HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 18-AUG-05 2AR1 TITLE STRUCTURE OF HYPOTHETICAL PROTEIN FROM LEISHMANIA MAJOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LEISHMANIA MAJOR; SOURCE 3 ORGANISM_TAXID: 5664; SOURCE 4 GENE: LMJF36.6870; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET3A KEYWDS STRUCTURAL GENOMICS, PSI, PROTEIN STRUCTURE INITIATIVE, STRUCTURAL KEYWDS 2 GENOMICS OF PATHOGENIC PROTOZOA CONSORTIUM, SGPP, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR T.L.ARAKAKI,E.A.MERRITT,STRUCTURAL GENOMICS OF PATHOGENIC PROTOZOA AUTHOR 2 CONSORTIUM (SGPP) REVDAT 6 03-APR-24 2AR1 1 REMARK REVDAT 5 14-FEB-24 2AR1 1 REMARK SEQADV REVDAT 4 11-OCT-17 2AR1 1 REMARK REVDAT 3 13-JUL-11 2AR1 1 VERSN REVDAT 2 24-FEB-09 2AR1 1 VERSN REVDAT 1 30-AUG-05 2AR1 0 JRNL AUTH T.ARAKAKI,I.LE TRONG,E.PHIZICKY,E.QUARTLEY,G.DETITTA,J.LUFT, JRNL AUTH 2 A.LAURICELLA,L.ANDERSON,O.KALYUZHNIY,E.WORTHEY,P.J.MYLER, JRNL AUTH 3 D.KIM,D.BAKER,W.G.HOL,E.A.MERRITT JRNL TITL STRUCTURE OF LMAJ006129AAA, A HYPOTHETICAL PROTEIN FROM JRNL TITL 2 LEISHMANIA MAJOR. JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 62 175 2006 JRNL REFN ESSN 1744-3091 JRNL PMID 16511295 JRNL DOI 10.1107/S1744309106005902 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REFMAC_5.2.0005 24/04/2001 REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.51 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.9 REMARK 3 NUMBER OF REFLECTIONS : 18995 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.128 REMARK 3 FREE R VALUE TEST SET COUNT : 974 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1238 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 88.95 REMARK 3 BIN R VALUE (WORKING SET) : 0.2660 REMARK 3 BIN FREE R VALUE SET COUNT : 66 REMARK 3 BIN FREE R VALUE : 0.3330 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1297 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 99 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.51700 REMARK 3 B22 (A**2) : 0.39500 REMARK 3 B33 (A**2) : -0.91200 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.103 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.106 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.107 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.425 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.947 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1332 ; 0.021 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1200 ; 0.005 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1796 ; 1.927 ; 1.948 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2791 ; 0.917 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 156 ; 6.669 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 67 ;33.257 ;23.284 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 243 ;14.551 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;16.553 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 190 ; 0.118 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1456 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 284 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 270 ; 0.220 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1232 ; 0.209 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 640 ; 0.184 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 765 ; 0.088 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 75 ; 0.154 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 21 ; 0.201 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 64 ; 0.273 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 22 ; 0.314 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1006 ; 2.559 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 314 ; 0.581 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1268 ; 2.506 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1087 ; 1.228 ; 3.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 655 ; 3.936 ; 4.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1147 ; 1.770 ; 4.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 528 ; 5.175 ; 6.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1704 ; 2.573 ; 6.000 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 7 A 37 REMARK 3 ORIGIN FOR THE GROUP (A): -0.9390 18.5390 14.0850 REMARK 3 T TENSOR REMARK 3 T11: -0.1305 T22: -0.1004 REMARK 3 T33: 0.2169 T12: -0.0055 REMARK 3 T13: 0.0055 T23: 0.0183 REMARK 3 L TENSOR REMARK 3 L11: 1.2296 L22: 2.5726 REMARK 3 L33: 2.4287 L12: -0.0164 REMARK 3 L13: 0.1060 L23: 0.2344 REMARK 3 S TENSOR REMARK 3 S11: -0.0142 S12: 0.1313 S13: 0.0667 REMARK 3 S21: 0.2960 S22: -0.0211 S23: 0.0352 REMARK 3 S31: -0.0082 S32: 0.0551 S33: 0.0354 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 38 A 127 REMARK 3 ORIGIN FOR THE GROUP (A): 0.6110 19.7430 9.7640 REMARK 3 T TENSOR REMARK 3 T11: -0.1596 T22: -0.0710 REMARK 3 T33: 0.2415 T12: -0.0196 REMARK 3 T13: -0.0033 T23: 0.0117 REMARK 3 L TENSOR REMARK 3 L11: 0.8165 L22: 1.2407 REMARK 3 L33: 1.6456 L12: -0.2809 REMARK 3 L13: 0.0737 L23: -0.0268 REMARK 3 S TENSOR REMARK 3 S11: 0.0038 S12: 0.1379 S13: 0.0612 REMARK 3 S21: 