HEADER HYDROLASE 07-SEP-05 2AYN TITLE STRUCTURE OF USP14, A PROTEASOME-ASSOCIATED DEUBIQUITINATING ENZYME COMPND MOL_ID: 1; COMPND 2 MOLECULE: UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 14; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: UBIQUITIN THIOLESTERASE 14, UBIQUITIN-SPECIFIC PROCESSING COMPND 5 PROTEASE 14, DEUBIQUITINATING ENZYME 14; COMPND 6 EC: 3.1.2.15; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: USP14, TGT; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PGEX-2T KEYWDS DEUBIQUITINATING ENZYMES, DUB, USP14, PROTEASOME, ENZYME MECHANISM, KEYWDS 2 HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.HU,P.LI,P.D.JEFFREY,Y.SHI REVDAT 4 14-FEB-24 2AYN 1 REMARK REVDAT 3 24-FEB-09 2AYN 1 VERSN REVDAT 2 15-NOV-05 2AYN 1 JRNL REVDAT 1 18-OCT-05 2AYN 0 JRNL AUTH M.HU,P.LI,L.SONG,P.D.JEFFREY,T.A.CHENOVA,K.D.WILKINSON, JRNL AUTH 2 R.E.COHEN,Y.SHI JRNL TITL STRUCTURE AND MECHANISMS OF THE PROTEASOME-ASSOCIATED JRNL TITL 2 DEUBIQUITINATING ENZYME USP14. JRNL REF EMBO J. V. 24 3747 2005 JRNL REFN ISSN 0261-4189 JRNL PMID 16211010 JRNL DOI 10.1038/SJ.EMBOJ.7600832 REMARK 2 REMARK 2 RESOLUTION. 3.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 99.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 25614 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.261 REMARK 3 FREE R VALUE : 0.322 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 2645 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8163 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.011 REMARK 3 BOND ANGLES (DEGREES) : 1.560 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2AYN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-SEP-05. REMARK 100 THE DEPOSITION ID IS D_1000034459. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-OCT-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X25 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.1, 0.9793, 0.9795, 0.95 REMARK 200 MONOCHROMATOR : MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27320 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.200 REMARK 200 RESOLUTION RANGE LOW (A) : 99.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.30 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MES, AMMONIUM SULFATE, PEG MONOMETHYL REMARK 280 ETHER, PH 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 41.14250 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 83.42600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 60.79100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 