HEADER TRANSLATION 28-JUL-05 2AHO TITLE STRUCTURE OF THE ARCHAEAL INITIATION FACTOR EIF2 ALPHA-GAMMA TITLE 2 HETERODIMER FROM SULFOLOBUS SOLFATARICUS COMPLEXED WITH GDPNP COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSLATION INITIATION FACTOR 2 GAMMA SUBUNIT; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: EIF-2-GAMMA, AIF2- GAMMA; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: TRANSLATION INITIATION FACTOR 2 ALPHA SUBUNIT; COMPND 8 CHAIN: B; COMPND 9 SYNONYM: EIF-2-ALPHA, AIF2- ALPHA; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SULFOLOBUS SOLFATARICUS; SOURCE 3 ORGANISM_TAXID: 2287; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21 ROSETTA; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET3A; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: SULFOLOBUS SOLFATARICUS; SOURCE 11 ORGANISM_TAXID: 2287; SOURCE 12 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 14 EXPRESSION_SYSTEM_STRAIN: BL21 ROSETTA; SOURCE 15 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 16 EXPRESSION_SYSTEM_PLASMID: PET3A KEYWDS INITIATION OF TRANSLATION, TRANSLATION EXPDTA X-RAY DIFFRACTION AUTHOR L.YATIME,Y.MECHULAM,S.BLANQUET,E.SCHMITT REVDAT 4 25-OCT-23 2AHO 1 REMARK LINK REVDAT 3 11-OCT-17 2AHO 1 REMARK REVDAT 2 24-FEB-09 2AHO 1 VERSN REVDAT 1 31-JAN-06 2AHO 0 JRNL AUTH L.YATIME,Y.MECHULAM,S.BLANQUET,E.SCHMITT JRNL TITL STRUCTURAL SWITCH OF THE GAMMA SUBUNIT IN AN ARCHAEAL JRNL TITL 2 AIF2ALPHAGAMMA HETERODIMER JRNL REF STRUCTURE V. 14 119 2006 JRNL REFN ISSN 0969-2126 JRNL PMID 16407071 JRNL DOI 10.1016/J.STR.2005.09.020 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 12.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 92.6 REMARK 3 NUMBER OF REFLECTIONS : 16604 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.224 REMARK 3 FREE R VALUE : 0.291 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 967 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5177 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 34 REMARK 3 SOLVENT ATOMS : 42 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 64.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -15.39200 REMARK 3 B22 (A**2) : 12.15100 REMARK 3 B33 (A**2) : 3.24100 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.732 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : ANISOTROPIC REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2AHO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 02-AUG-05. REMARK 100 THE DEPOSITION ID IS D_1000033906. