HEADER BIOSYNTHETIC PROTEIN 18-AUG-05 2AQJ TITLE THE STRUCTURE OF TRYPTOPHAN 7-HALOGENASE (PRNA) SUGGESTS A MECHANISM TITLE 2 FOR REGIOSELECTIVE CHLORINATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRYPTOPHAN HALOGENASE, PRNA; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS FLUORESCENS; SOURCE 3 ORGANISM_TAXID: 294; SOURCE 4 GENE: PRNA; SOURCE 5 EXPRESSION_SYSTEM: PSEUDOMONAS FLUORESCENS; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 294; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL915; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PPEH14 KEYWDS TRYPTOPHAN 7-HALOGENASE, FLAVIN-DEPENDENT HALOGENASE, HELICAL BUNDLE, KEYWDS 2 SANDWICHED SHEETS, STRUCTURAL GENOMICS, SCOTTISH STRUCTURAL KEYWDS 3 PROTEOMICS FACILITY, SSPF, BIOSYNTHETIC PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.DONG,S.FLECKS,S.UNVERSUCHT,C.HAUPT,K.-H.VAN PEE,J.H.NAISMITH, AUTHOR 2 SCOTTISH STRUCTURAL PROTEOMICS FACILITY (SSPF) REVDAT 3 14-FEB-24 2AQJ 1 REMARK REVDAT 2 24-FEB-09 2AQJ 1 VERSN REVDAT 1 04-OCT-05 2AQJ 0 JRNL AUTH C.DONG,S.FLECKS,S.UNVERSUCHT,C.HAUPT,K.H.VAN PEE, JRNL AUTH 2 J.H.NAISMITH JRNL TITL TRYPTOPHAN 7-HALOGENASE (PRNA) STRUCTURE SUGGESTS A JRNL TITL 2 MECHANISM FOR REGIOSELECTIVE CHLORINATION. JRNL REF SCIENCE V. 309 2216 2005 JRNL REFN ISSN 0036-8075 JRNL PMID 16195462 JRNL DOI 10.1126/SCIENCE.1116510 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH C.DONG,A.KOTZSCH,M.DORWARD,K.-H.VAN PEE,J.H.NAISMITH REMARK 1 TITL CRYSTALLIZATION AND X-RAY DIFFRACTION OF A HALOGENATING REMARK 1 TITL 2 ENZYME, TRYPTOPHAN 7-HALOGENASE, FROM PSEUDOMONAS REMARK 1 TITL 3 FLUORESCENS REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 60 1438 2004 REMARK 1 REFN ISSN 0907-4449 REMARK 1 PMID 15272170 REMARK 1 DOI 10.1107/S0907444904012521 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 54.66 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.1 REMARK 3 NUMBER OF REFLECTIONS : 56573 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.202 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2857 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2748 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 65.88 REMARK 3 BIN R VALUE (WORKING SET) : 0.1940 REMARK 3 BIN FREE R VALUE SET COUNT : 150 REMARK 3 BIN FREE R VALUE : 0.2720 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4162 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 69 REMARK 3 SOLVENT ATOMS : 393 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.52 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.43 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.24000 REMARK 3 B22 (A**2) : 0.24000 REMARK 3 B33 (A**2) : -0.49000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.194 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.111 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.076 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.480 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.953 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4352 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5919 ; 1.478 ; 1.961 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 516 ; 6.099 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 216 ;31.683 ;23.194 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 687 ;13.857 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 35 ;20.862 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 618 ; 0.102 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3394 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2329 ; 0.210 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3021 ; 0.317 