HEADER HYDROLASE 03-AUG-05 2AKC TITLE CRYSTAL STRUCTURE OF TUNGSTATE COMPLEX OF THE PHON PROTEIN FROM S. TITLE 2 TYPHIMURIUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: CLASS A NONSPECIFIC ACID PHOSPHATASE PHON; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: PERIPLASMIC (MATURE) PHON (RESIDUES 21-250); COMPND 5 EC: 3.1.3.2; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA TYPHIMURIUM; SOURCE 3 ORGANISM_TAXID: 602; SOURCE 4 GENE: PHON; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: DH5ALPHA; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PSK- KEYWDS CLASS-A BACTERIAL NON-SPECIFIC ACID PHOSPHATASE, TUNGSTATE COMPLEX OF KEYWDS 2 PHON PROTEIN, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR R.D.MAKDE,V.KUMAR REVDAT 6 23-AUG-23 2AKC 1 REMARK LINK REVDAT 5 04-APR-18 2AKC 1 REMARK REVDAT 4 11-OCT-17 2AKC 1 REMARK REVDAT 3 24-FEB-09 2AKC 1 VERSN REVDAT 2 06-MAR-07 2AKC 1 JRNL REVDAT 1 23-MAY-06 2AKC 0 JRNL AUTH R.D.MAKDE,S.K.MAHAJAN,V.KUMAR JRNL TITL STRUCTURE AND MUTATIONAL ANALYSIS OF THE PHON PROTEIN OF JRNL TITL 2 SALMONELLA TYPHIMURIUM PROVIDE INSIGHT INTO MECHANISTIC JRNL TITL 3 DETAILS. JRNL REF BIOCHEMISTRY V. 46 2079 2007 JRNL REFN ISSN 0006-2960 JRNL PMID 17263560 JRNL DOI 10.1021/BI062180G REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH R.D.MAKDE,V.KUMAR,A.S.RAO,V.S.YADAVA,S.K.MAHAJAN REMARK 1 TITL PURIFICATION, CRYSTALLIZATION AND PRELIMINARY X-RAY REMARK 1 TITL 2 DIFFRACTION STUDIES OF RECOMBINANT CLASS A NON-SPECIFIC ACID REMARK 1 TITL 3 PHOSPHATASE OF SALMONELLA TYPHIMURIUM. REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. D59 515 2003 REMARK 1 REFN ISSN 0907-4449 REMARK 1 PMID 12595712 REMARK 1 DOI 10.1107/S0907444902022679 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 92.3 REMARK 3 NUMBER OF REFLECTIONS : 37038 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.164 REMARK 3 FREE R VALUE : 0.211 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1884 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.38 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 88.00 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3361 REMARK 3 BIN R VALUE (WORKING SET) : 0.2140 REMARK 3 BIN FREE R VALUE : 0.2560 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 180 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6982 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 326 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.34 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.53000 REMARK 3 B22 (A**2) : 4.82000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -5.08000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.21 REMARK 3 ESD FROM SIGMAA (A) : 0.22 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.28 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.23 