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-JAN-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.934 REMARK 200 MONOCHROMATOR : DIAMOND REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17816 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.07500 REMARK 200 R SYM (I) : 0.07500 REMARK 200 FOR THE DATA SET : 13.7700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.20 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.31400 REMARK 200 R SYM FOR SHELL (I) : 0.31400 REMARK 200 FOR SHELL : 3.850 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1KK0 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG6000, PH 7.0, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 297K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 19.80000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 97.05000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 56.45000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 97.05000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 19.80000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 56.45000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2790 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31170 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -63.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 36 REMARK 465 HIS A 37 REMARK 465 SER A 38 REMARK 465 GLU A 39 REMARK 465 GLU A 40 REMARK 465 LEU A 41 REMARK 465 LYS A 42 REMARK 465 ARG A 43 REMARK 465 GLU A 262 REMARK 465 LYS A 263 REMARK 465 GLN A 264 REMARK 465 GLY A 265 REMARK 465 LYS A 266 REMARK 465 SER B 48 REMARK 465 LYS B 49 REMARK 465 TRP B 50 REMARK 465 VAL B 51 REMARK 465 LYS B 52 REMARK 465 LYS B 265 REMARK 465 LYS B 266 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN B 258 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 80 N - CA - C ANGL. DEV. = 27.6 DEGREES REMARK 500 PRO A 271 C - N - CA ANGL. DEV. = 9.1 DEGREES REMARK 500 GLU B 212 N - CA - C ANGL. DEV. = 20.0 DEGREES REMARK 500 SER B 213 C - N - CA ANGL. DEV. = -19.4 DEGREES REMARK 500 SER B 213 N - CA - C ANGL. DEV. = 24.5 DEGREES REMARK 500 SER B 213 CA - C - N ANGL. DEV. = -26.4 DEGREES REMARK 500 SER B 213 O - C - N ANGL. DEV. = 10.3 DEGREES REMARK 500 LEU B 214 C - N - CA ANGL. DEV. = 15.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 66 -25.54 -26.97 REMARK 500 PRO A 72 68.63 -59.12 REMARK 500 LYS A 75 34.35 -68.62 REMARK 500 CYS A 77 90.08 -160.79 REMARK 500 ASP A 80 -34.81 -23.32 REMARK 500 PRO A 83 153.13 -40.11 REMARK 500 ARG A 87 163.15 178.61 REMARK 500 ASN A 121 40.47 -78.95 REMARK 500 PRO A 123 68.47 -52.45 REMARK 500 PHE A 124 -74.33 5.47 REMARK 500 PRO A 125 80.09 -65.41 REMARK 500 VAL A 141 72.69 -63.92 REMARK 500 ASN A 143 75.13 -66.36 REMARK 500 LYS A 150 39.84 -72.54 REMARK 500 ASP A 152 -3.28 -42.88 REMARK 500 ALA A 159 -6.54 -57.78 REMARK 500 THR A 170 23.67 -63.85 REMARK 500 LYS A 171 -98.40 -91.35 REMARK 500 THR A 173 -165.84 -59.36 REMARK 500 GLU A 176 -93.66 -57.78 REMARK 500 PHE A 230 -24.15 -38.68 REMARK 500 LEU A 246 136.22 -172.69 REMARK 500 ASP A 250 9.47 83.44 REMARK 500 ASP A 302 120.36 -37.51 REMARK 500 PRO A 303 -15.53 -49.29 REMARK 500 LYS A 307 -97.29 -112.68 REMARK 500 ALA A 308 -87.05 -38.60 REMARK 500 ASP A 309 22.22 -155.91 REMARK 500 ASN A 310 -49.14 -21.95 REMARK 500 VAL A 339 67.02 -105.40 REMARK 500 MET A 345 53.69 -69.40 REMARK 500 PRO A 350 160.01 -44.77 REMARK 500 ILE A 393 97.76 -23.69 REMARK 500 GLN A 400 41.71 -79.35 REMARK 500 ILE A 401 -62.39 -22.30 REMARK 500 LEU B 15 143.21 168.37 REMARK 500 GLU B 33 9.74 -61.05 REMARK 500 SER B 44 -15.18 -47.70 REMARK 500 LEU B 58 48.44 -68.31 REMARK 500 ASN B 61 10.31 -144.27 REMARK 500 ILE B 69 -81.25 -29.37 REMARK 500 ASP B 104 -73.15 -56.83 REMARK 500 LEU B 114 26.89 -76.17 REMARK 500 LYS B 115 41.29 32.56 REMARK 500 LEU B 116 -146.19 -109.75 REMARK 500 VAL B 125 -91.11 -72.96 REMARK 500 LYS B 132 93.20 -64.90 REMARK 500 TYR B 133 112.48 -21.91 REMARK 500 GLU B 146 -94.74 -79.18 REMARK 500 GLU B 148 20.17 -61.17 REMARK 500 REMARK 500 THIS ENTRY HAS 69 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR B 211 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 SER B 213 -10.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 913 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 23 OG1 REMARK 620 2 THR A 46 OG1 65.1 REMARK 620 3 HOH A 513 O 59.0 58.9 REMARK 620 4 GNP A 912 O2B 77.5 124.0 66.4 REMARK 620 5 GNP A 912 O2G 115.2 73.3 57.3 88.1 REMARK 620 6 GNP A 912 N3B 137.8 136.8 98.4 60.4 63.7 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 913 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 914 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GNP A 912 DBREF 2AHO A 2 415 UNP Q980A5 IF2G_SULSO 2 415 DBREF 2AHO B 1 266 UNP Q97Z79 IF2A_SULSO 1 266 SEQRES 1 A 414 ALA TRP PRO LYS VAL GLN PRO GLU VAL ASN ILE GLY VAL SEQRES 2 A 414 VAL GLY HIS VAL ASP HIS GLY LYS THR THR LEU VAL GLN SEQRES 3 A 414 ALA ILE THR GLY ILE TRP THR SER LYS HIS SER GLU GLU SEQRES 4 A 414 LEU LYS ARG GLY MET THR ILE LYS LEU GLY TYR ALA GLU SEQRES 5 A 414 THR ASN ILE GLY VAL CYS GLU SER CYS LYS LYS PRO GLU SEQRES 6 A 414 ALA TYR VAL THR GLU PRO SER CYS LYS SER CYS GLY SER SEQRES 7 A 414 ASP ASP GLU PRO LYS PHE LEU ARG ARG ILE SER PHE ILE SEQRES 8 A 414 ASP ALA PRO GLY HIS GLU VAL LEU MET ALA THR MET LEU SEQRES 9 A 414 SER GLY ALA ALA LEU MET ASP GLY ALA ILE LEU VAL VAL SEQRES 10 A 414 ALA ALA ASN GLU PRO PHE PRO GLN PRO GLN THR ARG GLU SEQRES 11 A 414 HIS PHE VAL ALA LEU GLY ILE ILE GLY VAL LYS ASN LEU SEQRES 12 A 414 ILE ILE VAL GLN ASN LYS VAL ASP VAL VAL SER LYS GLU SEQRES 13 A 414 GLU ALA LEU SER GLN TYR ARG GLN ILE LYS GLN PHE THR SEQRES 14 A 414 LYS GLY THR TRP ALA GLU ASN VAL PRO ILE ILE PRO VAL SEQRES 15 A 414 SER ALA LEU HIS LYS ILE ASN ILE ASP SER LEU ILE GLU SEQRES 16 A 414 GLY ILE GLU GLU TYR ILE LYS THR PRO TYR ARG ASP LEU SEQRES 17 A 414 SER GLN LYS PRO VAL MET LEU VAL ILE ARG SER PHE ASP SEQRES 18 A 414 VAL ASN LYS PRO GLY THR GLN PHE ASN GLU LEU LYS GLY SEQRES 19 A 414 GLY VAL ILE GLY GLY SER ILE ILE GLN GLY LEU PHE LYS SEQRES 20 A 414 VAL ASP GLN GLU ILE LYS VAL LEU PRO GLY LEU ARG VAL SEQRES 21 A 414 GLU LYS GLN