data_2B0V # _entry.id 2B0V # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.289 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2B0V RCSB RCSB034535 WWPDB D_1000034535 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id APC5831 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2B0V _pdbx_database_status.recvd_initial_deposition_date 2005-09-14 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Osipiuk, J.' 1 'Skarina, T.' 2 'Savchenko, A.' 3 'Edwards, A.' 4 'Joachimiak, A.' 5 MCSG 6 'Midwest Center for Structural Genomics (MCSG)' 7 # _citation.id primary _citation.title 'X-ray structure of NUDIX hydrolase from Nitrosomonas europaea.' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Osipiuk, J.' 1 primary 'Skarina, T.' 2 primary 'Savchenko, A.' 3 primary 'Edwards, A.' 4 primary 'Joachimiak, A.' 5 # _cell.entry_id 2B0V _cell.length_a 55.450 _cell.length_b 66.509 _cell.length_c 73.812 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2B0V _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'NUDIX hydrolase' 17444.248 1 ? ? ? ? 2 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 3 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 4 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 5 water nat water 18.015 164 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GH(MSE)TWKPNVTVAAVIEQDDKYLLVEEIPRGTAIKLNQPAGHLEPGESIIQACSREVLEETGHSFLPEVLTGIYHWT CASNGTTYLRFTFSGQVVSFDPDRKLDTGIVRAAWFSIDEIRAKQA(MSE)HRTPLV(MSE)QCIEDYHAGKRYPLDILQ YYDGS ; _entity_poly.pdbx_seq_one_letter_code_can ;GHMTWKPNVTVAAVIEQDDKYLLVEEIPRGTAIKLNQPAGHLEPGESIIQACSREVLEETGHSFLPEVLTGIYHWTCASN GTTYLRFTFSGQVVSFDPDRKLDTGIVRAAWFSIDEIRAKQAMHRTPLVMQCIEDYHAGKRYPLDILQYYDGS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier APC5831 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 HIS n 1 3 MSE n 1 4 THR n 1 5 TRP n 1 6 LYS n 1 7 PRO n 1 8 ASN n 1 9 VAL n 1 10 THR n 1 11 VAL n 1 12 ALA n 1 13 ALA n 1 14 VAL n 1 15 ILE n 1 16 GLU n 1 17 GLN n 1 18 ASP n 1 19 ASP n 1 20 LYS n 1 21 TYR n 1 22 LEU n 1 23 LEU n 1 24 VAL n 1 25 GLU n 1 26 GLU n 1 27 ILE n 1 28 PRO n 1 29 ARG n 1 30 GLY n 1 31 THR n 1 32 ALA n 1 33 ILE n 1 34 LYS n 1 35 LEU n 1 36 ASN n 1 37 GLN n 1 38 PRO n 1 39 ALA n 1 40 GLY n 1 41 HIS n 1 42 LEU n 1 43 GLU n 1 44 PRO n 1 45 GLY n 1 46 GLU n 1 47 SER n 1 48 ILE n 1 49 ILE n 1 50 GLN n 1 51 ALA n 1 52 CYS n 1 53 SER n 1 54 ARG n 1 55 GLU n 1 56 VAL n 1 57 LEU n 1 58 GLU n 1 59 GLU n 1 60 THR n 1 61 GLY n 1 62 HIS n 1 63 SER n 1 64 PHE n 1 65 LEU n 1 66 PRO n 1 67 GLU n 1 68 VAL n 1 69 LEU n 1 70 THR n 1 71 GLY n 1 72 ILE n 1 73 TYR n 1 74 HIS n 1 75 TRP n 1 76 THR n 1 77 CYS n 1 78 ALA n 1 79 SER n 1 80 ASN n 1 81 GLY n 1 82 THR n 1 83 THR n 1 84 TYR n 1 85 LEU n 1 86 ARG n 1 87 PHE n 1 88 THR n 1 89 PHE n 1 90 SER n 1 91 GLY n 1 92 GLN n 1 93 VAL n 1 94 VAL n 1 95 SER n 1 96 PHE n 1 97 ASP n 1 98 PRO n 1 99 ASP n 1 100 ARG n 1 101 LYS n 1 102 LEU n 1 103 ASP n 1 104 THR n 1 105 GLY n 1 106 ILE n 1 107 VAL n 1 108 ARG n 1 109 ALA n 1 110 ALA n 1 111 TRP n 1 112 PHE n 1 113 SER n 1 114 ILE n 1 115 ASP n 1 116 GLU n 1 117 ILE n 1 118 ARG n 1 119 ALA n 1 120 LYS n 1 121 GLN n 1 122 ALA n 1 123 MSE n 1 124 HIS n 1 125 ARG n 1 126 THR n 1 127 PRO n 1 128 LEU n 1 129 VAL n 1 130 MSE n 1 131 GLN n 1 132 CYS n 1 133 ILE n 1 134 GLU n 1 135 ASP n 1 136 TYR n 1 137 HIS n 1 138 ALA n 1 139 GLY n 1 140 LYS n 1 141 ARG n 1 142 TYR n 1 143 PRO n 1 144 LEU n 1 145 ASP n 1 146 ILE n 1 147 LEU n 1 148 GLN n 1 149 TYR n 1 150 TYR n 1 151 ASP n 1 152 GLY n 1 153 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Nitrosomonas _entity_src_gen.pdbx_gene_src_gene NE0184 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Nitrosomonas europaea' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 915 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc 19718 _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET15b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q82XR9_NITEU _struct_ref.pdbx_db_accession Q82XR9 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MTWKPNVTVAAVIEQDDKYLLVEEIPRGTAIKLNQPAGHLEPGESIIQACSREVLEETGHSFLPEVLTGIYHWTCASNGT TYLRFTFSGQVVSFDPDRKLDTGIVRAAWFSIDEIRAKQAMHRTPLVMQCIEDYHAGKRYPLDILQYYD ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2B0V _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 151 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q82XR9 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 149 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 149 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2B0V GLY A 1 ? UNP Q82XR9 ? ? 'CLONING ARTIFACT' -1 1 1 2B0V HIS A 2 ? UNP Q82XR9 ? ? 'CLONING ARTIFACT' 0 2 1 2B0V MSE A 3 ? UNP Q82XR9 MET 1 'MODIFIED RESIDUE' 1 3 1 2B0V MSE A 123 ? UNP Q82XR9 MET 121 'MODIFIED RESIDUE' 121 4 1 2B0V MSE A 130 ? UNP Q82XR9 MET 128 'MODIFIED RESIDUE' 128 5 1 2B0V GLY A 152 ? UNP Q82XR9 ? ? 'CLONING ARTIFACT' 150 6 1 2B0V SER A 153 ? UNP Q82XR9 ? ? 'CLONING ARTIFACT' 151 7 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2B0V _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.0 _exptl_crystal.density_percent_sol 37.0 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.pdbx_details '3.2 M NaCl, 0.1 M sodium acetate, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2005-07-12 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'double crystal monochromator' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97945 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97945 # _reflns.entry_id 2B0V _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 1.55 _reflns.d_resolution_low 40 _reflns.number_all 20171 _reflns.number_obs 16520 _reflns.percent_possible_obs 81.9 _reflns.pdbx_Rmerge_I_obs 0.066 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 33.5 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 8.1 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.55 _reflns_shell.d_res_low 1.58 _reflns_shell.percent_possible_all 22.8 _reflns_shell.Rmerge_I_obs 0.331 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.59 _reflns_shell.pdbx_redundancy 2.1 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 281 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2B0V _refine.ls_number_reflns_obs 16498 _refine.ls_number_reflns_all 16498 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 40.00 _refine.ls_d_res_high 1.55 _refine.ls_percent_reflns_obs 81.97 _refine.ls_R_factor_obs 0.1677 _refine.ls_R_factor_all 0.1677 _refine.ls_R_factor_R_work 0.1669 _refine.ls_R_factor_R_free 0.2063 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 1681 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.966 _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 21.390 _refine.aniso_B[1][1] -1.43 _refine.aniso_B[2][2] 1.76 _refine.aniso_B[3][3] -0.33 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. ALL DATA WERE USED IN FINAL ROUND OF REFINEMENT. R-FACTOR-ALL CORRESPONDS TO DEPOSITED FILE. R-WORK AND R-FREE FACTORS ARE TAKEN FROM SECOND TO LAST ROUND OF REFINEMENT WHICH USED TEST DATA SET. THE FOLLOWING SOFTWARE WAS ALSO USED FOR PHASING: SHELXD, MLPHARE, DM, SOLVE/RESOLVE, HKL-3000 ; _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.099 _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.043 _refine.overall_SU_B 2.225 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1175 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 6 _refine_hist.number_atoms_solvent 164 _refine_hist.number_atoms_total 1345 _refine_hist.d_res_high 1.55 _refine_hist.d_res_low 40.