HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 19-SEP-05 2B2M OBSLTE 15-NOV-05 2B2M 2EXN TITLE SOLUTION STRUCTURE FOR THE PROTEIN CODED BY GENE LOCUS TITLE 2 BB0938 OF BORDETELLA BRONCHISEPTICA. NORTHEAST STRUCTURAL TITLE 3 GENOMICS TARGET BOR11. COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN BOR11; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BORDETELLA BRONCHISEPTICA; SOURCE 3 ORGANISM_COMMON: BACTERIA; SOURCE 4 GENE: BB0938; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_COMMON: BACTERIA; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PMGK; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PET21D; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PBOR11-21 KEYWDS BETA BARREL CONTAINING FOLD; AUTOSTRUCTURE; AUTOASSIGN; NMR KEYWDS 2 STRUCTURE; BOR11 , STRUCTURAL GENOMICS, PSI, PROTEIN KEYWDS 3 STRUCTURE INITIATIVE, NORTHEAST STRUCTURAL GENOMICS KEYWDS 4 CONSORTIUM, NESG EXPDTA NMR, 10 STRUCTURES AUTHOR P.ROSSI,T.RAMELOT,R.XIAO,C.K.HO,L-C.MA,T.B.ACTON, AUTHOR 2 M.A.KENNEDY,G.T.MONTELIONE,NORTHEAST STRUCTURAL GENOMICS AUTHOR 3 CONSORTIUM (NESG) REVDAT 2 15-NOV-05 2B2M 0 OBSLTE REVDAT 1 01-NOV-05 2B2M 0 JRNL AUTH P.ROSSI,T.RAMELOT,R.XIAO,C.K.HO,L-C.MA,T.B.ACTON, JRNL AUTH 2 M.A.KENNEDY,G.T.MONTELIONE JRNL TITL SOLUTION STRUCTURE FOR THE PROTEIN CODED BY GENE JRNL TITL 2 LOCUS BB0938 OF BORDETELLA BRONCHISEPTICA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2B2M COMPLIES WITH FORMAT V. 2.3, 09-JULY-1998 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PRAGUE ON 29-SEP-2005. REMARK 100 THE RCSB ID CODE IS RCSB034598. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 100 MM NACL REMARK 210 PRESSURE : ATMOSPHERIC ATM REMARK 210 SAMPLE CONTENTS : 0.7MM BOR11 (U-13C,15N), REMARK 210 0.02% NAN3, 10MM DTT, 5MM REMARK 210 CACL2, 100MM NACL, 20MM MES, REMARK 210 PH 6.5; 0.5MM BOR11 (U-13C, REMARK 210 15N), 0.02% NAN3, 10MM DTT, REMARK 210 5MM CACL2, 100MM NACL, 20MM REMARK 210 MES, PH 6.5; 0.8MM BOR11 (5% REMARK 210 13C,U-15N), 0.02% NAN3, 10MM REMARK 210 DTT, 5MM CACL2, 100MM NACL, REMARK 210 20MM MES, PH 6.5 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY, 3D_ REMARK 210 15N-SEPARATED_NOESY, 4D_13C- REMARK 210 SEPARATED_NOESY, HNCA-J, HI- REMARK 210 RES 13C-HSQC FOR VL REMARK 210 STEREOSPECIFIC, HET-NOE REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ, 750 MHZ, 800 MHZ, REMARK 210 500 MHZ REMARK 210 SPECTROMETER MODEL : INOVA, AVANCE REMARK 210 SPECTROMETER MANUFACTURER : VARIAN, BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : VNMR 6.1C, XWINNMR 3.5, REMARK 210 NMRPIPE 2.1, AUTOSTRUCTURE REMARK 210 2.1.1, AUTOASSIGN 