83.42600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 41.14250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 60.79100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 90 REMARK 465 MET A 91 REMARK 465 THR A 92 REMARK 465 GLU A 93 REMARK 465 GLU A 94 REMARK 465 GLN A 95 REMARK 465 LEU A 96 REMARK 465 ALA A 97 REMARK 465 SER A 98 REMARK 465 ALA A 99 REMARK 465 ARG A 140 REMARK 465 ALA A 141 REMARK 465 SER A 142 REMARK 465 GLY A 143 REMARK 465 GLU A 144 REMARK 465 MET A 145 REMARK 465 SER A 221 REMARK 465 VAL A 222 REMARK 465 LYS A 223 REMARK 465 GLU A 224 REMARK 465 THR A 225 REMARK 465 ASP A 226 REMARK 465 SER A 227 REMARK 465 SER A 228 REMARK 465 SER A 229 REMARK 465 ALA A 230 REMARK 465 SER A 231 REMARK 465 ALA A 232 REMARK 465 ALA A 233 REMARK 465 THR A 234 REMARK 465 PRO A 235 REMARK 465 SER A 236 REMARK 465 LYS A 237 REMARK 465 LYS A 238 REMARK 465 LYS A 379 REMARK 465 LYS A 380 REMARK 465 VAL A 381 REMARK 465 ASN A 382 REMARK 465 GLN A 383 REMARK 465 GLN A 384 REMARK 465 PRO A 385 REMARK 465 ASN A 386 REMARK 465 THR A 387 REMARK 465 SER A 388 REMARK 465 ASP A 389 REMARK 465 LYS A 390 REMARK 465 LYS A 391 REMARK 465 SER A 392 REMARK 465 SER A 393 REMARK 465 PRO A 394 REMARK 465 GLN A 395 REMARK 465 LYS A 396 REMARK 465 GLU A 397 REMARK 465 VAL A 398 REMARK 465 LYS A 399 REMARK 465 TYR A 400 REMARK 465 ARG A 483 REMARK 465 VAL A 484 REMARK 465 GLU A 485 REMARK 465 ILE A 486 REMARK 465 MET A 487 REMARK 465 GLU A 488 REMARK 465 GLU A 489 REMARK 465 GLU A 490 REMARK 465 SER A 491 REMARK 465 GLU A 492 REMARK 465 GLN A 493 REMARK 465 ASP B 90 REMARK 465 MET B 91 REMARK 465 THR B 92 REMARK 465 GLU B 93 REMARK 465 GLU B 94 REMARK 465 GLN B 95 REMARK 465 LEU B 96 REMARK 465 ALA B 97 REMARK 465 SER B 98 REMARK 465 ALA B 99 REMARK 465 ARG B 140 REMARK 465 ALA B 141 REMARK 465 SER B 142 REMARK 465 GLY B 143 REMARK 465 GLU B 144 REMARK 465 MET B 145 REMARK 465 SER B 221 REMARK 465 VAL B 222 REMARK 465 LYS B 223 REMARK 465 GLU B 224 REMARK 465 THR B 225 REMARK 465 ASP B 226 REMARK 465 SER B 227 REMARK 465 SER B 228 REMARK 465 SER B 229 REMARK 465 ALA B 230 REMARK 465 SER B 231 REMARK 465 ALA B 232 REMARK 465 ALA B 233 REMARK 465 THR B 234 REMARK 465 PRO B 235 REMARK 465 SER B 236 REMARK 465 LYS B 237 REMARK 465 LYS B 238 REMARK 465 LYS B 379 REMARK 465 LYS B 380 REMARK 465 VAL B 381 REMARK 465 ASN B 382 REMARK 465 GLN B 383 REMARK 465 GLN B 384 REMARK 465 PRO B 385 REMARK 465 ASN B 386 REMARK 465 THR B 387 REMARK 