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.200 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 18.80 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.830 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : ANISOTROPIC REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.280 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.050 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.210 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.280 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : BULK SOLVENT MODELING, FLAT MODEL REMARK 3 KSOL : 0.33 REMARK 3 BSOL : 39.60 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE SUBMISSION IS THE STRUCTURE OF REMARK 3 PERIPLASMIC (MATURE) PHON PROTEIN CONSTITUTED OF 230 AMINO ACID REMARK 3 RESIDUES. THE 20 N-TERMINUS SIGNAL PEPTIDE RESIDUES REMARK 3 CORRESPONDING TO THE GENBANK ENTRY 21913311 (AAM81208) ARE KNOWN REMARK 3 TO BE CLEAVED AND THUS NOT OBSERVED IN THE MATURE PROTEIN. THE REMARK 3 RESIDUE NUMBERING IN THE DEPOSITED STRUCTURE HOWEVER IS AS THE REMARK 3 FULL LENGTH CDS IN THE GENBANK ENTRY. REMARK 4 REMARK 4 2AKC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-AUG-05. REMARK 100 THE DEPOSITION ID IS D_1000033995. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-AUG-02 REMARK 200 TEMPERATURE (KELVIN) : 293 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NI FILTER REMARK 200 OPTICS : OSMIC MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM, TRUNCATE REMARK 200 DATA SCALING SOFTWARE : SCALA, CCP4 (SCALA, TRUNCATE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37069 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.0 REMARK 200 DATA REDUNDANCY : 1.800 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.2 REMARK 200 DATA REDUNDANCY IN SHELL : 1.70 REMARK 200 R MERGE FOR SHELL (I) : 0.11000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: CCP4 REMARK 200 STARTING MODEL: PDB ENTRY 2A96 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG-6000 15%, GLYCEROL 2%, 1MM SODIUM REMARK 280 TUNGSTATE, 25MM SODIUM ACETATE, PH 5.6, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 94.90000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 22.60000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 94.90000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 22.60000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE ENTRY CONTAINS CRYSTALLOGRAPHIC ASYMMETRIC UNIT REMARK 300 CONSISTING OF FOUR CHAINS (TWO DIMERS). A DIMER IS THE KNOWN REMARK 300 BIOLOGICALLY ACTIVE STATE OF THE PHON PROTEIN. CHAINS A AND B FORM REMARK 300 ONE DIMER WHILE THE CHAINS C AND D FORM THE OTHER DIMER. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3750 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18000 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -30.