data_2B0C # _entry.id 2B0C # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.329 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2B0C RCSB RCSB034516 WWPDB D_1000034516 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id APC5626 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2B0C _pdbx_database_status.recvd_initial_deposition_date 2005-09-13 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Zhang, R.' 1 'Skarina, T.' 2 'Savchenko, A.' 3 'Edwards, A.' 4 'Joachimiak, A.' 5 'Midwest Center for Structural Genomics (MCSG)' 6 # _citation.id primary _citation.title 'The 2.0A crystal structure of the putative phosphatase from Escherichia coli' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zhang, R.' 1 ? primary 'Skarina, T.' 2 ? primary 'Savchenko, A.' 3 ? primary 'Edwards, A.' 4 ? primary 'Joachimiak, A.' 5 ? # _cell.entry_id 2B0C _cell.length_a 62.256 _cell.length_b 62.256 _cell.length_c 127.038 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2B0C _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'putative phosphatase' 23576.793 1 ? ? ? ? 2 non-polymer man 1-O-phosphono-alpha-D-glucopyranose 260.136 1 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 4 water nat water 18.015 161 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MARKEAKMLYIFDLGNVIVDIDFNRVLGAWSDLTRIPLASLKKSFHMGEAFHQHERGEISDEAFAEALCHEMALPLSYEQ FSHGWQAVFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQA EGFSPSDTVFFDDNADNIEGANQLGITSILVKDKTTIPDYFAKVLC ; _entity_poly.pdbx_seq_one_letter_code_can ;MARKEAKMLYIFDLGNVIVDIDFNRVLGAWSDLTRIPLASLKKSFHMGEAFHQHERGEISDEAFAEALCHEMALPLSYEQ FSHGWQAVFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQA EGFSPSDTVFFDDNADNIEGANQLGITSILVKDKTTIPDYFAKVLC ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier APC5626 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 ARG n 1 4 LYS n 1 5 GLU n 1 6 ALA n 1 7 LYS n 1 8 MET n 1 9 LEU n 1 10 TYR n 1 11 ILE n 1 12 PHE n 1 13 ASP n 1 14 LEU n 1 15 GLY n 1 16 ASN n 1 17 VAL n 1 18 ILE n 1 19 VAL n 1 20 ASP n 1 21 ILE n 1 22 ASP n 1 23 PHE n 1 24 ASN n 1 25 ARG n 1 26 VAL n 1 27 LEU n 1 28 GLY n 1 29 ALA n 1 30 TRP n 1 31 SER n 1 32 ASP n 1 33 LEU n 1 34 THR n 1 35 ARG n 1 36 ILE n 1 37 PRO n 1 38 LEU n 1 39 ALA n 1 40 SER n 1 41 LEU n 1 42 LYS n 1 43 LYS n 1 44 SER n 1 45 PHE n 1 46 HIS n 1 47 MET n 1 48 GLY n 1 49 GLU n 1 50 ALA n 1 51 PHE n 1 52 HIS n 1 53 GLN n 1 54 HIS n 1 55 GLU n 1 56 ARG n 1 57 GLY n 1 58 GLU n 1 59 ILE n 1 60 SER n 1 61 ASP n 1 62 GLU n 1 63 ALA n 1 64 PHE n 1 65 ALA n 1 66 GLU n 1 67 ALA n 1 68 LEU n 1 69 CYS n 1 70 HIS n 1 71 GLU n 1 72 MET n 1 73 ALA n 1 74 LEU n 1 75 PRO n 1 76 LEU n 1 77 SER n 1 78 TYR n 1 79 GLU n 1 80 GLN n 1 81 PHE n 1 82 SER n 1 83 HIS n 1 84 GLY n 1 85 TRP n 1 86 GLN n 1 87 ALA n 1 88 VAL n 1 89 PHE n 1 90 VAL n 1 91 ALA n 1 92 LEU n 1 93 ARG n 1 94 PRO n 1 95 GLU n 1 96 VAL n 1 97 ILE n 1 98 ALA n 1 99 ILE n 1 100 MET n 1 101 HIS n 1 102 LYS n 1 103 LEU n 1 104 ARG n 1 105 GLU n 1 106 GLN n 1 107 GLY n 1 108 HIS n 1 109 ARG n 1 110 VAL n 1 111 VAL n 1 112 VAL n 1 113 LEU n 1 114 SER n 1 115 ASN n 1 116 THR n 1 117 ASN n 1 118 ARG n 1 119 LEU n 1 120 HIS n 1 121 THR n 1 122 THR n 1 123 PHE n 1 124 TRP n 1 125 PRO n 1 126 GLU n 1 127 GLU n 1 128 TYR n 1 129 PRO n 1 130 GLU n 1 131 ILE n 1 132 ARG n 1 133 ASP n 1 134 ALA n 1 135 ALA n 1 136 ASP n 1 137 HIS n 1 138 ILE n 1 139 TYR n 1 140 LEU n 1 141 SER n 1 142 GLN n 1 143 ASP n 1 144 LEU n 1 145 GLY n 1 146 MET n 1 147 ARG n 1 148 LYS n 1 149 PRO n 1 150 GLU n 1 151 ALA n 1 152 ARG n 1 153 ILE n 1 154 TYR n 1 155 GLN n 1 156 HIS n 1 157 VAL n 1 158 LEU n 1 159 GLN n 1 160 ALA n 1 161 GLU n 1 162 GLY n 1 163 PHE n 1 164 SER n 1 165 PRO n 1 166 SER n 1 167 ASP n 1 168 THR n 1 169 VAL n 1 170 PHE n 1 171 PHE n 1 172 ASP n 1 173 ASP n 1 174 ASN n 1 175 ALA n 1 176 ASP n 1 177 ASN n 1 178 ILE n 1 179 GLU n 1 180 GLY n 1 181 ALA n 1 182 ASN n 1 183 GLN n 1 184 LEU n 1 185 GLY n 1 186 ILE n 1 187 THR n 1 188 SER