465 SER B 388 REMARK 465 ASP B 389 REMARK 465 LYS B 390 REMARK 465 LYS B 391 REMARK 465 SER B 392 REMARK 465 SER B 393 REMARK 465 PRO B 394 REMARK 465 GLN B 395 REMARK 465 LYS B 396 REMARK 465 GLU B 397 REMARK 465 VAL B 398 REMARK 465 LYS B 399 REMARK 465 TYR B 400 REMARK 465 ARG B 483 REMARK 465 VAL B 484 REMARK 465 GLU B 485 REMARK 465 ILE B 486 REMARK 465 MET B 487 REMARK 465 GLU B 488 REMARK 465 GLU B 489 REMARK 465 GLU B 490 REMARK 465 SER B 491 REMARK 465 GLU B 492 REMARK 465 GLN B 493 REMARK 465 ASP C 90 REMARK 465 MET C 91 REMARK 465 THR C 92 REMARK 465 GLU C 93 REMARK 465 GLU C 94 REMARK 465 GLN C 95 REMARK 465 LEU C 96 REMARK 465 ALA C 97 REMARK 465 SER C 98 REMARK 465 ALA C 99 REMARK 465 ARG C 140 REMARK 465 ALA C 141 REMARK 465 SER C 142 REMARK 465 GLY C 143 REMARK 465 GLU C 144 REMARK 465 MET C 145 REMARK 465 SER C 221 REMARK 465 VAL C 222 REMARK 465 LYS C 223 REMARK 465 GLU C 224 REMARK 465 THR C 225 REMARK 465 ASP C 226 REMARK 465 SER C 227 REMARK 465 SER C 228 REMARK 465 SER C 229 REMARK 465 ALA C 230 REMARK 465 SER C 231 REMARK 465 ALA C 232 REMARK 465 ALA C 233 REMARK 465 THR C 234 REMARK 465 PRO C 235 REMARK 465 SER C 236 REMARK 465 LYS C 237 REMARK 465 LYS C 238 REMARK 465 LYS C 379 REMARK 465 LYS C 380 REMARK 465 VAL C 381 REMARK 465 ASN C 382 REMARK 465 GLN C 383 REMARK 465 GLN C 384 REMARK 465 PRO C 385 REMARK 465 ASN C 386 REMARK 465 THR C 387 REMARK 465 SER C 388 REMARK 465 ASP C 389 REMARK 465 LYS C 390 REMARK 465 LYS C 391 REMARK 465 SER C 392 REMARK 465 SER C 393 REMARK 465 PRO C 394 REMARK 465 GLN C 395 REMARK 465 LYS C 396 REMARK 465 GLU C 397 REMARK 465 VAL C 398 REMARK 465 LYS C 399 REMARK 465 TYR C 400 REMARK 465 ARG C 483 REMARK 465 VAL C 484 REMARK 465 GLU C 485 REMARK 465 ILE C 486 REMARK 465 MET C 487 REMARK 465 GLU C 488 REMARK 465 GLU C 489 REMARK 465 GLU C 490 REMARK 465 SER C 491 REMARK 465 GLU C 492 REMARK 465 GLN C 493 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLU B 258 N GLU B 260 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 302 C - N - CA ANGL. DEV. = 9.6 DEGREES REMARK 500 PRO B 302 C - N - CA ANGL. DEV. = 9.5 DEGREES REMARK 500 PRO B 481 C - N - CA ANGL. DEV. = 9.