HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 03-AUG-05 2AKL TITLE SOLUTION STRUCTURE FOR PHN-A LIKE PROTEIN PA0128 FROM PSEUDOMONAS TITLE 2 AERUGINOSA COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHNA-LIKE PROTEIN PA0128; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: HYPOTHETICAL PROTEIN PA0128; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA PAO1; SOURCE 3 ORGANISM_TAXID: 208964; SOURCE 4 STRAIN: PAO1; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS TWO DOMAINS; ZN BINDING PROTEIN; BETA-STRAND PROTEIN, STRUCTURAL KEYWDS 2 GENOMICS, PSI, PROTEIN STRUCTURE INITIATIVE, NORTHEAST STRUCTURAL KEYWDS 3 GENOMICS CONSORTIUM; NESG; ONTARIO CENTRE FOR STRUCTURAL PROTEOMICS; KEYWDS 4 OCSP, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM, UNKNOWN FUNCTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR S.SRISAILAM,A.YEE,A.LEMAK,J.A.LUKIN,S.BANSAL,J.H.PRESTEGARD, AUTHOR 2 C.H.ARROWSMITH,NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG), AUTHOR 3 ONTARIO CENTRE FOR STRUCTURAL PROTEOMICS (OCSP) REVDAT 5 09-MAR-22 2AKL 1 REMARK SEQADV LINK REVDAT 4 24-FEB-09 2AKL 1 VERSN REVDAT 3 10-APR-07 2AKL 1 JRNL REVDAT 2 19-SEP-06 2AKL 1 JRNL REVDAT 1 18-JUL-06 2AKL 0 JRNL AUTH S.SRISAILAM,J.A.LUKIN,A.LEMAK,A.YEE,C.H.ARROWSMITH JRNL TITL SEQUENCE SPECIFIC RESONANCE ASSIGNMENT OF A HYPOTHETICAL JRNL TITL 2 PROTEIN PA0128 FROM PSEUDOMONAS AERUGINOSA JRNL REF J.BIOMOL.NMR V. 36 27 2006 JRNL REFN ISSN 0925-2738 JRNL PMID 16703420 JRNL DOI 10.1007/S10858-006-0011-0 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRPIPE 2.3, CNS 1.1 REMARK 3 AUTHORS : DELAGLIO, F. (NMRPIPE), BRUNGER, A. T. ET AL (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 2448 NOE DERIVED DISTANCE RESTRAINTS, REMARK 3 132 TORSION ANGLE RESTRAINTS, 62 RDC RESTRAINTS REMARK 4 REMARK 4 2AKL COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-AUG-05. REMARK 100 THE DEPOSITION ID IS D_1000034004. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 400 MM NACL, 20 MM PHOSPHATE REMARK 210 BUFFER REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1MM PA0128, U-15N,13C: 400 MM REMARK 210 NACL, 20 MM NA2PO4, 1 MM REMARK 210 BENZAMIDINE, 15 MM DTT, 20 UM REMARK 210 ZNSO4, 0.01% NAN3, 95% H2O, 5% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY; J MODULATED REMARK 210 HSQC FOR RDC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 500 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : SPARKY 3.106, CYANA 2.1 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 MET A -21 REMARK 465 GLY A -20 REMARK 465 SER A -19 REMARK 465 SER A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 