HEADER HYDROLASE 11-AUG-05 2ANV TITLE CRYSTAL STRUCTURE OF P22 LYSOZYME MUTANT L86M COMPND MOL_ID: 1; COMPND 2 MOLECULE: LYSOZYME; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: LYSIS PROTEIN, MURAMIDASE, ENDOLYSIN; COMPND 5 EC: 3.2.1.17; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE P22; SOURCE 3 ORGANISM_TAXID: 10754; SOURCE 4 GENE: 19; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PHAGE LYSOZYME, DIRECT METHODS, LANTHINIDE BINDING SITES, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR B.H.MOOERS,B.W.MATTHEWS REVDAT 4 14-FEB-24 2ANV 1 REMARK REVDAT 3 20-OCT-21 2ANV 1 REMARK SEQADV LINK REVDAT 2 24-FEB-09 2ANV 1 VERSN REVDAT 1 07-FEB-06 2ANV 0 JRNL AUTH B.H.MOOERS,B.W.MATTHEWS JRNL TITL EXTENSION TO 2268 ATOMS OF DIRECT METHODS IN THE AB INITIO JRNL TITL 2 DETERMINATION OF THE UNKNOWN STRUCTURE OF BACTERIOPHAGE P22 JRNL TITL 3 LYSOZYME. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 62 165 2006 JRNL REFN ISSN 0907-4449 JRNL PMID 16421448 JRNL DOI 10.1107/S0907444905037212 REMARK 2 REMARK 2 RESOLUTION. 1.04 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : SHELXL-97 REMARK 3 AUTHORS : G.M.SHELDRICK REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.04 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (NO CUTOFF). REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : 0.122 REMARK 3 FREE R VALUE (NO CUTOFF) : 0.151 REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : 2.000 REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : 2895 REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 144532 REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL FOR DATA WITH F>4SIG(F). REMARK 3 R VALUE (WORKING + TEST SET, F>4SIG(F)) : NULL REMARK 3 R VALUE (WORKING SET, F>4SIG(F)) : 0.118 REMARK 3 FREE R VALUE (F>4SIG(F)) : 0.147 REMARK 3 FREE R VALUE TEST SET SIZE (%, F>4SIG(F)) : 2.000 REMARK 3 FREE R VALUE TEST SET COUNT (F>4SIG(F)) : 2681 REMARK 3 TOTAL NUMBER OF REFLECTIONS (F>4SIG(F)) : 133406 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2268 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 42 REMARK 3 SOLVENT ATOMS : 482 REMARK 3 REMARK 3 MODEL REFINEMENT. REMARK 3 OCCUPANCY SUM OF NON-HYDROGEN ATOMS : NULL REMARK 3 OCCUPANCY SUM OF HYDROGEN ATOMS : NULL REMARK 3 NUMBER OF DISCRETELY DISORDERED RESIDUES : NULL REMARK 3 NUMBER OF LEAST-SQUARES PARAMETERS : NULL REMARK 3 NUMBER OF RESTRAINTS : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM RESTRAINT TARGET VALUES. REMARK 3 BOND LENGTHS (A) : 0.020 REMARK 3 ANGLE DISTANCES (A) : 0.035 REMARK 3 SIMILAR DISTANCES (NO TARGET VALUES) (A) : NULL REMARK 3 DISTANCES FROM RESTRAINT PLANES (A) : NULL REMARK 3 ZERO CHIRAL VOLUMES (A**3) : 0.083 REMARK 3 NON-ZERO CHIRAL VOLUMES (A**3) : 0.091 REMARK 3 ANTI-BUMPING DISTANCE RESTRAINTS (A) : 0.078 REMARK 3 RIGID-BOND ADP COMPONENTS (A**2) : 0.006 REMARK 3 SIMILAR ADP COMPONENTS (A**2) : 0.053 REMARK 3 APPROXIMATELY ISOTROPIC ADPS (A**2) : 0.094 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED: BABINET REMARK 3 REMARK 3 STEREOCHEMISTRY TARGET VALUES : ENGH & HUBER REMARK 3 SPECIAL CASE: NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2ANV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-AUG-05. REMARK 100 THE DEPOSITION ID IS D_1000034109. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-OCT-04 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9184 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : CRYSTAL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALA, SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 144532 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.040 REMARK 200 RESOLUTION RANGE LOW (A) : 42.100 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 4.400 REMARK 200 R MERGE (I) : 0.05300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 42.