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 126 -70.55 -44.45 REMARK 500 ALA A 136 128.18 -177.63 REMARK 500 ALA A 138 121.40 177.74 REMARK 500 ALA A 148 -70.06 -45.52 REMARK 500 ASP A 163 23.96 -76.02 REMARK 500 LYS A 164 -80.89 -148.13 REMARK 500 THR A 165 -33.29 -22.35 REMARK 500 SER A 166 21.44 46.22 REMARK 500 SER A 167 -68.96 -133.53 REMARK 500 PRO A 171 47.40 -85.67 REMARK 500 GLN A 191 28.23 -150.48 REMARK 500 GLN A 193 120.05 -38.09 REMARK 500 VAL A 209 -73.40 -57.06 REMARK 500 GLN A 212 34.41 -94.52 REMARK 500 LYS A 213 -38.88 -151.74 REMARK 500 THR A 257 -75.23 -42.13 REMARK 500 GLU A 258 102.13 -46.88 REMARK 500 SER A 259 -41.33 -6.34 REMARK 500 GLU A 260 95.69 -31.59 REMARK 500 ASN A 279 113.33 -169.12 REMARK 500 GLN A 280 -80.22 49.64 REMARK 500 GLU A 281 -9.48 -54.96 REMARK 500 LEU A 291 -37.89 -34.58 REMARK 500 GLU A 296 77.88 -108.65 REMARK 500 ARG A 306 139.56 -175.08 REMARK 500 GLU A 336 -118.31 -121.41 REMARK 500 SER A 337 -117.29 -54.31 REMARK 500 VAL A 338 -52.23 -147.71 REMARK 500 ALA A 340 -176.63 -176.68 REMARK 500 GLU A 356 22.61 -59.69 REMARK 500 PHE A 369 -88.29 -58.65 REMARK 500 ARG A 370 -97.79 -10.51 REMARK 500 LYS A 372 17.26 -63.68 REMARK 500 PHE A 373 28.45 -146.83 REMARK 500 ASP A 375 15.71 -67.05 REMARK 500 GLU A 377 -53.04 -134.56 REMARK 500 PRO A 402 82.13 -15.56 REMARK 500 PHE A 405 -95.33 -51.59 REMARK 500 SER A 411 49.81 89.03 REMARK 500 ASN A 412 -109.74 -94.54 REMARK 500 ASN A 413 137.78 174.97 REMARK 500 TYR A 416 -166.70 -105.59 REMARK 500 LEU A 419 97.02 -33.51 REMARK 500 GLN A 420 -73.59 -73.19 REMARK 500 ARG A 428 -67.14 -107.57 REMARK 500 ARG A 441 -33.96 -143.42 REMARK 500 ASP A 444 6.91 54.99 REMARK 500 PHE A 449 60.57 -154.74 REMARK 500 ASP A 450 61.47 -68.48 REMARK 500 ASP A 451 -94.03 72.89 REMARK 500 REMARK 500 THIS ENTRY HAS 156 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 2AYN A 90 493 UNP P54578 UBP14_HUMAN 90 493 DBREF 2AYN B 90 493 UNP P54578 UBP14_HUMAN 90 493 DBREF 2AYN C 90 493 UNP P54578 UBP14_HUMAN 90 493 SEQRES 1 A 404 ASP MET THR GLU GLU GLN LEU ALA SER ALA MET GLU LEU SEQRES 2 A 404 PRO CYS GLY LEU THR ASN LEU GLY ASN THR CYS TYR MET SEQRES 3 A 404 ASN ALA THR VAL GLN CYS ILE ARG SER VAL PRO GLU LEU SEQRES 4 A 404 LYS ASP ALA LEU LYS ARG TYR ALA GLY ALA LEU ARG ALA SEQRES 5 A 404 SER GLY GLU MET ALA SER ALA GLN TYR ILE THR ALA ALA SEQRES 6 A 404 LEU ARG ASP LEU PHE ASP SER MET ASP LYS THR SER SER SEQRES 7 A 404 SER ILE PRO PRO ILE ILE LEU LEU GLN PHE LEU HIS MET SEQRES 8 A 404 ALA PHE PRO GLN PHE ALA GLU LYS GLY GLU GLN GLY GLN SEQRES 9 A 404 TYR LEU GLN GLN ASP ALA ASN GLU CYS TRP ILE GLN MET SEQRES 10 A 404 MET ARG VAL LEU GLN GLN LYS LEU GLU ALA ILE GLU ASP SEQRES 11 A 404 ASP SER VAL LYS GLU THR ASP SER SER SER ALA SER ALA SEQRES 12 A 404 ALA THR PRO SER LYS LYS LYS SER LEU ILE