SER A -11 REMARK 465 SER A -10 REMARK 465 GLY A -9 REMARK 465 ARG A -8 REMARK 465 GLU A -7 REMARK 465 ASN A -6 REMARK 465 LEU A -5 REMARK 465 TYR A -4 REMARK 465 PHE A -3 REMARK 465 GLN A -2 REMARK 465 GLY A -1 REMARK 465 HIS A 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 7 -169.69 -65.78 REMARK 500 1 PRO A 9 11.31 -68.19 REMARK 500 1 GLU A 14 5.76 84.85 REMARK 500 1 TYR A 15 47.32 -82.70 REMARK 500 1 ASP A 19 74.76 -110.04 REMARK 500 1 THR A 39 150.21 70.41 REMARK 500 1 ASP A 57 94.96 -69.13 REMARK 500 1 VAL A 78 97.27 -50.04 REMARK 500 1 HIS A 92 51.56 -100.64 REMARK 500 1 ASP A 93 102.15 -161.53 REMARK 500 2 PRO A 7 -167.51 -73.06 REMARK 500 2 PRO A 9 7.76 -68.44 REMARK 500 2 SER A 13 -77.40 -57.88 REMARK 500 2 GLU A 14 -21.07 171.15 REMARK 500 2 TYR A 15 36.99 -78.87 REMARK 500 2 THR A 39 -67.55 69.54 REMARK 500 2 ASP A 42 153.51 68.65 REMARK 500 2 LEU A 55 -157.89 -95.79 REMARK 500 2 VAL A 78 96.54 -51.98 REMARK 500 2 ILE A 85 -178.72 -67.58 REMARK 500 2 HIS A 92 54.17 -106.91 REMARK 500 3 PRO A 7 -167.03 -71.28 REMARK 500 3 SER A 13 -77.93 -59.50 REMARK 500 3 GLU A 14 -15.59 176.91 REMARK 500 3 TYR A 15 32.74 -81.81 REMARK 500 3 ASP A 43 -78.17 -156.94 REMARK 500 3 VAL A 78 96.99 -49.92 REMARK 500 3 ILE A 85 -175.53 -66.58 REMARK 500 3 HIS A 92 52.16 -108.33 REMARK 500 4 THR A 4 33.04 -83.54 REMARK 500 4 PRO A 7 -163.93 -73.50 REMARK 500 4 SER A 13 -78.39 -48.47 REMARK 500 4 GLU A 14 -27.83 169.86 REMARK 500 4 GLU A 27 -73.46 -69.36 REMARK 500 4 LYS A 70 -88.84 -43.14 REMARK 500 4 VAL A 78 97.48 -52.12 REMARK 500 4 ASN A 84 42.38 71.95 REMARK 500 4 ILE A 85 -177.42 -67.27 REMARK 500 4 HIS A 92 45.98 -84.34 REMARK 500 5 PRO A 7 -169.43 -64.57 REMARK 500 5 PRO A 9 7.25 -69.11 REMARK 500 5 ASN A 12 -3.30 70.44 REMARK 500 5 SER A 13 -77.68 -55.34 REMARK 500 5 GLU A 14 -7.24 164.31 REMARK 500 5 TYR A 15 41.56 -80.64 REMARK 500 5 ASP A 19 79.07 -115.75 REMARK 500 5 THR A 39 -85.17 67.40 REMARK 500 5 ALA A 40 50.72 175.10 REMARK 500 5 SER A 41 88.54 -69.03 REMARK 500 5 ASP A 42 177.99 68.11 REMARK 500 REMARK 500 THIS ENTRY HAS 205 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 117 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 8 SG REMARK 620 2 CYS A 11 SG 110.4 REMARK 620 3 CYS A 25 SG 107.5 112.1 REMARK 620 4 CYS A 28 SG 111.2 107.9 107.7 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 117 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: PAT1 RELATED DB: TARGETDB DBREF 2AKL A 3 114 UNP Q9I704 Q9I704_PSEAE 2 113 SEQADV 2AKL MET A -21 UNP Q9I704 EXPRESSION TAG SEQADV 2AKL GLY A -20 UNP Q9I704 EXPRESSION TAG SEQADV 2AKL SER A -19 UNP Q9I704 EXPRESSION