HEADER LYASE 12-AUG-05 2AO4 OBSLTE 14-NOV-06 2AO4 2GZL TITLE STRUCTURE OF 2C-METHYL-D-ERYTHRITOL 2,4-CLYCODIPHOSPHATE TITLE 2 SYNTHASE COMPLEXED WITH A CDP DERIVED FLUORESCENT INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: 2-C-METHYL-D-ERYTHRITOL 2,4-CYCLODIPHOSPHATE COMPND 3 SYNTHASE; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: MECPS, MECDP-SYNTHASE; COMPND 6 EC: 4.6.1.12; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_COMMON: BACTERIA; SOURCE 4 GENE: ISPF, MECS; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_COMMON: BACTERIA; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS ISOPRENOID, LYASE, ISOPRENE BIOSYNTHESIS EXPDTA X-RAY DIFFRACTION AUTHOR C.M.CRANE,J.KAISER,N.L.RAMSDEN,S.LAUW,F.ROHDICH,E.WOLFGANG, AUTHOR 2 W.N.HUNTER,A.BACHER,F.DIEDERICH REVDAT 2 14-NOV-06 2AO4 1 OBSLTE REVDAT 1 28-FEB-06 2AO4 0 JRNL AUTH C.M.CRANE,J.KAISER,N.L.RAMSDEN,S.LAUW,F.ROHDICH, JRNL AUTH 2 W.EISENREICH,W.N.HUNTER,A.BACHER,F.DIEDERICH JRNL TITL FLUORESCENT INHIBITORS FOR ISPF, AN ENZYME IN THE JRNL TITL 2 NON-MEVALONATE PATHWAY FOR ISOPRENOID BIOSYNTHESIS JRNL TITL 3 AND A POTENTIAL TARGET FOR ANTIMALARIAL THERAPY. JRNL REF ANGEW.CHEM.INT.ED.ENGL. V. 45 1069 2006 JRNL REFN ASTM ACIEAY GE ISSN 0570-0833 REMARK 1 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.50 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 16813 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.223 REMARK 3 R VALUE (WORKING SET) : 0.221 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 902 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW : 2.56 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1252 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.00 REMARK 3 BIN R VALUE (WORKING SET) : 0.2990 REMARK 3 BIN FREE R VALUE SET COUNT : 46 REMARK 3 BIN FREE R VALUE : 0.2720 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 ALL ATOMS : 1296 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 52.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.188 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.178 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.128 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.516 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.935 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.909 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1275 ; 0.009 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1732 ; 1.226 ; 2.032 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 158 ; 9.551 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 49 ;37.345 ;23.673 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 202 ;17.541 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;19.204 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 195 ; 0.088 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 944 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 596 ; 0.252 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 864 ; 0.307 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 55 ; 0.143 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 1 ; 0.073 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 59 ; 0.181 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 11 ; 0.140 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 805 ; 1.331 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1240 ; 1.855 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 541 ; 1.519 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 492 ; 2.715 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 0 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 0 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2AO4 COMPLIES WITH FORMAT V. 2.3, 09-JULY-1998 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-SEP-2005. REMARK 100 THE RCSB ID CODE IS RCSB034118. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-NOV-2004 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 5.00 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9330 REMARK 200 MONOCHROMATOR : SILICON REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC Q210 2D REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17715 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 28.500 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 8.60 REMARK 200 R MERGE FOR SHELL (I) : 0.68500 REMARK 200 R SYM FOR SHELL (I) : 0.68500 REMARK 200 FOR SHELL : 2.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1GX1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 82.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 7.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M AMMONIUM SULFATE, 8% PEG 200 REMARK 280 MME, 0.1M SODIUM ACETATE,, PH 5, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 1/2-X,-Y,1/2+Z REMARK 290 3555 -X,1/2+Y,1/2-Z REMARK 290 4555 1/2+X,1/2-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 1/2+Z,1/2-X,-Y REMARK 290 7555 1/2-Z,-X,1/2+Y REMARK 290 8555 -Z,1/2+X,1/2-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,1/2+Z,1/2-X REMARK 290 11555 1/2+Y,1/2-Z,-X REMARK 290 12555 1/2-Y,-Z,1/2+X REMARK 290 13555 1/2+X,1/2+Y,1/2+Z REMARK 290 14555 -X,1/2-Y,Z REMARK 290 15555 1/2-X,Y,-Z REMARK 290 16555 X,-Y,1/2-Z REMARK 290 17555 1/2+Z,1/2+X,1/2+Y REMARK 290 18555 Z,-X,1/2-Y REMARK 290 19555 -Z,1/2-X,Y REMARK 290 20555 1/2-Z,X,-Y REMARK 290 21555 1/2+Y,1/2+Z,1/2+X REMARK 290 22555 1/2-Y,Z,-X REMARK 290 23555 Y,-Z,1/2-X REMARK 290 24555 -Y,1/2-Z,X REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 72.54900 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 72.54900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 72.54900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 72.54900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 