ASP GLN PHE SEQRES 13 A 404 PHE GLY VAL GLU PHE GLU THR THR MET LYS CYS THR GLU SEQRES 14 A 404 SER GLU GLU GLU GLU VAL THR LYS GLY LYS GLU ASN GLN SEQRES 15 A 404 LEU GLN LEU SER CYS PHE ILE ASN GLN GLU VAL LYS TYR SEQRES 16 A 404 LEU PHE THR GLY LEU LYS LEU ARG LEU GLN GLU GLU ILE SEQRES 17 A 404 THR LYS GLN SER PRO THR LEU GLN ARG ASN ALA LEU TYR SEQRES 18 A 404 ILE LYS SER SER LYS ILE SER ARG LEU PRO ALA TYR LEU SEQRES 19 A 404 THR ILE GLN MET VAL ARG PHE PHE TYR LYS GLU LYS GLU SEQRES 20 A 404 SER VAL ASN ALA LYS VAL LEU LYS ASP VAL LYS PHE PRO SEQRES 21 A 404 LEU MET LEU ASP MET TYR GLU LEU CYS THR PRO GLU LEU SEQRES 22 A 404 GLN GLU LYS MET VAL SER PHE ARG SER LYS PHE LYS ASP SEQRES 23 A 404 LEU GLU ASP LYS LYS VAL ASN GLN GLN PRO ASN THR SER SEQRES 24 A 404 ASP LYS LYS SER SER PRO GLN LYS GLU VAL LYS TYR GLU SEQRES 25 A 404 PRO PHE SER PHE ALA ASP ASP ILE GLY SER ASN ASN CYS SEQRES 26 A 404 GLY TYR TYR ASP LEU GLN ALA VAL LEU THR HIS GLN GLY SEQRES 27 A 404 ARG SER SER SER SER GLY HIS TYR VAL SER TRP VAL LYS SEQRES 28 A 404 ARG LYS GLN ASP GLU TRP ILE LYS PHE ASP ASP ASP LYS SEQRES 29 A 404 VAL SER ILE VAL THR PRO GLU ASP ILE LEU ARG LEU SER SEQRES 30 A 404 GLY GLY GLY ASP TRP HIS ILE ALA TYR VAL LEU LEU TYR SEQRES 31 A 404 GLY PRO ARG ARG VAL GLU ILE MET GLU GLU GLU SER GLU SEQRES 32 A 404 GLN SEQRES 1 B 404 ASP MET THR GLU GLU GLN LEU ALA SER ALA MET GLU LEU SEQRES 2 B 404 PRO CYS GLY LEU THR ASN LEU GLY ASN THR CYS TYR MET SEQRES 3 B 404 ASN ALA THR VAL GLN CYS ILE ARG SER VAL PRO GLU LEU SEQRES 4 B 404 LYS ASP ALA LEU LYS ARG TYR ALA GLY ALA LEU ARG ALA SEQRES 5 B 404 SER GLY GLU MET ALA SER ALA GLN TYR ILE THR ALA ALA SEQRES 6 B 404 LEU ARG ASP LEU PHE ASP SER MET ASP LYS THR SER SER SEQRES 7 B 404 SER ILE PRO PRO ILE ILE LEU LEU GLN PHE LEU HIS MET SEQRES 8 B 404 ALA PHE PRO GLN PHE ALA GLU LYS GLY GLU GLN GLY GLN SEQRES 9 B 404 TYR LEU GLN GLN ASP ALA ASN GLU CYS TRP ILE GLN MET SEQRES 10 B 404 MET ARG VAL LEU GLN GLN LYS LEU GLU ALA ILE GLU ASP SEQRES 11 B 404 ASP SER VAL LYS GLU THR ASP SER SER SER ALA SER ALA SEQRES 12 B 404 ALA THR PRO SER LYS LYS LYS SER LEU ILE ASP GLN PHE SEQRES 13 B 404 PHE GLY VAL GLU PHE GLU THR THR MET LYS CYS THR GLU SEQRES 14 B 404 SER GLU GLU GLU GLU VAL THR LYS GLY LYS GLU ASN GLN SEQRES 15 B 404 LEU GLN LEU SER CYS PHE ILE ASN GLN GLU VAL LYS TYR SEQRES 16 B 404 LEU PHE THR GLY LEU LYS LEU ARG LEU GLN GLU GLU ILE SEQRES 17 B 404 THR LYS GLN SER PRO THR LEU GLN ARG ASN ALA LEU TYR SEQRES 18 B 404 ILE