data_2B5S # _entry.id 2B5S # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.398 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2B5S pdb_00002b5s 10.2210/pdb2b5s/pdb RCSB RCSB034709 ? ? WWPDB D_1000034709 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-11-29 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-08-23 5 'Structure model' 1 4 2024-10-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' 7 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' struct_ref_seq_dif 6 4 'Structure model' struct_site 7 5 'Structure model' pdbx_entry_details 8 5 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ref_seq_dif.details' 4 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2B5S _pdbx_database_status.recvd_initial_deposition_date 2005-09-29 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 2ALG _pdbx_database_related.details 'Crystal structure of peach Pru p3, the prototypic member of the family of plant non-specific lipid transfer protein pan-allergens' _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Pasquato, N.' 1 'Berni, R.' 2 'Folli, C.' 3 'Folloni, S.' 4 'Cianci, M.' 5 'Pantano, S.' 6 'Helliwell, R.J.' 7 'Zanotti, G.' 8 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Crystal Structure of Peach Pru p 3, the Prototypic Member of the Family of Plant Non-specific Lipid Transfer Protein Pan-allergens' J.Mol.Biol. 356 684 694 2006 JMOBAK UK 0022-2836 0070 ? 16388823 10.1016/j.jmb.2005.11.063 1 'High-resolution crystal structure of the non-specific lipid-transfer protein from maize seedling' Structure 3 189 199 1995 STRUE6 UK 0969-2126 2005 ? ? ? 2 'Identification of IgE-binding epitopes of the major peach allergen Pru p 3' 'J.Allergy Clin.Immunol.' 112 599 605 2003 ? US 0091-6749 ? ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Pasquato, N.' 1 ? primary 'Berni, R.' 2 ? primary 'Folli, C.' 3 ? primary 'Folloni, S.' 4 ? primary 'Cianci, M.' 5 ? primary 'Pantano, S.' 6 ? primary 'Helliwell, J.R.' 7 ? primary 'Zanotti, G.' 8 ? 1 'Shin, D.H.' 9 ? 1 'Lee, J.Y.' 10 ? 1 'Hwang, K.Y.' 11 ? 1 'Kim, K.K.' 12 ? 1 'Suk, S.W.' 13 ? 2 'Garcia-Casado, G.' 14 ? 2 'Pacios, F.L.' 15 ? 2 'Diaz-Perales, A.' 16 ? 2 'Sanchez-Monge, R.' 17 ? 2 'Lombardero, M.' 18 ? 2 'Garcia-Selles, J.F.' 19 ? 2 'Polo, F.' 20 ? 2 'Barber, D.' 21 ? 2 'Salcedo, G.' 22 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Non-specific lipid transfer protein' 9282.742 2 ? ? ? ? 2 non-polymer syn 'LAURIC ACID' 200.318 2 ? ? ? ? 3 non-polymer syn HEPTANE 100.202 1 ? ? ? ? 4 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 5 water nat water 18.015 148 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MITCGQVSSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVSIPY KISASTNCATVK ; _entity_poly.pdbx_seq_one_letter_code_can ;MITCGQVSSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVSIPY KISASTNCATVK ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'LAURIC ACID' DAO 3 HEPTANE HP6 4 'SULFATE ION' SO4 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ILE n 1 3 THR n 1 4 CYS n 1 5 GLY n 1 6 GLN n 1 7 VAL n 1 8 SER n 1 9 SER n 1 10 SER n 1 11 LEU n 1 12 ALA n 1 13 PRO n 1 14 CYS n 1 15 ILE n 1 16 PRO n 1 17 TYR n 1 18 VAL n 1 19 ARG n 1 20 GLY n 1 21 GLY n 1 22 GLY n 1 23 ALA n 1 24 VAL n 1 25 PRO n 1 26 PRO n 1 27 ALA n 1 28 CYS n 1 29 CYS n 1 30 ASN n 1 31 GLY n 1 32 ILE n 1 33 ARG n 1 34 ASN n 1 35 VAL n 1 36 ASN n 1 37 ASN n 1 38 LEU n 1 39 ALA n 1 40 ARG n 1 41 THR n 1 42 THR n 1 43 PRO n 1 44 ASP n 1 45 ARG n 1 46 GLN n 1 47 ALA n 1 48 ALA n 1 49 CYS n 1 50 ASN n 1 51 CYS n 1 52 LEU n 1 53 LYS n 1 54 GLN n 1 55 LEU n 1 56 SER n 1 57 ALA n 1 58 SER n 1 59 VAL n 1 60 PRO n 1 61 GLY n 1 62 VAL n 1 63 ASN n 1 64 PRO n 1 65 ASN n 1 66 ASN n 1 67 ALA n 1 68 ALA n 1 69 ALA n 1 70 LEU n 1 71 PRO n 1 72 GLY n 1 73 LYS n 1 74 CYS n 1 75 GLY n 1 76 VAL n 1 77 SER n 1 78 ILE n 1 79 PRO n 1 80 TYR n 1 81 LYS n 1 82 ILE n 1 83 SER n 1 84 ALA n 1 85 SER n 1 86 THR n 1 87 ASN n 1 88 CYS n 1 89 ALA n 1 90 THR n 1 91 VAL n 1 92 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name peach _entity_src_gen.gene_src_genus Prunus _entity_src_gen.pdbx_gene_src_gene LTP _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Prunus persica' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 3760 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 Origami (DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET11b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DAO non-polymer . 'LAURIC ACID' ? 'C12 H24 O2' 200.318 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 HP6 non-polymer . HEPTANE ? 