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 429 ; 0.158 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 67 ; 0.247 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 25 ; 0.128 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2633 ; 1.099 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4162 ; 1.670 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2053 ; 2.287 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1757 ; 3.371 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 4686 ; 1.512 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 394 ; 6.435 ; 3.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 4231 ; 2.480 ; 3.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 518 REMARK 3 ORIGIN FOR THE GROUP (A): 10.2470 6.7890 20.1430 REMARK 3 T TENSOR REMARK 3 T11: -0.0855 T22: 0.0864 REMARK 3 T33: -0.0991 T12: -0.0125 REMARK 3 T13: -0.0025 T23: -0.0564 REMARK 3 L TENSOR REMARK 3 L11: 2.2919 L22: 0.4174 REMARK 3 L33: 0.8480 L12: -0.7068 REMARK 3 L13: -0.2246 L23: 0.2489 REMARK 3 S TENSOR REMARK 3 S11: 0.0717 S12: -0.3617 S13: -0.0203 REMARK 3 S21: -0.0297 S22: 0.0998 S23: -0.0174 REMARK 3 S31: 0.0273 S32: 0.1469 S33: -0.1714 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2AQJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-SEP-05. REMARK 100 THE DEPOSITION ID IS D_1000034195. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-NOV-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.934, 0.9796, 0.9798, 0.9252 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA, CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 57013 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 54.660 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.300 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.0 REMARK 200 DATA REDUNDANCY : 9.100 REMARK 200 R MERGE (I) : 0.07100 REMARK 200 R SYM (I) : 0.07100 REMARK 200 FOR THE DATA SET : 6.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.20 REMARK 200 R MERGE FOR SHELL (I) : 0.33700 REMARK 200 R SYM FOR SHELL (I) : 0.33700 REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE 2.03, RESOLVE 2.03 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 8% PEG20000, 0.1M MES PH 6.5, 20MM REMARK 280 TRYPTOPHAN, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293 K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 138.01350 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 33.81500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 33.81500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 207.02025 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 33.81500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 33.81500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 69.00675 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 33.81500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 33.81500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 207.02025 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 33.81500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 33.81500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 69.00675 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 138.01350 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 33.81500 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 33.81500 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 69.00675 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 764 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 519 REMARK 465 ASP A 520 REMARK 465 ALA A 521 REMARK 465 GLY A 522 REMARK 465 LEU A 523 REMARK 465 SER A 524 REMARK 465 ARG A 525 REMARK 465 GLY A 526 REMARK 465 GLN A 527 REMARK 465 ARG A 528 REMARK 465 GLY A 529 REMARK 465 PRO A 530 REMARK 465 LYS A 531 REMARK 465 LEU A 532 REMARK 465 ALA A 533 REMARK 465 ALA A 534 REMARK 465 GLN A 535 REMARK 465 GLU A 536 REMARK 465 SER A 537 REMARK 465 LEU A 538 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 794 O HOH A 1069 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 102 CA - CB - CG ANGL. DEV. = -15.