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.015 0.022 ? 1260 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.522 1.967 ? 1724 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.253 5.000 ? 165 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 32.791 23.621 ? 58 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 14.047 15.000 ? 218 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 22.465 15.000 ? 9 'X-RAY DIFFRACTION' ? r_chiral_restr 0.119 0.200 ? 194 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.007 0.020 ? 966 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.213 0.200 ? 562 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.312 0.200 ? 864 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.155 0.200 ? 102 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined 0.063 0.200 ? 2 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.179 0.200 ? 58 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.172 0.200 ? 27 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined 0.086 0.200 ? 1 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.028 1.500 ? 765 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.822 2.000 ? 1252 'X-RAY DIFFRACTION' ? r_scbond_it 2.666 3.000 ? 512 'X-RAY DIFFRACTION' ? r_scangle_it 4.184 4.500 ? 463 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.551 _refine_ls_shell.d_res_low 1.591 _refine_ls_shell.number_reflns_R_work 357 _refine_ls_shell.R_factor_R_work 0.222 _refine_ls_shell.percent_reflns_obs 24.67 _refine_ls_shell.R_factor_R_free 0.277 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 39 _refine_ls_shell.number_reflns_obs 357 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _struct.entry_id 2B0V _struct.title 'NUDIX hydrolase from Nitrosomonas europaea.' _struct.pdbx_descriptor 'NUDIX hydrolase' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2B0V _struct_keywords.pdbx_keywords 'UNKNOWN FUNCTION' _struct_keywords.text ;structural genomics, NUDIX hydrolase, PSI, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, UNKNOWN FUNCTION ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 47 ? GLY A 61 ? SER A 45 GLY A 59 1 ? 15 HELX_P HELX_P2 2 ILE A 114 ? LYS A 120 ? ILE A 112 LYS A 118 1 ? 7 HELX_P HELX_P3 3 GLN A 121 ? HIS A 124 ? GLN A 119 HIS A 122 5 ? 4 HELX_P HELX_P4 4 PRO A 127 ? ALA A 138 ? PRO A 125 ALA A 136 1 ? 12 HELX_P HELX_P5 5 ASP A 145 ? LEU A 147 ? ASP A 143 LEU A 145 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A ALA 122 C ? ? ? 1_555 A MSE 123 N ? ? A ALA 120 A MSE 121 1_555 ? ? ? ? ? ? ? 1.338 ? covale2 covale ? ? A MSE 123 C ? ? ? 1_555 A HIS 124 N ? ? A MSE 121 A HIS 122 1_555 ? ? ? ? ? ? ? 1.337 ? covale3 covale ? ? A VAL 129 C ? ? ? 1_555 A MSE 130 N ? ? A VAL 127 A MSE 128 1_555 ? ? ? ? ? ? ? 1.336 ? covale4 covale ? ? A MSE 130 C ? ? ? 1_555 A GLN 131 N ? ? A MSE 128 A GLN 129 1_555 ? ? ? ? ? ? ? 1.331 ? metalc1 metalc ? ? C NA . NA ? ? ? 1_555 E HOH . O ? ? A NA 203 A HOH 234 1_555 ? ? ? ? ? ? ? 2.538 ? metalc2 metalc ? ? C NA . NA ? ? ? 1_555 E HOH . O ? ? A NA 203 A HOH 229 1_555 ? ? ? ? ? ? ? 2.551 ? metalc3 metalc ? ? C NA . NA ? ? ? 1_555 E HOH . O ? ? A NA 203 A HOH 243 1_555 ? ? ? ? ? ? ? 