LYS SER SER LYS ILE SER ARG LEU PRO ALA TYR LEU SEQRES 19 B 404 THR ILE GLN MET VAL ARG PHE PHE TYR LYS GLU LYS GLU SEQRES 20 B 404 SER VAL ASN ALA LYS VAL LEU LYS ASP VAL LYS PHE PRO SEQRES 21 B 404 LEU MET LEU ASP MET TYR GLU LEU CYS THR PRO GLU LEU SEQRES 22 B 404 GLN GLU LYS MET VAL SER PHE ARG SER LYS PHE LYS ASP SEQRES 23 B 404 LEU GLU ASP LYS LYS VAL ASN GLN GLN PRO ASN THR SER SEQRES 24 B 404 ASP LYS LYS SER SER PRO GLN LYS GLU VAL LYS TYR GLU SEQRES 25 B 404 PRO PHE SER PHE ALA ASP ASP ILE GLY SER ASN ASN CYS SEQRES 26 B 404 GLY TYR TYR ASP LEU GLN ALA VAL LEU THR HIS GLN GLY SEQRES 27 B 404 ARG SER SER SER SER GLY HIS TYR VAL SER TRP VAL LYS SEQRES 28 B 404 ARG LYS GLN ASP GLU TRP ILE LYS PHE ASP ASP ASP LYS SEQRES 29 B 404 VAL SER ILE VAL THR PRO GLU ASP ILE LEU ARG LEU SER SEQRES 30 B 404 GLY GLY GLY ASP TRP HIS ILE ALA TYR VAL LEU LEU TYR SEQRES 31 B 404 GLY PRO ARG ARG VAL GLU ILE MET GLU GLU GLU SER GLU SEQRES 32 B 404 GLN SEQRES 1 C 404 ASP MET THR GLU GLU GLN LEU ALA SER ALA MET GLU LEU SEQRES 2 C 404 PRO CYS GLY LEU THR ASN LEU GLY ASN THR CYS TYR MET SEQRES 3 C 404 ASN ALA THR VAL GLN CYS ILE ARG SER VAL PRO GLU LEU SEQRES 4 C 404 LYS ASP ALA LEU LYS ARG TYR ALA GLY ALA LEU ARG ALA SEQRES 5 C 404 SER GLY GLU MET ALA SER ALA GLN TYR ILE THR ALA ALA SEQRES 6 C 404 LEU ARG ASP LEU PHE ASP SER MET ASP LYS THR SER SER SEQRES 7 C 404 SER ILE PRO PRO ILE ILE LEU LEU GLN PHE LEU HIS MET SEQRES 8 C 404 ALA PHE PRO GLN PHE ALA GLU LYS GLY GLU GLN GLY GLN SEQRES 9 C 404 TYR LEU GLN GLN ASP ALA ASN GLU CYS TRP ILE GLN MET SEQRES 10 C 404 MET ARG VAL LEU GLN GLN LYS LEU GLU ALA ILE GLU ASP SEQRES 11 C 404 ASP SER VAL LYS GLU THR ASP SER SER SER ALA SER ALA SEQRES 12 C 404 ALA THR PRO SER LYS LYS LYS SER LEU ILE ASP GLN PHE SEQRES 13 C 404 PHE GLY VAL GLU PHE GLU THR THR MET LYS CYS THR GLU SEQRES 14 C 404 SER GLU GLU GLU GLU VAL THR LYS GLY LYS GLU ASN GLN SEQRES 15 C 404 LEU GLN LEU SER CYS PHE ILE ASN GLN GLU VAL LYS TYR SEQRES 16 C 404 LEU PHE THR GLY LEU LYS LEU ARG LEU GLN GLU GLU ILE SEQRES 17 C 404 THR LYS GLN SER PRO THR LEU GLN ARG ASN ALA LEU TYR SEQRES 18 C 404 ILE LYS SER SER LYS ILE SER ARG LEU PRO ALA TYR LEU SEQRES 19 C 404 THR ILE GLN MET VAL ARG PHE PHE TYR LYS GLU LYS GLU SEQRES 20 C 404 SER VAL ASN ALA LYS VAL LEU LYS ASP VAL LYS PHE PRO SEQRES 21 C 404 LEU MET LEU ASP MET TYR GLU LEU CYS THR PRO GLU LEU SEQRES 22 C 404 GLN GLU LYS MET VAL SER PHE ARG SER LYS PHE LYS ASP SEQRES 23 C 404 LEU GLU ASP LYS LYS VAL ASN GLN GLN