'C7 H16' 100.202 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 0 0 MET MET A . n A 1 2 ILE 2 1 1 ILE ILE A . n A 1 3 THR 3 2 2 THR THR A . n A 1 4 CYS 4 3 3 CYS CYS A . n A 1 5 GLY 5 4 4 GLY GLY A . n A 1 6 GLN 6 5 5 GLN GLN A . n A 1 7 VAL 7 6 6 VAL VAL A . n A 1 8 SER 8 7 7 SER SER A . n A 1 9 SER 9 8 8 SER SER A . n A 1 10 SER 10 9 9 SER SER A . n A 1 11 LEU 11 10 10 LEU LEU A . n A 1 12 ALA 12 11 11 ALA ALA A . n A 1 13 PRO 13 12 12 PRO PRO A . n A 1 14 CYS 14 13 13 CYS CYS A . n A 1 15 ILE 15 14 14 ILE ILE A . n A 1 16 PRO 16 15 15 PRO PRO A . n A 1 17 TYR 17 16 16 TYR TYR A . n A 1 18 VAL 18 17 17 VAL VAL A . n A 1 19 ARG 19 18 18 ARG ARG A . n A 1 20 GLY 20 19 19 GLY GLY A . n A 1 21 GLY 21 20 20 GLY GLY A . n A 1 22 GLY 22 21 21 GLY GLY A . n A 1 23 ALA 23 22 22 ALA ALA A . n A 1 24 VAL 24 23 23 VAL VAL A . n A 1 25 PRO 25 24 24 PRO PRO A . n A 1 26 PRO 26 25 25 PRO PRO A . n A 1 27 ALA 27 26 26 ALA ALA A . n A 1 28 CYS 28 27 27 CYS CYS A . n A 1 29 CYS 29 28 28 CYS CYS A . n A 1 30 ASN 30 29 29 ASN ASN A . n A 1 31 GLY 31 30 30 GLY GLY A . n A 1 32 ILE 32 31 31 ILE ILE A . n A 1 33 ARG 33 32 32 ARG ARG A . n A 1 34 ASN 34 33 33 ASN ASN A . n A 1 35 VAL 35 34 34 VAL VAL A . n A 1 36 ASN 36 35 35 ASN ASN A . n A 1 37 ASN 37 36 36 ASN ASN A . n A 1 38 LEU 38 37 37 LEU LEU A . n A 1 39 ALA 39 38 38 ALA ALA A . n A 1 40 ARG 40 39 39 ARG ARG A . n A 1 41 THR 41 40 40 THR THR A . n A 1 42 THR 42 41 41 THR THR A . n A 1 43 PRO 43 42 42 PRO PRO A . n A 1 44 ASP 44 43 43 ASP ASP A . n A 1 45 ARG 45 44 44 ARG ARG A . n A 1 46 GLN 46 45 45 GLN GLN A . n A 1 47 ALA 47 46 46 ALA ALA A . n A 1 48 ALA 48 47 47 ALA ALA A . n A 1 49 CYS 49 48 48 CYS CYS A . n A 1 50 ASN 50 49 49 ASN ASN A . n A 1 51 CYS 51 50 50 CYS CYS A . n A 1 52 LEU 52 51 51 LEU LEU A . n A 1 53 LYS 53 52 52 LYS LYS A . n A 1 54 GLN 54 53 53 GLN GLN A . n A 1 55 LEU 55 54 54 LEU LEU A . n A 1 56 SER 56 55 55 SER SER A . n A 1 57 ALA 57 56 56 ALA ALA A . n A 1 58 SER 58 57 57 SER SER A . n A 1 59 VAL 59 58 58 VAL VAL A . n A 1 60 PRO 60 59 59 PRO PRO A . n A 1 61 GLY 61 60 60 GLY GLY A . n A 1 62 VAL 62 61 61 VAL VAL A . n A 1 63 ASN 63 62 62 ASN ASN A . n A 1 64 PRO 64 63 63 PRO PRO A . n A 1 65 ASN 65 64 64 ASN ASN A . n A 1 66 ASN 66 65 65 ASN ASN A . n A 1 67 ALA 67 66 66 ALA ALA A . n A 1 68 ALA 68 67 67 ALA ALA A . n A 1 69 ALA 69 68 68 ALA ALA A . n A 1 70 LEU 70 69 69 LEU LEU A . n A 1 71 PRO 71 70 70 PRO PRO A . n A 1 72 GLY 72 71 71 GLY GLY A . n A 1 73 LYS 73 72 72 LYS LYS A . n A 1 74 CYS 74 73 73 CYS CYS A . n A 1 75 GLY 75 74 74 GLY GLY A . n A 1 76 VAL 76 75 75 VAL VAL A . n A 1 77 SER 77 76 76 SER SER A . n A 1 78 ILE 78 77 77 ILE ILE A . n A 1 79 PRO 79 78 78 PRO PRO A . n A 1 80 TYR 80 79 79 TYR TYR A . n A 1 81 LYS 81 80 80 LYS LYS A . n A 1 82 ILE 82 81 81 ILE ILE A . n A 1 83 SER 83 82 82 SER SER A . n A 1 84 ALA 84 83 83 ALA ALA A . n A 1 85 SER 85 84 84 SER SER A . n A 1 86 THR 86 85 85 THR THR A . n A 1 87 ASN 87 86 86 ASN ASN A . n A 1 88 CYS 88 87 87 CYS CYS A . n A 1 89 ALA 89 88 88 ALA ALA A . n A 1 90 THR 90 89 89 THR THR A . n A 1 91 VAL 91 90 90 VAL VAL A . n A 1 92 LYS 92 91 91 LYS LYS A . n B 1 1 MET 1 0 0 MET MET B . n B 1 2 ILE 2 1 1 ILE ILE B . n B 1 3 THR 3 2 2 THR THR B . n B 1 4 CYS 4 3 3 CYS CYS B . n B 1 5 GLY 5 4 4 GLY GLY B . n B 1 6 GLN 6 5 5 GLN GLN B . n B 1 7 VAL 7 6 6 VAL VAL B . n B 1 8 SER 8 7 7 SER SER B . n B 1 9 SER 9 8 8 SER SER B . n B 1 10 SER 10 9 9 SER SER B . n B 1 11 LEU 11 10 10 LEU LEU B . n B 1 12 ALA 12 11 11 ALA ALA B . n B 1 13 PRO 13 12 12 PRO PRO B . n B 1 14 CYS 14 13 13 CYS CYS B . n B 1 15 ILE 15 14 14 ILE ILE B . n B 1 16 PRO 16 15 15 PRO PRO B . n B 1 17 TYR 17 16 16 TYR TYR B . n B 1 18 VAL 18 17 17 VAL VAL B . n B 1 19 ARG 19 18 18 ARG ARG B . n B 1 20 GLY 20 19 19 GLY GLY B . n B 1 21 GLY 21 20 20 GLY GLY B . n B 1 22 GLY 22 21 21 GLY GLY B . n B 1 23 ALA 23 22 22 ALA ALA B . n B 1 24 VAL 24 23 23 VAL VAL B . n B 1 25 PRO 25 24 24 PRO PRO B . n B 1 26 PRO 26 25 25 PRO PRO B . n B 1 27 ALA 27 26 26 ALA ALA B . n B 1 28 CYS 28 27 27 CYS CYS B . n B 1 29 CYS 29 28 28 CYS CYS B . n B 1 30 ASN 30 29 29 ASN ASN B . n B 1 31 GLY 31 30 30 GLY GLY B . n B 1 32 ILE 32 31 31 ILE ILE B . n B 1 33 ARG 33 32 32 ARG ARG B . n B 1 34 ASN 34 33 33 ASN ASN B . n B 1 35 VAL 35 34 34 VAL VAL B . n B 1 36 ASN 36 35 35 ASN ASN B . n B 1 37 ASN 37 36 36 ASN ASN B . n B 1 38 LEU 38 37 37 LEU LEU B . n B 1 39 ALA 39 38 38 ALA ALA B . n B 1 40 ARG 40 39 39 ARG ARG B . n B 1 41 THR 41 40 40 THR THR B . n B 1 42 THR 42 41 41 THR THR B . n B 1 43 PRO 43 42 42 PRO PRO B . n B 1 44 ASP 44 43 43 ASP ASP B . n B 1 45 ARG 45 44 44 ARG ARG B . n B 1 46 GLN 46 45 45 GLN GLN B . n B 1 47 ALA 47 46 46 ALA ALA B . n B 1 48 ALA 48 47 47 ALA ALA B . n B 1 49 CYS 49 48 48 CYS CYS B . n B 1 50 ASN 50 49 49 ASN ASN B . n B 1 51 CYS 51 50 50 CYS CYS B . n B 1 52 LEU 52 51 51 LEU LEU B . n B 1 53 LYS 