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.04 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.08 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.22200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: DIRECT METHODS REMARK 200 SOFTWARE USED: SIR V. 2002 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: AB INITIO STRUCTURE DETERMINATION REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.84 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, PH 7.5, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 276K, PH 7.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 67.00650 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 25.20750 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 67.00650 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 25.20750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3810 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14760 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -103.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9750 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27840 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -232.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 134.01300 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9570 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27800 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -223.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 122.90044 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 45.24223 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 3 1.000000 0.000000 0.000000 -11.11256 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 45.24223 REMARK 350 BIOMT1 4 -1.000000 0.000000 0.000000 134.01300 REMARK 350 BIOMT2 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 SM SM A2904 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP B 69 O HOH B 3225 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER A 146 C SER A 146 O -0.176 REMARK 500 GLU B 68 CD GLU B 68 OE2 -0.069 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 14 NE - CZ - NH2 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG A 14 NE - CZ - NH2 ANGL. DEV. = -4.4 DEGREES REMARK 500 ARG A 19 NE - CZ - NH2 ANGL. DEV. = -4.9 DEGREES REMARK 500 LYS A 21 CB - CG - CD ANGL. DEV. = 15.8 DEGREES REMARK 500 ARG A 106 CD - NE - CZ ANGL. DEV. = 9.2 DEGREES REMARK 500 ARG A 106 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG A 106 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 ARG A 138 NE - CZ - NH1 ANGL. DEV. = -3.5 DEGREES REMARK 500 MET B 1 CA - CB - CG ANGL. DEV. = 11.1 DEGREES REMARK 500 ARG B 19 NE - CZ - NH1 ANGL. DEV. = -3.6 DEGREES REMARK 500 ARG B 27 NE - CZ - NH1 ANGL. DEV. = -3.7 DEGREES REMARK 500 HIS B 36 CG - ND1 - CE1 ANGL. DEV. = 6.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 25 -179.26 -68.94 REMARK 500 VAL A 34 79.78 -112.40 REMARK 500 VAL B 34 79.28 -110.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SM A2904 SM REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 54 OE2 REMARK 620 2 GLU A 54 OE2 156.1 REMARK 620 3 GLU A 58 OE1 113.5 74.4 REMARK 620 4 GLU A 58 OE2 80.9 118.4 51.7 REMARK 620 5 GLU A 58 OE1 74.4 113.5 143.4 97.9 REMARK 620 6 GLU A 58 OE2 118.4 80.9 97.9 79.6 51.