HEADER UNKNOWN FUNCTION 22-AUG-05 2ARZ TITLE CRYSTAL STRUCTURE OF PROTEIN OF UNKNOWN FUNCTION FROM PSEUDOMONAS TITLE 2 AERUGINOSA COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN PA4388; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 208964; SOURCE 4 STRAIN: PAO1; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS HYPOTHETICAL PROTEIN, STRUCTURAL GENOMICS, MCSG, PSEUDOMONAS KEYWDS 2 AERUGINOSA, PSI, PROTEIN STRUCTURE INITIATIVE, MIDWEST CENTER FOR KEYWDS 3 STRUCTURAL GENOMICS, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR B.NOCEK,X.XU,A.SAVCHENKO,A.EDWARDS,A.JOACHIMIAK,MIDWEST CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS (MCSG) REVDAT 4 14-FEB-24 2ARZ 1 REMARK SEQADV REVDAT 3 13-JUL-11 2ARZ 1 VERSN REVDAT 2 24-FEB-09 2ARZ 1 VERSN REVDAT 1 04-OCT-05 2ARZ 0 JRNL AUTH B.NOCEK,X.XU,A.SAVCHENKO,A.EDWARDS,A.JOACHIMIAK JRNL TITL CRYSTAL STRUCTURE OF HYPOTHETICAL PROTEIN FROM PSEUDOMONAS JRNL TITL 2 AERUGINOSA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.56 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 36918 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1946 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2637 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.13 REMARK 3 BIN R VALUE (WORKING SET) : 0.2560 REMARK 3 BIN FREE R VALUE SET COUNT : 145 REMARK 3 BIN FREE R VALUE : 0.3120 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3699 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 15 REMARK 3 SOLVENT ATOMS : 317 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.67 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.09000 REMARK 3 B22 (A**2) : 0.16000 REMARK 3 B33 (A**2) : -0.25000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.175 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.162 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.123 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.218 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.936 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3827 ; 0.015 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5206 ; 1.598 ; 1.933 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 472 ; 7.872 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 188 ;33.472 ;22.447 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 564 ;17.575 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 36 ;18.570 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 545 ; 0.129 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3024 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1664 ; 0.203 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2483 ; 0.303 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 287 ; 0.154 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 34 ; 0.200 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 8 ; 0.353 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2439 ; 0.954 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3744 ; 1.540 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1616 ; 2.347 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1462 ; 3.607 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 239 REMARK 3 ORIGIN FOR THE GROUP (A): 32.8694 49.9839 37.4793 REMARK 3 T TENSOR REMARK 3 T11: -0.0423 T22: -0.0681 REMARK 3 T33: -0.0487 T12: -0.0401 