HEADER ELECTRON TRANSPORT PROTEIN(CUPROPROTEIN)14-OCT-86 2AZA TITLE STRUCTURE OF AZURIN FROM ALCALIGENES DENITRIFICANS. REFINEMENT AT 1.8 TITLE 2 ANGSTROMS RESOLUTION AND COMPARISON OF THE TWO CRYSTALLOGRAPHICALLY TITLE 3 INDEPENDENT MOLECULES COMPND MOL_ID: 1; COMPND 2 MOLECULE: AZURIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACHROMOBACTER XYLOSOXIDANS; SOURCE 3 ORGANISM_TAXID: 85698 KEYWDS ELECTRON TRANSPORT PROTEIN(CUPROPROTEIN) EXPDTA X-RAY DIFFRACTION AUTHOR E.N.BAKER,G.E.NORRIS REVDAT 7 29-NOV-17 2AZA 1 HELIX REVDAT 6 24-FEB-09 2AZA 1 VERSN REVDAT 5 01-APR-03 2AZA 1 JRNL REVDAT 4 15-JAN-90 2AZA 1 SHEET REVDAT 3 09-JAN-89 2AZA 1 JRNL REVDAT 2 06-MAR-87 2AZA 3 ATOM HETATM TER REVDAT 1 15-JAN-87 2AZA 0 SPRSDE 15-JAN-87 2AZA 1AZA JRNL AUTH E.N.BAKER JRNL TITL STRUCTURE OF AZURIN FROM ALCALIGENES DENITRIFICANS JRNL TITL 2 REFINEMENT AT 1.8 A RESOLUTION AND COMPARISON OF THE TWO JRNL TITL 3 CRYSTALLOGRAPHICALLY INDEPENDENT MOLECULES. JRNL REF J.MOL.BIOL. V. 203 1071 1988 JRNL REFN ISSN 0022-2836 JRNL PMID 3210236 JRNL DOI 10.1016/0022-2836(88)90129-5 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH G.E.NORRIS,B.F.ANDERSON,E.N.BAKER REMARK 1 TITL BLUE COPPER PROTEINS. THE COPPER SITE IN AZURIN FROM REMARK 1 TITL 2 ALCALIGENES DENITRIFICANS REMARK 1 REF J.AM.CHEM.SOC. V. 108 2784 1986 REMARK 1 REFN ISSN 0002-7863 REMARK 1 REFERENCE 2 REMARK 1 AUTH G.E.NORRIS,B.F.ANDERSON,E.N.BAKER REMARK 1 TITL STRUCTURE OF AZURIN FROM ALCALIGENES DENITRIFICANS AT 2.5 REMARK 1 TITL 2 ANGSTROMS RESOLUTION REMARK 1 REF J.MOL.BIOL. V. 165 501 1983 REMARK 1 REFN ISSN 0022-2836 REMARK 1 REFERENCE 3 REMARK 1 AUTH G.E.NORRIS,B.F.ANDERSON,E.N.BAKER,S.V.RUMBALL REMARK 1 TITL PURIFICATION AND PRELIMINARY CRYSTALLOGRAPHIC STUDIES ON REMARK 1 TITL 2 AZURIN AND CYTOCHROME C(PRIME) FROM ALCALIGENES REMARK 1 TITL 3 DENITRIFICANS AND ALCALIGENES SP. NCIB 11015 REMARK 1 REF J.MOL.BIOL. V. 135 309 1979 REMARK 1 REFN ISSN 0022-2836 REMARK 1 REFERENCE 4 REMARK 1 AUTH R.P.AMBLER REMARK 1 EDIT A.PREVIERO, J.-F.PECHERE, C.PREVIERO REMARK 1 REF RECENT DEVELOPMENTS IN THE 289 1971 REMARK 1 REF 2 CHEMICAL STUDY OF PROTEIN REMARK 1 REF 3 STRUCTURES REMARK 1 PUBL INSERM, PARIS REMARK 1 REFN ISSN 0-08-022623-X REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TNT REMARK 3 AUTHORS : TRONRUD,TEN EYCK,MATTHEWS REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : NULL REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 21980 REMARK 3 REMARK 3 USING DATA ABOVE SIGMA CUTOFF. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.157 REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 USING ALL DATA, NO SIGMA CUTOFF. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1952 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 13 REMARK 3 SOLVENT ATOMS : 281 REMARK 3 REMARK 3 WILSON B VALUE (FROM FCALC, A**2) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. RMS WEIGHT COUNT REMARK 3 BOND LENGTHS (A) : 0.016 ; NULL ; NULL REMARK 3 BOND ANGLES (DEGREES) : 2.900 ; NULL ; NULL REMARK 3 TORSION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 TRIGONAL CARBON PLANES (A) : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES (A) : NULL ; NULL ; NULL REMARK 3 ISOTROPIC THERMAL FACTORS (A**2) : NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS (A) : NULL ; NULL ; NULL REMARK 3 REMARK 3 INCORRECT CHIRAL-CENTERS (COUNT) : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 RESTRAINT LIBRARIES. REMARK 3 STEREOCHEMISTRY : NULL REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 ONLY INTERNAL H-BONDS INVOLVING SIDE CHAINS OR REMARK 3 CROSSLINKING H BONDS BETWEEN STRANDS ARE PRESENTED ON THE REMARK 3 CONECT RECORDS BELOW. REMARK 4 REMARK 4 2AZA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000177802. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.24 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 49.75000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 49.75000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 37.50000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 37.10000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 37.50000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 37.10000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 49.75000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 37.50000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 37.10000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 49.75000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 37.50000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 37.10000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE TRANSFORMATION PROVIDED ON THE *MTRIX* RECORDS BELOW REMARK 300 WILL PRODUCE APPROXIMATE COORDINATES FOR MOLECULE 1 (CHAIN REMARK 300 INDICATOR *A*) WHEN APPLIED TO THE COORDINATES OF MOLECULE REMARK 300 2 (CHAIN INDICATOR *B*). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 S SO4 A 136 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 240 LIES ON A SPECIAL POSITION. REMARK 400 REMARK 400 COMPOUND REMARK 400 TURNS 3A AND 12A (AND 3B AND 12B) ARE MORE LIKE ALPHA-TURNS REMARK 400 AS THEY HAVE GOOD 1-5 H-BONDS (O ALA 40 - N MET 44 AND REMARK 400 O HIS 117 - N MET 121) WHICH ARE SHORTER THAN THE 1-4 REMARK 400 H-BONDS (O ALA 40 - MET 43 AND 0 HIS 117 - N MET 120). REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 174 O HOH B 237 1.70 REMARK 500 O HOH B 139 O HOH B 140 1.96 REMARK 500 O ALA B 1 O HOH B 248 2.02 REMARK 500 O HOH B 141 O HOH B 228 2.08 REMARK 500 O HOH B 178 O HOH B 259 2.08 REMARK 500 O HOH A 141 O HOH A 260 2.10 REMARK 500 O HOH A 183 O HOH A 230 2.13 REMARK 500 O HOH A 176 O HOH A 245 2.13 REMARK 500 O HOH B 193 O HOH B 196 2.15 REMARK 500 O HOH A 143 O HOH A 234 2.15 REMARK 500 O HOH A 214 O HOH A 262 2.15 REMARK 500 NZ LYS B 85 O HOH B 219 2.16 REMARK 500 O HOH A 184 O HOH A 187 2.17 REMARK 500 N GLU A 53 O HOH A 213 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O ALA B 1 O HOH B 260 7545 1.