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SM A2902 SM REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 62 OE1 REMARK 620 2 GLU A 62 OE2 50.7 REMARK 620 3 GLN A 65 OE1 105.7 64.8 REMARK 620 4 HOH A3807 O 79.1 48.3 84.3 REMARK 620 5 GLN B 65 OE1 157.9 146.2 82.8 122.5 REMARK 620 6 HOH B3195 O 129.9 88.5 72.4 50.8 72.0 REMARK 620 7 HOH B3225 O 61.8 72.9 129.8 46.6 128.1 81.0 REMARK 620 8 HOH B3292 O 73.5 124.2 145.3 128.0 87.9 135.5 81.4 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A2831 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 69 OD1 REMARK 620 2 HOH A4401 O 84.5 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SM B2901 SM REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 129 OD2 REMARK 620 2 ASP A 129 OD1 52.6 REMARK 620 3 ASP A 131 OD2 119.9 76.7 REMARK 620 4 ASP B 129 OD1 83.2 86.1 127.6 REMARK 620 5 ASP B 129 OD2 121.2 83.4 75.3 53.5 REMARK 620 6 ASP B 131 OD1 77.7 128.7 150.4 74.8 117.9 REMARK 620 7 HOH B3014 O 76.8 99.0 82.3 149.8 156.3 79.0 REMARK 620 8 HOH B3048 O 154.9 151.3 76.7 101.8 79.6 79.9 87.9 REMARK 620 N 1 2 3 4 5 6 7 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 606 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 2831 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SM B 2901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SM A 2902 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SM A 2904 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD B 2981 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD B 2982 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD A 2983 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD B 2984 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD A 2985 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD B 2986 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 2991 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 2993 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2ANX RELATED DB: PDB DBREF 2ANV A 1 146 UNP P09963 LYS_BPP22 1 146 DBREF 2ANV B 1 146 UNP P09963 LYS_BPP22 1 146 SEQADV 2ANV MET A 87 UNP P09963 LEU 87 ENGINEERED MUTATION SEQADV 2ANV MET B 87 UNP P09963 LEU 87 ENGINEERED MUTATION SEQRES 1 A 146 MET MET GLN ILE SER SER ASN GLY ILE THR ARG LEU LYS SEQRES 2 A 146 ARG GLU GLU GLY GLU ARG LEU LYS ALA TYR SER ASP SER SEQRES 3 A 146 ARG GLY ILE PRO THR ILE GLY VAL GLY HIS THR GLY LYS SEQRES 4 A 146 VAL ASP GLY ASN SER VAL ALA SER GLY MET THR ILE THR SEQRES 5 A 146 ALA GLU LYS SER SER GLU LEU LEU LYS GLU ASP LEU GLN SEQRES 6 A 146 TRP VAL GLU ASP ALA ILE SER SER LEU VAL ARG VAL PRO SEQRES 7 A 146 LEU ASN GLN ASN GLN TYR ASP ALA MET CYS SER LEU ILE SEQRES 8 A 146 PHE ASN ILE GLY LYS SER ALA PHE ALA GLY SER THR VAL SEQRES 9 A 146 LEU ARG GLN LEU ASN LEU LYS ASN TYR GLN ALA ALA ALA SEQRES 10 A 146 ASP ALA PHE LEU LEU TRP LYS LYS ALA GLY LYS ASP PRO SEQRES 11 A 146 ASP ILE LEU LEU PRO ARG ARG ARG ARG GLU ARG ALA LEU SEQRES 12 A 146 PHE LEU SER SEQRES 1 B 146 MET MET GLN ILE SER SER ASN GLY ILE THR ARG LEU LYS SEQRES 2 B 146 ARG GLU GLU GLY GLU ARG LEU LYS ALA TYR SER ASP SER SEQRES 3 B 146 ARG GLY ILE PRO THR ILE GLY VAL GLY HIS THR GLY LYS SEQRES 4 B 146 VAL ASP GLY ASN SER VAL ALA SER GLY MET THR ILE THR SEQRES 5 B 146 ALA GLU LYS SER SER GLU LEU LEU LYS GLU ASP LEU GLN SEQRES 6 B 146 TRP VAL GLU ASP ALA ILE SER SER LEU VAL ARG VAL PRO SEQRES 7 B 146 LEU ASN GLN ASN GLN TYR ASP ALA MET CYS SER LEU ILE SEQRES 8 B 146 PHE ASN ILE GLY LYS SER ALA PHE ALA GLY SER THR VAL SEQRES 9 B 146 LEU ARG GLN LEU ASN LEU LYS ASN TYR GLN ALA ALA ALA SEQRES 10 B 146 ASP ALA PHE LEU LEU TRP LYS LYS ALA GLY LYS ASP PRO SEQRES 11 B 146 ASP ILE LEU LEU PRO ARG ARG ARG ARG GLU ARG ALA LEU SEQRES 12 B 146 PHE LEU SER HET SO4 A 601 5 HET SO4 A 603 5 HET SO4 A 604 5 HET SO4 A 605 5 HET MG A2831 1 HET SM A2902 1 HET SM A2904 1 HET IOD A2983 1 HET IOD A2985 1 HET CL A2991 2 HET SO4 