2.477 ? metalc4 metalc ? ? C NA . NA ? ? ? 1_555 E HOH . O ? ? A NA 203 A HOH 262 1_555 ? ? ? ? ? ? ? 2.345 ? metalc5 metalc ? ? C NA . NA ? ? ? 1_555 A GLN 148 OE1 ? ? A NA 203 A GLN 146 1_555 ? ? ? ? ? ? ? 2.349 ? metalc6 metalc ? ? C NA . NA ? ? ? 1_555 E HOH . O ? ? A NA 203 A HOH 246 8_555 ? ? ? ? ? ? ? 2.324 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 3 ? C ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ALA A 39 ? HIS A 41 ? ALA A 37 HIS A 39 A 2 ASN A 8 ? VAL A 14 ? ASN A 6 VAL A 12 A 3 THR A 82 ? PHE A 96 ? THR A 80 PHE A 94 A 4 HIS A 62 ? CYS A 77 ? HIS A 60 CYS A 75 A 5 TYR A 142 ? PRO A 143 ? TYR A 140 PRO A 141 B 1 GLU A 16 ? GLN A 17 ? GLU A 14 GLN A 15 B 2 LYS A 20 ? GLU A 26 ? LYS A 18 GLU A 24 B 3 LYS A 34 ? ASN A 36 ? LYS A 32 ASN A 34 C 1 GLU A 16 ? GLN A 17 ? GLU A 14 GLN A 15 C 2 LYS A 20 ? GLU A 26 ? LYS A 18 GLU A 24 C 3 ILE A 106 ? SER A 113 ? ILE A 104 SER A 111 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLY A 40 ? O GLY A 38 N VAL A 11 ? N VAL A 9 A 2 3 N ASN A 8 ? N ASN A 6 O THR A 83 ? O THR A 81 A 3 4 O TYR A 84 ? O TYR A 82 N TRP A 75 ? N TRP A 73 A 4 5 N LEU A 69 ? N LEU A 67 O TYR A 142 ? O TYR A 140 B 1 2 N GLN A 17 ? N GLN A 15 O LYS A 20 ? O LYS A 18 B 2 3 N GLU A 26 ? N GLU A 24 O LYS A 34 ? O LYS A 32 C 1 2 N GLN A 17 ? N GLN A 15 O LYS A 20 ? O LYS A 18 C 2 3 N GLU A 25 ? N GLU A 23 O VAL A 107 ? O VAL A 105 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE CL A 202' AC2 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE NA A 203' AC3 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE EDO A 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 ILE A 48 ? ILE A 46 . ? 3_655 ? 2 AC1 3 HIS A 74 ? HIS A 72 . ? 1_555 ? 3 AC1 3 HOH E . ? HOH A 213 . ? 3_655 ? 4 AC2 6 GLN A 148 ? GLN A 146 . ? 1_555 ? 5 AC2 6 HOH E . ? HOH A 229 . ? 1_555 ? 6 AC2 6 HOH E . ? HOH A 234 . ? 1_555 ? 7 AC2 6 HOH E . ? HOH A 243 . ? 1_555 ? 8 AC2 6 HOH E . ? HOH A 246 . ? 8_555 ? 9 AC2 6 HOH E . ? HOH A 262 . ? 1_555 ? 10 AC3 7 ALA A 39 ? ALA A 37 . ? 1_555 ? 11 AC3 7 GLY A 40 ? GLY A 38 . ? 1_555 ? 12 AC3 7 GLU A 55 ? GLU A 53 . ? 1_555 ? 13 AC3 7 GLU A 59 ? GLU A 57 . ? 1_555 ? 14 AC3 7 ARG A 125 ? ARG A 123 . ? 1_555 ? 15 AC3 7 HOH E . ? HOH A 223 . ? 1_555 ? 16 AC3 7 HOH E . ? HOH A 250 . ? 1_555 ? # _database_PDB_matrix.entry_id 2B0V _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2B0V _atom_sites.fract_transf_matrix[1][1] 0.018034 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015036 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013548 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N NA O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -1 ? ? ? A . n A 1 2 HIS 2 0 ? ? ? A . n A 1 3 MSE 3 1 ? ? ? A . n A 1 4 THR 4 2 ? ? ? A . n A 1 5 TRP 5 3 ? ? ? A . n A 1 6 LYS 6 4 4 LYS LYS A . n A 1 7 PRO 7 5 5 PRO PRO A . n A 1 8 ASN 8 6 6 ASN ASN A . n A 1 9 VAL 9 7 7 VAL VAL A . n A 1 10 THR 10 8 8 THR THR A . n A 1 11 VAL 11 9 9 VAL VAL A . n A 1 12 ALA 12 10 10 ALA ALA A . n A 1 13 ALA 13 11 11 ALA ALA A . n A 1 14 VAL 14 12 12 VAL VAL A . n A 1 15 ILE 15 13 13 ILE ILE A . n A 1 16 GLU 16 14 14 GLU GLU A . n A 1 17 GLN 17 15 15 GLN GLN A . n A 1 18 ASP 18 16 16 ASP ASP A . n A 1 19 ASP 19 17 17 ASP ASP A . n A 1 20 LYS 20 18 18 LYS LYS A . n A 1 21 TYR 21 19 19 TYR TYR A . n A 1 22 LEU 22 20 20 LEU LEU A . n A 1 23 LEU 23 21 21 LEU LEU A . n A 1 24 VAL 24 22 22 VAL VAL A . n A 1 25 GLU 25 23 23 GLU GLU A . n A 1 26 GLU 26 24 24 GLU GLU A . n A 1 27 ILE 27 25 25 ILE ILE A . n A 1 28 PRO 28 26 26 PRO PRO A . n A 1 29 ARG 29 27 27 ARG ARG