n 1 189 ILE n 1 190 LEU n 1 191 VAL n 1 192 LYS n 1 193 ASP n 1 194 LYS n 1 195 THR n 1 196 THR n 1 197 ILE n 1 198 PRO n 1 199 ASP n 1 200 TYR n 1 201 PHE n 1 202 ALA n 1 203 LYS n 1 204 VAL n 1 205 LEU n 1 206 CYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Escherichia _entity_src_gen.pdbx_gene_src_gene yihX _entity_src_gen.gene_src_species 'Escherichia coli' _entity_src_gen.gene_src_strain K12 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 83333 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET15b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code YIHX_ECOLI _struct_ref.pdbx_db_accession P0A8Y3 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MARKEAKMLYIFDLGNVIVDIDFNRVLGAWSDLTRIPLASLKKSFHMGEAFHQHERGEISDEAFAEALCHEMALPLSYEQ FSHGWQAVFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQA EGFSPSDTVFFDDNADNIEGANQLGITSILVKDKTTIPDYFAKVLC ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2B0C _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 206 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P0A8Y3 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 206 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 206 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G1P D-saccharide n 1-O-phosphono-alpha-D-glucopyranose ? 'C6 H13 O9 P' 260.136 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2B0C _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.61 _exptl_crystal.density_percent_sol 52 _exptl_crystal.description 'Freidel pairs were used.' _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.pdbx_details '0.05M MES, 25% PEG 5KMME, 0.2M (NH4)2SO4, 10mM MgCl2, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2005-03-06 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111 channel' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9798 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9798 # _reflns.entry_id 2B0C _reflns.observed_criterion_sigma_F 2.0 _reflns.observed_criterion_sigma_I 2.0 _reflns.d_resolution_high 2.0 _reflns.d_resolution_low 50 _reflns.number_all 32264 _reflns.number_obs 32006 _reflns.percent_possible_obs 99.2 _reflns.pdbx_Rmerge_I_obs 0.049 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 56.5 _reflns.B_iso_Wilson_estimate 31 _reflns.pdbx_redundancy 14.6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.0 _reflns_shell.d_res_low 2.07 _reflns_shell.percent_possible_all 93.2 _reflns_shell.Rmerge_I_obs 0.578 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.35 _reflns_shell.pdbx_redundancy 6.6 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 3234 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2B0C _refine.ls_number_reflns_obs 16597 _refine.ls_number_reflns_all 16697 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 50 _refine.ls_d_res_high 2.00 _refine.ls_percent_reflns_obs 99.40 _refine.ls_R_factor_obs 0.20337 _refine.ls_R_factor_all 0.207 _refine.ls_R_factor_R_work 0.20058 _refine.ls_R_factor_R_free 0.2588 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 885 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.959 _refine.correlation_coeff_Fo_to_Fc_free 0.939 _refine.B_iso_mean 41.220 _refine.aniso_B[1][1] 0.63 _refine.aniso_B[2][2] 0.63 _refine.aniso_B[3][3] -1.27 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.177 _refine.pdbx_overall_ESU_R_Free 0.173 _refine.overall_SU_ML 0.118 _refine.overall_SU_B 9.309 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2B0C _refine_analyze.Luzzati_coordinate_error_obs 0.071 _refine_analyze.Luzzati_sigma_a_obs 0.28 _refine_analyze.Luzzati_d_res_low_obs 5.0 _refine_analyze.Luzzati_coordinate_error_free 0.18 _refine_analyze.Luzzati_sigma_a_free 0.32 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1604 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 17 _refine_hist.number_atoms_solvent 161 _refine_hist.number_atoms_total 1782 _refine_hist.d_res_high 2.00 _refine_hist.d_res_low 50 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.012 0.021 ? 