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 LYS B 85 CE LYS B 85 NZ 0.156 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLU A 4 OE1 - CD - OE2 ANGL. DEV. = 19.0 DEGREES REMARK 500 MET A 13 CG - SD - CE ANGL. DEV. = -9.6 DEGREES REMARK 500 LEU A 17 CA - CB - CG ANGL. DEV. = 16.3 DEGREES REMARK 500 GLN A 28 CA - CB - CG ANGL. DEV. = 15.4 DEGREES REMARK 500 ASP A 71 CB - CG - OD2 ANGL. DEV. = -8.0 DEGREES REMARK 500 ARG A 79 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 ASP A 93 CB - CG - OD2 ANGL. DEV. = 8.3 DEGREES REMARK 500 ALA A 107 N - CA - CB ANGL. DEV. = 10.2 DEGREES REMARK 500 TYR A 110 CB - CG - CD1 ANGL. DEV. = -3.8 DEGREES REMARK 500 ASP B 11 CB - CG - OD1 ANGL. DEV. = 11.5 DEGREES REMARK 500 ASP B 11 CB - CG - OD2 ANGL. DEV. = -6.5 DEGREES REMARK 500 ALA B 12 N - CA - CB ANGL. DEV. = -11.6 DEGREES REMARK 500 MET B 13 CB - CG - SD ANGL. DEV. = -19.5 DEGREES REMARK 500 LEU B 17 CA - CB - CG ANGL. DEV. = 14.6 DEGREES REMARK 500 GLU B 19 OE1 - CD - OE2 ANGL. DEV. = 7.4 DEGREES REMARK 500 MET B 64 CA - CB - CG ANGL. DEV. = -11.8 DEGREES REMARK 500 ASP B 71 CB - CG - OD1 ANGL. DEV. = 8.1 DEGREES REMARK 500 ASP B 71 CB - CG - OD2 ANGL. DEV. = -6.6 DEGREES REMARK 500 ASP B 77 CB - CG - OD1 ANGL. DEV. = 7.5 DEGREES REMARK 500 LYS B 85 CD - CE - NZ ANGL. DEV. = -17.7 DEGREES REMARK 500 ASP B 98 OD1 - CG - OD2 ANGL. DEV. = 18.8 DEGREES REMARK 500 ASP B 98 CB - CG - OD1 ANGL. DEV. = -5.8 DEGREES REMARK 500 ASP B 98 CB - CG - OD2 ANGL. DEV. = -13.0 DEGREES REMARK 500 LYS B 101 CD - CE - NZ ANGL. DEV. = -18.2 DEGREES REMARK 500 TYR B 110 CB - CG - CD1 ANGL. DEV. = -3.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 2 -96.32 115.25 REMARK 500 ASN A 10 -168.28 -128.18 REMARK 500 MET A 44 51.95 -153.60 REMARK 500 SER A 100 1.25 -69.24 REMARK 500 MET B 13 34.33 74.01 REMARK 500 MET B 44 51.77 -140.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 GLN A 28 0.10 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 SO4 A 136 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 130 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 46 ND1 REMARK 620 2 CYS A 112 SG 135.3 REMARK 620 3 HIS A 117 ND1 100.9 121.6 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B 130 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 117 ND1 REMARK 620 2 CYS B 112 SG 116.2 REMARK 620 3 HIS B 46 ND1 108.2 135.0 REMARK 620 N 1 2 REMARK 700 REMARK 700 SHEET REMARK 700 STRAND 1 OF SHEET B1A (AND B1B) AND STRAND 1 OF SHEET B2A REMARK 700 (AND B2B) ARE PARTS OF A PIECE OF EXTENDED CHAIN WHICH IS REMARK 700 SPLIT BETWEEN BETWEEN THE TWO SHEETS. RESIDUES 14-16 REMARK 700 BELONG TO SHEET B1 AND RESIDUES 18-22 BELONG TO SHEET B2 REMARK 700 WITH A KINK IN BETWEEN. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: M1A REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: residues INTERACTING WITH THE COPPER ATOM. THE REMARK 800 COPPER FORMS FIVE BONDS REMARK 800 REMARK 800 SITE_IDENTIFIER: M1B REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: residues INTERACTING WITH THE COPPER ATOM. THE REMARK 800 COPPER FORMS FIVE BONDS REMARK 800 REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU A 130 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 135 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 136 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU B 130 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 135 REMARK 999 REMARK 999 SEQUENCE REMARK 999 RESIDUE 42 IS INCLUDED HERE AS SER BOTH IN THE *ATOM* AND REMARK 999 *SEQRES* RECORDS. RESIDUE 42 IS ALA IN THE CHEMICALLY REMARK 999 DETERMINED SEQUENCE. RESIDUE 43 IS INCLUDED HERE AS ALA REMARK 999 IN BOTH THE *ATOM* AND *SEQRES* RECORDS. RESIDUE 43 IS REMARK 999 VAL IN THE CHEMICALLY DETERMINED SEQUENCE. DBREF 2AZA A 1 129 UNP P00280 AZUR_ALCDE 21 149 DBREF 2AZA B 1 129 UNP P00280 AZUR_ALCDE 21 149 SEQADV 2AZA ASP A 16 UNP P00280 ASN 36 CONFLICT SEQADV 2AZA SER A 42 UNP P00280 VAL 62 CONFLICT SEQADV 2AZA GLU A 57 UNP P00280 GLN 77 CONFLICT SEQADV 2AZA ASP B 16 UNP P00280 ASN 36 CONFLICT SEQADV 2AZA SER B 42 UNP P00280 VAL 62 CONFLICT SEQADV 2AZA GLU B 57 UNP P00280 GLN 77 CONFLICT SEQRES 1 A 129 ALA GLN CYS GLU ALA THR ILE GLU SER ASN ASP ALA MET SEQRES 2 A 129 GLN TYR ASP LEU LYS GLU MET VAL VAL ASP LYS SER CYS SEQRES 3 A 129 LYS GLN PHE THR VAL HIS LEU LYS HIS VAL GLY LYS MET SEQRES 4 A 129 ALA LYS SER ALA MET GLY HIS ASN TRP VAL LEU THR LYS SEQRES 5 A 129 GLU ALA ASP LYS GLU GLY VAL ALA THR ASP GLY MET ASN SEQRES 6 A 129 ALA GLY LEU ALA GLN ASP TYR VAL LYS ALA GLY ASP THR SEQRES 7 A 129 ARG VAL ILE ALA HIS THR LYS VAL ILE GLY GLY GLY GLU SEQRES 8 A 129 SER ASP SER VAL THR PHE ASP VAL SER LYS LEU THR PRO SEQRES 9 A 129 GLY GLU ALA TYR ALA TYR PHE CYS SER PHE PRO GLY HIS SEQRES 10 A 129 TRP ALA MET MET LYS GLY THR LEU LYS LEU SER ASN SEQRES 1 B 129 ALA GLN CYS GLU ALA THR ILE GLU SER ASN ASP ALA MET SEQRES 2 B 129 GLN TYR ASP LEU LYS GLU MET VAL VAL ASP LYS SER CYS SEQRES 3 B 129 LYS GLN PHE THR VAL HIS LEU LYS HIS VAL GLY LYS MET SEQRES 4 B 129 ALA LYS SER ALA MET GLY HIS ASN TRP VAL LEU THR LYS SEQRES 5 B 129 GLU ALA ASP LYS GLU GLY VAL ALA THR ASP GLY MET ASN SEQRES 6 B 129 ALA GLY LEU ALA GLN ASP