A . n A 1 30 GLY 30 28 28 GLY GLY A . n A 1 31 THR 31 29 29 THR THR A . n A 1 32 ALA 32 30 30 ALA ALA A . n A 1 33 ILE 33 31 31 ILE ILE A . n A 1 34 LYS 34 32 32 LYS LYS A . n A 1 35 LEU 35 33 33 LEU LEU A . n A 1 36 ASN 36 34 34 ASN ASN A . n A 1 37 GLN 37 35 35 GLN GLN A . n A 1 38 PRO 38 36 36 PRO PRO A . n A 1 39 ALA 39 37 37 ALA ALA A . n A 1 40 GLY 40 38 38 GLY GLY A . n A 1 41 HIS 41 39 39 HIS HIS A . n A 1 42 LEU 42 40 40 LEU LEU A . n A 1 43 GLU 43 41 41 GLU GLU A . n A 1 44 PRO 44 42 42 PRO PRO A . n A 1 45 GLY 45 43 43 GLY GLY A . n A 1 46 GLU 46 44 44 GLU GLU A . n A 1 47 SER 47 45 45 SER SER A . n A 1 48 ILE 48 46 46 ILE ILE A . n A 1 49 ILE 49 47 47 ILE ILE A . n A 1 50 GLN 50 48 48 GLN GLN A . n A 1 51 ALA 51 49 49 ALA ALA A . n A 1 52 CYS 52 50 50 CYS CYS A . n A 1 53 SER 53 51 51 SER SER A . n A 1 54 ARG 54 52 52 ARG ARG A . n A 1 55 GLU 55 53 53 GLU GLU A . n A 1 56 VAL 56 54 54 VAL VAL A . n A 1 57 LEU 57 55 55 LEU LEU A . n A 1 58 GLU 58 56 56 GLU GLU A . n A 1 59 GLU 59 57 57 GLU GLU A . n A 1 60 THR 60 58 58 THR THR A . n A 1 61 GLY 61 59 59 GLY GLY A . n A 1 62 HIS 62 60 60 HIS HIS A . n A 1 63 SER 63 61 61 SER SER A . n A 1 64 PHE 64 62 62 PHE PHE A . n A 1 65 LEU 65 63 63 LEU LEU A . n A 1 66 PRO 66 64 64 PRO PRO A . n A 1 67 GLU 67 65 65 GLU GLU A . n A 1 68 VAL 68 66 66 VAL VAL A . n A 1 69 LEU 69 67 67 LEU LEU A . n A 1 70 THR 70 68 68 THR THR A . n A 1 71 GLY 71 69 69 GLY GLY A . n A 1 72 ILE 72 70 70 ILE ILE A . n A 1 73 TYR 73 71 71 TYR TYR A . n A 1 74 HIS 74 72 72 HIS HIS A . n A 1 75 TRP 75 73 73 TRP TRP A . n A 1 76 THR 76 74 74 THR THR A . n A 1 77 CYS 77 75 75 CYS CYS A . n A 1 78 ALA 78 76 76 ALA ALA A . n A 1 79 SER 79 77 77 SER SER A . n A 1 80 ASN 80 78 78 ASN ASN A . n A 1 81 GLY 81 79 79 GLY GLY A . n A 1 82 THR 82 80 80 THR THR A . n A 1 83 THR 83 81 81 THR THR A . n A 1 84 TYR 84 82 82 TYR TYR A . n A 1 85 LEU 85 83 83 LEU LEU A . n A 1 86 ARG 86 84 84 ARG ARG A . n A 1 87 PHE 87 85 85 PHE PHE A . n A 1 88 THR 88 86 86 THR THR A . n A 1 89 PHE 89 87 87 PHE PHE A . n A 1 90 SER 90 88 88 SER SER A . n A 1 91 GLY 91 89 89 GLY GLY A . n A 1 92 GLN 92 90 90 GLN GLN A . n A 1 93 VAL 93 91 91 VAL VAL A . n A 1 94 VAL 94 92 92 VAL VAL A . n A 1 95 SER 95 93 93 SER SER A . n A 1 96 PHE 96 94 94 PHE PHE A . n A 1 97 ASP 97 95 95 ASP ASP A . n A 1 98 PRO 98 96 96 PRO PRO A . n A 1 99 ASP 99 97 97 ASP ASP A . n A 1 100 ARG 100 98 98 ARG ARG A . n A 1 101 LYS 101 99 99 LYS LYS A . n A 1 102 LEU 102 100 100 LEU LEU A . n A 1 103 ASP 103 101 101 ASP ASP A . n A 1 104 THR 104 102 102 THR THR A . n A 1 105 GLY 105 103 103 GLY GLY A . n A 1 106 ILE 106 104 104 ILE ILE A . n A 1 107 VAL 107 105 105 VAL VAL A . n A 1 108 ARG 108 106 106 ARG ARG A . n A 1 109 ALA 109 107 107 ALA ALA A . n A 1 110 ALA 110 108 108 ALA ALA A . n A 1 111 TRP 111 109 109 TRP TRP A . n A 1 112 PHE 112 110 110 PHE PHE A . n A 1 113 SER 113 111 111 SER SER A . n A 1 114 ILE 114 112 112 ILE ILE A . n A 1 115 ASP 115 113 113 ASP ASP A . n A 1 116 GLU 116 114 114 GLU GLU A . n A 1 117 ILE 117 115 115 ILE ILE A . n A 1 118 ARG 118 116 116 ARG ARG A . n A 1 119 ALA 119 117 117 ALA ALA A . n A 1 120 LYS 120 118 118 LYS LYS A . n A 1 121 GLN 121 119 119 GLN GLN A . n A 1 122 ALA 122 120 120 ALA ALA A . n A 1 123 MSE 123 121 121 MSE MSE A . n A 1 124 HIS 124 122 122 HIS HIS A . n A 1 125 ARG 125 123 123 ARG ARG A . n A 1 126 THR 126 124 124 THR THR A . n A 1 127 PRO 127 125 125 PRO PRO A . n A 1 128 LEU 128 126 126 LEU LEU A . n A 1 129 VAL 129 127 127 VAL VAL A . n A 1 130 MSE 130 128 128 MSE MSE A . n