0.0852 S22: -0.0399 S23: -0.0591 REMARK 3 S31: -0.0381 S32: 0.0765 S33: 0.0361 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 128 A 163 REMARK 3 ORIGIN FOR THE GROUP (A): -0.6230 16.4720 7.1180 REMARK 3 T TENSOR REMARK 3 T11: -0.1815 T22: -0.0416 REMARK 3 T33: 0.2636 T12: -0.0161 REMARK 3 T13: -0.0025 T23: 0.0089 REMARK 3 L TENSOR REMARK 3 L11: 1.0139 L22: 2.3083 REMARK 3 L33: 4.7760 L12: -0.6775 REMARK 3 L13: 1.2496 L23: 0.2096 REMARK 3 S TENSOR REMARK 3 S11: 0.0081 S12: 0.0848 S13: 0.0616 REMARK 3 S21: 0.0726 S22: 0.0163 S23: -0.0875 REMARK 3 S31: -0.0105 S32: 0.1402 S33: -0.0244 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : NULL REMARK 3 ION PROBE RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2AR1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-AUG-05. REMARK 100 THE DEPOSITION ID IS D_1000034213. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-DEC-04 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18997 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.3 REMARK 200 DATA REDUNDANCY : 2.900 REMARK 200 R MERGE (I) : 0.04100 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.0680 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.65 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.69300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.603 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: LOW RESOLUTION MAD STRUCTURE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 31.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.80 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.0 UL PROTEIN 8.2 MG/ML 1.0 UL REMARK 280 CRYSTALLIZATION BUFFER 2.8 M NA MALONATE, PH 6.0, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 273K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 15.59950 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.30350 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 15.59950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 32.30350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 304 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 325 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -7 REMARK 465 ALA A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 ARG A 3 REMARK 465 LYS A 4 REMARK 465 ARG A 5 REMARK 465 VAL A 6 REMARK 465 LYS A 164 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 116 CB - CG - OD1 ANGL. DEV. = 5.4 DEGREES REMARK 500 ASP A 116 CB - CG - OD2 ANGL. DEV. = -6.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 32 -51.65 72.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: LMAJ006129AAA RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE AUTHOR STATES THAT RESIDUE 139 IS INDEED AN ARG. THERE REMARK 999 IS A SEQUENCE ERROR AT GENBANK DATABASE, GI:68130356. DBREF 2AR1 A 1 164 UNP Q4Q067 Q4Q067_LEIMA 1 164 SEQADV 2AR1 MET A -7 UNP Q4Q067 CLONING ARTIFACT SEQADV 2AR1 ALA A -6 UNP Q4Q067 CLONING ARTIFACT SEQADV 2AR1 HIS A -5 UNP Q4Q067 EXPRESSION TAG SEQADV 2AR1 HIS A -4 UNP Q4Q067 EXPRESSION TAG SEQADV 2AR1 HIS A -3 UNP Q4Q067 EXPRESSION TAG SEQADV 2AR1 HIS A -2 UNP Q4Q067 EXPRESSION TAG SEQADV 2AR1 HIS A -1 UNP Q4Q067 EXPRESSION TAG SEQADV 2AR1 HIS A 0 UNP Q4Q067 EXPRESSION TAG SEQADV 2AR1 ARG A 139 UNP Q4Q067 SER 139 SEE REMARK 999 SEQRES 1 A 172 MET ALA HIS HIS HIS HIS HIS HIS MET SER ARG LYS ARG SEQRES 2 A 172 VAL ARG ALA GLU ASP ILE HIS TYR TRP LEU LEU LYS SER SEQRES 3 A 172 GLU PRO HIS LYS PHE SER ILE ASP ASP LEU ALA LYS GLN SEQRES 4 A 172 LYS THR SER PRO TRP ASP GLY VAL ARG ASN TYR ALA ALA SEQRES 5 A 172 ARG ASN ASN MET ARG ALA MET SER VAL GLY ASP LYS VAL SEQRES 6 A 172 LEU PHE TYR HIS SER ASN THR LYS GLU PRO GLY VAL ALA SEQRES 7 A 172 GLY LEU ALA GLU VAL VAL ARG LEU ALA TYR ASP ASP PHE SEQRES 8 A 172 THR ALA LEU ASP LYS THR SER GLU TYR PHE ASP PRO LYS SEQRES 9 A 172 ALA THR LYS GLU LYS ASN PRO TRP LYS MET VAL ASP VAL SEQRES 10 A 172 LYS PHE VAL ALA ARG TRP ASP THR VAL LEU THR LEU HIS SEQRES 11 A 172 GLU LEU LYS SER ARG ARG GLU LEU GLN LYS MET ALA LEU SEQRES 12 A 172 PHE THR GLN ARG ARG LEU SER VAL GLN PRO VAL SER ALA SEQRES 13 A 172 SER GLU TYR ALA TYR ILE LEU ARG MET ASN GLU GLU GLN SEQRES 14 A 172 GLN ARG LYS HET GOL A 301 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 GOL C3 H8 O3 FORMUL 3 HOH *99(H2 O) HELIX 1 1 SER A 24 LYS A 32 1 9 HELIX 2 2 ASN A 41 MET A 51 1 11 HELIX 3 3 PHE A 83 ASP A 87 5 5 HELIX 4 4 LEU A 121 LYS A 125 1 5 HELIX 5 5 SER A 126 GLN A 131 5 6 HELIX 6 6 MET A 133 GLN A 138 1 6 HELIX 7 7 SER A 147 GLN A 162 1 16 SHEET 1 A 6 THR A 33 PRO A 35 0 SHEET 2 A 6 LYS A 105 THR A 120 -1 O VAL A 109 N SER A 34 SHEET 3 A 6 GLY A 68 ASP A 81 -1 N VAL A 69 O LEU A 119 SHEET 4 A 6 LYS A 56 HIS A 61 -1 N PHE A 59 O ALA A 70 SHEET 5 A 6 TYR A 13 SER A 18 1 N TRP A 14 O LEU A 58 SHEET 6 A 6 VAL A 143 VAL A 146 -1 O GLN A 144 N LEU A 15 SITE 1 AC1 5 SER A 18 PRO A 35 TRP A 36 ASP A 37 SITE 2 AC1 5 TYR A 92 CRYST1 31.199 64.607 72.559 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.032052 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015478 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013782 0.00000