53 52 52 LYS LYS B . n B 1 54 GLN 54 53 53 GLN GLN B . n B 1 55 LEU 55 54 54 LEU LEU B . n B 1 56 SER 56 55 55 SER SER B . n B 1 57 ALA 57 56 56 ALA ALA B . n B 1 58 SER 58 57 57 SER SER B . n B 1 59 VAL 59 58 58 VAL VAL B . n B 1 60 PRO 60 59 59 PRO PRO B . n B 1 61 GLY 61 60 60 GLY GLY B . n B 1 62 VAL 62 61 61 VAL VAL B . n B 1 63 ASN 63 62 62 ASN ASN B . n B 1 64 PRO 64 63 63 PRO PRO B . n B 1 65 ASN 65 64 64 ASN ASN B . n B 1 66 ASN 66 65 65 ASN ASN B . n B 1 67 ALA 67 66 66 ALA ALA B . n B 1 68 ALA 68 67 67 ALA ALA B . n B 1 69 ALA 69 68 68 ALA ALA B . n B 1 70 LEU 70 69 69 LEU LEU B . n B 1 71 PRO 71 70 70 PRO PRO B . n B 1 72 GLY 72 71 71 GLY GLY B . n B 1 73 LYS 73 72 72 LYS LYS B . n B 1 74 CYS 74 73 73 CYS CYS B . n B 1 75 GLY 75 74 74 GLY GLY B . n B 1 76 VAL 76 75 75 VAL VAL B . n B 1 77 SER 77 76 76 SER SER B . n B 1 78 ILE 78 77 77 ILE ILE B . n B 1 79 PRO 79 78 78 PRO PRO B . n B 1 80 TYR 80 79 79 TYR TYR B . n B 1 81 LYS 81 80 80 LYS LYS B . n B 1 82 ILE 82 81 81 ILE ILE B . n B 1 83 SER 83 82 82 SER SER B . n B 1 84 ALA 84 83 83 ALA ALA B . n B 1 85 SER 85 84 84 SER SER B . n B 1 86 THR 86 85 85 THR THR B . n B 1 87 ASN 87 86 86 ASN ASN B . n B 1 88 CYS 88 87 87 CYS CYS B . n B 1 89 ALA 89 88 88 ALA ALA B . n B 1 90 THR 90 89 89 THR THR B . n B 1 91 VAL 91 90 90 VAL VAL B . n B 1 92 LYS 92 91 91 LYS LYS B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 DAO 1 202 2 DAO LAU A . D 3 HP6 1 204 1 HP6 LIG A . E 4 SO4 1 203 1 SO4 SO4 B . F 2 DAO 1 201 1 DAO LAU B . G 5 HOH 1 205 1 HOH HOH A . G 5 HOH 2 206 2 HOH HOH A . G 5 HOH 3 207 8 HOH HOH A . G 5 HOH 4 208 13 HOH HOH A . G 5 HOH 5 209 14 HOH HOH A . G 5 HOH 6 210 15 HOH HOH A . G 5 HOH 7 211 18 HOH HOH A . G 5 HOH 8 212 19 HOH HOH A . G 5 HOH 9 213 20 HOH HOH A . G 5 HOH 10 214 23 HOH HOH A . G 5 HOH 11 215 25 HOH HOH A . G 5 HOH 12 216 26 HOH HOH A . G 5 HOH 13 217 28 HOH HOH A . G 5 HOH 14 218 29 HOH HOH A . G 5 HOH 15 219 31 HOH HOH A . G 5 HOH 16 220 33 HOH HOH A . G 5 HOH 17 221 38 HOH HOH A . G 5 HOH 18 222 40 HOH HOH A . G 5 HOH 19 223 42 HOH HOH A . G 5 HOH 20 224 43 HOH HOH A . G 5 HOH 21 225 45 HOH HOH A . G 5 HOH 22 226 47 HOH HOH A . G 5 HOH 23 227 48 HOH HOH A . G 5 HOH 24 228 50 HOH HOH A . G 5 HOH 25 229 52 HOH HOH A . G 5 HOH 26 230 60 HOH HOH A . G 5 HOH 27 231 63 HOH HOH A . G 5 HOH 28 232 64 HOH HOH A . G 5 HOH 29 233 66 HOH HOH A . G 5 HOH 30 234 67 HOH HOH A . G 5 HOH 31 235 68 HOH HOH A . G 5 HOH 32 236 70 HOH HOH A . G 5 HOH 33 237 74 HOH HOH A . G 5 HOH 34 238 75 HOH HOH A . G 5 HOH 35 239 83 HOH HOH A . G 5 HOH 36 240 84 HOH HOH A . G 5 HOH 37 241 85 HOH HOH A . G 5 HOH 38 242 89 HOH HOH A . G 5 HOH 39 243 90 HOH HOH A . G 5 HOH 40 244 91 HOH HOH A . G 5 HOH 41 245 92 HOH HOH A . G 5 HOH 42 246 93 HOH HOH A . G 5 HOH 43 247 95 HOH HOH A . G 5 HOH 44 248 96 HOH HOH A . G 5 HOH 45 249 98 HOH HOH A . G 5 HOH 46 250 104 HOH HOH A . G 5 HOH 47 251 105 HOH HOH A . G 5 HOH 48 252 106 HOH HOH A . G 5 HOH 49 253 108 HOH HOH A . G 5 HOH 50 254 112 HOH HOH A . G 5 HOH 51 255 116 HOH HOH A . G 5 HOH 52 256 117 HOH HOH A . G 5 HOH 53 257 119 HOH HOH A . G 5 HOH 54 258 120 HOH HOH A . G 5 HOH 55 259 122 HOH HOH A . G 5 HOH 56 260 123 HOH HOH A . G 5 HOH 57 261 125 HOH HOH A . G 5 HOH 58 262 126 HOH HOH A . G 5 HOH 59 263 131 HOH HOH A . G 5 HOH 60 264 132 HOH HOH A . G 5 HOH 61 265 135 HOH HOH A . G 5 HOH 62 266 137 HOH HOH A . G 5 HOH 63 267 138 HOH HOH A . G 5 HOH 64 268 139 HOH HOH A . G 5 HOH 65 269 140 HOH HOH A . G 5 HOH 66 270 142 HOH HOH A . G 5 HOH 67 271 143 HOH HOH A . G 5 HOH 68 272 145 HOH HOH A . G 5 HOH 69 273 147 HOH HOH A . H 5 HOH 1 204 3 HOH HOH B . H 5 HOH 2 205 4 HOH HOH B . H 5 HOH 3 206 5 HOH HOH B . H 5 HOH 4 207 6 HOH HOH B . H 5 HOH 5 208 7 HOH HOH B . H 5 HOH 6 209 9 HOH HOH B . H 5 HOH 7 210 10 HOH HOH B . H 5 HOH 8 211 11 HOH HOH B . H 5 HOH 9 212 12 HOH HOH B . H 5 HOH 10 213 16 HOH HOH B . H 5 HOH 11 214 17 HOH HOH B . H 5 HOH 12 215 21 HOH HOH B . H 5 HOH 13 216 22 HOH HOH B . H 5 HOH 14 217 24 HOH HOH B . H 5 HOH 15 218 27 HOH HOH B . H 5 HOH 16 219 30 HOH HOH B . H 5 HOH 17 220 32 HOH HOH B . H 5 HOH 18 221 34 HOH HOH B . H 5 HOH 19 222 35 HOH HOH B . H 5 HOH 20 223 36 HOH HOH B . H 5 HOH 21 224 37 HOH HOH B . H 5 HOH 22 225 39 HOH HOH B . H 5 HOH 23 226 41 HOH HOH B . H 5 HOH 24 227 44 HOH HOH B . H 5 HOH 25 228 46 HOH HOH B . H 5 HOH 26 229 49 HOH HOH B . H 5 HOH 27 230 51 HOH HOH B . H 5 HOH 28 231 53 HOH HOH B . H 5 HOH 29 232 54 HOH HOH B . H 5 HOH 30 233 55 HOH HOH B . H 5 HOH 31 234 56 HOH HOH B . H 5 HOH 32 235 57 HOH HOH B . H 5 HOH 33 236 58 HOH HOH B . H 5 HOH 34 237 59 HOH HOH B . H 5 HOH 35 238 61 HOH HOH B . H 5 HOH 36 239 62 HOH HOH B . H 5 HOH 37 240 65 HOH HOH B . H 5 HOH 38 241 69 HOH HOH B . H 5 HOH 39 242 71 HOH