HEADER TRANSFERASE 08-AUG-05 2AM5 TITLE CRYSTAL STRUCTURE OF N-ACETYLGLUCOSAMINYLTRANSFERASE I IN COMPLEX WITH TITLE 2 UDP COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALPHA-1,3-MANNOSYL-GLYCOPROTEIN 2-BETA-N- COMPND 3 ACETYLGLUCOSAMINYLTRANSFERASE; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: RESIDUES 106-447; COMPND 6 SYNONYM: N-GLYCOSYL-OLIGOSACCHARIDE-GLYCOPROTEIN N- COMPND 7 ACETYLGLUCOSAMINYLTRANSFERASE I, GNT-I, GLCNAC-T I; COMPND 8 EC: 2.4.1.101; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ORYCTOLAGUS CUNICULUS; SOURCE 3 ORGANISM_COMMON: RABBIT; SOURCE 4 ORGANISM_TAXID: 9986; SOURCE 5 CELL_LINE: GNT1-5G5; SOURCE 6 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: CHINESE HAMSTER; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 10029 KEYWDS TRANSFERASE, N-ACETYLGLUCOSAMINYLTRANSFERASE, GLYCOSYLTRANSFERASE, KEYWDS 2 UDP-GLCNAC, UDP EXPDTA X-RAY DIFFRACTION AUTHOR J.M.RINI,R.D.GORDON REVDAT 6 30-OCT-24 2AM5 1 REMARK REVDAT 5 23-AUG-23 2AM5 1 REMARK LINK REVDAT 4 13-JUL-11 2AM5 1 VERSN REVDAT 3 24-FEB-09 2AM5 1 VERSN REVDAT 2 18-JUL-06 2AM5 1 JRNL REVDAT 1 27-JUN-06 2AM5 0 JRNL AUTH R.D.GORDON,P.SIVARAJAH,M.SATKUNARAJAH,D.MA,C.A.TARLING, JRNL AUTH 2 D.VIZITIU,S.G.WITHERS,J.M.RINI JRNL TITL X-RAY CRYSTAL STRUCTURES OF RABBIT JRNL TITL 2 N-ACETYLGLUCOSAMINYLTRANSFERASE I (GNT I) IN COMPLEX WITH JRNL TITL 3 DONOR SUBSTRATE ANALOGUES. JRNL REF J.MOL.BIOL. V. 360 67 2006 JRNL REFN ISSN 0022-2836 JRNL PMID 16769084 JRNL DOI 10.1016/J.JMB.2006.04.058 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.94 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 98.0 REMARK 3 NUMBER OF REFLECTIONS : 44852 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.198 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2256 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.004 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.70 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.10 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 6729 REMARK 3 BIN R VALUE (WORKING SET) : 0.1740 REMARK 3 BIN FREE R VALUE : 0.1920 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.10 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 362 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.010 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2811 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 56 REMARK 3 SOLVENT ATOMS : 261 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 12.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 13.28 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.14 REMARK 3 ESD FROM SIGMAA (A) : -0.0 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.16 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.05 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.500 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.360 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.980 ; 3.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 3.070 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 4.130 ; 6.000 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : CNS BULK SOLVENT MODEL USED REMARK 3 KSOL : 0.42 REMARK 3 BSOL : 39.15 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : GLYCEROL.PARAM REMARK 3 PARAMETER FILE 5 : DONOR.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN_NOHYDROGEN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : GLYCEROL.TOP REMARK 3 TOPOLOGY FILE 5 : DONOR.TOP REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2AM5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-SEP-05. REMARK 100 THE DEPOSITION ID IS D_1000034055. