing N N 358 LYS CD HD3 sing N N 359 LYS CE NZ sing N N 360 LYS CE HE2 sing N N 361 LYS CE HE3 sing N N 362 LYS NZ HZ1 sing N N 363 LYS NZ HZ2 sing N N 364 LYS NZ HZ3 sing N N 365 LYS OXT HXT sing N N 366 MET N CA sing N N 367 MET N H sing N N 368 MET N H2 sing N N 369 MET CA C sing N N 370 MET CA CB sing N N 371 MET CA HA sing N N 372 MET C O doub N N 373 MET C OXT sing N N 374 MET CB CG sing N N 375 MET CB HB2 sing N N 376 MET CB HB3 sing N N 377 MET CG SD sing N N 378 MET CG HG2 sing N N 379 MET CG HG3 sing N N 380 MET SD CE sing N N 381 MET CE HE1 sing N N 382 MET CE HE2 sing N N 383 MET CE HE3 sing N N 384 MET OXT HXT sing N N 385 PHE N CA sing N N 386 PHE N H sing N N 387 PHE N H2 sing N N 388 PHE CA C sing N N 389 PHE CA CB sing N N 390 PHE CA HA sing N N 391 PHE C O doub N N 392 PHE C OXT sing N N 393 PHE CB CG sing N N 394 PHE CB HB2 sing N N 395 PHE CB HB3 sing N N 396 PHE CG CD1 doub Y N 397 PHE CG CD2 sing Y N 398 PHE CD1 CE1 sing Y N 399 PHE CD1 HD1 sing N N 400 PHE CD2 CE2 doub Y N 401 PHE CD2 HD2 sing N N 402 PHE CE1 CZ doub Y N 403 PHE CE1 HE1 sing N N 404 PHE CE2 CZ sing Y N 405 PHE CE2 HE2 sing N N 406 PHE CZ HZ sing N N 407 PHE OXT HXT sing N N 408 POP P1 O1 doub N N 409 POP P1 O2 sing N N 410 POP P1 O3 sing N N 411 POP P1 O sing N N 412 POP O2 HO2 sing N N 413 POP O P2 sing N N 414 POP P2 O4 doub N N 415 POP P2 O5 sing N N 416 POP P2 O6 sing N N 417 POP O5 HO5 sing N N 418 PRO N CA sing N N 419 PRO N CD sing N N 420 PRO N H sing N N 421 PRO CA C sing N N 422 PRO CA CB sing N N 423 PRO CA HA sing N N 424 PRO C O doub N N 425 PRO C OXT sing N N 426 PRO CB CG sing N N 427 PRO CB HB2 sing N N 428 PRO CB HB3 sing N N 429 PRO CG CD sing N N 430 PRO CG HG2 sing N N 431 PRO CG HG3 sing N N 432 PRO CD HD2 sing N N 433 PRO CD HD3 sing N N 434 PRO OXT HXT sing N N 435 SER N CA sing N N 436 SER N H sing N N 437 SER N H2 sing N N 438 SER CA C sing N N 439 SER CA CB sing N N 440 SER CA HA sing N N 441 SER C O doub N N 442 SER C OXT sing N N 443 SER CB OG sing N N 444 SER CB HB2 sing N N 445 SER CB HB3 sing N N 446 SER OG HG sing N N 447 SER OXT HXT sing N N 448 THR N CA sing N N 449 THR N H sing N N 450 THR N H2 sing N N 451 THR CA C sing N N 452 THR CA CB sing N N 453 THR CA HA sing N N 454 THR C O doub N N 455 THR C OXT sing N N 456 THR CB OG1 sing N N 457 THR CB CG2 sing N N 458 THR CB HB sing N N 459 THR OG1 HG1 sing N N 460 THR CG2 HG21 sing N N 461 THR CG2 HG22 sing N N 462 THR CG2 HG23 sing N N 463 THR OXT HXT sing N N 464 TYR N CA sing N N 465 TYR N H sing N N 466 TYR N H2 sing N N 467 TYR CA C sing N N 468 TYR CA CB sing N N 469 TYR CA HA sing N N 470 TYR C O doub N N 471 TYR C OXT sing N N 472 TYR CB CG sing N N 473 TYR CB HB2 sing N N 474 TYR