HOH B . H 5 HOH 40 243 72 HOH HOH B . H 5 HOH 41 244 73 HOH HOH B . H 5 HOH 42 245 76 HOH HOH B . H 5 HOH 43 246 77 HOH HOH B . H 5 HOH 44 247 78 HOH HOH B . H 5 HOH 45 248 79 HOH HOH B . H 5 HOH 46 249 80 HOH HOH B . H 5 HOH 47 250 81 HOH HOH B . H 5 HOH 48 251 86 HOH HOH B . H 5 HOH 49 252 87 HOH HOH B . H 5 HOH 50 253 88 HOH HOH B . H 5 HOH 51 254 94 HOH HOH B . H 5 HOH 52 255 97 HOH HOH B . H 5 HOH 53 256 99 HOH HOH B . H 5 HOH 54 257 100 HOH HOH B . H 5 HOH 55 258 101 HOH HOH B . H 5 HOH 56 259 102 HOH HOH B . H 5 HOH 57 260 103 HOH HOH B . H 5 HOH 58 261 107 HOH HOH B . H 5 HOH 59 262 109 HOH HOH B . H 5 HOH 60 263 110 HOH HOH B . H 5 HOH 61 264 111 HOH HOH B . H 5 HOH 62 265 113 HOH HOH B . H 5 HOH 63 266 114 HOH HOH B . H 5 HOH 64 267 115 HOH HOH B . H 5 HOH 65 268 118 HOH HOH B . H 5 HOH 66 269 121 HOH HOH B . H 5 HOH 67 270 124 HOH HOH B . H 5 HOH 68 271 127 HOH HOH B . H 5 HOH 69 272 128 HOH HOH B . H 5 HOH 70 273 129 HOH HOH B . H 5 HOH 71 274 130 HOH HOH B . H 5 HOH 72 275 133 HOH HOH B . H 5 HOH 73 276 134 HOH HOH B . H 5 HOH 74 277 136 HOH HOH B . H 5 HOH 75 278 141 HOH HOH B . H 5 HOH 76 279 144 HOH HOH B . H 5 HOH 77 280 146 HOH HOH B . H 5 HOH 78 281 148 HOH HOH B . H 5 HOH 79 282 149 HOH HOH B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.1 ? 1 HKL-2000 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 PHASER phasing . ? 4 # _cell.entry_id 2B5S _cell.length_a 102.352 _cell.length_b 102.352 _cell.length_c 74.236 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2B5S _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? # _exptl.entry_id 2B5S _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.9 _exptl_crystal.density_percent_sol 57 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.pdbx_details 'ammonium sulphate 2.3 M, Sodium acetate 0.1 M, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type SBC-2 _diffrn_detector.pdbx_collection_date 2004-10-22 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.957 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.957 # _reflns.entry_id 2B5S _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 44.32 _reflns.d_resolution_high 2.35 _reflns.number_obs 10082 _reflns.number_all ? _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.077 _reflns.pdbx_Rsym_value 0.077 _reflns.pdbx_netI_over_sigmaI 37.8 _reflns.B_iso_Wilson_estimate 38.1 _reflns.pdbx_redundancy 11.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.35 _reflns_shell.d_res_low 2.43 _reflns_shell.percent_possible_all 99.5 _reflns_shell.Rmerge_I_obs 0.66 _reflns_shell.pdbx_Rsym_value 0.66 _reflns_shell.meanI_over_sigI_obs 4.1 _reflns_shell.pdbx_redundancy 11.0 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 976 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2B5S _refine.ls_number_reflns_obs 10001 _refine.ls_number_reflns_all 10019 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 1741035.68 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 44.32 _refine.ls_d_res_high 2.35 _refine.ls_percent_reflns_obs 99.9 _refine.ls_R_factor_obs 0.216 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.216 _refine.ls_R_factor_R_free 0.263 _refine.ls_R_factor_R_free_error 0.010 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 7.3 _refine.ls_number_reflns_R_free 728 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 49.4 _refine.aniso_B[1][1] -3.89 _refine.aniso_B[2][2] -3.89 _refine.aniso_B[3][3] 7.78 _refine.aniso_B[1][2] 1.05 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.350052 _refine.solvent_model_param_bsol 67.5397 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'pdb entry 2ALG' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2B5S _refine_analyze.Luzzati_coordinate_error_obs 0.28 _refine_analyze.Luzzati_sigma_a_obs 0.18 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.34 _refine_analyze.Luzzati_sigma_a_free 0.21 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1284 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 40 _refine_hist.number_atoms_solvent 148 _refine_hist.number_atoms_total 1472 _refine_hist.d_res_high 2.35 _refine_hist.d_res_low 44.32 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.009 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.4 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 21.5 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.94 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.35 _refine_ls_shell.d_res_low 2.50 _refine_ls_shell.number_reflns_R_work 1509 _refine_ls_shell.R_factor_R_work 0.229 _refine_ls_shell.percent_reflns_obs 99.3 _refine_ls_shell.R_factor_R_free 0.272 _refine_ls_shell.R_factor_R_free_error 0.026 _refine_ls_shell.percent_reflns_R_free 6.8 _refine_ls_shell.number_reflns_R_free 110 