PRO ASN THR SER SEQRES 24 C 404 ASP LYS LYS SER SER PRO GLN LYS GLU VAL LYS TYR GLU SEQRES 25 C 404 PRO PHE SER PHE ALA ASP ASP ILE GLY SER ASN ASN CYS SEQRES 26 C 404 GLY TYR TYR ASP LEU GLN ALA VAL LEU THR HIS GLN GLY SEQRES 27 C 404 ARG SER SER SER SER GLY HIS TYR VAL SER TRP VAL LYS SEQRES 28 C 404 ARG LYS GLN ASP GLU TRP ILE LYS PHE ASP ASP ASP LYS SEQRES 29 C 404 VAL SER ILE VAL THR PRO GLU ASP ILE LEU ARG LEU SER SEQRES 30 C 404 GLY GLY GLY ASP TRP HIS ILE ALA TYR VAL LEU LEU TYR SEQRES 31 C 404 GLY PRO ARG ARG VAL GLU ILE MET GLU GLU GLU SER GLU SEQRES 32 C 404 GLN HELIX 1 1 THR A 112 SER A 124 1 13 HELIX 2 2 VAL A 125 ARG A 134 1 10 HELIX 3 3 ALA A 146 SER A 166 1 21 HELIX 4 4 PRO A 171 PHE A 182 1 12 HELIX 5 5 PRO A 183 GLU A 187 5 5 HELIX 6 6 ASP A 198 GLN A 212 1 15 HELIX 7 7 SER A 240 PHE A 246 1 7 HELIX 8 8 TYR A 284 ARG A 292 1 9 HELIX 9 9 TYR A 355 CYS A 358 5 4 HELIX 10 10 THR A 359 MET A 366 1 8 HELIX 11 11 ARG A 370 LYS A 374 5 5 HELIX 12 12 THR A 458 LEU A 463 1 6 HELIX 13 13 ARG A 464 GLY A 467 5 4 HELIX 14 14 THR B 112 SER B 124 1 13 HELIX 15 15 VAL B 125 ARG B 134 1 10 HELIX 16 16 ALA B 146 ASP B 163 1 18 HELIX 17 17 PRO B 171 PHE B 182 1 12 HELIX 18 18 PRO B 183 GLU B 187 5 5 HELIX 19 19 ASP B 198 GLN B 212 1 15 HELIX 20 20 LEU B 241 PHE B 246 1 6 HELIX 21 21 TYR B 284 ARG B 292 1 9 HELIX 22 22 TYR B 355 CYS B 358 5 4 HELIX 23 23 THR B 359 MET B 366 1 8 HELIX 24 24 ARG B 370 LYS B 374 5 5 HELIX 25 25 THR B 458 LEU B 463 1 6 HELIX 26 26 ARG B 464 GLY B 467 5 4 HELIX 27 27 THR C 112 SER C 124 1 13 HELIX 28 28 VAL C 125 ARG C 134 1 10 HELIX 29 29 ALA C 146 SER C 166 1 21 HELIX 30 30 PRO C 171 PHE C 182 1 12 HELIX 31 31 ASP C 198 GLN C 212 1 15 HELIX 32 32 SER C 240 GLY C 247 1 8 HELIX 33 33 TYR C 284 ARG C 292 1 9 HELIX 34 34 TYR C 355 CYS C 358 5 4 HELIX 35 35 THR C 359 MET C 366 1 8 HELIX 36 36 PHE C 369 LYS C 374 5 6 HELIX 37 37 THR C 458 LEU C 463 1 6 HELIX 38 38 ARG C 464 GLY C 467 5 4 SHEET 1 A 2 GLY A 105 LEU A 106 0 SHEET 2 A 2 SER A 168 ILE A 169 1 O ILE A 169 N GLY A 105 SHEET 1 B 4 LYS A 268 GLN A 271 0 SHEET 2 B 4 VAL A 248 CYS A 256 -1 N PHE A 250 O GLU A 269 SHEET 3 B 4 TYR A 310 ARG A 318 -1 O LYS A 315 N GLU A 251 SHEET 4 B 4 GLN A 294 GLU A 295 -1 N GLU A 295 O LYS A 312 SHEET 1 C 5 LEU A 274 PHE A 277 0 SHEET 2 C 5 LEU A 323 VAL A 328 1 O THR A 324 N LEU A 274 SHEET 3 C 5 ILE A 473 GLY A 480 -1 O LEU A 477 N ILE A 325 SHEET 4 C 5 TYR A 416 GLN A 426 -1 N ASP A 418 O GLY A 480 SHEET 5 C 5 MET A 351 ASP A 353 -1 