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3730 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17870 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 21 REMARK 465 THR A 22 REMARK 465 SER A 241 REMARK 465 LYS A 242 REMARK 465 GLU A 243 REMARK 465 GLU A 244 REMARK 465 ARG A 245 REMARK 465 PRO A 246 REMARK 465 GLU A 247 REMARK 465 LEU A 248 REMARK 465 ASN A 249 REMARK 465 TYR A 250 REMARK 465 ALA B 21 REMARK 465 THR B 22 REMARK 465 LYS B 242 REMARK 465 GLU B 243 REMARK 465 GLU B 244 REMARK 465 ARG B 245 REMARK 465 PRO B 246 REMARK 465 GLU B 247 REMARK 465 LEU B 248 REMARK 465 ASN B 249 REMARK 465 TYR B 250 REMARK 465 ALA C 21 REMARK 465 THR C 22 REMARK 465 LYS C 242 REMARK 465 GLU C 243 REMARK 465 GLU C 244 REMARK 465 ARG C 245 REMARK 465 PRO C 246 REMARK 465 GLU C 247 REMARK 465 LEU C 248 REMARK 465 ASN C 249 REMARK 465 TYR C 250 REMARK 465 ALA D 21 REMARK 465 THR D 22 REMARK 465 LYS D 242 REMARK 465 GLU D 243 REMARK 465 GLU D 244 REMARK 465 ARG D 245 REMARK 465 PRO D 246 REMARK 465 GLU D 247 REMARK 465 LEU D 248 REMARK 465 ASN D 249 REMARK 465 TYR D 250 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 34 99.67 -63.83 REMARK 500 TYR A 116 -62.92 -103.37 REMARK 500 MET A 127 50.50 37.78 REMARK 500 ARG A 141 79.20 -153.17 REMARK 500 ASN B 34 94.74 -56.56 REMARK 500 ASN C 45 -57.17 -25.07 REMARK 500 MET C 127 51.97 37.53 REMARK 500 ASN D 34 101.41 -53.38 REMARK 500 TYR D 116 -62.97 -105.14 REMARK 500 ASN D 237 2.13 -68.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 WO4 A 501 W REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 197 NE2 REMARK 620 2 WO4 A 501 O1 70.6 REMARK 620 3 WO4 A 501 O2 73.3 109.5 REMARK 620 4 WO4 A 501 O3 177.5 108.8 109.1 REMARK 620 5 WO4 A 501 O4 70.1 110.5 110.8 108.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 WO4 B 502 W REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 197 NE2 REMARK 620 2 WO4 B 502 O1 73.2 REMARK 620 3 WO4 B 502 O2 76.1 109.7 REMARK 620 4 WO4 B 502 O3 173.1 108.2 109.2 REMARK 620 5 WO4 B 502 O4 64.8 110.7 110.4 108.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 WO4 C 503 W REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 197 NE2 REMARK 620 2 WO4 C 503 O1 66.4 REMARK 620 3 WO4 C 503 O2 74.8 110.3 REMARK 620 4 WO4 C 503 O3 174.0 107.9 109.8 REMARK 620 5 WO4 C 503 O4 72.8 110.8 109.5 108.3 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 WO4 D 504 W REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS D 197 NE2 REMARK 620 2 WO4 D 504 O1 67.2 REMARK 620 3 WO4 D 504 O2 73.2 109.6 REMARK 620 4 WO4 D 504 O3 175.8 108.6 109.4 REMARK 620 5 WO4 D 504 O4 72.6 110.3 109.8 109.0 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE WO4 A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE WO4 B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE WO4 C 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE WO4 D 504 