1.15, SPARKY REMARK 210 3.91, XPLOR(NIH) 2.0.6, DYANA REMARK 210 1.5 REMARK 210 METHOD USED : CS ASSIGNMENT: BACKBONE REMARK 210 AUTOASSIGN, MANUAL SIDECHAIN REMARK 210 HCCH-COSY AND TOCSYS. REMARK 210 AUTOSTRUCTURE FOR NOESY REMARK 210 ASSIGN. HYPER DIHEDRAL, DYANA, REMARK 210 XPLOR(NIH), AND CNS FORCE- REMARK 210 FIELD FOR SIMULATED ANNEALING REMARK 210 (DYANA,XPLOR RUN WITHIN REMARK 210 AUTOSTRUCTURE GUI) REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 56 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: AUTOQF SCORES AFTER CNS WITH EXPLICIT H2O REFINEMENT: REMARK 210 FINAL M-SCORE: 0.188 FINAL DP-SCORE: 0.73 (RECALL=0.986, REMARK 210 PRECISION=0.857, F-MEASURE=0.917) REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 1 HIS A 131 REMARK 465 1 HIS A 132 REMARK 465 1 HIS A 133 REMARK 465 1 HIS A 134 REMARK 465 1 HIS A 135 REMARK 465 1 HIS A 136 REMARK 465 2 HIS A 131 REMARK 465 2 HIS A 132 REMARK 465 2 HIS A 133 REMARK 465 2 HIS A 134 REMARK 465 2 HIS A 135 REMARK 465 2 HIS A 136 REMARK 465 3 HIS A 131 REMARK 465 3 HIS A 132 REMARK 465 3 HIS A 133 REMARK 465 3 HIS A 134 REMARK 465 3 HIS A 135 REMARK 465 3 HIS A 136 REMARK 465 4 HIS A 131 REMARK 465 4 HIS A 132 REMARK 465 4 HIS A 133 REMARK 465 4 HIS A 134 REMARK 465 4 HIS A 135 REMARK 465 4 HIS A 136 REMARK 465 5 HIS A 131 REMARK 465 5 HIS A 132 REMARK 465 5 HIS A 133 REMARK 465 5 HIS A 134 REMARK 465 5 HIS A 135 REMARK 465 5 HIS A 136 REMARK 465 6 HIS A 131 REMARK 465 6 HIS A 132 REMARK 465 6 HIS A 133 REMARK 465 6 HIS A 134 REMARK 465 6 HIS A 135 REMARK 465 6 HIS A 136 REMARK 465 7 HIS A 131 REMARK 465 7 HIS A 132 REMARK 465 7 HIS A 133 REMARK 465 7 HIS A 134 REMARK 465 7 HIS A 135 REMARK 465 7 HIS A 136 REMARK 465 8 HIS A 131 REMARK 465 8 HIS A 132 REMARK 465 8 HIS A 133 REMARK 465 8 HIS A 134 REMARK 465 8 HIS A 135 REMARK 465 8 HIS A 136 REMARK 465 9 HIS A 131 REMARK 465 9 HIS A 132 REMARK 465 9 HIS A 133 REMARK 465 9 HIS A 134 REMARK 465 9 HIS A 135 REMARK 465 9 HIS A 136 REMARK 465 10 HIS A 131 REMARK 465 10 HIS A 132 REMARK 465 10 HIS A 133 REMARK 465 10 HIS A 134 REMARK 465 10 HIS A 135 REMARK 465 10 HIS A 136 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES: ENGH AND HUBER, 1991 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 7 ARG A 53 N - CA - C ANGL. DEV. = -4.8 DEGREES REMARK 500 8 ARG A 53 N - CA - C ANGL. DEV. = -5.0 DEGREES REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 VAL A 124 -62.01 75.54 REMARK 500 1 TRP A 126 136.19 77.07 REMARK 500 3 ALA A 122 -61.85 71.16 REMARK 500 3 VAL A 124 -76.94 65.14 REMARK 500 3 ARG A 125 128.63 72.12 REMARK 500 4 VAL A 124 -88.11 73.77 REMARK 500 