1662 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.273 1.945 ? 2255 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.288 5.000 ? 198 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 34.769 24.000 ? 85 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 14.209 15.000 ? 272 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 9.287 15.000 ? 10 'X-RAY DIFFRACTION' ? r_chiral_restr 0.083 0.200 ? 247 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.020 ? 1272 'X-RAY DIFFRACTION' ? r_nbd_refined 0.212 0.200 ? 788 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.304 0.200 ? 1140 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.172 0.200 ? 147 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.211 0.200 ? 25 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.135 0.200 ? 13 'X-RAY DIFFRACTION' ? r_mcbond_it 0.766 1.500 ? 1034 'X-RAY DIFFRACTION' ? r_mcangle_it 1.297 2.000 ? 1600 'X-RAY DIFFRACTION' ? r_scbond_it 2.220 3.000 ? 726 'X-RAY DIFFRACTION' ? r_scangle_it 3.393 4.500 ? 655 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.000 _refine_ls_shell.d_res_low 2.052 _refine_ls_shell.number_reflns_R_work 1130 _refine_ls_shell.R_factor_R_work 0.261 _refine_ls_shell.percent_reflns_obs 94.74 _refine_ls_shell.R_factor_R_free 0.391 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 58 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2B0C _struct.title 'The crystal structure of the putative phosphatase from Escherichia coli' _struct.pdbx_descriptor 'putative phosphatase' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2B0C _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' _struct_keywords.text ;phosphatase, alpha-d-glucose-1-phosphate, structural genomics, PSI, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, UNKNOWN FUNCTION ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.details 'This protein may existed as dimer. The second part of the dimer is generated by the operation: 1/2-x,1/2+y,1/4-z' _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PHE A 23 ? ARG A 35 ? PHE A 23 ARG A 35 1 ? 13 HELX_P HELX_P2 2 PRO A 37 ? PHE A 45 ? PRO A 37 PHE A 45 1 ? 9 HELX_P HELX_P3 3 GLY A 48 ? ARG A 56 ? GLY A 48 ARG A 56 1 ? 9 HELX_P HELX_P4 4 SER A 60 ? ALA A 73 ? SER A 60 ALA A 73 1 ? 14 HELX_P HELX_P5 5 SER A 77 ? ALA A 87 ? SER A 77 ALA A 87 1 ? 11 HELX_P HELX_P6 6 ARG A 93 ? GLN A 106 ? ARG A 93 GLN A 106 1 ? 14 HELX_P HELX_P7 7 TRP A 124 ? GLU A 127 ? TRP A 124 GLU A 127 5 ? 4 HELX_P HELX_P8 8 TYR A 128 ? ALA A 135 ? TYR A 128 ALA A 135 1 ? 8 HELX_P HELX_P9 9 SER A 141 ? GLY A 145 ? SER A 141 GLY A 145 1 ? 5 HELX_P HELX_P10 10 GLU A 150 ? GLY A 162 ? GLU A 150 GLY A 162 1 ? 13 HELX_P HELX_P11 11 SER A 164 ? SER A 166 ? SER A 164 SER A 166 5 ? 3 HELX_P HELX_P12 12 ASN A 174 ? GLN A 183 ? ASN A 174 GLN A 183 1 ? 10 HELX_P HELX_P13 13 THR A 195 ? LYS A 203 ? THR A 195 LYS A 203 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale one ? A ASP 13 OD1 ? ? ? 1_555 B G1P . O2 ? ? A ASP 13 A G1P 496 1_555 ? ? ? ? ? ? ? 2.009 ? ? metalc1 metalc ? ? A ASP 32 OD2 ? ? ? 1_555 C MG . MG ? ? A ASP 32 A MG 497 1_555 ? ? ? ? ? ? ? 2.970 ? ? metalc2 metalc ? ? A THR 122 O ? ? ? 7_556 C MG . MG ? ? A THR 122 A MG 497 1_555 ? ? ? ? ? ? ? 2.683 ? ? metalc3 metalc ? ? A GLU 127 OE1 ? ? ? 7_556 C MG . MG ? ? A GLU 127 A MG 497 1_555 ? ? ? ? ? ? ? 2.537 ? ? metalc4 metalc ? ? A GLU 127 OE2 ? ? ? 7_556 C MG . MG ? ? A GLU 127 A MG 497 1_555 ? ? ? ? ? ? ? 2.381 ? ? metalc5 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 497 A HOH 514 1_555 ? ? ? ? ? ? ? 2.391 ? ? metalc6 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 497 A HOH 521 7_556 ? ? ? ? ? ? ? 2.513 ? ? metalc7 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 497 A HOH 545 1_555 ? ? ? ? ? ? ? 2.236 ? ? metalc8 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 497 A HOH 652 1_555 ? ? ? ? ? ? ? 