A 1 131 GLN 131 129 129 GLN GLN A . n A 1 132 CYS 132 130 130 CYS CYS A . n A 1 133 ILE 133 131 131 ILE ILE A . n A 1 134 GLU 134 132 132 GLU GLU A . n A 1 135 ASP 135 133 133 ASP ASP A . n A 1 136 TYR 136 134 134 TYR TYR A . n A 1 137 HIS 137 135 135 HIS HIS A . n A 1 138 ALA 138 136 136 ALA ALA A . n A 1 139 GLY 139 137 137 GLY GLY A . n A 1 140 LYS 140 138 138 LYS LYS A . n A 1 141 ARG 141 139 139 ARG ARG A . n A 1 142 TYR 142 140 140 TYR TYR A . n A 1 143 PRO 143 141 141 PRO PRO A . n A 1 144 LEU 144 142 142 LEU LEU A . n A 1 145 ASP 145 143 143 ASP ASP A . n A 1 146 ILE 146 144 144 ILE ILE A . n A 1 147 LEU 147 145 145 LEU LEU A . n A 1 148 GLN 148 146 146 GLN GLN A . n A 1 149 TYR 149 147 147 TYR TYR A . n A 1 150 TYR 150 148 148 TYR TYR A . n A 1 151 ASP 151 149 149 ASP ASP A . n A 1 152 GLY 152 150 150 GLY GLY A . n A 1 153 SER 153 151 151 SER SER A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL 1 202 202 CL CL A . C 3 NA 1 203 203 NA NA A . D 4 EDO 1 201 201 EDO EDO A . E 5 HOH 1 204 1 HOH HOH A . E 5 HOH 2 205 2 HOH HOH A . E 5 HOH 3 206 3 HOH HOH A . E 5 HOH 4 207 4 HOH HOH A . E 5 HOH 5 208 5 HOH HOH A . E 5 HOH 6 209 6 HOH HOH A . E 5 HOH 7 210 7 HOH HOH A . E 5 HOH 8 211 8 HOH HOH A . E 5 HOH 9 212 9 HOH HOH A . E 5 HOH 10 213 10 HOH HOH A . E 5 HOH 11 214 11 HOH HOH A . E 5 HOH 12 215 12 HOH HOH A . E 5 HOH 13 216 13 HOH HOH A . E 5 HOH 14 217 14 HOH HOH A . E 5 HOH 15 218 15 HOH HOH A . E 5 HOH 16 219 16 HOH HOH A . E 5 HOH 17 220 17 HOH HOH A . E 5 HOH 18 221 18 HOH HOH A . E 5 HOH 19 222 19 HOH HOH A . E 5 HOH 20 223 20 HOH HOH A . E 5 HOH 21 224 21 HOH HOH A . E 5 HOH 22 225 22 HOH HOH A . E 5 HOH 23 226 24 HOH HOH A . E 5 HOH 24 227 25 HOH HOH A . E 5 HOH 25 228 26 HOH HOH A . E 5 HOH 26 229 27 HOH HOH A . E 5 HOH 27 230 28 HOH HOH A . E 5 HOH 28 231 29 HOH HOH A . E 5 HOH 29 232 30 HOH HOH A . E 5 HOH 30 233 31 HOH HOH A . E 5 HOH 31 234 32 HOH HOH A . E 5 HOH 32 235 33 HOH HOH A . E 5 HOH 33 236 34 HOH HOH A . E 5 HOH 34 237 35 HOH HOH A . E 5 HOH 35 238 36 HOH HOH A . E 5 HOH 36 239 37 HOH HOH A . E 5 HOH 37 240 38 HOH HOH A . E 5 HOH 38 241 39 HOH HOH A . E 5 HOH 39 242 40 HOH HOH A . E 5 HOH 40 243 41 HOH HOH A . E 5 HOH 41 244 42 HOH HOH A . E 5 HOH 42 245 43 HOH HOH A . E 5 HOH 43 246 44 HOH HOH A . E 5 HOH 44 247 45 HOH HOH A . E 5 HOH 45 248 46 HOH HOH A . E 5 HOH 46 249 47 HOH HOH A . E 5 HOH 47 250 48 HOH HOH A . E 5 HOH 48 251 49 HOH HOH A . E 5 HOH 49 252 50 HOH HOH A . E 5 HOH 50 253 51 HOH HOH A . E 5 HOH 51 254 53 HOH HOH A . E 5 HOH 52 255 54 HOH HOH A . E 5 HOH 53 256 55 HOH HOH A . E 5 HOH 54 257 56 HOH HOH A . E 5 HOH 55 258 57 HOH HOH A . E 5 HOH 56 259 58 HOH HOH A . E 5 HOH 57 260 59 HOH HOH A . E 5 HOH 58 261 60 HOH HOH A . E 5 HOH 59 262 61 HOH HOH A . E 5 HOH 60 263 62 HOH HOH A . E 5 HOH 61 264 63 HOH HOH A . E 5 HOH 62 265 64 HOH HOH A . E 5 HOH 63 266 65 HOH HOH A . E 5 HOH 64 267 66 HOH HOH A . E 5 HOH 65 268 67 HOH HOH A . E 5 HOH 66 269 68 HOH HOH A . E 5 HOH 67 270 69 HOH HOH A . E 5 HOH 68 271 70 HOH HOH A . E 5 HOH 69 272 71 HOH HOH A . E 5 HOH 70 273 72 HOH HOH A . E 5 HOH 71 274 73 HOH HOH A . E 5 HOH 72 275 74 HOH HOH A . E 5 HOH 73 276 75 HOH HOH A . E 5 HOH 74 277 76 HOH HOH A . E 5 HOH 75 278 77 HOH HOH A . E 5 HOH 76 279 79 HOH HOH A . E 5 HOH 77 280 80 HOH HOH A . E 5 HOH 78 281 81 HOH HOH A . E 5 HOH 79 282 82 HOH HOH A . E 5 HOH 80 283 83 HOH HOH A . E 5 HOH 81 284 84 HOH HOH A . E 5 HOH 82 285 85 HOH HOH A . E 5 HOH 83 286 86 HOH HOH A . E 5 HOH 84 287 87 HOH HOH A . E 5 HOH 85 288 88 HOH HOH A . E 5 HOH 86 289 89 HOH HOH A . E 5 HOH 87 290 90 HOH HOH A . E 5 HOH 88 291 91 HOH HOH A . E 5 HOH 89 292 92 HOH HOH A . E 5 HOH 90 293 93 HOH HOH A . E 5 HOH 91 294 94 HOH HOH A . E 5 HOH 92 295 95 HOH HOH A . E 5 HOH 93 296 96 HOH HOH A . E 5 HOH 94 297 97 HOH HOH A . E 5 HOH 95 298 98 HOH HOH A . E 5 HOH 96 299 99 HOH HOH A . E 5 HOH 97 300 100 HOH HOH A . E 5 HOH 98 301 101 HOH HOH A . E 5 HOH 99 302 102 HOH HOH A . E 5 HOH 100 303 103 HOH HOH A . E 5 HOH 101 304 104 HOH HOH A . E 5 HOH 102 305 105 HOH HOH A . E 5 HOH 103 306 106 HOH HOH A . E 5 HOH 104 307 107 HOH HOH A . E 5 HOH 105 308 108 HOH HOH A . E 5 HOH 106 309 109 HOH HOH A . E 5 HOH 107 310 110 HOH HOH A . E 5 HOH 108 311 111 HOH HOH A . E 5 HOH 109 312 112 HOH HOH A . E 5 HOH 110 313 113 HOH HOH A . E 5 HOH 111 314 114 HOH HOH A . E 5 HOH 112 315 115 HOH HOH A . E 5 HOH 113 316 116 HOH HOH A . E 5 HOH 114 317 117 HOH HOH A . E 5 HOH 115 318 118 HOH HOH A . E 5 HOH 116 319 119 HOH HOH A . E 5 HOH 117 320 120 HOH HOH A . E 5 HOH 118 321 121 HOH HOH A . E 5 HOH 119 322 122 HOH HOH A . E 5 HOH 120 323 123 HOH HOH A . E 5 HOH 121 324 124 HOH HOH A . E 5 HOH 122 325 125 HOH HOH A . E 5 HOH 123 326 126 HOH HOH A . E 5 HOH 124 327 127 HOH HOH A . E 5 HOH 125 328 128 HOH HOH A . E 5 HOH 126 329 129 HOH HOH A . E 5 HOH 127 330 130 HOH HOH A . E 5 HOH 128 331 131 HOH HOH A . E 5 HOH 129 332 132 HOH HOH A . E 5 HOH 130 333 133 HOH HOH A . E 5 HOH 131 334 134 HOH HOH A . E 5 HOH 132 335 135 HOH HOH A . E 5 HOH 133 336 136 HOH HOH A . E 5 HOH 134 337 137 HOH HOH A . E 5 HOH 135 338 138 HOH HOH A . E 5 HOH 136 339 139 HOH HOH A . E 5 HOH 137 340 140 HOH HOH A . E 5 HOH 138 341 141 HOH HOH A . E 5 HOH 139 342 142 HOH HOH A . E 5 HOH 140 343 143 HOH HOH A . E 5 HOH 141 344 144 HOH HOH A . E 5 HOH 142 345 145 HOH HOH A . E 5 HOH 143 346 146 HOH HOH A . E 5 HOH 144 347 147 HOH HOH A . E 5 HOH 145 348 148 HOH HOH A . E 5 HOH 146 349 149 HOH HOH A . E 5 HOH 147 350 150 HOH HOH A . E 5 HOH 148 351 151 HOH HOH A . E 5 HOH 149 352 152 HOH HOH A . E 5 HOH 150 353 153 HOH HOH A . E 5 HOH 151 354 154 HOH HOH A . E 5 HOH 152 355 155 HOH HOH A . E 5 HOH 153 356 156 HOH HOH A . E 5 HOH 154 357 157 HOH HOH A . E 5 HOH 155 358 158 HOH HOH A . E 5 HOH 156 359 159 HOH HOH A . E 5 HOH 157 360 160 HOH HOH A . E 5 HOH 158 361 161 HOH HOH A . E 5 HOH 159 362 162 HOH HOH A . E 5 HOH 160 363 163 HOH HOH A . E 5 HOH 161 364 164 HOH HOH A . E 5 HOH 162 365 165 HOH HOH A . E 5 HOH 163 366 166 HOH HOH A . E 5 HOH 164 367 167 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 123 A MSE 121 ? MET SELENOMETHIONINE 2 A MSE 130 A MSE 128 ? MET SELENOMETHIONINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 software_defined_assembly PISA,PQS dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E 2 1,2 A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 2 'ABSA (A^2)' 2750 ? 2 MORE -50 ? 2 'SSA (A^2)' 14800 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 3_655 -x+1,y,-z+1/2 -1.0000000000 0.0000000000 0.0000000000 55.4500000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 36.9060000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 367 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id E _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? E HOH . ? A HOH 234 ? 1_555 NA ? C NA . ? A NA 203 ? 1_555 O ? E HOH . ? A HOH 229 ? 1_555 85.3 ? 2 O ? E HOH . ? A HOH 234 ? 1_555 NA ? C NA . ? A NA 203 ? 1_555 O ? E HOH . ? A HOH 243 ? 1_555 164.2 ? 3 O ? E HOH . ? A HOH 229 ? 1_555 NA ? C NA . ? A NA 203 ? 1_555 O ? E HOH . ? A HOH 243 ? 1_555 82.0 ? 4 O ? E HOH . ? A HOH 234 ? 