4 ARG A 125 137.49 68.14 REMARK 500 5 THR A 3 -71.34 61.41 REMARK 500 6 VAL A 124 -49.76 74.30 REMARK 500 6 ARG A 125 -75.53 72.37 REMARK 500 7 ALA A 122 -54.66 67.13 REMARK 500 7 VAL A 124 -79.79 63.56 REMARK 500 7 ARG A 125 133.38 82.61 REMARK 500 8 THR A 3 141.41 74.79 REMARK 500 8 LEU A 129 -111.99 66.98 REMARK 500 9 TRP A 126 148.05 72.03 REMARK 500 10 VAL A 124 -75.83 75.78 REMARK 500 10 TRP A 126 147.00 70.40 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6693 RELATED DB: BMRB REMARK 900 COMPLETE NMR RESONANCE ASSIGNMENT. CONTAINS RAW DATA FILES REMARK 900 RELATED ID: BER44 RELATED DB: TARGETDB DBREF 2B2M A 1 120 UNP Q7WNU7 Q7WNU7_BORBR 1 120 SEQADV 2B2M GLU A 95 UNP Q7WNU7 ASP 95 CONFLICT SEQADV 2B2M MET A 121 UNP Q7WNU7 HIS TAG SEQADV 2B2M ALA A 122 UNP Q7WNU7 HIS TAG SEQADV 2B2M GLU A 123 UNP Q7WNU7 HIS TAG SEQADV 2B2M VAL A 124 UNP Q7WNU7 HIS TAG SEQADV 2B2M ARG A 125 UNP Q7WNU7 HIS TAG SEQADV 2B2M TRP A 126 UNP Q7WNU7 HIS TAG SEQADV 2B2M PRO A 127 UNP Q7WNU7 HIS TAG SEQADV 2B2M SER A 128 UNP Q7WNU7 HIS TAG SEQADV 2B2M LEU A 129 UNP Q7WNU7 HIS TAG SEQADV 2B2M GLU A 130 UNP Q7WNU7 HIS TAG SEQADV 2B2M HIS A 131 UNP Q7WNU7 HIS TAG SEQADV 2B2M HIS A 132 UNP Q7WNU7 HIS TAG SEQADV 2B2M HIS A 133 UNP Q7WNU7 HIS TAG SEQADV 2B2M HIS A 134 UNP Q7WNU7 HIS TAG SEQADV 2B2M HIS A 135 UNP Q7WNU7 HIS TAG SEQADV 2B2M HIS A 136 UNP Q7WNU7 HIS TAG SEQRES 1 A 136 MET SER THR THR ALA TYR GLN PRO ILE ALA GLU CYS GLY SEQRES 2 A 136 ALA THR THR GLN SER GLU ALA ALA ALA TYR GLN LYS ARG SEQRES 3 A 136 TRP LEU VAL ALA ASN ASP ALA GLY GLN TRP LEU ASN ARG SEQRES 4 A 136 ASP LEU CYS PRO ARG LEU ALA GLU VAL SER VAL GLU LEU SEQRES 5 A 136 ARG MET GLY TYR LEU VAL LEU LYS ALA PRO GLY MET LEU SEQRES 6 A 136 ARG LEU ASP ILE PRO LEU ASP VAL ILE GLU ASP ASP ASP SEQRES 7 A 136 SER VAL ARG TYR GLN MET LEU VAL GLY GLU GLN THR VAL SEQRES 8 A 136 ASP VAL VAL GLU GLU GLY GLU LEU ALA ALA ALA TRP ILE SEQRES 9 A 136 SER ASN HIS ALA GLY VAL PRO CYS ARG ILE LEU LYS VAL SEQRES 10 A 136 HIS PRO ASP MET ALA GLU VAL ARG TRP PRO SER LEU GLU SEQRES 11 A 136 HIS HIS HIS HIS HIS HIS HELIX 1 1 GLN A 17 TYR A 23 5 7 HELIX 2 2 CYS A 42 VAL A 48 5 7 HELIX 3 3 GLY A 97 ALA A 108 1 12 SHEET 1 A 5 TRP A 36 LEU A 37 0 SHEET 2 A 5 TRP A 27 ALA A 30 -1 N VAL A 29 O LEU A 37 SHEET 3 A 5 ARG A 113 VAL A 117 -1 O LEU A 115 N LEU A 28 SHEET 4 A 5 GLN A 89 GLU A 95 -1 N VAL A 94 O LYS A 116 SHEET 5 A 5 ARG A 81 VAL A 86 -1 N TYR A 82 O VAL A 93 SHEET 1 B 3 SER A 49 ARG A 53 0 SHEET 2 B 3 TYR A 56 LYS A 60 -1 O LYS A 60 N SER A 49 SHEET 3 B 3 ARG A 66 PRO A 70 -1 O ILE A 69 N LEU A 57 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1