REMARK 3 T13: -0.0297 T23: 0.0036 REMARK 3 L TENSOR REMARK 3 L11: 0.3567 L22: 0.4435 REMARK 3 L33: 0.9898 L12: 0.1451 REMARK 3 L13: 0.2429 L23: -0.0799 REMARK 3 S TENSOR REMARK 3 S11: -0.0059 S12: 0.0008 S13: -0.0165 REMARK 3 S21: 0.0643 S22: -0.0906 S23: -0.0775 REMARK 3 S31: -0.0912 S32: 0.0466 S33: 0.0965 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2 B 239 REMARK 3 ORIGIN FOR THE GROUP (A): 10.7992 28.9785 43.3083 REMARK 3 T TENSOR REMARK 3 T11: -0.0786 T22: -0.0524 REMARK 3 T33: -0.0303 T12: -0.0187 REMARK 3 T13: 0.0103 T23: -0.0034 REMARK 3 L TENSOR REMARK 3 L11: 0.2324 L22: 0.3663 REMARK 3 L33: 0.9183 L12: 0.1937 REMARK 3 L13: -0.2226 L23: -0.3917 REMARK 3 S TENSOR REMARK 3 S11: -0.0196 S12: 0.0450 S13: -0.0214 REMARK 3 S21: 0.0029 S22: 0.0703 S23: 0.0501 REMARK 3 S31: 0.0205 S32: -0.0526 S33: -0.0507 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. OTHER SOFTWARE USED IN THE SOLUTION OF THIS STRUCTRE REMARK 3 INCLUDES SHELXD, SHELXE, MLPHARE, DM, SOLVE/RESOLVE, O, COOT, REMARK 3 AND CCP4 REMARK 4 REMARK 4 2ARZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-SEP-05. REMARK 100 THE DEPOSITION ID IS D_1000034243. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-NOV-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : SBCCOLLECT REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38922 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 10.60 REMARK 200 R MERGE (I) : 0.12300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.0300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1MBIS-TRIS PH6.4, 0.2M CACL2, 16.5% REMARK 280 PEG5K, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 35.63600 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 49.80600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.88750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 49.80600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.63600 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.88750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: X-RAY CRYSTALLOGRAPHY DATA SUGGESTS DIMER REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4220 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20970 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -60.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A -2 REMARK 465 ASN A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 GLU A 240 REMARK 465 PRO A 241 REMARK 465 GLU A 242 REMARK 465 GLN A 243 REMARK 465 GLY A 244 REMARK 465 ARG B 74 REMARK 465 GLY B 75 REMARK 465 ALA B 76 REMARK 465 GLU B 77 REMARK 465 ASP B 78 REMARK 465 ILE B 79 REMARK 465 GLN B 80 REMARK 465 GLU B 240 REMARK 465 PRO B 241 REMARK 465 GLU B 242 REMARK 465 GLN B 243 REMARK 465 GLY B 244 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 268 O HOH B 402 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 ND2 ASN B -1 O HOH B 325 4556 1.87 REMARK 500 O HOH A 2790 O HOH B 402 2564 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLN A 206 N - CA - C ANGL. DEV. = 16.4 DEGREES REMARK 500 LEU B 14 CB - CG - CD1 ANGL. DEV. = 10.2 DEGREES REMARK 500 ARG B 148 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 GLN B 206 N - CA - C ANGL. DEV. = 16.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 114 144.99 -38.76 REMARK 500 ASP A 115 33.26 36.92 REMARK 500 ASP A 121 6.72 -62.02 REMARK 500 ALA A 189 75.51 65.18 REMARK 500 TRP B 28 79.56 -118.24 REMARK 500 ASP B 115 -7.88 69.80 REMARK 500 ASP B 121 59.01 -90.