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 water_rep.param water_rep.top 'X-RAY DIFFRACTION' 3 ligand_tot.param ligand_tot.top 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 2B5S _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2B5S _struct.title 'Crystal structure of peach Pru p3, the prototypic member of the family of plant non-specific lipid transfer protein pan-allergens' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2B5S _struct_keywords.pdbx_keywords 'LIPID TRANSPORT' _struct_keywords.text 'non-specific lipid transfer protein, ns-ltp, food allergen, LIPID TRANSPORT' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 2 ? G N N 5 ? H N N 5 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code NLTP1_PRUPE _struct_ref.pdbx_db_accession P81402 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ITCGQVSSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVSIPYK ISASTNCATVK ; _struct_ref.pdbx_align_begin 27 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2B5S A 2 ? 92 ? P81402 27 ? 117 ? 1 91 2 1 2B5S B 2 ? 92 ? P81402 27 ? 117 ? 1 91 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2B5S MET A 1 ? UNP P81402 ? ? 'initiating methionine' 0 1 2 2B5S MET B 1 ? UNP P81402 ? ? 'initiating methionine' 0 2 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_defined_assembly ? monomeric 1 3 software_defined_assembly PISA tetrameric 4 4 software_defined_assembly PISA dimeric 2 5 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 3 'ABSA (A^2)' 8020 ? 3 MORE -42 ? 3 'SSA (A^2)' 15130 ? 4 'ABSA (A^2)' 2910 ? 4 MORE -14 ? 4 'SSA (A^2)' 8660 ? 5 'ABSA (A^2)' 1040 ? 5 MORE -28 ? 5 'SSA (A^2)' 9270 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,G 2 1 B,E,F,H 3 1,2 A,C,D,G 3 3,4 B,E,F,H 4 1 A,C,D,G 4 4 B,E,F,H 5 1,5 B,E,F,H # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 11_554 -x+y,y,-z-1/2 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 -37.1180000000 3 'crystal symmetry operation' 5_555 y,-x+y,z+1/6 0.5000000000 0.8660254038 0.0000000000 0.0000000000 -0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 12.3726666667 4 'crystal symmetry operation' 9_554 -x,-x+y,-z-2/3 -0.5000000000 -0.8660254038 0.0000000000 0.0000000000 -0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 -49.4906666667 5 'crystal symmetry operation' 10_554 -y,-x,-z-5/6 0.5000000000 -0.8660254038 0.0000000000 0.0000000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 -61.8633333333 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 3 ? ALA A 12 ? THR A 2 ALA A 11 1 ? 10 HELX_P HELX_P2 2 CYS A 14 ? GLY A 21 ? CYS A 13 GLY A 20 1 ? 8 HELX_P HELX_P3 3 PRO A 25 ? ALA A 39 ? PRO A 24 ALA A 38 1 ? 15 HELX_P HELX_P4 4 THR A 41 ? VAL A 59 ? THR A 40 VAL A 58 1 ? 19 HELX_P HELX_P5 5 ASN A 63 ? CYS A 74 ? ASN A 62 CYS A 73 1 ? 12 HELX_P HELX_P6 6 ASN A 87 ? VAL A 91 ? ASN A 86 VAL A 90 5 ? 5 HELX_P HELX_P7 7 THR B 3 ? ALA B 12 ? THR B 2 ALA B 11 1 ? 10 HELX_P HELX_P8 8 CYS B 14 ? GLY B 21 ? CYS B 13 GLY B 20 1 ? 8 HELX_P HELX_P9 9 PRO B 25 ? LEU B 38 ? PRO B 24 LEU B 37 1 ? 14 HELX_P HELX_P10 10 THR B 41 ? VAL B 59 ? THR B 40 VAL B 58 1 ? 19 HELX_P HELX_P11 11 ASN B 63 ? GLY B 75 ? ASN B 62 GLY B 74 1 ? 13 HELX_P HELX_P12 12 ASN B 87 ? VAL B 91 ? ASN B 86 VAL B 90 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 4 SG ? ? ? 1_555 A CYS 51 SG ? ? A CYS 3 A CYS 50 1_555 ? ? ? ? ? ? ? 2.038 ? ? disulf2 disulf ? ? A CYS 14 SG ? ? ? 1_555 A CYS 28 SG ? ? A CYS 13 A CYS 27 1_555 ? ? ? ? ? ? ? 2.053 ? ? disulf3 disulf ? ? A CYS 29 SG ? ? ? 1_555 A CYS 74 SG ? ? A CYS 28 A CYS 73 1_555 ? ? ? ? ? ? ? 2.037 ? ? disulf4 disulf ? ? A CYS 49 SG ? ? ? 1_555 A CYS 88 SG ? ? A CYS 48 A CYS 87 1_555 ? ? ? ? ? ? ? 2.036 ? ? disulf5 disulf ? ? B CYS 4 SG ? ? ? 1_555 B CYS 51 SG ? ? B CYS 3 B CYS 50 1_555 ? ? ? ? ? ? ? 2.035 ? ? disulf6 disulf ? ? B CYS 14 SG ? ? ? 1_555 B CYS 28 SG ? ? B CYS 13 B CYS 27 1_555 ? ? ? ? ? ? ? 2.046 ? ? disulf7 disulf ? ? B CYS 29 SG ? ? ? 1_555 B CYS 74 SG ? ? B CYS 28 B CYS 73 1_555 ? ? ? ? ? ? ? 2.037 ? ? disulf8 disulf ? ? B CYS 49 SG ? ? ? 1_555 B CYS 88 SG ? ? B CYS 48 B CYS 87 1_555 ? ? ? ? ? ? ? 2.035 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 CYS A 4 ? CYS A 51 ? CYS A 3 ? 1_555 CYS A 50 ? 1_555 SG SG . . . None 'Disulfide bridge' 2 CYS A 14 ? CYS A 28 ? CYS A 13 ? 1_555 CYS A 27 ? 1_555 SG SG . . . None 'Disulfide bridge' 3 CYS A 29 ? CYS A 74 ? CYS A 28 ? 1_555 CYS A 73 ? 1_555 SG SG . . . None 'Disulfide bridge' 4 CYS A 49 ? CYS A 88 ? CYS A 48 ? 1_555 CYS A 87 ? 1_555 SG SG . . . None 'Disulfide bridge' 5 CYS B 4 ? CYS B 51 ? CYS B 3 ? 1_555 CYS B 50 ? 1_555 SG SG . . . None 'Disulfide bridge' 6 CYS B 14 ? CYS B 28 ? CYS B 13 ? 1_555 CYS B 27 ? 1_555 SG SG . . . None 'Disulfide bridge' 7 CYS B 29 ? CYS B 74 ? CYS B 28 ? 