GLY LYS VAL SER TYR GLU PRO ILE PHE THR SEQRES 22 A 414 LYS ILE SER SER ILE ARG PHE GLY ASP GLU GLU PHE LYS SEQRES 23 A 414 GLU ALA LYS PRO GLY GLY LEU VAL ALA ILE GLY THR TYR SEQRES 24 A 414 LEU ASP PRO SER LEU THR LYS ALA ASP ASN LEU LEU GLY SEQRES 25 A 414 SER ILE ILE THR LEU ALA ASP ALA GLU VAL PRO VAL LEU SEQRES 26 A 414 TRP ASN ILE ARG ILE LYS TYR ASN LEU LEU GLU ARG VAL SEQRES 27 A 414 VAL GLY ALA LYS GLU MET LEU LYS VAL ASP PRO ILE ARG SEQRES 28 A 414 ALA LYS GLU THR LEU MET LEU SER VAL GLY SER SER THR SEQRES 29 A 414 THR LEU GLY ILE VAL THR SER VAL LYS LYS ASP GLU ILE SEQRES 30 A 414 GLU VAL GLU LEU ARG ARG PRO VAL ALA VAL TRP SER ASN SEQRES 31 A 414 ASN ILE ARG THR VAL ILE SER ARG GLN ILE ALA GLY ARG SEQRES 32 A 414 TRP ARG MET ILE GLY TRP GLY LEU VAL GLU ILE SEQRES 1 B 266 MET ILE TYR SER ARG SER LYS LEU PRO SER GLU GLY GLU SEQRES 2 B 266 ILE LEU ILE ALA THR VAL LYS GLN VAL PHE ASP TYR GLY SEQRES 3 B 266 SER TYR VAL SER LEU ASP GLU TYR GLY GLY LEU GLN ALA SEQRES 4 B 266 PHE LEU PRO TRP SER GLU VAL SER SER LYS TRP VAL LYS SEQRES 5 B 266 ASN ILE ARG ASP VAL LEU LYS GLU ASN ARG LYS VAL ILE SEQRES 6 B 266 VAL LYS VAL ILE ARG VAL ASP ARG ARG LYS GLY THR VAL SEQRES 7 B 266 ASP VAL SER LEU LYS LYS VAL THR ASP ASP GLU ARG ARG SEQRES 8 B 266 LYS LYS ASN LEU GLN TRP LYS LYS ILE GLN ARG LEU ASP SEQRES 9 B 266 LYS ILE LEU GLU LEU VAL SER GLN LYS LEU LYS LEU SER SEQRES 10 B 266 GLU LYS ASP ALA TRP GLU GLN VAL ALA TRP LYS LEU GLU SEQRES 11 B 266 ALA LYS TYR GLY ASP PRO ILE THR ALA ILE GLU LYS ALA SEQRES 12 B 266 VAL LYS GLU GLY GLU LYS ILE LEU ILE ASP ALA GLY VAL SEQRES 13 B 266 PRO GLU ILE TRP VAL LYS PRO LEU LEU GLU GLU ALA SER SEQRES 14 B 266 LYS HIS ALA GLU GLU ARG LYS VAL LYS MET SER GLY LEU SEQRES 15 B 266 ILE THR VAL ARG THR ASN GLU PRO LEU GLY VAL GLU LYS SEQRES 16 B 266 ILE LYS GLU VAL ILE SER LYS ALA LEU GLU ASN ILE GLU SEQRES 17 B 266 GLN ASP TYR GLU SER LEU LEU ASN ILE LYS ILE TYR THR SEQRES 18 B 266 ILE GLY ALA PRO ARG TYR ARG VAL ASP VAL VAL GLY THR SEQRES 19 B 266 ASN PRO LYS GLU ALA SER GLU ALA LEU ASN GLN ILE ILE SEQRES 20 B 266 SER ASN LEU ILE LYS ILE GLY LYS GLU GLU ASN VAL ASP SEQRES 21 B 266 ILE SER VAL VAL LYS LYS HET MG A 913 1 HET ZN A 914 1 HET GNP A 912 32 HETNAM MG MAGNESIUM ION HETNAM ZN ZINC ION HETNAM GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER FORMUL 3 MG MG 2+ FORMUL 4 ZN ZN 2+ FORMUL 5 GNP C10 H17 N6 O13 P3 FORMUL 6 HOH *42(H2 O) HELIX 1 1 GLY A 21 GLY A 31 1 11 HELIX 2 2 HIS A 97 VAL A 99 5 3 HELIX 3 3 LEU A 100 ALA A 109 1 10 HELIX 4 4 GLN A 126 GLY A 140 1 15 HELIX 5 5 LYS A 150 VAL A 154 5 5 HELIX 6 6 GLU A 157 THR A 170 1 14 HELIX 7 7 ASN A 190 ILE A 202 1 13 HELIX 8 8 GLN A 229 LEU A 233 5 5 HELIX 9 9 PRO B 42 VAL B 46 5 5 HELIX 10 10 ASN B 53 LEU B 58 1 6 HELIX 11 11 ASP B 88 LEU B 114 1 27 HELIX 12 12 SER B 117 GLN B 124 1 8 HELIX 13 13 VAL B 125 GLU B 130 1 6 HELIX 14 14 ASP B 135 