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ARG A 118 VAL A 119 144.05 REMARK 500 GLY A 183 LEU A 184 -38.97 REMARK 500 ALA A 188 ALA A 189 48.50 REMARK 500 ILE A 204 GLY A 205 -56.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 2647 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 2648 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC5551 RELATED DB: TARGETDB DBREF 2ARZ A 1 244 UNP Q9HW16 Q9HW16_PSEAE 1 244 DBREF 2ARZ B 1 244 UNP Q9HW16 Q9HW16_PSEAE 1 244 SEQADV 2ARZ ALA A -2 UNP Q9HW16 CLONING ARTIFACT SEQADV 2ARZ ASN A -1 UNP Q9HW16 CLONING ARTIFACT SEQADV 2ARZ SER A 0 UNP Q9HW16 CLONING ARTIFACT SEQADV 2ARZ ALA B -2 UNP Q9HW16 CLONING ARTIFACT SEQADV 2ARZ ASN B -1 UNP Q9HW16 CLONING ARTIFACT SEQADV 2ARZ SER B 0 UNP Q9HW16 CLONING ARTIFACT SEQRES 1 A 247 ALA ASN SER MET SER VAL GLU ALA ALA LYS ASN ALA ARG SEQRES 2 A 247 GLU LEU LEU LEU LYS GLU TYR ARG ALA VAL LEU SER THR SEQRES 3 A 247 HIS SER LYS LYS TRP PRO GLY PHE PRO PHE GLY SER VAL SEQRES 4 A 247 VAL PRO TYR CYS LEU ASP ALA GLU GLY ARG PRO LEU ILE SEQRES 5 A 247 LEU ILE SER ARG ILE ALA GLN HIS THR HIS ASN LEU GLN SEQRES 6 A 247 ALA ASP PRO ARG CYS SER MET LEU VAL GLY GLU ARG GLY SEQRES 7 A 247 ALA GLU ASP ILE GLN ALA VAL GLY ARG LEU THR LEU LEU SEQRES 8 A 247 ALA GLU ALA ARG GLN LEU ALA GLU GLU GLU VAL ALA ALA SEQRES 9 A 247 ALA ALA GLU ARG TYR TYR ARG TYR PHE PRO GLU SER ALA SEQRES 10 A 247 ASP TYR HIS ARG VAL HIS ASP PHE ASP PHE TRP VAL LEU SEQRES 11 A 247 GLN PRO VAL GLN TRP ARG PHE ILE GLY GLY PHE GLY ALA SEQRES 12 A 247 ILE HIS TRP LEU ALA ALA GLU ARG VAL PRO LEU ALA ASN SEQRES 13 A 247 PRO PHE ALA GLY GLU ALA GLU ARG GLY MET VAL GLU HIS SEQRES 14 A 247 MET ASN SER ASP HIS ALA ALA ALA ILE ALA HIS TYR VAL SEQRES 15 A 247 GLU LEU ALA GLY LEU PRO ALA HIS ALA ALA ALA GLN LEU SEQRES 16 A 247 ALA GLY ILE ASP THR GLU GLY PHE HIS LEU ARG ILE GLY SEQRES 17 A 247 GLN GLY LEU HIS TRP LEU PRO PHE PRO ALA ALA CYS GLY SEQRES 18 A 247 ASN PRO GLY ALA VAL ARG GLN ALA LEU VAL GLN LEU ALA SEQRES 19 A 247 ARG ALA GLU ARG TRP PRO THR VAL GLU PRO GLU GLN GLY SEQRES 1 B 247 ALA ASN SER MET SER VAL GLU ALA ALA LYS ASN ALA ARG SEQRES 2 B 247 GLU LEU LEU LEU LYS GLU TYR ARG ALA VAL LEU SER THR SEQRES 3 B 247 HIS SER LYS LYS TRP PRO GLY PHE PRO PHE GLY SER VAL SEQRES 4 B 247 VAL PRO TYR CYS LEU ASP ALA GLU GLY ARG PRO LEU ILE SEQRES 5 B 247 LEU ILE SER ARG ILE ALA GLN HIS THR HIS ASN LEU GLN SEQRES 6 B 247 ALA ASP PRO ARG CYS SER MET LEU VAL GLY GLU ARG GLY SEQRES 7 B 247 ALA GLU ASP ILE GLN ALA VAL GLY ARG LEU THR LEU LEU SEQRES 8 B 247 ALA GLU ALA ARG GLN LEU ALA GLU GLU GLU VAL ALA ALA SEQRES 9 B 247 ALA ALA GLU ARG TYR TYR ARG TYR PHE PRO GLU SER ALA SEQRES 10 B 247 ASP TYR HIS ARG VAL HIS ASP PHE ASP PHE TRP VAL LEU SEQRES 11 B 247 GLN PRO VAL GLN TRP ARG PHE ILE GLY GLY PHE GLY ALA SEQRES 12 B 247 ILE HIS TRP LEU ALA ALA GLU ARG VAL PRO LEU ALA ASN SEQRES 13 B 247 PRO PHE ALA GLY GLU ALA GLU ARG GLY MET VAL GLU HIS SEQRES 14 B 247 MET ASN SER ASP HIS ALA ALA ALA ILE ALA HIS TYR VAL SEQRES 15 B 247 GLU LEU ALA GLY LEU PRO ALA HIS ALA ALA ALA GLN LEU SEQRES 16 B 247 ALA GLY ILE ASP THR GLU GLY PHE HIS LEU ARG ILE GLY SEQRES 17 B 247 GLN GLY LEU HIS TRP