1_555 CYS B 73 ? 1_555 SG SG . . . None 'Disulfide bridge' 8 CYS B 49 ? CYS B 88 ? CYS B 48 ? 1_555 CYS B 87 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B SO4 203 ? 6 'BINDING SITE FOR RESIDUE SO4 B 203' AC2 Software B DAO 201 ? 6 'BINDING SITE FOR RESIDUE DAO B 201' AC3 Software A DAO 202 ? 9 'BINDING SITE FOR RESIDUE DAO A 202' AC4 Software A HP6 204 ? 3 'BINDING SITE FOR RESIDUE HP6 A 204' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 ALA A 27 ? ALA A 26 . ? 9_554 ? 2 AC1 6 ASN A 30 ? ASN A 29 . ? 9_554 ? 3 AC1 6 HOH G . ? HOH A 226 . ? 9_554 ? 4 AC1 6 THR B 3 ? THR B 2 . ? 1_555 ? 5 AC1 6 GLY B 5 ? GLY B 4 . ? 1_555 ? 6 AC1 6 HOH H . ? HOH B 250 . ? 1_555 ? 7 AC2 6 SER A 9 ? SER A 8 . ? 9_554 ? 8 AC2 6 SER B 8 ? SER B 7 . ? 1_555 ? 9 AC2 6 LEU B 11 ? LEU B 10 . ? 1_555 ? 10 AC2 6 VAL B 18 ? VAL B 17 . ? 1_555 ? 11 AC2 6 ARG B 19 ? ARG B 18 . ? 10_554 ? 12 AC2 6 HOH H . ? HOH B 247 . ? 1_555 ? 13 AC3 9 ARG A 45 ? ARG A 44 . ? 1_555 ? 14 AC3 9 ALA A 48 ? ALA A 47 . ? 1_555 ? 15 AC3 9 CYS A 49 ? CYS A 48 . ? 1_555 ? 16 AC3 9 LYS A 53 ? LYS A 52 . ? 1_555 ? 17 AC3 9 SER A 56 ? SER A 55 . ? 1_555 ? 18 AC3 9 LYS A 81 ? LYS A 80 . ? 1_555 ? 19 AC3 9 ILE A 82 ? ILE A 81 . ? 1_555 ? 20 AC3 9 SER A 83 ? SER A 82 . ? 1_555 ? 21 AC3 9 HP6 D . ? HP6 A 204 . ? 1_555 ? 22 AC4 3 ILE A 32 ? ILE A 31 . ? 1_555 ? 23 AC4 3 ILE A 78 ? ILE A 77 . ? 1_555 ? 24 AC4 3 DAO C . ? DAO A 202 . ? 1_555 ? # _pdbx_entry_details.entry_id 2B5S _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 C _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ILE _pdbx_validate_rmsd_angle.auth_seq_id_1 77 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 N _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 PRO _pdbx_validate_rmsd_angle.auth_seq_id_2 78 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CA _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 PRO _pdbx_validate_rmsd_angle.auth_seq_id_3 78 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 128.60 _pdbx_validate_rmsd_angle.angle_target_value 119.30 _pdbx_validate_rmsd_angle.angle_deviation 9.30 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.50 _pdbx_validate_rmsd_angle.linker_flag Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 78 ? ? -54.07 3.62 2 1 ILE B 1 ? ? -175.82 92.69 3 1 ASN B 86 ? ? -66.50 97.21 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id B _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 249 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id H _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DAO O1 O N N 88 DAO O2 O N N 89 DAO C1 C N N 90 DAO C2 C N N 91 DAO C3 C N N 92 DAO C4 C N N 93 DAO C5 C N N 94 DAO C6 C N N 95 DAO C7 C N N 96 DAO C8 C N N 97 DAO C9 C N N 98 DAO C10 C N N 99 DAO C11 C N N 100 DAO C12 C N N 101 DAO HO2 H N N 102 DAO H21 H N N 103 DAO H22 H N N 104 DAO H31 H N N 105 DAO H32 H N N 106 DAO H41 H N N 107 DAO H42 H N N 108 DAO H51 H N N 109 DAO H52 H N N 110 DAO H61 H N N 111 DAO H62 H N N 112 DAO H71 H N N 113 DAO H72 H N N 114 DAO H81 H N N 115 DAO H82 H N N 116 DAO H91 H N N 117 DAO H92 H N N 118 DAO H101 H N N 119 DAO H102 H N N 120 DAO H111 H N N 121 DAO H112 H N N 122 DAO H121 H N N 123 DAO H122 H N N 124 DAO H123 H N N 125 GLN N N N N 126 GLN CA C N S 127 GLN C C N N 128 GLN O O N N 129 GLN CB C N N 130 GLN CG C N N 131 GLN CD C N N 132 GLN OE1 O N N 133 GLN NE2 N N N 134 GLN OXT O N N 135 GLN H H N N 136 GLN H2 H N N 137 GLN HA H N N 138 GLN HB2 H N N 139 GLN HB3 H N N 140 GLN HG2 H N N 141 GLN HG3 H N N 142 GLN HE21 H N N 143 GLN HE22 H N N 144 GLN HXT H N N 145 GLY N N N N 146 GLY CA C N N 147 GLY C C N N 148 GLY O O N N 149 GLY OXT O N N 150 GLY H H N N 151 GLY H2 H N N 152 GLY HA2 H N N 153 GLY HA3 H N N 154 GLY HXT H N N 155 HOH O O N N 156 HOH H1 H N N 157 HOH H2 H N N 158 HP6 C20 C N N 159 HP6 C21 C N N 160 HP6 C22 C N N 161 HP6 C23 C N N 162 HP6 C24 C N N 163 HP6 C25 C N N 164 HP6 C26 C N N 165 HP6 H201 H N N 166 HP6 H202 H N N 167 HP6 H203 H N N 168 HP6 H211 H N N 169 HP6 H212 H N N 170 HP6 H221 H N N 171 HP6 H222 H N N 172 HP6 H231 H N N 173 HP6 H232 H N N 174 HP6 H241 H N N 175 HP6 H242 H N N 176 HP6 H251 H N N 177 HP6 H252 H N N 178 HP6 H261 H N N 179 HP6 H262 H N N 180 HP6 H263 H N N 181 ILE N N N N 182 ILE CA C N S 183 ILE C C N N 184 ILE O O N N 185 ILE CB C N S 186 ILE CG1 C N N 187 ILE CG2 C N N 188 ILE CD1 C N N 189 ILE OXT O N N 190 ILE H H N N 191 ILE H2 H N N 192 ILE HA H N N 193 ILE HB H N N 194 ILE HG12 H N N 195 ILE HG13 H N N 196 ILE HG21 H N N 197 ILE HG22 H N N 198 ILE HG23 H N N 199 ILE HD11 H N N 200 ILE HD12 H N N 201 ILE HD13 H N N 202 ILE HXT H N N 203 LEU N N N N 204 LEU CA C N S 205 LEU C C N N 206 LEU O O N N 207 LEU CB C N N 208 LEU CG C N N 209 LEU CD1 