N LEU A 352 O TYR A 417 SHEET 1 D 6 LEU A 274 PHE A 277 0 SHEET 2 D 6 LEU A 323 VAL A 328 1 O THR A 324 N LEU A 274 SHEET 3 D 6 ILE A 473 GLY A 480 -1 O LEU A 477 N ILE A 325 SHEET 4 D 6 TYR A 416 GLN A 426 -1 N ASP A 418 O GLY A 480 SHEET 5 D 6 HIS A 434 LYS A 442 -1 O HIS A 434 N GLN A 426 SHEET 6 D 6 GLU A 445 PHE A 449 -1 O ILE A 447 N VAL A 439 SHEET 1 E 2 GLN A 300 SER A 301 0 SHEET 2 E 2 ARG A 306 ASN A 307 -1 O ARG A 306 N SER A 301 SHEET 1 F 2 GLY B 105 LEU B 106 0 SHEET 2 F 2 SER B 168 ILE B 169 1 O ILE B 169 N GLY B 105 SHEET 1 G 4 LYS B 268 GLN B 271 0 SHEET 2 G 4 VAL B 248 CYS B 256 -1 N PHE B 250 O GLU B 269 SHEET 3 G 4 TYR B 310 ARG B 318 -1 O ILE B 311 N LYS B 255 SHEET 4 G 4 GLN B 294 GLU B 295 -1 N GLU B 295 O LYS B 312 SHEET 1 H 5 GLN B 273 PHE B 277 0 SHEET 2 H 5 LEU B 323 VAL B 328 1 O THR B 324 N LEU B 274 SHEET 3 H 5 ILE B 473 GLY B 480 -1 O LEU B 477 N ILE B 325 SHEET 4 H 5 TYR B 416 GLN B 426 -1 N ASP B 418 O GLY B 480 SHEET 5 H 5 MET B 351 ASP B 353 -1 N LEU B 352 O TYR B 417 SHEET 1 I 6 GLN B 273 PHE B 277 0 SHEET 2 I 6 LEU B 323 VAL B 328 1 O THR B 324 N LEU B 274 SHEET 3 I 6 ILE B 473 GLY B 480 -1 O LEU B 477 N ILE B 325 SHEET 4 I 6 TYR B 416 GLN B 426 -1 N ASP B 418 O GLY B 480 SHEET 5 I 6 HIS B 434 LYS B 442 -1 O LYS B 440 N GLN B 420 SHEET 6 I 6 GLU B 445 PHE B 449 -1 O ILE B 447 N VAL B 439 SHEET 1 J 2 GLY C 105 LEU C 106 0 SHEET 2 J 2 SER C 168 ILE C 169 1 O ILE C 169 N GLY C 105 SHEET 1 K 4 LYS C 268 GLN C 271 0 SHEET 2 K 4 VAL C 248 CYS C 256 -1 N PHE C 250 O GLU C 269 SHEET 3 K 4 TYR C 310 ARG C 318 -1 O ILE C 311 N LYS C 255 SHEET 4 K 4 GLN C 294 GLU C 295 -1 N GLU C 295 O LYS C 312 SHEET 1 L 5 GLN C 273 CYS C 276 0 SHEET 2 L 5 LEU C 323 MET C 327 1 O THR C 324 N LEU C 274 SHEET 3 L 5 ILE C 473 GLY C 480 -1 O LEU C 477 N ILE C 325 SHEET 4 L 5 TYR C 416 GLN C 426 -1 N ASP C 418 O GLY C 480 SHEET 5 L 5 MET C 351 ASP C 353 -1 N LEU C 352 O TYR C 417 SHEET 1 M 6 GLN C 273 CYS C 276 0 SHEET 2 M 6 LEU C 323 MET C 327 1 O THR C 324 N LEU C 274 SHEET 3 M 6 ILE C 473 GLY C 480 -1 O LEU C 477 N ILE C 325 SHEET 4 M 6 TYR C 416 GLN C 426 -1 N ASP C 418 O GLY C 480 SHEET 5 M 6 HIS C 434 LYS C 442 -1 O LYS C 440 N GLN C 420 SHEET 6 M 6 GLU C 445 PHE C 449 -1 O GLU C 445 N LYS C 442 CRYST1 82.285 121.582 166.852 90.00 90.00 90.00 P 21 21 21 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012153 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008225 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005993 0.00000