TAG SEQADV 2AKL SER A -18 UNP Q9I704 EXPRESSION TAG SEQADV 2AKL HIS A -17 UNP Q9I704 EXPRESSION TAG SEQADV 2AKL HIS A -16 UNP Q9I704 EXPRESSION TAG SEQADV 2AKL HIS A -15 UNP Q9I704 EXPRESSION TAG SEQADV 2AKL HIS A -14 UNP Q9I704 EXPRESSION TAG SEQADV 2AKL HIS A -13 UNP Q9I704 EXPRESSION TAG SEQADV 2AKL HIS A -12 UNP Q9I704 EXPRESSION TAG SEQADV 2AKL SER A -11 UNP Q9I704 EXPRESSION TAG SEQADV 2AKL SER A -10 UNP Q9I704 EXPRESSION TAG SEQADV 2AKL GLY A -9 UNP Q9I704 EXPRESSION TAG SEQADV 2AKL ARG A -8 UNP Q9I704 EXPRESSION TAG SEQADV 2AKL GLU A -7 UNP Q9I704 EXPRESSION TAG SEQADV 2AKL ASN A -6 UNP Q9I704 EXPRESSION TAG SEQADV 2AKL LEU A -5 UNP Q9I704 EXPRESSION TAG SEQADV 2AKL TYR A -4 UNP Q9I704 EXPRESSION TAG SEQADV 2AKL PHE A -3 UNP Q9I704 EXPRESSION TAG SEQADV 2AKL GLN A -2 UNP Q9I704 EXPRESSION TAG SEQADV 2AKL GLY A -1 UNP Q9I704 EXPRESSION TAG SEQADV 2AKL HIS A 0 UNP Q9I704 EXPRESSION TAG SEQADV 2AKL MET A 1 UNP Q9I704 CLONING ARTIFACT SEQADV 2AKL VAL A 2 UNP Q9I704 CLONING ARTIFACT SEQADV 2AKL GLY A 115 UNP Q9I704 CLONING ARTIFACT SEQADV 2AKL SER A 116 UNP Q9I704 CLONING ARTIFACT SEQRES 1 A 138 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 138 ARG GLU ASN LEU TYR PHE GLN GLY HIS MET VAL SER THR SEQRES 3 A 138 LEU PRO PRO CYS PRO GLN CYS ASN SER GLU TYR THR TYR SEQRES 4 A 138 GLU ASP GLY ALA LEU LEU VAL CYS PRO GLU CYS ALA HIS SEQRES 5 A 138 GLU TRP SER PRO ASN GLU ALA ALA THR ALA SER ASP ASP SEQRES 6 A 138 GLY LYS VAL ILE LYS ASP SER VAL GLY ASN VAL LEU GLN SEQRES 7 A 138 ASP GLY ASP THR ILE THR VAL ILE LYS ASP LEU LYS VAL SEQRES 8 A 138 LYS GLY SER SER LEU VAL VAL LYS VAL GLY THR LYS VAL SEQRES 9 A 138 LYS ASN ILE ARG LEU VAL ASP GLY ASP HIS ASP ILE ASP SEQRES 10 A 138 CYS LYS ILE ASP GLY ILE GLY ALA MET LYS LEU LYS SER SEQRES 11 A 138 GLU PHE VAL ARG LYS VAL GLY SER HET ZN A 117 1 HETNAM ZN ZINC ION FORMUL 2 ZN ZN 2+ HELIX 1 1 LYS A 107 VAL A 111 5 5 SHEET 1 A 3 TYR A 17 GLU A 18 0 SHEET 2 A 3 LEU A 23 CYS A 25 -1 O VAL A 24 N TYR A 17 SHEET 3 A 3 HIS A 30 TRP A 32 -1 O TRP A 32 N LEU A 23 SHEET 1 B 2 THR A 60 THR A 62 0 SHEET 2 B 2 LYS A 81 LYS A 83 -1 O VAL A 82 N ILE A 61 SHEET 1 C 2 LEU A 67 LYS A 68 0 SHEET 2 C 2 VAL A 75 VAL A 76 -1 O VAL A 76 N LEU A 67 SHEET 1 D 3 ARG A 86 LEU A 87 0 SHEET 2 D 3 ILE A 94 ILE A 98 -1 O ASP A 95 N ARG A 86 SHEET 3 D 3 GLY A 102 LEU A 106 -1 O GLY A 102 N ILE A 98 LINK SG CYS A 8 ZN ZN A 117 1555 1555 2.33 LINK SG CYS A 11 ZN ZN A 117 1555 1555 2.33 LINK SG CYS A 25 ZN ZN A 117 1555 1555 2.32 LINK SG CYS A 28 ZN ZN A 117 1555 1555 2.32 SITE 1 AC1 4 CYS A 8 CYS A 11 CYS A 25 CYS A 28 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1