72.54900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 72.54900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 72.54900 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 72.54900 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 72.54900 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 72.54900 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 72.54900 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 72.54900 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 72.54900 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 72.54900 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 72.54900 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 72.54900 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 72.54900 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 72.54900 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 72.54900 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 72.54900 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 72.54900 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 72.54900 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 72.54900 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 72.54900 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 72.54900 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 72.54900 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 72.54900 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 72.54900 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 72.54900 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 72.54900 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 72.54900 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 72.54900 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 72.54900 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 72.54900 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 72.54900 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 72.54900 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT REMARK 300 WHICH CONSISTS OF 1 CHAIN(S). SEE REMARK 350 FOR REMARK 300 INFORMATION ON GENERATING THE BIOLOGICAL MOLECULE(S). REMARK 350 REMARK 350 GENERATING THE BIOMOLECULE REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 3 1.000000 0.000000 0.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 158 REMARK 465 LYS A 159 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI REMARK 500 CE1 HIS A 34 O PHE A 68 2.18 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES: ENGH AND HUBER, 1991 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 62 N - CA - C ANGL. DEV. = 7.9 DEGREES REMARK 500 ASP A 63 N - CA - CB ANGL. DEV. = 8.0 DEGREES REMARK 500 PHE A 68 CB - CA - C ANGL. DEV. = -9.1 DEGREES REMARK 500 PHE A 68 N - CA - C ANGL. DEV. = 8.8 DEGREES REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY A 55 ASP A 56 -146.48 REMARK 500 LEU A 60 PHE A 61 146.36 REMARK 500 PHE A 61 PRO A 62 144.15 REMARK 500 ASP A 63 THR A 64 78.54 REMARK 500 THR A 64 ASP A 65 -130.01 REMARK 500 ASP A 65 PRO A 66 -124.53 REMARK 500 ALA A 67 PHE A 68 -146.58 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1GX1 RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH CDP REMARK 900 RELATED ID: 1KNJ RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH C5P AND CDI REMARK 900 RELATED ID: 1U3P RELATED DB: PDB REMARK 900 THE SAME PROTEIN BUT NATIVE REMARK 900 RELATED ID: 2AMT RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH A CDP DERIVED FLUORESCENT REMARK 900 INHIBITOR DBREF 2AO4 A 1 159 UNP P62617 ISPF_ECOLI 1 159 SEQADV 2AO4 LEU A -1 UNP P62617 CLONING ARTIFACT SEQADV 2AO4 GLU A 0 UNP P62617 CLONING ARTIFACT SEQRES 1 A 161 LEU GLU MET ARG ILE GLY HIS GLY PHE ASP VAL HIS ALA SEQRES 2 A 161 PHE GLY GLY GLU GLY PRO ILE ILE ILE GLY GLY VAL ARG SEQRES 3 A 161 ILE PRO TYR GLU LYS GLY LEU LEU ALA HIS SER ASP GLY SEQRES 4 A 161 ASP VAL ALA LEU HIS ALA LEU THR ASP ALA LEU LEU GLY SEQRES 5 A 161 ALA ALA ALA LEU GLY ASP ILE GLY LYS LEU PHE PRO ASP SEQRES 6 A 161 THR ASP PRO ALA PHE LYS GLY ALA ASP SER ARG GLU LEU SEQRES 7 A 161 LEU ARG GLU ALA TRP ARG ARG ILE GLN ALA LYS GLY TYR SEQRES 8 A 161 THR LEU GLY ASN VAL ASP VAL THR ILE ILE ALA GLN ALA SEQRES 9 A 161 PRO LYS MET LEU PRO HIS ILE PRO GLN MET ARG VAL PHE SEQRES 10 A 161 ILE ALA GLU ASP LEU GLY CYS HIS MET ASP ASP VAL ASN SEQRES 11 A 161 VAL LYS ALA THR THR THR GLU LYS LEU GLY PHE THR GLY SEQRES 12 A 161 ARG GLY GLU GLY ILE ALA CYS GLU ALA VAL ALA LEU LEU SEQRES 13 A 161 ILE LYS ALA THR LYS HET ZN 900 1 HET 2AA 901 44 HET GPP 903 19 HETNAM ZN ZINC ION HETNAM 2AA 5'-O-{[({[2-({[5-(DIMETHYLAMINO)NAPHTHALEN-1- HETNAM 2 2AA YL]SULFONYL}AMINO)ETHYL]OXY}PHOSPHINATO) HETNAM 3 2AA OXY]PHOSPHINATO}CYT HETNAM GPP GERANYL DIPHOSPHATE FORMUL 2 ZN ZN 2+ FORMUL 3 2AA C23 H31 N5 O13 P2 S FORMUL 4 GPP C10 H20 O7 P2 FORMUL 5 HOH *44(H2 O1) HELIX 1 1 ASP A 38 ALA A 52 1 15 HELIX 2 2 ASP A 72 LYS A 87 1 16 HELIX 3 3 MET A 105 PRO A 107 5 3 HELIX 4 4 HIS A 108 GLY A 121 1 14 HELIX 5 5 HIS A 123 ASP A 125 5 3 HELIX 6 6 LEU A 137 ARG A 142 1 6 SHEET 1 A 5 GLY A 30 LEU A 31 0 SHEET 2 A 5 GLU A 0 GLY A 13 -1 N GLY A 13 O GLY A 30 SHEET 3 A 5 GLY A 145 LYS A 156 -1 O LEU A 154 N ARG A 2 SHEET 4 A 5 TYR A 89 ILE A 99 -1 N THR A 97 O GLU A 149 SHEET 5 A 5 VAL A 127 THR A 132 1 O LYS A 130 N ILE A 98 SHEET 1 B 2 ILE A 18 ILE A 20 0 SHEET 2 B 2 VAL A 23 ILE A 25 -1 O ILE A 25 N ILE A 18 CISPEP 1 ALA A 102 PRO A 103 0 0.30 CRYST1 145.098 145.098 145.098 90.00 90.00 90.00 I 21 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006892 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006892 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006892 0.00000