CB HB3 sing N N 475 TYR CG CD1 doub Y N 476 TYR CG CD2 sing Y N 477 TYR CD1 CE1 sing Y N 478 TYR CD1 HD1 sing N N 479 TYR CD2 CE2 doub Y N 480 TYR CD2 HD2 sing N N 481 TYR CE1 CZ doub Y N 482 TYR CE1 HE1 sing N N 483 TYR CE2 CZ sing Y N 484 TYR CE2 HE2 sing N N 485 TYR CZ OH sing N N 486 TYR OH HH sing N N 487 TYR OXT HXT sing N N 488 VAL N CA sing N N 489 VAL N H sing N N 490 VAL N H2 sing N N 491 VAL CA C sing N N 492 VAL CA CB sing N N 493 VAL CA HA sing N N 494 VAL C O doub N N 495 VAL C OXT sing N N 496 VAL CB CG1 sing N N 497 VAL CB CG2 sing N N 498 VAL CB HB sing N N 499 VAL CG1 HG11 sing N N 500 VAL CG1 HG12 sing N N 501 VAL CG1 HG13 sing N N 502 VAL CG2 HG21 sing N N 503 VAL CG2 HG22 sing N N 504 VAL CG2 HG23 sing N N 505 VAL OXT HXT sing N N 506 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2AGO 'double helix' 2AGO 'b-form double helix' 2AGO 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 1 1_555 B DC 17 1_555 -0.483 -0.149 -0.182 -5.460 -5.416 0.040 1 B_DG1801:DC1918_C B 1801 ? C 1918 ? 19 1 1 A DG 2 1_555 B DC 16 1_555 0.320 -0.097 -0.274 -3.003 -2.663 -4.790 2 B_DG1802:DC1917_C B 1802 ? C 1917 ? 19 1 1 A DG 3 1_555 B DC 15 1_555 -0.574 -0.324 -0.061 1.103 -6.915 -3.481 3 B_DG1803:DC1916_C B 1803 ? C 1916 ? 19 1 1 A DG 4 1_555 B DC 14 1_555 -0.164 -0.010 -0.015 4.968 -4.757 1.154 4 B_DG1804:DC1915_C B 1804 ? C 1915 ? 19 1 1 A DG 5 1_555 B DC 13 1_555 0.042 0.166 0.241 4.528 -3.650 0.864 5 B_DG1805:DC1914_C B 1805 ? C 1914 ? 19 1 1 A DA 6 1_555 B DT 12 1_555 -0.105 0.082 0.017 -0.860 -12.585 -5.846 6 B_DA1806:DT1913_C B 1806 ? C 1913 ? 20 1 1 A DA 7 1_555 B DT 11 1_555 0.004 -0.415 0.744 9.906 -11.340 -2.188 7 B_DA1807:DT1912_C B 1807 ? C 1912 ? 20 1 1 A DG 8 1_555 B DC 10 1_555 -0.163 -0.156 0.116 10.553 0.945 -0.607 8 B_DG1808:DC1911_C B 1808 ? C 1911 ? 19 1 1 A DG 9 1_555 B DC 9 1_555 -0.134 -0.244 0.346 8.760 -13.001 -1.822 9 B_DG1809:DC1910_C B 1809 ? C 1910 ? 19 1 1 A DA 10 1_555 B DT 8 1_555 -0.123 0.036 -0.058 -12.416 -11.174 4.943 10 B_DA1810:DT1909_C B 1810 ? C 1909 ? 20 1 1 A DT 11 1_555 B DA 7 1_555 0.221 0.168 -0.072 -1.425 0.160 -5.206 11 B_DT1811:DA1908_C B 1811 ? C 1908 ? 20 1 1 A DT 12 1_555 B DA 6 1_555 -0.297 0.298 -0.670 14.881 -11.245 0.249 12 B_DT1812:DA1907_C B 1812 ? C 1907 ? 20 1 1 A DC 13 1_555 B DG 5 1_555 0.453 -0.033 -0.777 9.681 -5.959 0.004 13 B_DC1813:DG1906_C B 1813 ? C 1906 ? 19 1 1 A DG 14 1_555 B DT 4 1_555 1.749 0.438 -0.672 -3.832 -16.072 29.193 14 B_DG1814:DT1905_C B 1814 ? C 1905 ? ? 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 1 1_555 B DC 17 1_555 A DG 2 1_555 B DC 16 1_555 0.523 -0.046 3.374 -0.180 6.143 33.834 -1.067 -0.914 3.312 10.447 0.307 34.372 1 BB_DG1801DG1802:DC1917DC1918_CC B 1801 ? C 1918 ? B 1802 ? C 1917 ? 