2.284 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id LYS _struct_mon_prot_cis.label_seq_id 148 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id LYS _struct_mon_prot_cis.auth_seq_id 148 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 149 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 149 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 8.59 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 HIS A 137 ? LEU A 140 ? HIS A 137 LEU A 140 A 2 ARG A 109 ? SER A 114 ? ARG A 109 SER A 114 A 3 LEU A 9 ? PHE A 12 ? LEU A 9 PHE A 12 A 4 THR A 168 ? ASP A 172 ? THR A 168 ASP A 172 A 5 THR A 187 ? LEU A 190 ? THR A 187 LEU A 190 B 1 VAL A 19 ? ASP A 22 ? VAL A 19 ASP A 22 B 2 PHE A 89 ? LEU A 92 ? PHE A 89 LEU A 92 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O TYR A 139 ? O TYR A 139 N VAL A 112 ? N VAL A 112 A 2 3 O ARG A 109 ? O ARG A 109 N TYR A 10 ? N TYR A 10 A 3 4 N LEU A 9 ? N LEU A 9 O VAL A 169 ? O VAL A 169 A 4 5 N PHE A 170 ? N PHE A 170 O ILE A 189 ? O ILE A 189 B 1 2 N ASP A 20 ? N ASP A 20 O ALA A 91 ? O ALA A 91 # _database_PDB_matrix.entry_id 2B0C _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2B0C _atom_sites.fract_transf_matrix[1][1] 0.016063 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016063 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007872 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 ALA 2 2 ? ? ? A . n A 1 3 ARG 3 3 ? ? ? A . n A 1 4 LYS 4 4 ? ? ? A . n A 1 5 GLU 5 5 ? ? ? A . n A 1 6 ALA 6 6 6 ALA ALA A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 MET 8 8 8 MET MET A . n A 1 9 LEU 9 9 9 LEU LEU A . n A 1 10 TYR 10 10 10 TYR TYR A . n A 1 11 ILE 11 11 11 ILE ILE A . n A 1 12 PHE 12 12 12 PHE PHE A . n A 1 13 ASP 13 13 13 ASP ASP A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 GLY 15 15 15 GLY GLY A . n A 1 16 ASN 16 16 16 ASN ASN A . n A 1 17 VAL 17 17 17 VAL VAL A . n A 1 18 ILE 18 18 18 ILE ILE A . n A 1 19 VAL 19 19 19 VAL VAL A . n A 1 20 ASP 20 20 20 ASP ASP A . n A 1 21 ILE 21 21 21 ILE ILE A . n A 1 22 ASP 22 22 22 ASP ASP A . n A 1 23 PHE 23 23 23 PHE PHE A . n A 1 24 ASN 24 24 24 ASN ASN A . n A 1 25 ARG 25 25 25 ARG ARG A . n A 1 26 VAL 26 26 26 VAL VAL A . n A 1 27 LEU 27 27 27 LEU LEU A . n A 1 28 GLY 28 28 28 GLY GLY A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 TRP 30 30 30 TRP TRP A . n A 1 31 SER 31 31 31 SER SER A . n A 1 32 ASP 32 32 32 ASP ASP A . n A 1 33 LEU 33 33 33 LEU LEU A . n A 1 34 THR 34 34 34 THR THR A . n A 1 35 ARG 35 35 35 ARG ARG A . n A 1 36 ILE 36 36 36 ILE ILE A . n A 1 37 PRO 37 37 37 PRO PRO A . n A 1 38 LEU 38 38 38 LEU LEU A . n A 1 39 ALA 39 39 39 ALA ALA A . n A 1 40 SER 40 40 40 SER SER A . n A 1 41 LEU 41 41 41 LEU LEU A . n A 1 42 LYS 42 42 42 LYS LYS A . n A 1 43 LYS 43 43 43 LYS LYS A . n A 1 44 SER 44 44 44 SER SER A . n A 1 45 PHE 45 45 45 PHE PHE A . n A 1 46 HIS 46 46 46 HIS HIS A . n A 1 47 MET 47 47 47 MET MET A . n A 1 48 GLY 48 48 48 GLY GLY A . n A 1 49 GLU 49 49 49 GLU GLU A . n A 1 50 ALA 50 50 50 ALA ALA A . n A 1 51 PHE 51 51 51 PHE PHE A . n A 1 52 HIS 52 52 52 HIS HIS A . n A 1 53 GLN 53 53 53 GLN GLN A . n A 1 54 HIS 54 54 54 HIS HIS A . n A 1 55 GLU 55 55 55 GLU GLU A . n A 1 56 ARG 56 56 56 ARG ARG A . n A 1 57 GLY 57 57 57 GLY GLY A . n A 1 58 GLU 58 58 58 GLU GLU A . n A 1 59 ILE 59 59 59 ILE ILE A . n A 1 60 SER 60 60 60 SER SER A . n A 1 61 ASP 61 61 61 ASP ASP A . n A 1 62 GLU 62 62 62 GLU GLU A . n A 1 63 ALA 63 63 63 ALA ALA A . n A 1 64 PHE 64 64 64 PHE PHE A . n A 1 65 ALA 65 65 65 ALA ALA A . n A 1 66 GLU 66 66 66 GLU GLU A . n A 1 67 ALA 67 67 67 ALA ALA A . n A 1 68 LEU 68 68 68 LEU LEU A . n A 1 69 CYS 69 69 69 CYS CYS A . n A 1 70 HIS 70 70 70 HIS HIS A . n A 1 71 GLU 71 71 71 GLU GLU A . n A 1 72 MET 72 72 72 MET MET A . n A 1 73 ALA 73 73 73 ALA ALA A . n A 1 74 LEU 74 74 74 LEU LEU A . n A 1 75 PRO 75 75 75 PRO PRO A . n A 1 76 LEU 76 76 76 LEU LEU A . n A 1 77 SER 77 77 77 SER SER A . n A 1 78 TYR 78 78 78 TYR TYR A . n A 1 79 GLU 79 79 79 GLU GLU A . n A 1 