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2A96 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF PHOSPHATE TETHERED PHON OF S. TYPHIMURIUM DBREF 2AKC A 21 250 GB 21913311 AAM81208 21 250 DBREF 2AKC B 21 250 GB 21913311 AAM81208 21 250 DBREF 2AKC C 21 250 GB 21913311 AAM81208 21 250 DBREF 2AKC D 21 250 GB 21913311 AAM81208 21 250 SEQRES 1 A 230 ALA THR MET GLN PRO PHE HIS SER PRO GLU GLU SER VAL SEQRES 2 A 230 ASN SER GLN PHE TYR LEU PRO PRO PRO PRO GLY ASN ASP SEQRES 3 A 230 ASP PRO ALA PHE ARG TYR ASP LYS GLU ALA TYR PHE LYS SEQRES 4 A 230 GLY TYR ALA ILE LYS GLY SER PRO ARG TRP LYS GLN ALA SEQRES 5 A 230 ALA GLU ASP ALA ASP ILE SER VAL GLU ASN ILE ALA ARG SEQRES 6 A 230 ILE PHE SER PRO VAL VAL GLY ALA LYS ILE SER PRO LYS SEQRES 7 A 230 ASP THR PRO GLU THR TRP ASN MET LEU GLN ASN LEU LEU SEQRES 8 A 230 LYS VAL GLY GLY TYR TYR ALA THR ALA SER ALA LYS LYS SEQRES 9 A 230 TYR TYR MET ARG THR ARG PRO PHE VAL LEU PHE ASN HIS SEQRES 10 A 230 SER THR CYS ARG PRO GLU ASP GLU ASN THR LEU ARG LYS SEQRES 11 A 230 ASP GLY SER TYR PRO SER GLY HIS THR ALA TYR SER THR SEQRES 12 A 230 LEU LEU ALA LEU VAL LEU SER GLN ALA ARG PRO GLU ARG SEQRES 13 A 230 ALA GLN GLU LEU ALA ARG ARG GLY TRP GLU PHE GLY GLN SEQRES 14 A 230 SER ARG VAL ILE CYS GLY ALA HIS TRP GLN SER ASP VAL SEQRES 15 A 230 ASP ALA GLY ARG TYR VAL GLY ALA VAL GLU PHE ALA ARG SEQRES 16 A 230 LEU GLN THR ILE PRO ALA PHE GLN LYS SER LEU ALA LYS SEQRES 17 A 230 VAL ARG GLU GLU LEU ASN ASP LYS ASN ASN LEU LEU SER SEQRES 18 A 230 LYS GLU GLU ARG PRO GLU LEU ASN TYR SEQRES 1 B 230 ALA THR MET GLN PRO PHE HIS SER PRO GLU GLU SER VAL SEQRES 2 B 230 ASN SER GLN PHE TYR LEU PRO PRO PRO PRO GLY ASN ASP SEQRES 3 B 230 ASP PRO ALA PHE ARG TYR ASP LYS GLU ALA TYR PHE LYS SEQRES 4 B 230 GLY TYR ALA ILE LYS GLY SER PRO ARG TRP LYS GLN ALA SEQRES 5 B 230 ALA GLU ASP ALA ASP ILE SER VAL GLU ASN ILE ALA ARG SEQRES 6 B 230 ILE PHE SER PRO VAL VAL GLY ALA LYS ILE SER PRO LYS SEQRES 7 B 230 ASP THR PRO GLU THR TRP ASN MET LEU GLN ASN LEU LEU SEQRES 8 B 230 LYS VAL GLY GLY TYR TYR ALA THR ALA SER ALA LYS LYS SEQRES 9 B 230 TYR TYR MET ARG THR ARG PRO PHE VAL LEU PHE ASN HIS SEQRES 10 B 230 SER THR CYS ARG PRO GLU ASP GLU ASN THR LEU ARG LYS SEQRES 11 B 230 ASP GLY SER TYR PRO SER GLY HIS THR ALA TYR SER THR SEQRES 12 B 230 LEU LEU ALA LEU VAL LEU SER GLN ALA ARG PRO GLU ARG SEQRES 13 B 230 ALA GLN GLU LEU ALA ARG ARG GLY TRP GLU PHE GLY GLN SEQRES 14 B 230 SER ARG VAL ILE CYS GLY ALA HIS TRP GLN SER ASP VAL SEQRES 15 B 230 ASP ALA GLY ARG TYR VAL GLY ALA VAL GLU PHE ALA ARG SEQRES 16 B 230 LEU GLN THR ILE PRO ALA PHE GLN LYS SER LEU ALA LYS SEQRES 17 B 230 VAL ARG GLU GLU LEU ASN ASP LYS ASN ASN LEU LEU SER SEQRES 18 B 230 LYS GLU GLU ARG PRO GLU LEU ASN TYR SEQRES 1 C 230 ALA THR MET GLN PRO PHE HIS SER PRO GLU GLU SER VAL SEQRES 2 C 230 ASN