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-JUL-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0332 REMARK 200 MONOCHROMATOR : SYNCHROTRON REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : SBC-3 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44852 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 31.940 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.70 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: 1FO9, 1FOA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 40% PEK 6000, 1M TRIS, MNCL2, PH 7.9, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 20.30950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 50.92600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.01450 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 50.92600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 20.30950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 41.01450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS A 239 CA - CB - SG ANGL. DEV. = 6.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 115 -83.07 -149.13 REMARK 500 THR A 119 4.53 -69.58 REMARK 500 CYS A 145 -39.94 75.67 REMARK 500 HIS A 330 -60.27 -140.27 REMARK 500 ALA A 416 14.62 59.93 REMARK 500 ASP A 440 48.58 -146.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 448 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 213 OD2 REMARK 620 2 UDP A 449 O1A 94.4 REMARK 620 3 UDP A 449 O3B 175.2 85.8 REMARK 620 4 HOH A 489 O 86.2 95.8 98.5 REMARK 620 5 HOH A 528 O 87.4 176.3 92.1 87.6 REMARK 620 6 HOH A 545 O 87.4 85.8 87.8 173.5 91.1 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 448 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UDP A 449 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 450 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 451 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 452 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 453 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 454 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1FOA RELATED DB: PDB REMARK 900 GNT-I IN COMPLEX WITH NATIVE UDP-GLCNAC/MN2+ DONOR REMARK 900 RELATED ID: 1FO9 RELATED DB: PDB REMARK 900 GNT-I APO STRUCTURE REMARK 900 RELATED ID: 1FO8 RELATED DB: PDB REMARK 900 GNT-I METHYLMERCURY DERIVATIVE DBREF 2AM5 A 106 447 UNP P27115 MGAT1_RABIT 106 447 SEQRES 1 A 342 ALA VAL ILE PRO ILE LEU VAL ILE ALA CYS ASP ARG SER SEQRES 2 A 342 THR VAL ARG ARG CYS LEU ASP LYS LEU LEU HIS TYR ARG SEQRES 3 A 342 PRO SER ALA GLU LEU PHE PRO ILE ILE VAL SER GLN ASP SEQRES 4 A 342 CYS GLY HIS GLU GLU THR ALA GLN VAL ILE ALA SER TYR SEQRES 5 A 342 GLY SER ALA VAL THR HIS ILE ARG GLN PRO ASP LEU SER SEQRES 6 A 342 ASN ILE ALA VAL GLN PRO ASP HIS ARG LYS PHE GLN GLY SEQRES 7 A 342 TYR TYR LYS ILE ALA ARG HIS TYR ARG TRP ALA LEU GLY SEQRES 8 A 342 GLN ILE PHE HIS ASN PHE ASN TYR PRO ALA ALA VAL VAL SEQRES 9 A 342 VAL GLU ASP ASP LEU GLU VAL ALA PRO ASP PHE PHE GLU SEQRES 10 A 342 TYR PHE GLN ALA THR TYR PRO LEU LEU LYS ALA ASP PRO SEQRES 11 A 342 SER LEU TRP CYS VAL SER ALA TRP ASN ASP ASN GLY LYS SEQRES 12 A 342 GLU GLN MET VAL ASP SER SER LYS PRO GLU LEU LEU TYR SEQRES 13 A 342 ARG THR ASP PHE PHE PRO GLY LEU GLY TRP LEU LEU LEU SEQRES 14 A 342 ALA GLU LEU TRP ALA GLU LEU GLU PRO LYS TRP PRO LYS SEQRES 15 A 342 ALA PHE TRP ASP ASP TRP MET ARG ARG PRO GLU GLN ARG SEQRES 16 A 342 LYS GLY ARG ALA CYS VAL ARG PRO GLU ILE SER ARG THR SEQRES 17 A 342 MET THR PHE GLY ARG LYS GLY VAL SER HIS GLY GLN PHE SEQRES 18 A 342 PHE ASP GLN HIS LEU LYS PHE ILE LYS LEU ASN GLN GLN SEQRES 19 A 342 PHE VAL PRO PHE THR GLN LEU ASP LEU SER TYR LEU GLN SEQRES 20 A 342 GLN GLU ALA TYR ASP ARG