LEU PRO PHE PRO ALA ALA CYS GLY SEQRES 18 B 247 ASN PRO GLY ALA VAL ARG GLN ALA LEU VAL GLN LEU ALA SEQRES 19 B 247 ARG ALA GLU ARG TRP PRO THR VAL GLU PRO GLU GLN GLY HET CL A 401 1 HET CL A 501 1 HET CL A 601 1 HET GOL A2647 6 HET GOL A2648 6 HETNAM CL CHLORIDE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 CL 3(CL 1-) FORMUL 6 GOL 2(C3 H8 O3) FORMUL 8 HOH *317(H2 O) HELIX 1 1 SER A 2 GLU A 16 1 15 HELIX 2 2 ALA A 55 ASP A 64 1 10 HELIX 3 3 ALA A 95 PHE A 110 1 16 HELIX 4 4 PRO A 111 ALA A 114 5 4 HELIX 5 5 GLY A 157 HIS A 171 1 15 HELIX 6 6 HIS A 171 GLY A 183 1 13 HELIX 7 7 ASN A 219 ALA A 233 1 15 HELIX 8 8 ASN B -1 GLU B 16 1 18 HELIX 9 9 ALA B 55 ASP B 64 1 10 HELIX 10 10 ALA B 95 PHE B 110 1 16 HELIX 11 11 PRO B 111 ALA B 114 5 4 HELIX 12 12 ASP B 115 HIS B 120 1 6 HELIX 13 13 GLU B 147 VAL B 149 5 3 HELIX 14 14 GLY B 157 HIS B 171 1 15 HELIX 15 15 HIS B 171 GLY B 183 1 13 HELIX 16 16 ASN B 219 ALA B 233 1 15 SHEET 1 A 7 PRO A 32 PRO A 38 0 SHEET 2 A 7 ARG A 18 HIS A 24 -1 N LEU A 21 O SER A 35 SHEET 3 A 7 ARG A 66 GLY A 72 -1 O LEU A 70 N VAL A 20 SHEET 4 A 7 ARG A 84 GLN A 93 -1 O LEU A 87 N MET A 69 SHEET 5 A 7 PHE A 122 ILE A 135 -1 O ARG A 133 N THR A 86 SHEET 6 A 7 PRO A 47 SER A 52 -1 N ILE A 49 O TRP A 125 SHEET 7 A 7 CYS A 40 LEU A 41 -1 N CYS A 40 O LEU A 48 SHEET 1 B 6 PRO A 32 PRO A 38 0 SHEET 2 B 6 ARG A 18 HIS A 24 -1 N LEU A 21 O SER A 35 SHEET 3 B 6 ARG A 66 GLY A 72 -1 O LEU A 70 N VAL A 20 SHEET 4 B 6 ARG A 84 GLN A 93 -1 O LEU A 87 N MET A 69 SHEET 5 B 6 PHE A 122 ILE A 135 -1 O ARG A 133 N THR A 86 SHEET 6 B 6 ILE A 141 ALA A 145 -1 O HIS A 142 N PHE A 134 SHEET 1 C 3 GLN A 191 ILE A 195 0 SHEET 2 C 3 GLY A 199 ILE A 204 -1 O ARG A 203 N GLN A 191 SHEET 3 C 3 GLY A 207 PRO A 212 -1 O GLY A 207 N ILE A 204 SHEET 1 D 7 PRO B 32 PRO B 38 0 SHEET 2 D 7 ARG B 18 HIS B 24 -1 N LEU B 21 O SER B 35 SHEET 3 D 7 ARG B 66 GLY B 72 -1 O SER B 68 N SER B 22 SHEET 4 D 7 ARG B 84 GLN B 93 -1 O LEU B 85 N VAL B 71 SHEET 5 D 7 PHE B 122 ILE B 135 -1 O VAL B 130 N LEU B 88 SHEET 6 D 7 PRO B 47 SER B 52 -1 N ILE B 51 O ASP B 123 SHEET 7 D 7 CYS B 40 LEU B 41 -1 N CYS B 40 O LEU B 48 SHEET 1 E 6 PRO B 32 PRO B 38 0 SHEET 2 E 6 ARG B 18 HIS B 24 -1 N LEU B 21 O SER B 35 SHEET 3 E 6 ARG B 66 GLY B 72 -1 O SER B 68 N SER B 22 SHEET 4 E 6 ARG B 84 GLN B 93 -1 O LEU B 85 N VAL B 71 SHEET 5 E 6 PHE B 122 ILE B 135 -1 O VAL B 130 N LEU B 88 SHEET 6 E 6 ILE B 141 ALA B 145 -1 O HIS B 142 N PHE B 134 SHEET 1 F 3 GLN B 191 ILE B 195 0 SHEET 2 F 3 GLY B 199 ILE B 204 -1 O ARG B 203 N GLN B 191 SHEET 3 F 3 GLY B 207 PRO B 212 -1 O GLY B 207 N ILE B 204 CISPEP 1 GLN A 206 GLY A 207 0 9.23 CISPEP 2 ALA B -2 ASN B -1 0 -17.37 CISPEP 3 ALA B 81 VAL B 82 0 5.98 CISPEP 4 GLN B 206 GLY B 207 0 27.96 SITE 1 AC1 4 ARG A 84 ARG A 133 SER B 35 VAL B 36 SITE 1 AC2 6 HIS A 24 GLY A 30 PHE A 31 PRO A 32 SITE 2 AC2 6 HOH A2700 HIS B 24 SITE 1 AC3 2 ARG A 133 GLN B 56 SITE 1 AC4 6 ARG A 18 LEU A 70 GOL A2648 HOH A2665 SITE 2 AC4 6 HOH A2707 VAL B 20 SITE 1 AC5 8 VAL A 20 GOL A2647 HOH A2753 HOH A2796 SITE 2 AC5 8 LEU B 70 VAL B 71 GLY B 72 HOH B 282 CRYST1 71.272 79.775 99.612 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014031 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012535 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010039 0.00000