TYR VAL LYS ALA GLY ASP THR SEQRES 7 B 129 ARG VAL ILE ALA HIS THR LYS VAL ILE GLY GLY GLY GLU SEQRES 8 B 129 SER ASP SER VAL THR PHE ASP VAL SER LYS LEU THR PRO SEQRES 9 B 129 GLY GLU ALA TYR ALA TYR PHE CYS SER PHE PRO GLY HIS SEQRES 10 B 129 TRP ALA MET MET LYS GLY THR LEU LYS LEU SER ASN HET CU A 130 1 HET SO4 A 135 5 HET SO4 A 136 1 HET CU B 130 1 HET SO4 B 135 5 HETNAM CU COPPER (II) ION HETNAM SO4 SULFATE ION FORMUL 3 CU 2(CU 2+) FORMUL 4 SO4 3(O4 S 2-) FORMUL 8 HOH *281(H2 O) HELIX 1 AA ASP A 55 GLY A 67 13/10 BONDS 63-66, 64-67 13 HELIX 2 BA ASP A 98 LEU A 102 5 5 HELIX 3 AB ASP B 55 GLY B 67 13/10 BONDS 63-66, 64-67 13 HELIX 4 BB ASP B 98 LEU B 102 5 5 SHEET 1 B1A 4 GLN A 14 ASP A 16 0 SHEET 2 B1A 4 CYS A 3 ASN A 10 -1 O GLU A 8 N ASP A 16 SHEET 3 B1A 4 LYS A 27 VAL A 36 1 O THR A 30 N ALA A 5 SHEET 4 B1A 4 GLU A 91 VAL A 99 -1 O GLU A 91 N HIS A 35 SHEET 1 B2A 5 LYS A 18 VAL A 22 0 SHEET 2 B2A 5 MET A 121 SER A 128 1 O THR A 124 N MET A 20 SHEET 3 B2A 5 TYR A 108 CYS A 112 -1 O TYR A 108 N LEU A 125 SHEET 4 B2A 5 HIS A 46 THR A 51 -1 O VAL A 49 N PHE A 111 SHEET 5 B2A 5 ILE A 81 ILE A 87 -1 O ILE A 87 N HIS A 46 SHEET 1 B1B 4 GLN B 14 ASP B 16 0 SHEET 2 B1B 4 CYS B 3 ASN B 10 -1 O GLU B 8 N ASP B 16 SHEET 3 B1B 4 LYS B 27 VAL B 36 1 O THR B 30 N ALA B 5 SHEET 4 B1B 4 GLU B 91 VAL B 99 -1 O GLU B 91 N HIS B 35 SHEET 1 B2B 5 LYS B 18 VAL B 22 0 SHEET 2 B2B 5 MET B 121 SER B 128 1 O THR B 124 N MET B 20 SHEET 3 B2B 5 TYR B 108 CYS B 112 -1 O TYR B 108 N LEU B 125 SHEET 4 B2B 5 HIS B 46 THR B 51 -1 O VAL B 49 N PHE B 111 SHEET 5 B2B 5 ILE B 81 ILE B 87 -1 O ILE B 87 N HIS B 46 SSBOND 1 CYS A 3 CYS A 26 1555 1555 2.01 SSBOND 2 CYS B 3 CYS B 26 1555 1555 1.98 LINK CU CU A 130 ND1 HIS A 46 1555 1555 2.08 LINK CU CU A 130 SG CYS A 112 1555 1555 2.12 LINK CU CU A 130 ND1 HIS A 117 1555 1555 2.01 LINK CU CU B 130 ND1 HIS B 117 1555 1555 1.99 LINK CU CU B 130 SG CYS B 112 1555 1555 2.18 LINK CU CU B 130 ND1 HIS B 46 1555 1555 2.09 SITE 1 M1A 5 GLY A 45 HIS A 46 CYS A 112 HIS A 117 SITE 2 M1A 5 MET A 121 SITE 1 M1B 5 GLY B 45 HIS B 46 CYS B 112 HIS B 117 SITE 2 M1B 5 MET B 121 SITE 1 AC1 5 GLY A 45 HIS A 46 CYS A 112 HIS A 117 SITE 2 AC1 5 MET A 121 SITE 1 AC2 5 ALA A 75 GLY A 76 HIS A 83 HOH A 146 SITE 2 AC2 5 HOH A 197 SITE 1 AC3 1 LYS A 41 SITE 1 AC4 5 GLY B 45 HIS B 46 CYS B 112 HIS B 117 SITE 2 AC4 5 MET B 121 SITE 1 AC5 5 LYS B 74 GLY B 76 HIS B 83 HOH B 154 SITE 2 AC5 5 HOH B 166 CRYST1 75.000 74.200 99.500 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013333 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013477 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010050 0.00000 MTRIX1 1 -0.101580 0.994390 0.029520 0.79000 1 MTRIX2 1 0.994610 0.100900 0.023930 -1.08500 1 MTRIX3 1 0.020810 0.031790 -0.999280 24.50300 1