ASP PHE LEU ALA ARG VAL TYR SEQRES 21 A 342 GLY ALA PRO GLN LEU GLN VAL GLU LYS VAL ARG THR ASN SEQRES 22 A 342 ASP ARG LYS GLU LEU GLY GLU VAL ARG VAL GLN TYR THR SEQRES 23 A 342 GLY ARG ASP SER PHE LYS ALA PHE ALA LYS ALA LEU GLY SEQRES 24 A 342 VAL MET ASP ASP LEU LYS SER GLY VAL PRO ARG ALA GLY SEQRES 25 A 342 TYR ARG GLY ILE VAL THR PHE LEU PHE ARG GLY ARG ARG SEQRES 26 A 342 VAL HIS LEU ALA PRO PRO GLN THR TRP ASP GLY TYR ASP SEQRES 27 A 342 PRO SER TRP THR HET MN A 448 1 HET UDP A 449 25 HET GOL A 450 6 HET GOL A 451 6 HET GOL A 452 6 HET GOL A 453 6 HET GOL A 454 6 HETNAM MN MANGANESE (II) ION HETNAM UDP URIDINE-5'-DIPHOSPHATE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 MN MN 2+ FORMUL 3 UDP C9 H14 N2 O12 P2 FORMUL 4 GOL 5(C3 H8 O3) FORMUL 9 HOH *261(H2 O) HELIX 1 1 THR A 119 ARG A 131 1 13 HELIX 2 2 HIS A 147 SER A 156 1 10 HELIX 3 3 TYR A 157 VAL A 161 5 5 HELIX 4 4 HIS A 178 LYS A 180 5 3 HELIX 5 5 PHE A 181 ASN A 201 1 21 HELIX 6 6 ASP A 219 ASP A 234 1 16 HELIX 7 7 LYS A 248 VAL A 252 5 5 HELIX 8 8 ALA A 275 GLU A 282 1 8 HELIX 9 9 PRO A 283 TRP A 285 5 3 HELIX 10 10 PHE A 289 ARG A 295 1 7 HELIX 11 11 ARG A 296 LYS A 301 1 6 HELIX 12 12 GLY A 324 HIS A 330 1 7 HELIX 13 13 LEU A 331 ILE A 334 5 4 HELIX 14 14 PRO A 342 LEU A 346 5 5 HELIX 15 15 LEU A 348 LEU A 351 5 4 HELIX 16 16 GLN A 352 ALA A 367 1 16 HELIX 17 17 GLN A 371 THR A 377 1 7 HELIX 18 18 GLY A 392 LEU A 403 1 12 SHEET 1 A 8 THR A 162 ARG A 165 0 SHEET 2 A 8 ILE A 139 GLN A 143 1 N VAL A 141 O THR A 162 SHEET 3 A 8 ILE A 110 ALA A 114 1 N ALA A 114 O SER A 142 SHEET 4 A 8 ALA A 206 GLU A 211 1 O VAL A 208 N LEU A 111 SHEET 5 A 8 TRP A 271 LEU A 274 -1 O TRP A 271 N VAL A 209 SHEET 6 A 8 LEU A 237 SER A 241 -1 N VAL A 240 O LEU A 272 SHEET 7 A 8 ALA A 304 PRO A 308 1 O VAL A 306 N SER A 241 SHEET 8 A 8 LEU A 260 THR A 263 -1 N TYR A 261 O ARG A 307 SHEET 1 B 2 LEU A 214 VAL A 216 0 SHEET 2 B 2 THR A 313 THR A 315 -1 O MET A 314 N GLU A 215 SHEET 1 C 3 GLU A 385 GLN A 389 0 SHEET 2 C 3 ARG A 429 ALA A 434 1 O HIS A 432 N VAL A 388 SHEET 3 C 3 VAL A 422 PHE A 426 -1 N PHE A 424 O VAL A 431 SHEET 1 D 2 LEU A 409 LYS A 410 0 SHEET 2 D 2 VAL A 413 PRO A 414 -1 O VAL A 413 N LYS A 410 SSBOND 1 CYS A 115 CYS A 145 1555 1555 2.03 SSBOND 2 CYS A 239 CYS A 305 1555 1555 2.07 LINK OD2 ASP A 213 MN MN A 448 1555 1555 2.17 LINK MN MN A 448 O1A UDP A 449 1555 1555 2.21 LINK MN MN A 448 O3B UDP A 449 1555 1555 2.24 LINK MN MN A 448 O HOH A 489 1555 1555 2.19 LINK MN MN A 448 O HOH A 528 1555 1555 2.25 LINK MN MN A 448 O HOH A 545 1555 1555 2.25 SITE 1 AC1 5 ASP A 213 UDP A 449 HOH A 489 HOH A 528 SITE 2 AC1 5 HOH A 545 SITE 1 AC2 24 ILE A 113 ALA A 114 CYS A 115 ARG A 117 SITE 2 AC2 24 ASP A 144 CYS A 145 LYS A 186 ILE A 187 SITE 3 AC2 24 HIS A 190 GLU A 211 ASP A 212 ASP A 213 SITE 4 AC2 24 GLY A 320 VAL A 321 SER A 322 MN A 448 SITE 5 AC2 24 GOL A 454 HOH A 490 HOH A 514 HOH A 545 SITE 6 AC2 24 HOH A 657 HOH A 690 HOH A 703 HOH A 715 SITE 1 AC3 6 ARG A 131 PRO A 138 ILE A 139 SER A 159 SITE 2 AC3 6 ALA A 160 THR A 162 SITE 1 AC4 8 TYR A 390 GLY A 412 GLY A 420 TRP A 439 SITE 2 AC4 8 GLY A 441 TYR A 442 ASP A 443 TRP A 446 SITE 1 AC5 7 ASP A 116 PRO A 167 VAL A 321 HOH A 514 SITE 2 AC5 7 HOH A 594 HOH A 607 HOH A 690 SITE 1 AC6 6 PRO A 235 LEU A 237 LEU A 274 ARG A 303 SITE 2 AC6 6 HOH A 484 HOH A 504 SITE 1 AC7 6 TYR A 184 GLU A 211 UDP A 449 HOH A 489 SITE 2 AC7 6 HOH A 596 HOH A 715 CRYST1 40.619 82.029 101.852 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024619 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012191 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009818 0.00000