80 GLN 80 80 80 GLN GLN A . n A 1 81 PHE 81 81 81 PHE PHE A . n A 1 82 SER 82 82 82 SER SER A . n A 1 83 HIS 83 83 83 HIS HIS A . n A 1 84 GLY 84 84 84 GLY GLY A . n A 1 85 TRP 85 85 85 TRP TRP A . n A 1 86 GLN 86 86 86 GLN GLN A . n A 1 87 ALA 87 87 87 ALA ALA A . n A 1 88 VAL 88 88 88 VAL VAL A . n A 1 89 PHE 89 89 89 PHE PHE A . n A 1 90 VAL 90 90 90 VAL VAL A . n A 1 91 ALA 91 91 91 ALA ALA A . n A 1 92 LEU 92 92 92 LEU LEU A . n A 1 93 ARG 93 93 93 ARG ARG A . n A 1 94 PRO 94 94 94 PRO PRO A . n A 1 95 GLU 95 95 95 GLU GLU A . n A 1 96 VAL 96 96 96 VAL VAL A . n A 1 97 ILE 97 97 97 ILE ILE A . n A 1 98 ALA 98 98 98 ALA ALA A . n A 1 99 ILE 99 99 99 ILE ILE A . n A 1 100 MET 100 100 100 MET MET A . n A 1 101 HIS 101 101 101 HIS HIS A . n A 1 102 LYS 102 102 102 LYS LYS A . n A 1 103 LEU 103 103 103 LEU LEU A . n A 1 104 ARG 104 104 104 ARG ARG A . n A 1 105 GLU 105 105 105 GLU GLU A . n A 1 106 GLN 106 106 106 GLN GLN A . n A 1 107 GLY 107 107 107 GLY GLY A . n A 1 108 HIS 108 108 108 HIS HIS A . n A 1 109 ARG 109 109 109 ARG ARG A . n A 1 110 VAL 110 110 110 VAL VAL A . n A 1 111 VAL 111 111 111 VAL VAL A . n A 1 112 VAL 112 112 112 VAL VAL A . n A 1 113 LEU 113 113 113 LEU LEU A . n A 1 114 SER 114 114 114 SER SER A . n A 1 115 ASN 115 115 115 ASN ASN A . n A 1 116 THR 116 116 116 THR THR A . n A 1 117 ASN 117 117 117 ASN ASN A . n A 1 118 ARG 118 118 118 ARG ARG A . n A 1 119 LEU 119 119 119 LEU LEU A . n A 1 120 HIS 120 120 120 HIS HIS A . n A 1 121 THR 121 121 121 THR THR A . n A 1 122 THR 122 122 122 THR THR A . n A 1 123 PHE 123 123 123 PHE PHE A . n A 1 124 TRP 124 124 124 TRP TRP A . n A 1 125 PRO 125 125 125 PRO PRO A . n A 1 126 GLU 126 126 126 GLU GLU A . n A 1 127 GLU 127 127 127 GLU GLU A . n A 1 128 TYR 128 128 128 TYR TYR A . n A 1 129 PRO 129 129 129 PRO PRO A . n A 1 130 GLU 130 130 130 GLU GLU A . n A 1 131 ILE 131 131 131 ILE ILE A . n A 1 132 ARG 132 132 132 ARG ARG A . n A 1 133 ASP 133 133 133 ASP ASP A . n A 1 134 ALA 134 134 134 ALA ALA A . n A 1 135 ALA 135 135 135 ALA ALA A . n A 1 136 ASP 136 136 136 ASP ASP A . n A 1 137 HIS 137 137 137 HIS HIS A . n A 1 138 ILE 138 138 138 ILE ILE A . n A 1 139 TYR 139 139 139 TYR TYR A . n A 1 140 LEU 140 140 140 LEU LEU A . n A 1 141 SER 141 141 141 SER SER A . n A 1 142 GLN 142 142 142 GLN GLN A . n A 1 143 ASP 143 143 143 ASP ASP A . n A 1 144 LEU 144 144 144 LEU LEU A . n A 1 145 GLY 145 145 145 GLY GLY A . n A 1 146 MET 146 146 146 MET MET A . n A 1 147 ARG 147 147 147 ARG ARG A . n A 1 148 LYS 148 148 148 LYS LYS A . n A 1 149 PRO 149 149 149 PRO PRO A . n A 1 150 GLU 150 150 150 GLU GLU A . n A 1 151 ALA 151 151 151 ALA ALA A . n A 1 152 ARG 152 152 152 ARG ARG A . n A 1 153 ILE 153 153 153 ILE ILE A . n A 1 154 TYR 154 154 154 TYR TYR A . n A 1 155 GLN 155 155 155 GLN GLN A . n A 1 156 HIS 156 156 156 HIS HIS A . n A 1 157 VAL 157 157 157 VAL VAL A . n A 1 158 LEU 158 158 158 LEU LEU A . n A 1 159 GLN 159 159 159 GLN GLN A . n A 1 160 ALA 160 160 160 ALA ALA A . n A 1 161 GLU 161 161 161 GLU GLU A . n A 1 162 GLY 162 162 162 GLY GLY A . n A 1 163 PHE 163 163 163 PHE PHE A . n A 1 164 SER 164 164 164 SER SER A . n A 1 165 PRO 165 165 165 PRO PRO A . n A 1 166 SER 166 166 166 SER SER A . n A 1 167 ASP 167 167 167 ASP ASP A . n A 1 168 THR 168 168 168 THR THR A . n A 1 169 VAL 169 169 169 VAL VAL A . n A 1 170 PHE 170 170 170 PHE PHE A . n A 1 171 PHE 171 171 171 PHE PHE A . n A 1 172 ASP 172 172 172 ASP ASP A . n A 1 173 ASP 173 173 173 ASP ASP A . n A 1 174 ASN 174 174 174 ASN ASN A . n A 1 175 ALA 175 175 175 ALA ALA A . n A 1 176 ASP 176 176 176 ASP ASP A . n A 1 177 ASN 177 177 177 ASN ASN A . n A 1 178 ILE 178 178 178 ILE ILE A . n A 1 179 GLU 179 179 179 GLU GLU A . n A 1 180 GLY 180 180 180 GLY GLY A . n A 1 181 ALA 181 181 181 ALA ALA A . n A 1 182 ASN 182 182 182 ASN ASN A . n A 1 183 GLN 183 183 183 GLN GLN A . n A 1 184 LEU 184 184 184 LEU LEU A . n A 1 185 GLY 185 185 185 GLY GLY A . n A 1 186 ILE 