C N N 210 LEU CD2 C N N 211 LEU OXT O N N 212 LEU H H N N 213 LEU H2 H N N 214 LEU HA H N N 215 LEU HB2 H N N 216 LEU HB3 H N N 217 LEU HG H N N 218 LEU HD11 H N N 219 LEU HD12 H N N 220 LEU HD13 H N N 221 LEU HD21 H N N 222 LEU HD22 H N N 223 LEU HD23 H N N 224 LEU HXT H N N 225 LYS N N N N 226 LYS CA C N S 227 LYS C C N N 228 LYS O O N N 229 LYS CB C N N 230 LYS CG C N N 231 LYS CD C N N 232 LYS CE C N N 233 LYS NZ N N N 234 LYS OXT O N N 235 LYS H H N N 236 LYS H2 H N N 237 LYS HA H N N 238 LYS HB2 H N N 239 LYS HB3 H N N 240 LYS HG2 H N N 241 LYS HG3 H N N 242 LYS HD2 H N N 243 LYS HD3 H N N 244 LYS HE2 H N N 245 LYS HE3 H N N 246 LYS HZ1 H N N 247 LYS HZ2 H N N 248 LYS HZ3 H N N 249 LYS HXT H N N 250 MET N N N N 251 MET CA C N S 252 MET C C N N 253 MET O O N N 254 MET CB C N N 255 MET CG C N N 256 MET SD S N N 257 MET CE C N N 258 MET OXT O N N 259 MET H H N N 260 MET H2 H N N 261 MET HA H N N 262 MET HB2 H N N 263 MET HB3 H N N 264 MET HG2 H N N 265 MET HG3 H N N 266 MET HE1 H N N 267 MET HE2 H N N 268 MET HE3 H N N 269 MET HXT H N N 270 PRO N N N N 271 PRO CA C N S 272 PRO C C N N 273 PRO O O N N 274 PRO CB C N N 275 PRO CG C N N 276 PRO CD C N N 277 PRO OXT O N N 278 PRO H H N N 279 PRO HA H N N 280 PRO HB2 H N N 281 PRO HB3 H N N 282 PRO HG2 H N N 283 PRO HG3 H N N 284 PRO HD2 H N N 285 PRO HD3 H N N 286 PRO HXT H N N 287 SER N N N N 288 SER CA C N S 289 SER C C N N 290 SER O O N N 291 SER CB C N N 292 SER OG O N N 293 SER OXT O N N 294 SER H H N N 295 SER H2 H N N 296 SER HA H N N 297 SER HB2 H N N 298 SER HB3 H N N 299 SER HG H N N 300 SER HXT H N N 301 SO4 S S N N 302 SO4 O1 O N N 303 SO4 O2 O N N 304 SO4 O3 O N N 305 SO4 O4 O N N 306 THR N N N N 307 THR CA C N S 308 THR C C N N 309 THR O O N N 310 THR CB C N R 311 THR OG1 O N N 312 THR CG2 C N N 313 THR OXT O N N 314 THR H H N N 315 THR H2 H N N 316 THR HA H N N 317 THR HB H N N 318 THR HG1 H N N 319 THR HG21 H N N 320 THR HG22 H N N 321 THR HG23 H N N 322 THR HXT H N N 323 TYR N N N N 324 TYR CA C N S 325 TYR C C N N 326 TYR O O N N 327 TYR CB C N N 328 TYR CG C Y N 329 TYR CD1 C Y N 330 TYR CD2 C Y N 331 TYR CE1 C Y N 332 TYR CE2 C Y N 333 TYR CZ C Y N 334 TYR OH O N N 335 TYR OXT O N N 336 TYR H H N N 337 TYR H2 H N N 338 TYR HA H N N 339 TYR HB2 H N N 340 TYR HB3 H N N 341 TYR HD1 H N N 342 TYR HD2 H N N 343 TYR HE1 H N N 344 TYR HE2 H N N 345 TYR HH H N N 346 TYR HXT H N N 347 VAL N N N N 348 VAL CA C N S 349 VAL C C N N 350 VAL O O N N 351 VAL CB C N N 352 VAL CG1 C N N 353 VAL CG2 C N N 354 VAL OXT O N N 355 VAL H H N N 356 VAL H2 H N N 357 VAL HA H N N 358 VAL HB H N N 359 VAL HG11 H N N 360 VAL HG12 H N N 361 VAL HG13 H N N 362 VAL HG21 H N N 363 VAL HG22 H N N 364 VAL HG23 H N N 365 VAL HXT H N N 366 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DAO O1 C1 doub N N 83 DAO O2 C1 sing N N 84 DAO O2 HO2 sing N N 85 DAO C1 C2 sing N N 86 DAO C2 C3 sing N N 87 DAO C2 H21 sing N N 88 DAO C2 H22 sing N N 89 DAO C3 C4 sing N N 90 DAO C3 H31 sing N N 91 DAO C3 H32 sing N N 92 DAO C4 C5 sing N N 93 DAO C4 H41 sing N N 94 DAO C4 H42 sing N N 95 DAO C5 C6 sing N N 96 DAO C5 H51 sing N N 97 DAO C5 H52 sing N N 98 DAO C6 C7 sing N N 99 DAO C6 H61 sing N N 100 DAO C6 H62 sing N N 101 DAO C7 C8 sing N N 102 DAO C7 H71 sing N N 103 DAO C7 H72 sing N N 104 DAO C8 C9 sing N N 105 DAO C8 H81 sing N N 106 DAO C8 H82 sing N N 107 DAO C9 C10 sing N N 108 DAO C9 H91 sing N N 109 DAO C9 H92 sing N N 110 DAO C10 C11 sing N N 111 DAO C10 H101 sing N N 112 DAO C10 H102 sing N N 113 DAO C11 C12 sing N N 114 DAO C11 H111 sing N N 115 DAO C11 H112 sing N N 116 DAO C12 H121 sing N N 117 DAO C12 H122 sing N N 118 DAO C12 H123 sing N N 119 GLN N CA sing N N 120 GLN N H sing N N 121 GLN N H2 sing N N 122 GLN CA C sing N N 123 GLN CA CB sing N N 124 GLN CA HA sing N N 125 GLN C O doub N N 126 GLN C OXT sing N N 127 GLN CB CG sing N N 128 GLN CB HB2 sing N N 129 GLN CB HB3 sing N N 130 GLN CG CD sing N N 131 GLN CG HG2 sing N N 132 GLN CG HG3 sing N N 133 GLN CD OE1 doub N N 134 GLN CD NE2 sing N N 135 GLN NE2 HE21 sing N N 136 GLN NE2 HE22 sing N N 137 GLN OXT HXT sing N N 138 GLY N CA sing N N 139 GLY N H sing N N 140 GLY N H2 sing N N 141 GLY CA C sing N N 142 GLY CA HA2 sing N N 143 GLY CA HA3 sing N N 144 GLY C O doub N N 145 GLY C OXT sing N N 146 GLY OXT HXT sing N N 147 HOH O H1 sing N N 148 HOH O H2 sing N N 149 HP6 C20 C21 sing N N 150 HP6 C20 H201 sing N N 151 HP6 C20 H202 sing N N 152 HP6 C20 H203 sing N N 153 HP6 C21 C22 sing N N 154 HP6 C21 H211 sing N N 155 HP6 C21 H212 sing N N 156 HP6 C22 C23 sing N N 157 HP6 C22 H221 sing N N 158 HP6 C22 H222 sing N N 159 HP6 C23 C24 sing N N 160 HP6 C23 H231 sing N N 161 HP6 C23 H232 sing N N 162 HP6 C24 C25 sing N N 163 HP6 C24 H241 sing N N 164 HP6 