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 31 -7.98 74.01 REMARK 500 PHE A 59 -71.07 -96.52 REMARK 500 ALA A 159 -148.38 -136.37 REMARK 500 PRO A 261 43.69 -83.53 REMARK 500 ASP A 310 -5.27 -56.84 REMARK 500 ASN A 330 -121.25 50.33 REMARK 500 PRO A 344 33.66 -77.70 REMARK 500 LEU A 433 -154.19 -86.85 REMARK 500 ARG A 517 134.17 118.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 700 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TRP A 650 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD A 600 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2APG RELATED DB: PDB REMARK 900 THE SAME PROTEIN IN COMPLEX WITH TRYPTOPHAN DBREF 2AQJ A 1 538 UNP P95480 P95480_PSEFL 1 538 SEQRES 1 A 538 MET ASN LYS PRO ILE LYS ASN ILE VAL ILE VAL GLY GLY SEQRES 2 A 538 GLY THR ALA GLY TRP MET ALA ALA SER TYR LEU VAL ARG SEQRES 3 A 538 ALA LEU GLN GLN GLN ALA ASN ILE THR LEU ILE GLU SER SEQRES 4 A 538 ALA ALA ILE PRO ARG ILE GLY VAL GLY GLU ALA THR ILE SEQRES 5 A 538 PRO SER LEU GLN LYS VAL PHE PHE ASP PHE LEU GLY ILE SEQRES 6 A 538 PRO GLU ARG GLU TRP MET PRO GLN VAL ASN GLY ALA PHE SEQRES 7 A 538 LYS ALA ALA ILE LYS PHE VAL ASN TRP ARG LYS SER PRO SEQRES 8 A 538 ASP PRO SER ARG ASP ASP HIS PHE TYR HIS LEU PHE GLY SEQRES 9 A 538 ASN VAL PRO ASN CYS ASP GLY VAL PRO LEU THR HIS TYR SEQRES 10 A 538 TRP LEU ARG LYS ARG GLU GLN GLY PHE GLN GLN PRO MET SEQRES 11 A 538 GLU TYR ALA CYS TYR PRO GLN PRO GLY ALA LEU ASP GLY SEQRES 12 A 538 LYS LEU ALA PRO CYS LEU SER ASP GLY THR ARG GLN MET SEQRES 13 A 538 SER HIS ALA TRP HIS PHE ASP ALA HIS LEU VAL ALA ASP SEQRES 14 A 538 PHE LEU LYS ARG TRP ALA VAL GLU ARG GLY VAL ASN ARG SEQRES 15 A 538 VAL VAL ASP GLU VAL VAL ASP VAL ARG LEU ASN ASN ARG SEQRES 16 A 538 GLY TYR ILE SER ASN LEU LEU THR LYS GLU GLY ARG THR SEQRES 17 A 538 LEU GLU ALA ASP LEU PHE ILE ASP CYS SER GLY MET ARG SEQRES 18 A 538 GLY LEU LEU ILE ASN GLN ALA LEU LYS GLU PRO PHE ILE SEQRES 19 A 538 ASP MET SER ASP TYR LEU LEU CYS ASP SER ALA VAL ALA SEQRES 20 A 538 SER ALA VAL PRO ASN ASP ASP ALA ARG ASP GLY VAL GLU SEQRES 21 A 538 PRO TYR THR SER SER ILE ALA MET ASN SER GLY TRP THR SEQRES 22 A 538 TRP LYS ILE PRO MET LEU GLY ARG PHE GLY SER GLY TYR SEQRES 23 A 538 VAL PHE SER SER HIS PHE THR SER ARG ASP GLN ALA THR SEQRES 24 A 538 ALA ASP PHE LEU LYS LEU TRP GLY LEU SER ASP ASN GLN SEQRES 25 A 538 PRO LEU ASN GLN ILE LYS PHE ARG VAL GLY ARG ASN LYS SEQRES 26 A 538 ARG ALA TRP VAL ASN ASN CYS VAL SER ILE GLY LEU SER SEQRES 27 A 538 SER CYS PHE LEU GLU PRO LEU GLU SER THR GLY ILE TYR SEQRES 28 A 538 PHE ILE TYR ALA ALA LEU TYR GLN LEU VAL LYS HIS PHE SEQRES 29 A 538 PRO ASP THR SER PHE ASP PRO ARG LEU SER ASP ALA PHE SEQRES 30 A 538 ASN ALA GLU ILE VAL HIS MET PHE ASP ASP CYS ARG ASP SEQRES 31 A 538 PHE VAL GLN ALA HIS TYR PHE THR THR SER ARG ASP ASP SEQRES 32 A 538 THR PRO PHE TRP LEU ALA ASN ARG HIS ASP LEU ARG LEU SEQRES 33 A 538 SER ASP ALA ILE LYS GLU LYS VAL GLN ARG TYR LYS ALA SEQRES 34 A 538 GLY LEU PRO LEU THR THR THR SER PHE ASP ASP SER THR SEQRES 35 A 538 TYR TYR GLU THR PHE ASP TYR GLU PHE LYS ASN PHE TRP SEQRES 36 A 538 LEU ASN GLY ASN TYR TYR CYS ILE PHE ALA GLY LEU GLY SEQRES 37 A 538 MET LEU PRO ASP ARG SER LEU PRO LEU LEU GLN HIS ARG SEQRES 