186 186 186 ILE ILE A . n A 1 187 THR 187 187 187 THR THR A . n A 1 188 SER 188 188 188 SER SER A . n A 1 189 ILE 189 189 189 ILE ILE A . n A 1 190 LEU 190 190 190 LEU LEU A . n A 1 191 VAL 191 191 191 VAL VAL A . n A 1 192 LYS 192 192 192 LYS LYS A . n A 1 193 ASP 193 193 193 ASP ASP A . n A 1 194 LYS 194 194 194 LYS LYS A . n A 1 195 THR 195 195 195 THR THR A . n A 1 196 THR 196 196 196 THR THR A . n A 1 197 ILE 197 197 197 ILE ILE A . n A 1 198 PRO 198 198 198 PRO PRO A . n A 1 199 ASP 199 199 199 ASP ASP A . n A 1 200 TYR 200 200 200 TYR TYR A . n A 1 201 PHE 201 201 201 PHE PHE A . n A 1 202 ALA 202 202 202 ALA ALA A . n A 1 203 LYS 203 203 203 LYS LYS A . n A 1 204 VAL 204 204 204 VAL VAL A . n A 1 205 LEU 205 205 ? ? ? A . n A 1 206 CYS 206 206 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 G1P 1 496 496 G1P G1P A . C 3 MG 1 497 1 MG MG A . D 4 HOH 1 498 4 HOH HOH A . D 4 HOH 2 499 5 HOH HOH A . D 4 HOH 3 500 6 HOH HOH A . D 4 HOH 4 501 7 HOH HOH A . D 4 HOH 5 502 8 HOH HOH A . D 4 HOH 6 503 9 HOH HOH A . D 4 HOH 7 504 10 HOH HOH A . D 4 HOH 8 505 11 HOH HOH A . D 4 HOH 9 506 12 HOH HOH A . D 4 HOH 10 507 13 HOH HOH A . D 4 HOH 11 508 14 HOH HOH A . D 4 HOH 12 509 15 HOH HOH A . D 4 HOH 13 510 16 HOH HOH A . D 4 HOH 14 511 17 HOH HOH A . D 4 HOH 15 512 18 HOH HOH A . D 4 HOH 16 513 19 HOH HOH A . D 4 HOH 17 514 20 HOH HOH A . D 4 HOH 18 515 21 HOH HOH A . D 4 HOH 19 516 22 HOH HOH A . D 4 HOH 20 517 23 HOH HOH A . D 4 HOH 21 518 24 HOH HOH A . D 4 HOH 22 519 25 HOH HOH A . D 4 HOH 23 520 26 HOH HOH A . D 4 HOH 24 521 27 HOH HOH A . D 4 HOH 25 522 28 HOH HOH A . D 4 HOH 26 523 29 HOH HOH A . D 4 HOH 27 524 30 HOH HOH A . D 4 HOH 28 525 31 HOH HOH A . D 4 HOH 29 526 32 HOH HOH A . D 4 HOH 30 527 33 HOH HOH A . D 4 HOH 31 528 34 HOH HOH A . D 4 HOH 32 529 35 HOH HOH A . D 4 HOH 33 530 36 HOH HOH A . D 4 HOH 34 531 37 HOH HOH A . D 4 HOH 35 532 38 HOH HOH A . D 4 HOH 36 533 39 HOH HOH A . D 4 HOH 37 534 40 HOH HOH A . D 4 HOH 38 535 41 HOH HOH A . D 4 HOH 39 536 42 HOH HOH A . D 4 HOH 40 537 43 HOH HOH A . D 4 HOH 41 538 44 HOH HOH A . D 4 HOH 42 539 45 HOH HOH A . D 4 HOH 43 540 46 HOH HOH A . D 4 HOH 44 541 47 HOH HOH A . D 4 HOH 45 542 48 HOH HOH A . D 4 HOH 46 543 49 HOH HOH A . D 4 HOH 47 544 50 HOH HOH A . D 4 HOH 48 545 51 HOH HOH A . D 4 HOH 49 546 52 HOH HOH A . D 4 HOH 50 547 53 HOH HOH A . D 4 HOH 51 548 54 HOH HOH A . D 4 HOH 52 549 55 HOH HOH A . D 4 HOH 53 550 56 HOH HOH A . D 4 HOH 54 551 57 HOH HOH A . D 4 HOH 55 552 58 HOH HOH A . D 4 HOH 56 553 59 HOH HOH A . D 4 HOH 57 554 60 HOH HOH A . D 4 HOH 58 555 61 HOH HOH A . D 4 HOH 59 556 62 HOH HOH A . D 4 HOH 60 557 63 HOH HOH A . D 4 HOH 61 558 64 HOH HOH A . D 4 HOH 62 559 65 HOH HOH A . D 4 HOH 63 560 66 HOH HOH A . D 4 HOH 64 561 67 HOH HOH A . D 4 HOH 65 562 68 HOH HOH A . D 4 HOH 66 563 69 HOH HOH A . D 4 HOH 67 564 70 HOH HOH A . D 4 HOH 68 565 71 HOH HOH A . D 4 HOH 69 566 72 HOH HOH A . D 4 HOH 70 567 73 HOH HOH A . D 4 HOH 71 568 74 HOH HOH A . D 4 HOH 72 569 75 HOH HOH A . D 4 HOH 73 570 76 HOH HOH A . D 4 HOH 74 571 77 HOH HOH A . D 4 HOH 75 572 78 HOH HOH A . D 4 HOH 76 573 79 HOH HOH A . D 4 HOH 77 574 80 HOH HOH A . D 4 HOH 78 575 81 HOH HOH A . D 4 HOH 79 576 82 HOH HOH A . D 4 HOH 80 577 83 HOH HOH A . D 4 HOH 81 578 84 HOH HOH A . D 4 HOH 82 579 85 HOH HOH A . D 4 HOH 83 580 86 HOH HOH A . D 4 HOH 84 581 87 HOH HOH A . D 4 HOH 85 582 88 HOH HOH A . D 4 HOH 86 583 89 HOH HOH A . D 4 HOH 87 584 90 HOH HOH A . D 4 HOH 88 585 91 HOH HOH A . D 4 HOH 89 586 92 HOH HOH A . D 4 HOH 90 587 93 HOH HOH A . D 4 HOH 91 588 94 HOH HOH A . D 4 HOH 92 589 95 HOH HOH A . D 4 HOH 93 590 96 HOH HOH A . D 4 HOH 94 591 97 HOH HOH A . D 4 HOH 95 592 98 HOH HOH A . D 4 HOH 96 593 99 HOH HOH A . D 4 HOH 97 594 100 HOH HOH A . D 4 HOH 98 595 101 HOH HOH A . D 4 HOH 99 596 102 HOH HOH A . D 4 HOH 100 597 103 HOH HOH A . D 4 HOH 101 598 104 HOH HOH A . D 4 HOH 102 599 105 HOH HOH A . D 4 HOH 103 600 106 HOH HOH A . D 4 HOH 