SER GLN PHE TYR LEU PRO PRO PRO PRO GLY ASN ASP SEQRES 3 C 230 ASP PRO ALA PHE ARG TYR ASP LYS GLU ALA TYR PHE LYS SEQRES 4 C 230 GLY TYR ALA ILE LYS GLY SER PRO ARG TRP LYS GLN ALA SEQRES 5 C 230 ALA GLU ASP ALA ASP ILE SER VAL GLU ASN ILE ALA ARG SEQRES 6 C 230 ILE PHE SER PRO VAL VAL GLY ALA LYS ILE SER PRO LYS SEQRES 7 C 230 ASP THR PRO GLU THR TRP ASN MET LEU GLN ASN LEU LEU SEQRES 8 C 230 LYS VAL GLY GLY TYR TYR ALA THR ALA SER ALA LYS LYS SEQRES 9 C 230 TYR TYR MET ARG THR ARG PRO PHE VAL LEU PHE ASN HIS SEQRES 10 C 230 SER THR CYS ARG PRO GLU ASP GLU ASN THR LEU ARG LYS SEQRES 11 C 230 ASP GLY SER TYR PRO SER GLY HIS THR ALA TYR SER THR SEQRES 12 C 230 LEU LEU ALA LEU VAL LEU SER GLN ALA ARG PRO GLU ARG SEQRES 13 C 230 ALA GLN GLU LEU ALA ARG ARG GLY TRP GLU PHE GLY GLN SEQRES 14 C 230 SER ARG VAL ILE CYS GLY ALA HIS TRP GLN SER ASP VAL SEQRES 15 C 230 ASP ALA GLY ARG TYR VAL GLY ALA VAL GLU PHE ALA ARG SEQRES 16 C 230 LEU GLN THR ILE PRO ALA PHE GLN LYS SER LEU ALA LYS SEQRES 17 C 230 VAL ARG GLU GLU LEU ASN ASP LYS ASN ASN LEU LEU SER SEQRES 18 C 230 LYS GLU GLU ARG PRO GLU LEU ASN TYR SEQRES 1 D 230 ALA THR MET GLN PRO PHE HIS SER PRO GLU GLU SER VAL SEQRES 2 D 230 ASN SER GLN PHE TYR LEU PRO PRO PRO PRO GLY ASN ASP SEQRES 3 D 230 ASP PRO ALA PHE ARG TYR ASP LYS GLU ALA TYR PHE LYS SEQRES 4 D 230 GLY TYR ALA ILE LYS GLY SER PRO ARG TRP LYS GLN ALA SEQRES 5 D 230 ALA GLU ASP ALA ASP ILE SER VAL GLU ASN ILE ALA ARG SEQRES 6 D 230 ILE PHE SER PRO VAL VAL GLY ALA LYS ILE SER PRO LYS SEQRES 7 D 230 ASP THR PRO GLU THR TRP ASN MET LEU GLN ASN LEU LEU SEQRES 8 D 230 LYS VAL GLY GLY TYR TYR ALA THR ALA SER ALA LYS LYS SEQRES 9 D 230 TYR TYR MET ARG THR ARG PRO PHE VAL LEU PHE ASN HIS SEQRES 10 D 230 SER THR CYS ARG PRO GLU ASP GLU ASN THR LEU ARG LYS SEQRES 11 D 230 ASP GLY SER TYR PRO SER GLY HIS THR ALA TYR SER THR SEQRES 12 D 230 LEU LEU ALA LEU VAL LEU SER GLN ALA ARG PRO GLU ARG SEQRES 13 D 230 ALA GLN GLU LEU ALA ARG ARG GLY TRP GLU PHE GLY GLN SEQRES 14 D 230 SER ARG VAL ILE CYS GLY ALA HIS TRP GLN SER ASP VAL SEQRES 15 D 230 ASP ALA GLY ARG TYR VAL GLY ALA VAL GLU PHE ALA ARG SEQRES 16 D 230 LEU GLN THR ILE PRO ALA PHE GLN LYS SER LEU ALA LYS SEQRES 17 D 230 VAL ARG GLU GLU LEU ASN ASP LYS ASN ASN LEU LEU SER SEQRES 18 D 230 LYS GLU GLU ARG PRO GLU LEU ASN TYR HET WO4 A 501 5 HET WO4 B 502 5 HET WO4 C 503 5 HET WO4 D 504 5 HETNAM WO4 TUNGSTATE(VI)ION FORMUL 5 WO4 4(O4 W 2-) FORMUL 9 HOH *326(H2 O) HELIX 1 1 SER A 28 SER A 32 5 5 HELIX 2 2 ASN A 34 LEU A 39 1 6 HELIX 3 3 ASP A 47 ILE A 63 1 17 HELIX 4 4 SER A 66 ASP A 77 1 12 HELIX 5 5 SER A 79 GLY A 92 1 14 HELIX 6 6 THR A 100 TYR A 116 1 17 HELIX 7 7 THR A 119 MET A 127 1 9 HELIX 8 8 ARG A 130 ASN A 136 1 7 HELIX 9 9 ARG A 141 LYS A 150 1 10 HELIX 10 10 SER A 156 ARG A 173 1 18 HELIX 11 11 ARG A 176 CYS A 194 1 19 HELIX 