B 602 5 HET SO4 B 606 5 HET SM B2901 1 HET IOD B2981 1 HET IOD B2982 1 HET IOD B2984 1 HET IOD B2986 1 HET CL B2993 1 HETNAM SO4 SULFATE ION HETNAM MG MAGNESIUM ION HETNAM SM SAMARIUM (III) ION HETNAM IOD IODIDE ION HETNAM CL CHLORIDE ION FORMUL 3 SO4 6(O4 S 2-) FORMUL 7 MG MG 2+ FORMUL 8 SM 3(SM 3+) FORMUL 10 IOD 6(I 1-) FORMUL 12 CL 2(CL 1-) FORMUL 21 HOH *482(H2 O) HELIX 1 1 SER A 5 GLY A 17 1 13 HELIX 2 2 THR A 52 LEU A 64 1 13 HELIX 3 3 LEU A 64 VAL A 75 1 12 HELIX 4 4 ASN A 80 GLY A 95 1 16 HELIX 5 5 GLY A 95 GLY A 101 1 7 HELIX 6 6 SER A 102 LEU A 110 1 9 HELIX 7 7 ASN A 112 PHE A 120 1 9 HELIX 8 8 LEU A 121 TRP A 123 5 3 HELIX 9 9 LEU A 133 SER A 146 1 14 HELIX 10 10 SER B 5 GLY B 17 1 13 HELIX 11 11 THR B 52 LEU B 64 1 13 HELIX 12 12 LEU B 64 VAL B 75 1 12 HELIX 13 13 ASN B 80 GLY B 95 1 16 HELIX 14 14 GLY B 95 GLY B 101 1 7 HELIX 15 15 SER B 102 LEU B 110 1 9 HELIX 16 16 ASN B 112 PHE B 120 1 9 HELIX 17 17 LEU B 121 TRP B 123 5 3 HELIX 18 18 LEU B 133 SER B 146 1 14 SHEET 1 A 2 ARG A 19 SER A 24 0 SHEET 2 A 2 PRO A 30 GLY A 33 -1 O THR A 31 N TYR A 23 SHEET 1 B 2 ARG B 19 SER B 24 0 SHEET 2 B 2 PRO B 30 GLY B 33 -1 O THR B 31 N TYR B 23 LINK OE2 GLU A 54 SM A SM A2904 1555 1555 2.41 LINK OE2 GLU A 54 SM A SM A2904 2656 1555 2.41 LINK OE1 GLU A 58 SM A SM A2904 1555 1555 2.62 LINK OE2 GLU A 58 SM A SM A2904 1555 1555 2.21 LINK OE1 GLU A 58 SM A SM A2904 2656 1555 2.62 LINK OE2 GLU A 58 SM A SM A2904 2656 1555 2.21 LINK OE1 GLU A 62 SM SM A2902 1555 1555 2.42 LINK OE2 GLU A 62 SM SM A2902 1555 1555 2.59 LINK OE1 GLN A 65 SM SM A2902 1555 1555 2.19 LINK OD1 ASP A 69 MG MG A2831 1555 1555 1.87 LINK OD2 ASP A 129 SM SM B2901 4545 1555 2.52 LINK OD1 ASP A 129 SM SM B2901 4545 1555 2.33 LINK OD2 ASP A 131 SM SM B2901 4545 1555 2.18 LINK MG MG A2831 O HOH A4401 1555 1555 2.09 LINK SM SM A2902 O HOH A3807 1555 1555 2.84 LINK SM SM A2902 OE1 GLN B 65 1555 2655 2.21 LINK SM SM A2902 O HOH B3195 1555 2655 2.32 LINK SM SM A2902 O HOH B3225 1555 2655 2.83 LINK SM SM A2902 O HOH B3292 1555 2655 2.01 LINK OD1 ASP B 129 SM SM B2901 1555 1555 2.33 LINK OD2 ASP B 129 SM SM B2901 1555 1555 2.47 LINK OD1 ASP B 131 SM SM B2901 1555 1555 2.20 LINK SM SM B2901 O HOH B3014 1555 1555 2.32 LINK SM SM B2901 O HOH B3048 1555 1555 2.28 SITE 1 AC1 7 PRO A 135 ARG A 139 HOH A3006 HOH A3129 SITE 2 AC1 7 HOH A3160 HOH A3528 HOH B3439 SITE 1 AC2 5 PRO B 135 ARG B 139 HOH B3022 HOH B3137 SITE 2 AC2 5 HOH B3404 SITE 1 AC3 9 THR A 50 LYS A 111 TYR A 113 GLN A 114 SITE 2 AC3 9 HOH A3035 HOH A3041 HOH A3277 HOH A3353 SITE 3 AC3 9 HOH A4290 SITE 1 AC4 5 ARG A 19 LEU A 20 LYS A 21 HOH A3072 SITE 2 AC4 5 HOH B3100 SITE 1 AC5 7 ARG A 11 HOH A3140 HOH A3187 HOH A3212 SITE 2 AC5 7 THR B 52 LYS B 55 CL B2993 SITE 1 AC6 6 ARG A 27 TYR B 23 ASP B 25 SER B 26 SITE 2 AC6 6 HOH B3210 HOH B3227 SITE 1 AC7 2 ASP A 69 HOH A4401 SITE 1 AC8 6 ASP A 129 ASP A 131 ASP B 129 ASP B 131 SITE 2 AC8 6 HOH B3014 HOH B3048 SITE 1 AC9 7 GLU A 62 GLN A 65 HOH A3807 GLN B 65 SITE 2 AC9 7 HOH B3195 HOH B3225 HOH B3292 SITE 1 BC1 3 GLU A 54 GLU A 58 HOH A4158 SITE 1 BC2 2 SER B 24 SER B 47 SITE 1 BC3 2 THR A 10 HOH B3314 SITE 1 BC4 2 SER B 6 LYS B 61 SITE 1 BC5 3 LYS A 111 HOH A4281 LYS B 111 SITE 1 BC6 1 HOH A3098 SITE 1 BC7 3 SER A 26 GLY B 127 HOH B3110 SITE 1 BC8 9 LYS A 39 ASP A 41 LYS A 55 LEU A 59 SITE 2 BC8 9 HOH A3224 MET B 1 SER B 72 HOH B3027 SITE 3 BC8 9 HOH B3053 SITE 1 BC9 4 SO4 A 605 THR B 52 LYS B 55 HOH B3506 CRYST1 134.013 50.415 46.587 90.00 103.80 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007462 0.000000 0.001833 0.00000 SCALE2 0.000000 0.019835 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022103 0.00000