38 A 538 PRO GLU SER ILE GLU LYS ALA GLU ALA MET PHE ALA SER SEQRES 39 A 538 ILE ARG ARG GLU ALA GLU ARG LEU ARG THR SER LEU PRO SEQRES 40 A 538 THR ASN TYR ASP TYR LEU ARG SER LEU ARG ASP GLY ASP SEQRES 41 A 538 ALA GLY LEU SER ARG GLY GLN ARG GLY PRO LYS LEU ALA SEQRES 42 A 538 ALA GLN GLU SER LEU HET CL A 700 1 HET TRP A 650 15 HET FAD A 600 53 HETNAM CL CHLORIDE ION HETNAM TRP TRYPTOPHAN HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE FORMUL 2 CL CL 1- FORMUL 3 TRP C11 H12 N2 O2 FORMUL 4 FAD C27 H33 N9 O15 P2 FORMUL 5 HOH *393(H2 O) HELIX 1 1 GLY A 14 LEU A 28 1 15 HELIX 2 2 PRO A 53 PHE A 59 1 7 HELIX 3 3 PHE A 59 GLY A 64 1 6 HELIX 4 4 PRO A 66 MET A 71 1 6 HELIX 5 5 PRO A 72 ASN A 75 5 4 HELIX 6 6 LEU A 114 GLN A 124 1 11 HELIX 7 7 PRO A 129 TYR A 135 1 7 HELIX 8 8 GLN A 137 GLY A 143 1 7 HELIX 9 9 ASP A 163 ARG A 178 1 16 HELIX 10 10 SER A 218 GLY A 222 5 5 HELIX 11 11 ASP A 253 GLY A 258 1 6 HELIX 12 12 SER A 294 GLY A 307 1 14 HELIX 13 13 GLY A 336 SER A 338 5 3 HELIX 14 14 THR A 348 HIS A 363 1 16 HELIX 15 15 ASP A 370 THR A 398 1 29 HELIX 16 16 THR A 404 ASP A 413 1 10 HELIX 17 17 SER A 417 GLY A 430 1 14 HELIX 18 18 ASP A 439 THR A 446 1 8 HELIX 19 19 THR A 446 ASN A 453 1 8 HELIX 20 20 LEU A 456 GLY A 468 1 13 HELIX 21 21 LEU A 475 HIS A 480 5 6 HELIX 22 22 ARG A 481 LEU A 506 1 26 HELIX 23 23 THR A 508 ARG A 517 1 10 SHEET 1 A 6 ASN A 181 VAL A 184 0 SHEET 2 A 6 ASN A 33 GLU A 38 1 N ILE A 34 O ASN A 181 SHEET 3 A 6 ASN A 7 VAL A 11 1 N ILE A 8 O ASN A 33 SHEET 4 A 6 LEU A 213 ASP A 216 1 O ILE A 215 N VAL A 11 SHEET 5 A 6 CYS A 332 SER A 334 1 O VAL A 333 N PHE A 214 SHEET 6 A 6 TRP A 328 VAL A 329 -1 N VAL A 329 O CYS A 332 SHEET 1 B 3 GLU A 49 ALA A 50 0 SHEET 2 B 3 ALA A 159 PHE A 162 -1 O PHE A 162 N GLU A 49 SHEET 3 B 3 ALA A 77 LYS A 79 -1 N LYS A 79 O ALA A 159 SHEET 1 C 7 HIS A 98 LEU A 102 0 SHEET 2 C 7 ALA A 81 VAL A 85 -1 N PHE A 84 O PHE A 99 SHEET 3 C 7 THR A 263 ALA A 267 1 O SER A 265 N VAL A 85 SHEET 4 C 7 GLY A 271 MET A 278 -1 O THR A 273 N ILE A 266 SHEET 5 C 7 ARG A 281 PHE A 288 -1 O VAL A 287 N TRP A 272 SHEET 6 C 7 SER A 244 PRO A 251 -1 N SER A 248 O SER A 284 SHEET 7 C 7 ASN A 315 LYS A 318 -1 O ASN A 315 N ALA A 247 SHEET 1 D 2 ASN A 108 CYS A 109 0 SHEET 2 D 2 VAL A 112 PRO A 113 -1 O VAL A 112 N CYS A 109 SHEET 1 E 3 VAL A 187 LEU A 192 0 SHEET 2 E 3 ILE A 198 THR A 203 -1 O LEU A 202 N ASP A 189 SHEET 3 E 3 THR A 208 LEU A 209 -1 O LEU A 209 N LEU A 201 SHEET 1 F 3 PHE A 233 ASP A 235 0 SHEET 2 F 3 GLY A 322 ASN A 324 -1 O ARG A 323 N ILE A 234 SHEET 3 F 3 CYS A 340 PHE A 341 -1 O PHE A 341 N GLY A 322 SITE 1 AC1 6 PRO A 344 SER A 347 THR A 348 GLY A 349 SITE 2 AC1 6 FAD A 600 HOH A 879 SITE 1 AC2 15 ILE A 52 PRO A 53 HIS A 101 LEU A 102 SITE 2 AC2 15 PHE A 103 GLU A 346 TYR A 443 TYR A 444 SITE 3 AC2 15 GLU A 450 PHE A 454 TRP A 455 ASN A 459 SITE 4 AC2 15 HOH A 705 HOH A 711 HOH A 734 SITE 1 AC3 39 GLY A 12 GLY A 13 GLY A 14 THR A 15 SITE 2 AC3 39 ALA A 16 SER A 39 ILE A 42 ARG A 44 SITE 3 AC3 39 ILE A 45 VAL A 47 GLU A 49 ALA A 50 SITE 4 AC3 39 ASP A 185 GLU A 186 VAL A 187 CYS A 217 SITE 5 AC3 39 SER A 218 GLY A 219 ARG A 221 GLY A 336 SITE 6 AC3 39 LEU A 337 PHE A 341 PRO A 344 GLY A 349 SITE 7 AC3 39 ILE A 350 ILE A 353 CL A 700 HOH A 702 SITE 8 AC3 39 HOH A 704 HOH A 710 HOH A 776 HOH A 785 SITE 9 AC3 39 HOH A 786 HOH A 868 HOH A 872 HOH A 952 SITE 10 AC3 39 HOH A 956 HOH A 970 HOH A 977 CRYST1 67.630 67.630 276.027 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014786 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014786 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003623 0.00000