12 12 TRP A 198 THR A 218 1 21 HELIX 13 13 ILE A 219 ASN A 234 1 16 HELIX 14 14 ASP A 235 LEU A 239 5 5 HELIX 15 15 SER B 28 SER B 32 5 5 HELIX 16 16 ASN B 34 LEU B 39 1 6 HELIX 17 17 ASP B 47 ILE B 63 1 17 HELIX 18 18 SER B 66 ALA B 76 1 11 HELIX 19 19 SER B 79 GLY B 92 1 14 HELIX 20 20 THR B 100 TYR B 116 1 17 HELIX 21 21 THR B 119 MET B 127 1 9 HELIX 22 22 ARG B 130 PHE B 135 1 6 HELIX 23 23 ARG B 141 GLU B 143 5 3 HELIX 24 24 ASP B 144 ARG B 149 1 6 HELIX 25 25 SER B 156 ARG B 173 1 18 HELIX 26 26 ARG B 176 CYS B 194 1 19 HELIX 27 27 TRP B 198 THR B 218 1 21 HELIX 28 28 ILE B 219 ASP B 235 1 17 HELIX 29 29 LYS B 236 LEU B 239 5 4 HELIX 30 30 SER C 28 SER C 32 5 5 HELIX 31 31 ASN C 34 LEU C 39 1 6 HELIX 32 32 ASP C 47 ILE C 63 1 17 HELIX 33 33 SER C 66 ALA C 76 1 11 HELIX 34 34 SER C 79 GLY C 92 1 14 HELIX 35 35 THR C 100 GLY C 114 1 15 HELIX 36 36 THR C 119 MET C 127 1 9 HELIX 37 37 ARG C 130 PHE C 135 1 6 HELIX 38 38 ARG C 141 GLU C 143 5 3 HELIX 39 39 ASP C 144 ARG C 149 1 6 HELIX 40 40 SER C 156 ARG C 173 1 18 HELIX 41 41 ARG C 176 CYS C 194 1 19 HELIX 42 42 TRP C 198 GLN C 217 1 20 HELIX 43 43 ILE C 219 ASN C 234 1 16 HELIX 44 44 SER D 28 SER D 32 5 5 HELIX 45 45 ASN D 34 LEU D 39 1 6 HELIX 46 46 ASP D 47 ILE D 63 1 17 HELIX 47 47 SER D 66 ASP D 75 1 10 HELIX 48 48 SER D 79 GLY D 92 1 14 HELIX 49 49 THR D 100 TYR D 116 1 17 HELIX 50 50 THR D 119 MET D 127 1 9 HELIX 51 51 ARG D 130 PHE D 135 1 6 HELIX 52 52 ARG D 141 GLU D 143 5 3 HELIX 53 53 ASP D 144 ARG D 149 1 6 HELIX 54 54 SER D 156 ARG D 173 1 18 HELIX 55 55 ARG D 176 CYS D 194 1 19 HELIX 56 56 TRP D 198 GLN D 217 1 20 HELIX 57 57 ILE D 219 ASN D 234 1 16 HELIX 58 58 ASP D 235 LEU D 239 5 5 SSBOND 1 CYS A 140 CYS A 194 1555 1555 2.03 SSBOND 2 CYS B 140 CYS B 194 1555 1555 2.03 SSBOND 3 CYS C 140 CYS C 194 1555 1555 2.03 SSBOND 4 CYS D 140 CYS D 194 1555 1555 2.03 LINK NE2 HIS A 197 W WO4 A 501 1555 1555 2.46 LINK NE2 HIS B 197 W WO4 B 502 1555 1555 2.58 LINK NE2 HIS C 197 W WO4 C 503 1555 1555 2.54 LINK NE2 HIS D 197 W WO4 D 504 1555 1555 2.51 CISPEP 1 TYR A 154 PRO A 155 0 -0.26 CISPEP 2 TYR B 154 PRO B 155 0 -0.05 CISPEP 3 TYR C 154 PRO C 155 0 -0.16 CISPEP 4 TYR D 154 PRO D 155 0 0.12 SITE 1 AC1 7 LYS A 123 ARG A 130 SER A 156 GLY A 157 SITE 2 AC1 7 HIS A 158 ARG A 191 HIS A 197 SITE 1 AC2 8 LYS B 123 ARG B 130 SER B 156 GLY B 157 SITE 2 AC2 8 HIS B 158 ARG B 191 HIS B 197 HOH B 553 SITE 1 AC3 7 LYS C 123 ARG C 130 SER C 156 GLY C 157 SITE 2 AC3 7 HIS C 158 ARG C 191 HIS C 197 SITE 1 AC4 8 LYS D 123 ARG D 130 LEU D 148 SER D 156 SITE 2 AC4 8 GLY D 157 HIS D 158 ARG D 191 HIS D 197 CRYST1 189.800 45.200 112.700 90.00 111.40 90.00 C 1 2 1 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005269 0.000000 0.002065 0.00000 SCALE2 0.000000 0.022124 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009530 0.00000