GLU B 146 1 12 HELIX 15 15 GLU B 148 ASP B 153 1 6 HELIX 16 16 TRP B 160 ARG B 175 1 16 HELIX 17 17 LEU B 191 LEU B 204 1 14 HELIX 18 18 ASN B 235 LYS B 237 5 3 HELIX 19 19 GLU B 238 LYS B 255 1 18 SHEET 1 A 6 TYR A 68 VAL A 69 0 SHEET 2 A 6 GLY A 50 VAL A 58 -1 N GLY A 57 O VAL A 69 SHEET 3 A 6 LYS A 84 ASP A 93 -1 O ARG A 87 N ILE A 56 SHEET 4 A 6 VAL A 10 VAL A 14 1 N ILE A 12 O SER A 90 SHEET 5 A 6 GLY A 113 VAL A 118 1 O GLY A 113 N GLY A 13 SHEET 6 A 6 LEU A 144 GLN A 148 1 O VAL A 147 N LEU A 116 SHEET 1 B 8 GLU A 284 PHE A 286 0 SHEET 2 B 8 TYR A 269 PHE A 281 -1 N PHE A 281 O GLU A 284 SHEET 3 B 8 VAL A 295 THR A 299 -1 O GLY A 298 N SER A 277 SHEET 4 B 8 VAL A 237 GLN A 244 -1 N ILE A 238 O ILE A 297 SHEET 5 B 8 VAL A 214 PHE A 221 -1 N PHE A 221 O VAL A 237 SHEET 6 B 8 ILE A 315 LEU A 318 -1 O ILE A 316 N MET A 215 SHEET 7 B 8 GLU A 252 ARG A 260 -1 N LYS A 254 O THR A 317 SHEET 8 B 8 TYR A 269 PHE A 281 -1 O THR A 274 N ILE A 253 SHEET 1 C 2 PHE A 247 LYS A 248 0 SHEET 2 C 2 GLU A 288 ALA A 289 -1 O ALA A 289 N PHE A 247 SHEET 1 D 7 VAL A 325 LEU A 335 0 SHEET 2 D 7 GLU A 377 ALA A 387 -1 O LEU A 382 N TRP A 327 SHEET 3 D 7 SER A 364 LYS A 374 -1 N THR A 371 O GLU A 379 SHEET 4 D 7 THR A 356 VAL A 361 -1 N LEU A 357 O GLY A 368 SHEET 5 D 7 ARG A 394 ARG A 399 -1 O VAL A 396 N SER A 360 SHEET 6 D 7 ARG A 406 GLU A 414 -1 O GLY A 409 N ILE A 397 SHEET 7 D 7 VAL A 325 LEU A 335 -1 N LYS A 332 O LEU A 412 SHEET 1 E 4 LEU B 37 LEU B 41 0 SHEET 2 E 4 GLY B 26 LEU B 31 -1 N SER B 27 O LEU B 41 SHEET 3 E 4 ILE B 16 PHE B 23 -1 N PHE B 23 O GLY B 26 SHEET 4 E 4 LYS B 63 ILE B 65 -1 O VAL B 64 N ALA B 17 SHEET 1 F 2 LYS B 67 ASP B 72 0 SHEET 2 F 2 THR B 77 SER B 81 -1 O SER B 81 N LYS B 67 SHEET 1 G 4 ILE B 217 THR B 221 0 SHEET 2 G 4 ARG B 226 GLY B 233 -1 O ASP B 230 N LYS B 218 SHEET 3 G 4 VAL B 177 ARG B 186 -1 N ILE B 183 O TYR B 227 SHEET 4 G 4 ASP B 260 VAL B 263 -1 O SER B 262 N THR B 184 LINK OG1 THR A 23 MG MG A 913 1555 1555 2.48 LINK OG1 THR A 46 MG MG A 913 1555 1555 2.63 LINK O CYS A 74 ZN ZN A 914 1555 1555 2.75 LINK O HOH A 513 MG MG A 913 1555 1555 2.66 LINK O2B GNP A 912 MG MG A 913 1555 1555 2.39 LINK O2G GNP A 912 MG MG A 913 1555 1555 2.32 LINK N3B GNP A 912 MG MG A 913 1555 1555 2.67 CISPEP 1 LYS A 64 PRO A 65 0 2.42 CISPEP 2 LEU A 256 PRO A 257 0 -0.55 SITE 1 AC1 4 THR A 23 THR A 46 HOH A 513 GNP A 912 SITE 1 AC2 4 CYS A 59 CYS A 62 CYS A 74 CYS A 77 SITE 1 AC3 19 VAL A 18 ASP A 19 HIS A 20 GLY A 21 SITE 2 AC3 19 LYS A 22 THR A 23 THR A 24 MET A 45 SITE 3 AC3 19 THR A 46 GLY A 96 ASN A 149 LYS A 150 SITE 4 AC3 19 ASP A 152 VAL A 153 SER A 184 ALA A 185 SITE 5 AC3 19 LEU A 186 HOH A 513 MG A 913 CRYST1 39.600 112.900 194.100 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025253 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008857 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005152 0.00000