C24 H242 sing N N 165 HP6 C25 C26 sing N N 166 HP6 C25 H251 sing N N 167 HP6 C25 H252 sing N N 168 HP6 C26 H261 sing N N 169 HP6 C26 H262 sing N N 170 HP6 C26 H263 sing N N 171 ILE N CA sing N N 172 ILE N H sing N N 173 ILE N H2 sing N N 174 ILE CA C sing N N 175 ILE CA CB sing N N 176 ILE CA HA sing N N 177 ILE C O doub N N 178 ILE C OXT sing N N 179 ILE CB CG1 sing N N 180 ILE CB CG2 sing N N 181 ILE CB HB sing N N 182 ILE CG1 CD1 sing N N 183 ILE CG1 HG12 sing N N 184 ILE CG1 HG13 sing N N 185 ILE CG2 HG21 sing N N 186 ILE CG2 HG22 sing N N 187 ILE CG2 HG23 sing N N 188 ILE CD1 HD11 sing N N 189 ILE CD1 HD12 sing N N 190 ILE CD1 HD13 sing N N 191 ILE OXT HXT sing N N 192 LEU N CA sing N N 193 LEU N H sing N N 194 LEU N H2 sing N N 195 LEU CA C sing N N 196 LEU CA CB sing N N 197 LEU CA HA sing N N 198 LEU C O doub N N 199 LEU C OXT sing N N 200 LEU CB CG sing N N 201 LEU CB HB2 sing N N 202 LEU CB HB3 sing N N 203 LEU CG CD1 sing N N 204 LEU CG CD2 sing N N 205 LEU CG HG sing N N 206 LEU CD1 HD11 sing N N 207 LEU CD1 HD12 sing N N 208 LEU CD1 HD13 sing N N 209 LEU CD2 HD21 sing N N 210 LEU CD2 HD22 sing N N 211 LEU CD2 HD23 sing N N 212 LEU OXT HXT sing N N 213 LYS N CA sing N N 214 LYS N H sing N N 215 LYS N H2 sing N N 216 LYS CA C sing N N 217 LYS CA CB sing N N 218 LYS CA HA sing N N 219 LYS C O doub N N 220 LYS C OXT sing N N 221 LYS CB CG sing N N 222 LYS CB HB2 sing N N 223 LYS CB HB3 sing N N 224 LYS CG CD sing N N 225 LYS CG HG2 sing N N 226 LYS CG HG3 sing N N 227 LYS CD CE sing N N 228 LYS CD HD2 sing N N 229 LYS CD HD3 sing N N 230 LYS CE NZ sing N N 231 LYS CE HE2 sing N N 232 LYS CE HE3 sing N N 233 LYS NZ HZ1 sing N N 234 LYS NZ HZ2 sing N N 235 LYS NZ HZ3 sing N N 236 LYS OXT HXT sing N N 237 MET N CA sing N N 238 MET N H sing N N 239 MET N H2 sing N N 240 MET CA C sing N N 241 MET CA CB sing N N 242 MET CA HA sing N N 243 MET C O doub N N 244 MET C OXT sing N N 245 MET CB CG sing N N 246 MET CB HB2 sing N N 247 MET CB HB3 sing N N 248 MET CG SD sing N N 249 MET CG HG2 sing N N 250 MET CG HG3 sing N N 251 MET SD CE sing N N 252 MET CE HE1 sing N N 253 MET CE HE2 sing N N 254 MET CE HE3 sing N N 255 MET OXT HXT sing N N 256 PRO N CA sing N N 257 PRO N CD sing N N 258 PRO N H sing N N 259 PRO CA C sing N N 260 PRO CA CB sing N N 261 PRO CA HA sing N N 262 PRO C O doub N N 263 PRO C OXT sing N N 264 PRO CB CG sing N N 265 PRO CB HB2 sing N N 266 PRO CB HB3 sing N N 267 PRO CG CD sing N N 268 PRO CG HG2 sing N N 269 PRO CG HG3 sing N N 270 PRO CD HD2 sing N N 271 PRO CD HD3 sing N N 272 PRO OXT HXT sing N N 273 SER N CA sing N N 274 SER N H sing N N 275 SER N H2 sing N N 276 SER CA C sing N N 277 SER CA CB sing N N 278 SER CA HA sing N N 279 SER C O doub N N 280 SER C OXT sing N N 281 SER CB OG sing N N 282 SER CB HB2 sing N N 283 SER CB HB3 sing N N 284 SER OG HG sing N N 285 SER OXT HXT sing N N 286 SO4 S O1 doub N N 287 SO4 S O2 doub N N 288 SO4 S O3 sing N N 289 SO4 S O4 sing N N 290 THR N CA sing N N 291 THR N H sing N N 292 THR N H2 sing N N 293 THR CA C sing N N 294 THR CA CB sing N N 295 THR CA HA sing N N 296 THR C O doub N N 297 THR C OXT sing N N 298 THR CB OG1 sing N N 299 THR CB CG2 sing N N 300 THR CB HB sing N N 301 THR OG1 HG1 sing N N 302 THR CG2 HG21 sing N N 303 THR CG2 HG22 sing N N 304 THR CG2 HG23 sing N N 305 THR OXT HXT sing N N 306 TYR N CA sing N N 307 TYR N H sing N N 308 TYR N H2 sing N N 309 TYR CA C sing N N 310 TYR CA CB sing N N 311 TYR CA HA sing N N 312 TYR C O doub N N 313 TYR C OXT sing N N 314 TYR CB CG sing N N 315 TYR CB HB2 sing N N 316 TYR CB HB3 sing N N 317 TYR CG CD1 doub Y N 318 TYR CG CD2 sing Y N 319 TYR CD1 CE1 sing Y N 320 TYR CD1 HD1 sing N N 321 TYR CD2 CE2 doub Y N 322 TYR CD2 HD2 sing N N 323 TYR CE1 CZ doub Y N 324 TYR CE1 HE1 sing N N 325 TYR CE2 CZ sing Y N 326 TYR CE2 HE2 sing N N 327 TYR CZ OH sing N N 328 TYR OH HH sing N N 329 TYR OXT HXT sing N N 330 VAL N CA sing N N 331 VAL N H sing N N 332 VAL N H2 sing N N 333 VAL CA C sing N N 334 VAL CA CB sing N N 335 VAL CA HA sing N N 336 VAL C O doub N N 337 VAL C OXT sing N N 338 VAL CB CG1 sing N N 339 VAL CB CG2 sing N N 340 VAL CB HB sing N N 341 VAL CG1 HG11 sing N N 342 VAL CG1 HG12 sing N N 343 VAL CG1 HG13 sing N N 344 VAL CG2 HG21 sing N N 345 VAL CG2 HG22 sing N N 346 VAL CG2 HG23 sing N N 347 VAL OXT HXT sing N N 348 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2ALG _pdbx_initial_refinement_model.details 'pdb entry 2ALG' # _atom_sites.entry_id 2B5S _atom_sites.fract_transf_matrix[1][1] 0.009770 _atom_sites.fract_transf_matrix[1][2] 0.005641 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011282 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013471 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_