104 601 107 HOH HOH A . D 4 HOH 105 602 108 HOH HOH A . D 4 HOH 106 603 109 HOH HOH A . D 4 HOH 107 604 110 HOH HOH A . D 4 HOH 108 605 111 HOH HOH A . D 4 HOH 109 606 112 HOH HOH A . D 4 HOH 110 607 113 HOH HOH A . D 4 HOH 111 608 114 HOH HOH A . D 4 HOH 112 609 115 HOH HOH A . D 4 HOH 113 610 116 HOH HOH A . D 4 HOH 114 611 117 HOH HOH A . D 4 HOH 115 612 118 HOH HOH A . D 4 HOH 116 613 119 HOH HOH A . D 4 HOH 117 614 120 HOH HOH A . D 4 HOH 118 615 121 HOH HOH A . D 4 HOH 119 616 122 HOH HOH A . D 4 HOH 120 617 123 HOH HOH A . D 4 HOH 121 618 124 HOH HOH A . D 4 HOH 122 619 125 HOH HOH A . D 4 HOH 123 620 126 HOH HOH A . D 4 HOH 124 621 127 HOH HOH A . D 4 HOH 125 622 128 HOH HOH A . D 4 HOH 126 623 129 HOH HOH A . D 4 HOH 127 624 130 HOH HOH A . D 4 HOH 128 625 131 HOH HOH A . D 4 HOH 129 626 132 HOH HOH A . D 4 HOH 130 627 133 HOH HOH A . D 4 HOH 131 628 134 HOH HOH A . D 4 HOH 132 629 135 HOH HOH A . D 4 HOH 133 630 136 HOH HOH A . D 4 HOH 134 631 137 HOH HOH A . D 4 HOH 135 632 138 HOH HOH A . D 4 HOH 136 633 139 HOH HOH A . D 4 HOH 137 634 140 HOH HOH A . D 4 HOH 138 635 141 HOH HOH A . D 4 HOH 139 636 142 HOH HOH A . D 4 HOH 140 637 143 HOH HOH A . D 4 HOH 141 638 144 HOH HOH A . D 4 HOH 142 639 145 HOH HOH A . D 4 HOH 143 640 146 HOH HOH A . D 4 HOH 144 641 147 HOH HOH A . D 4 HOH 145 642 148 HOH HOH A . D 4 HOH 146 643 149 HOH HOH A . D 4 HOH 147 644 150 HOH HOH A . D 4 HOH 148 645 151 HOH HOH A . D 4 HOH 149 646 152 HOH HOH A . D 4 HOH 150 647 153 HOH HOH A . D 4 HOH 151 648 154 HOH HOH A . D 4 HOH 152 649 155 HOH HOH A . D 4 HOH 153 650 156 HOH HOH A . D 4 HOH 154 651 157 HOH HOH A . D 4 HOH 155 652 158 HOH HOH A . D 4 HOH 156 653 159 HOH HOH A . D 4 HOH 157 654 160 HOH HOH A . D 4 HOH 158 655 161 HOH HOH A . D 4 HOH 159 656 162 HOH HOH A . D 4 HOH 160 657 163 HOH HOH A . D 4 HOH 161 658 164 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 7_556 y,x,-z+1 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 127.0380000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD2 ? A ASP 32 ? A ASP 32 ? 1_555 MG ? C MG . ? A MG 497 ? 1_555 O ? A THR 122 ? A THR 122 ? 7_556 136.2 ? 2 OD2 ? A ASP 32 ? A ASP 32 ? 1_555 MG ? C MG . ? A MG 497 ? 1_555 OE1 ? A GLU 127 ? A GLU 127 ? 7_556 84.8 ? 3 O ? A THR 122 ? A THR 122 ? 7_556 MG ? C MG . ? A MG 497 ? 1_555 OE1 ? A GLU 127 ? A GLU 127 ? 7_556 74.0 ? 4 OD2 ? A ASP 32 ? A ASP 32 ? 1_555 MG ? C MG . ? A MG 497 ? 1_555 OE2 ? A GLU 127 ? A GLU 127 ? 7_556 67.9 ? 5 O ? A THR 122 ? A THR 122 ? 7_556 MG ? C MG . ? A MG 497 ? 1_555 OE2 ? A GLU 127 ? A GLU 127 ? 7_556 120.6 ? 6 OE1 ? A GLU 127 ? A GLU 127 ? 7_556 MG ? C MG . ? A MG 497 ? 1_555 OE2 ? A GLU 127 ? A GLU 127 ? 7_556 52.5 ? 7 OD2 ? A ASP 32 ? A ASP 32 ? 1_555 MG ? C MG . ? A MG 497 ? 1_555 O ? D HOH . ? A HOH 514 ? 1_555 57.1 ? 8 O ? A THR 122 ? A THR 122 ? 7_556 MG ? C MG . ? A MG 497 ? 1_555 O ? D HOH . ? A HOH 514 ? 1_555 165.5 ? 9 OE1 ? A GLU 127 ? A GLU 127 ? 7_556 MG ? C MG . ? A MG 497 ? 1_555 O ? D HOH . ? A HOH 514 ? 1_555 117.2 ? 10 OE2 ? A GLU 127 ? A GLU 127 ? 7_556 MG ? C MG . ? A MG 497 ? 1_555 O ? D HOH . ? A HOH 514 ? 1_555 66.7 ? 11 OD2 ? A ASP 32 ? A ASP 32 ? 1_555 MG ? C MG . ? A MG 497 ? 1_555 O ? D HOH . ? A HOH 521 ? 7_556 147.8 ? 12 O ? A THR 122 ? A THR 122 ? 7_556 MG ? C MG . ? A MG 497 ? 1_555 O ? D HOH . ? A HOH 521 ? 7_556 72.6 ? 13 OE1 ? A GLU 127 ? A GLU 127 ? 7_556 MG ? C MG . ? A MG 497 ? 1_555 O ? D HOH . ? A HOH 521 ? 7_556 92.9 ? 14 OE2 ? A GLU 127 ? A GLU 127 ? 7_556 MG ? C MG . ? A MG 497 ? 1_555 O ? D HOH . ? A HOH 521 ? 7_556 85.2 ? 15 O ? D HOH . ? A HOH 514 ? 1_555 MG ? C MG . ? A MG 497 ? 1_555 O ? D HOH . ? A HOH 521 ? 7_556 96.7 ? 16 OD2 ? A ASP 32 ? A ASP 32 ? 1_555 MG ? C MG . ? A MG 497 ? 1_555 O ? D HOH . ? A HOH 545 ? 1_555 98.9 ? 17 O ? A THR 122 ? A THR 122 ? 7_556 MG ? C MG . ? A MG 497 ? 1_555 O ? D HOH . ? A HOH 545 ? 1_555 83.1 ? 18 OE1 ? A GLU 127 ? A GLU 127 ? 7_556 MG ? C MG . ? A MG 497 ? 1_555 O ? D HOH . ? A HOH 545 ? 