1_555 NA ? C NA . ? A NA 203 ? 1_555 O ? E HOH . ? A HOH 262 ? 1_555 93.4 ? 5 O ? E HOH . ? A HOH 229 ? 1_555 NA ? C NA . ? A NA 203 ? 1_555 O ? E HOH . ? A HOH 262 ? 1_555 89.9 ? 6 O ? E HOH . ? A HOH 243 ? 1_555 NA ? C NA . ? A NA 203 ? 1_555 O ? E HOH . ? A HOH 262 ? 1_555 96.0 ? 7 O ? E HOH . ? A HOH 234 ? 1_555 NA ? C NA . ? A NA 203 ? 1_555 OE1 ? A GLN 148 ? A GLN 146 ? 1_555 87.5 ? 8 O ? E HOH . ? A HOH 229 ? 1_555 NA ? C NA . ? A NA 203 ? 1_555 OE1 ? A GLN 148 ? A GLN 146 ? 1_555 96.3 ? 9 O ? E HOH . ? A HOH 243 ? 1_555 NA ? C NA . ? A NA 203 ? 1_555 OE1 ? A GLN 148 ? A GLN 146 ? 1_555 84.5 ? 10 O ? E HOH . ? A HOH 262 ? 1_555 NA ? C NA . ? A NA 203 ? 1_555 OE1 ? A GLN 148 ? A GLN 146 ? 1_555 173.8 ? 11 O ? E HOH . ? A HOH 234 ? 1_555 NA ? C NA . ? A NA 203 ? 1_555 O ? E HOH . ? A HOH 246 ? 8_555 101.8 ? 12 O ? E HOH . ? A HOH 229 ? 1_555 NA ? C NA . ? A NA 203 ? 1_555 O ? E HOH . ? A HOH 246 ? 8_555 170.8 ? 13 O ? E HOH . ? A HOH 243 ? 1_555 NA ? C NA . ? A NA 203 ? 1_555 O ? E HOH . ? A HOH 246 ? 8_555 91.9 ? 14 O ? E HOH . ? A HOH 262 ? 1_555 NA ? C NA . ? A NA 203 ? 1_555 O ? E HOH . ? A HOH 246 ? 8_555 83.8 ? 15 OE1 ? A GLN 148 ? A GLN 146 ? 1_555 NA ? C NA . ? A NA 203 ? 1_555 O ? E HOH . ? A HOH 246 ? 8_555 90.0 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-09-27 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2018-01-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Derived calculations' 4 3 'Structure model' 'Version format compliance' 5 4 'Structure model' 'Structure summary' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 4 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category audit_author # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 4 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_audit_author.name' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 17.8767 _pdbx_refine_tls.origin_y 14.4585 _pdbx_refine_tls.origin_z 7.2567 _pdbx_refine_tls.T[1][1] -0.0280 _pdbx_refine_tls.T[2][2] -0.0204 _pdbx_refine_tls.T[3][3] -0.0270 _pdbx_refine_tls.T[1][2] 0.0045 _pdbx_refine_tls.T[1][3] -0.0009 _pdbx_refine_tls.T[2][3] 0.0044 _pdbx_refine_tls.L[1][1] 1.2649 _pdbx_refine_tls.L[2][2] 0.2321 _pdbx_refine_tls.L[3][3] 1.0291 _pdbx_refine_tls.L[1][2] 0.2952 _pdbx_refine_tls.L[1][3] 0.6432 _pdbx_refine_tls.L[2][3] 0.2419 _pdbx_refine_tls.S[1][1] -0.0329 _pdbx_refine_tls.S[1][2] 0.0440 _pdbx_refine_tls.S[1][3] 0.0298 _pdbx_refine_tls.S[2][1] -0.0022 _pdbx_refine_tls.S[2][2] -0.0106 _pdbx_refine_tls.S[2][3] 0.0180 _pdbx_refine_tls.S[3][1] 0.0102 _pdbx_refine_tls.S[3][2] 0.0001 _pdbx_refine_tls.S[3][3] 0.0435 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 4 _pdbx_refine_tls_group.beg_label_asym_id A _pdbx_refine_tls_group.beg_label_seq_id 6 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 151 _pdbx_refine_tls_group.end_label_asym_id A _pdbx_refine_tls_group.end_label_seq_id 153 _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.selection_details ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0005 ? 1 HKL-2000 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 SOLVE phasing . ? 4 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 273 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 366 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.11 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -1 ? A GLY 1 2 1 Y 1 A HIS 0 ? A HIS 2 3 1 Y 1 A MSE 1 ? A MSE 3 4 1 Y 1 A THR 2 ? A THR 4 5 1 Y 1 A TRP 3 ? A TRP 5 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CHLORIDE ION' CL 3 'SODIUM ION' NA 4 1,2-ETHANEDIOL EDO 5 water HOH #