1 A DG 2 1_555 B DC 16 1_555 A DG 3 1_555 B DC 15 1_555 -0.994 -0.220 3.141 -5.080 3.831 31.830 -1.054 0.905 3.209 6.899 9.149 32.444 2 BB_DG1802DG1803:DC1916DC1917_CC B 1802 ? C 1917 ? B 1803 ? C 1916 ? 1 A DG 3 1_555 B DC 15 1_555 A DG 4 1_555 B DC 14 1_555 1.067 0.139 3.230 0.382 6.298 32.077 -0.836 -1.831 3.210 11.261 -0.683 32.675 3 BB_DG1803DG1804:DC1915DC1916_CC B 1803 ? C 1916 ? B 1804 ? C 1915 ? 1 A DG 4 1_555 B DC 14 1_555 A DG 5 1_555 B DC 13 1_555 -0.023 -0.491 3.232 -2.507 6.781 29.912 -2.217 -0.434 3.041 12.902 4.769 30.754 4 BB_DG1804DG1805:DC1914DC1915_CC B 1804 ? C 1915 ? B 1805 ? C 1914 ? 1 A DG 5 1_555 B DC 13 1_555 A DA 6 1_555 B DT 12 1_555 -0.614 -0.173 3.355 -0.352 3.248 38.757 -0.664 0.878 3.335 4.884 0.529 38.889 5 BB_DG1805DA1806:DT1913DC1914_CC B 1805 ? C 1914 ? B 1806 ? C 1913 ? 1 A DA 6 1_555 B DT 12 1_555 A DA 7 1_555 B DT 11 1_555 0.208 -0.382 2.910 -2.241 -4.341 32.107 -0.002 -0.724 2.915 -7.792 4.022 32.467 6 BB_DA1806DA1807:DT1912DT1913_CC B 1806 ? C 1913 ? B 1807 ? C 1912 ? 1 A DA 7 1_555 B DT 11 1_555 A DG 8 1_555 B DC 10 1_555 0.094 -0.347 3.446 5.300 2.236 28.894 -1.185 1.008 3.373 4.425 -10.490 29.449 7 BB_DA1807DG1808:DC1911DT1912_CC B 1807 ? C 1912 ? B 1808 ? C 1911 ? 1 A DG 8 1_555 B DC 10 1_555 A DG 9 1_555 B DC 9 1_555 -0.296 0.103 3.391 -2.032 -1.844 39.489 0.376 0.190 3.394 -2.726 3.003 39.581 8 BB_DG1808DG1809:DC1910DC1911_CC B 1808 ? C 1911 ? B 1809 ? C 1910 ? 1 A DG 9 1_555 B DC 9 1_555 A DA 10 1_555 B DT 8 1_555 0.170 -0.690 3.793 3.364 -5.826 39.386 -0.220 0.207 3.854 -8.568 -4.947 39.934 9 BB_DG1809DA1810:DT1909DC1910_CC B 1809 ? C 1910 ? B 1810 ? C 1909 ? 1 A DA 10 1_555 B DT 8 1_555 A DT 11 1_555 B DA 7 1_555 -0.145 -0.525 3.128 0.196 -6.093 35.974 -0.021 0.257 3.171 -9.778 -0.315 36.470 10 BB_DA1810DT1811:DA1908DT1909_CC B 1810 ? C 1909 ? B 1811 ? C 1908 ? 1 A DT 11 1_555 B DA 7 1_555 A DT 12 1_555 B DA 6 1_555 -0.015 -0.692 2.846 2.900 4.399 25.404 -2.577 0.716 2.672 9.868 -6.506 25.936 11 BB_DT1811DT1812:DA1907DA1908_CC B 1811 ? C 1908 ? B 1812 ? C 1907 ? 1 A DT 12 1_555 B DA 6 1_555 A DC 13 1_555 B DG 5 1_555 0.643 -0.103 3.636 3.695 4.680 33.597 -1.008 -0.439 3.637 8.018 -6.331 34.107 12 BB_DT1812DC1813:DG1906DA1907_CC B 1812 ? C 1907 ? B 1813 ? C 1906 ? 1 A DC 13 1_555 B DG 5 1_555 A DG 14 1_555 B DT 4 1_555 1.242 -0.368 4.048 -3.086 5.360 25.228 -2.598 -3.788 3.715 12.043 6.933 25.963 13 BB_DC1813DG1814:DT1905DG1906_CC B 1813 ? C 1906 ? B 1814 ? C 1905 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'MAGNESIUM ION' MG 5 'CALCIUM ION' CA 6 'PYROPHOSPHATE 2-' POP 7 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1JX4 _pdbx_initial_refinement_model.details ? #