1_555 149.6 ? 19 OE2 ? A GLU 127 ? A GLU 127 ? 7_556 MG ? C MG . ? A MG 497 ? 1_555 O ? D HOH . ? A HOH 545 ? 1_555 155.8 ? 20 O ? D HOH . ? A HOH 514 ? 1_555 MG ? C MG . ? A MG 497 ? 1_555 O ? D HOH . ? A HOH 545 ? 1_555 89.2 ? 21 O ? D HOH . ? A HOH 521 ? 7_556 MG ? C MG . ? A MG 497 ? 1_555 O ? D HOH . ? A HOH 545 ? 1_555 99.1 ? 22 OD2 ? A ASP 32 ? A ASP 32 ? 1_555 MG ? C MG . ? A MG 497 ? 1_555 O ? D HOH . ? A HOH 652 ? 1_555 47.1 ? 23 O ? A THR 122 ? A THR 122 ? 7_556 MG ? C MG . ? A MG 497 ? 1_555 O ? D HOH . ? A HOH 652 ? 1_555 94.3 ? 24 OE1 ? A GLU 127 ? A GLU 127 ? 7_556 MG ? C MG . ? A MG 497 ? 1_555 O ? D HOH . ? A HOH 652 ? 1_555 90.2 ? 25 OE2 ? A GLU 127 ? A GLU 127 ? 7_556 MG ? C MG . ? A MG 497 ? 1_555 O ? D HOH . ? A HOH 652 ? 1_555 108.2 ? 26 O ? D HOH . ? A HOH 514 ? 1_555 MG ? C MG . ? A MG 497 ? 1_555 O ? D HOH . ? A HOH 652 ? 1_555 94.8 ? 27 O ? D HOH . ? A HOH 521 ? 7_556 MG ? C MG . ? A MG 497 ? 1_555 O ? D HOH . ? A HOH 652 ? 1_555 165.0 ? 28 O ? D HOH . ? A HOH 545 ? 1_555 MG ? C MG . ? A MG 497 ? 1_555 O ? D HOH . ? A HOH 652 ? 1_555 71.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-11-22 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2020-07-29 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Source and taxonomy' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp 2 4 'Structure model' entity 3 4 'Structure model' pdbx_chem_comp_identifier 4 4 'Structure model' pdbx_entity_nonpoly 5 4 'Structure model' pdbx_struct_conn_angle 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_site 8 4 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_chem_comp.mon_nstd_flag' 2 4 'Structure model' '_chem_comp.name' 3 4 'Structure model' '_entity.pdbx_description' 4 4 'Structure model' '_pdbx_entity_nonpoly.name' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 19 4 'Structure model' '_pdbx_struct_conn_angle.value' 20 4 'Structure model' '_struct_conn.pdbx_dist_value' 21 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 22 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 23 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 24 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 25 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 26 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 27 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 28 4 'Structure model' '_struct_conn.ptnr1_symmetry' 29 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 30 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 31 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 32 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 33 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 34 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 35 4 'Structure model' '_struct_conn.ptnr2_symmetry' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0005 ? 1 SBC-Collect 'data collection' . ? 2 HKL-2000 'data scaling' . ? 3 HKL-3000 phasing . ? 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OD2 A ASP 173 ? ? O3 A G1P 496 ? ? 2.15 2 1 OD2 A ASP 32 ? ? O A HOH 652 ? ? 2.19 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A ASP 13 ? ? CG A ASP 13 ? ? OD1 A ASP 13 ? ? 112.04 118.30 -6.26 0.90 N 2 1 CB A ASP 13 ? ? CG A ASP 13 ? ? OD2 A ASP 13 ? ? 129.97 118.30 11.67 0.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 14 ? ? -96.56 -69.38 2 1 VAL A 17 ? ? -131.99 -57.47 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A ALA 2 ? A ALA 2 3 1 Y 1 A ARG 3 ? A ARG 3 4 1 Y 1 A LYS 4 ? A LYS 4 5 1 Y 1 A GLU 5 ? A GLU 5 6 1 Y 1 A LEU 205 ? A LEU 205 7 1 Y 1 A CYS 206 ? A CYS 206 # _pdbx_chem_comp_identifier.comp_id G1P _pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL' _pdbx_chem_comp_identifier.program PDB-CARE _pdbx_chem_comp_identifier.program_version 1.0 _pdbx_chem_comp_identifier.identifier a-D-Glcp1PO3 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 1-O-phosphono-alpha-D-glucopyranose G1P 3 'MAGNESIUM ION' MG 4 water HOH #