HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 30-SEP-05 2B6C TITLE PREDICTED DNA ALKYLATION REPAIR ENZYME FROM ENTEROCOCCUS FAECALIS. COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN EF3068; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROCOCCUS FAECALIS; SOURCE 3 ORGANISM_TAXID: 1351; SOURCE 4 GENE: EF3068; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS STRUCTURAL GENOMIS, DNA REPAIR ENZYME, STRUCTURAL GENOMICS, PSI, KEYWDS 2 PROTEIN STRUCTURE INITIATIVE, MIDWEST CENTER FOR STRUCTURAL KEYWDS 3 GENOMICS, MCSG, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR J.OSIPIUK,C.HATZOS,S.MOY,F.COLLART,A.JOACHIMIAK,MIDWEST CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS (MCSG) REVDAT 3 13-JUL-11 2B6C 1 VERSN REVDAT 2 24-FEB-09 2B6C 1 VERSN REVDAT 1 15-NOV-05 2B6C 0 JRNL AUTH J.OSIPIUK,C.HATZOS,S.MOY,F.COLLART,A.JOACHIMIAK JRNL TITL XRAY STRUCTURE OF PREDICTED DNA ALKYLATION REPAIR ENZYME JRNL TITL 2 FROM ENTEROCOCCUS FAECALIS. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 3 NUMBER OF REFLECTIONS : 36285 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.160 REMARK 3 R VALUE (WORKING SET) : 0.158 REMARK 3 FREE R VALUE : 0.202 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 3603 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.16 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1995 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 73.05 REMARK 3 BIN R VALUE (WORKING SET) : 0.2040 REMARK 3 BIN FREE R VALUE SET COUNT : 193 REMARK 3 BIN FREE R VALUE : 0.2700 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3576 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 58 REMARK 3 SOLVENT ATOMS : 305 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.56 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.56000 REMARK 3 B22 (A**2) : 0.56000 REMARK 3 B33 (A**2) : -0.83000 REMARK 3 B12 (A**2) : 0.28000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.155 REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.074 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.262 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3906 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5314 ; 1.468 ; 1.961 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 478 ; 5.179 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 197 ;36.843 ;24.822 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 723 ;17.043 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;18.298 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 558 ; 0.098 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2950 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1873 ; 0.211 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2642 ; 0.307 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 268 ; 0.191 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 86 ; 0.226 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 26 ; 0.215 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2313 ; 0.972 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3622 ; 1.297 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1888 ; 2.502 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1664 ; 3.717 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 215 REMARK 3 ORIGIN FOR THE GROUP (A): 32.2450 53.5886 -18.4438 REMARK 3 T TENSOR REMARK 3 T11: -0.0551 T22: -0.0240 REMARK 3 T33: -0.0470 T12: 0.0031 REMARK 3 T13: 0.0056 T23: -0.0010 REMARK 3 L TENSOR REMARK 3 L11: 0.4085 L22: 0.8797 REMARK 3 L33: 1.0485 L12: 0.0945 REMARK 3 L13: -0.0712 L23: -0.5945 REMARK 3 S TENSOR REMARK 3 S11: -0.0372 S12: -0.0258 S13: -0.0258 REMARK 3 S21: -0.0882 S22: 0.0123 S23: -0.0284 REMARK 3 S31: 0.0717 S32: -0.0289 S33: 0.0249 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 3 B 217 REMARK 3 ORIGIN FOR THE GROUP (A): 59.8951 33.6841 2.0942 REMARK 3 T TENSOR REMARK 3 T11: -0.0337 T22: -0.0459 REMARK 3 T33: -0.0538 T12: 0.0149 REMARK 3 T13: 0.0338 T23: 0.0157 REMARK 3 L TENSOR REMARK 3 L11: 1.1782 L22: 0.6695 REMARK 3 L33: 0.5539 L12: -0.0695 REMARK 3 L13: 0.3838 L23: 0.1701 REMARK 3 S TENSOR REMARK 3 S11: 0.0395 S12: -0.0650 S13: 0.0954 REMARK 3 S21: -0.0058 S22: -0.0434 S23: 0.0300 REMARK 3 S31: 0.0343 S32: 0.0362 S33: 0.0039 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. ALL DATA WERE USED IN FINAL ROUND OF REFINEMENT. R- REMARK 3 FACTOR-ALL CORRESPONDS TO DEPOSITED FILE. R-WORK AND R-FREE REMARK 3 FACTORS ARE TAKEN FROM SECOND TO LAST ROUND OF REFINEMENT WHICH REMARK 3 USED TEST DATA SET. REMARK 4 REMARK 4 2B6C COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-OCT-05. REMARK 100 THE RCSB ID CODE IS RCSB034729. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-JUN-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36311 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.1 REMARK 200 DATA REDUNDANCY : 15.800 REMARK 200 R MERGE (I) : 0.15400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.16 REMARK 200 COMPLETENESS FOR SHELL (%) : 73.8 REMARK 200 DATA REDUNDANCY IN SHELL : 4.10 REMARK 200 R MERGE FOR SHELL (I) : 0.49900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.250 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD, MLPHARE, DM, SOLVE/RESOLVE, HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BIS-TRIS, 2 M AMMONIUM SULFATE REMARK 280 , PH 5.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 30.85800 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 15.42900 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 23.14350 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 7.71450 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 38.57250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 AUTHOR STATES THAT BIOLOGICAL UNIT REMARK 300 FOR THE PROTEIN IS NOT YET KNOWN REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 MSE A 1 REMARK 465 ASP A 2 REMARK 465 SER A 216 REMARK 465 GLU A 217 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 465 MSE B 1 REMARK 465 ASP B 2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N ALA A 213 O HOH A 545 1.92 REMARK 500 CB ALA A 213 O HOH A 545 1.98 REMARK 500 O HOH B 513 O HOH B 557 2.01 REMARK 500 O HOH A 556 O HOH A 569 2.03 REMARK 500 O3 SO4 A 404 O HOH A 551 2.08 REMARK 500 O HOH A 455 O HOH A 528 2.08 REMARK 500 O HOH A 485 O HOH A 570 2.10 REMARK 500 O HOH B 413 O HOH B 526 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 11 CB GLU A 11 CG 0.127 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 82 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 149 -121.25 43.99 REMARK 500 GLU A 169 112.27 -37.09 REMARK 500 LYS B 149 -117.85 52.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 569 DISTANCE = 6.61 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 412 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BME A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BME B 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 409 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 410 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 411 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC29610 RELATED DB: TARGETDB DBREF 2B6C A 1 217 UNP Q82ZI8 Q82ZI8_ENTFA 1 217 DBREF 2B6C B 1 217 UNP Q82ZI8 Q82ZI8_ENTFA 1 217 SEQADV 2B6C SER A -2 UNP Q82ZI8 CLONING ARTIFACT SEQADV 2B6C ASN A -1 UNP Q82ZI8 CLONING ARTIFACT SEQADV 2B6C ALA A 0 UNP Q82ZI8 CLONING ARTIFACT SEQADV 2B6C MSE A 1 UNP Q82ZI8 MET 1 MODIFIED RESIDUE SEQADV 2B6C MSE A 16 UNP Q82ZI8 MET 16 MODIFIED RESIDUE SEQADV 2B6C MSE A 20 UNP Q82ZI8 MET 20 MODIFIED RESIDUE SEQADV 2B6C MSE A 147 UNP Q82ZI8 MET 147 MODIFIED RESIDUE SEQADV 2B6C MSE A 195 UNP Q82ZI8 MET 195 MODIFIED RESIDUE SEQADV 2B6C SER B -2 UNP Q82ZI8 CLONING ARTIFACT SEQADV 2B6C ASN B -1 UNP Q82ZI8 CLONING ARTIFACT SEQADV 2B6C ALA B 0 UNP Q82ZI8 CLONING ARTIFACT SEQADV 2B6C MSE B 1 UNP Q82ZI8 MET 1 MODIFIED RESIDUE SEQADV 2B6C MSE B 16 UNP Q82ZI8 MET 16 MODIFIED RESIDUE SEQADV 2B6C MSE B 20 UNP Q82ZI8 MET 20 MODIFIED RESIDUE SEQADV 2B6C MSE B 147 UNP Q82ZI8 MET 147 MODIFIED RESIDUE SEQADV 2B6C MSE B 195 UNP Q82ZI8 MET 195 MODIFIED RESIDUE SEQRES 1 A 220 SER ASN ALA MSE ASP THR LEU GLN PHE GLN LYS ASN PRO SEQRES 2 A 220 GLU THR ALA ALA LYS MSE SER ALA TYR MSE LYS HIS GLN SEQRES 3 A 220 PHE VAL PHE ALA GLY ILE PRO ALA PRO GLU ARG GLN ALA SEQRES 4 A 220 LEU SER LYS GLN LEU LEU LYS GLU SER HIS THR TRP PRO SEQRES 5 A 220 LYS GLU LYS LEU CYS GLN GLU ILE GLU ALA TYR TYR GLN SEQRES 6 A 220 LYS THR GLU ARG GLU TYR GLN TYR VAL ALA ILE ASP LEU SEQRES 7 A 220 ALA LEU GLN ASN VAL GLN ARG PHE SER LEU GLU GLU VAL SEQRES 8 A 220 VAL ALA PHE LYS ALA TYR VAL PRO GLN LYS ALA TRP TRP SEQRES 9 A 220 ASP SER VAL ASP ALA TRP ARG LYS PHE PHE GLY SER TRP SEQRES 10 A 220 VAL ALA LEU HIS LEU THR GLU LEU PRO THR ILE PHE ALA SEQRES 11 A 220 LEU PHE TYR GLY ALA GLU ASN PHE TRP ASN ARG ARG VAL SEQRES 12 A 220 ALA LEU ASN LEU GLN LEU MSE LEU LYS GLU LYS THR ASN SEQRES 13 A 220 GLN ASP LEU LEU LYS LYS ALA ILE ILE TYR ASP ARG THR SEQRES 14 A 220 THR GLU GLU PHE PHE ILE GLN LYS ALA ILE GLY TRP SER SEQRES 15 A 220 LEU ARG GLN TYR SER LYS THR ASN PRO GLN TRP VAL GLU SEQRES 16 A 220 GLU LEU MSE LYS GLU LEU VAL LEU SER PRO LEU ALA GLN SEQRES 17 A 220 ARG GLU GLY SER LYS TYR LEU ALA LYS ALA SER GLU SEQRES 1 B 220 SER ASN ALA MSE ASP THR LEU GLN PHE GLN LYS ASN PRO SEQRES 2 B 220 GLU THR ALA ALA LYS MSE SER ALA TYR MSE LYS HIS GLN SEQRES 3 B 220 PHE VAL PHE ALA GLY ILE PRO ALA PRO GLU ARG GLN ALA SEQRES 4 B 220 LEU SER LYS GLN LEU LEU LYS GLU SER HIS THR TRP PRO SEQRES 5 B 220 LYS GLU LYS LEU CYS GLN GLU ILE GLU ALA TYR TYR GLN SEQRES 6 B 220 LYS THR GLU ARG GLU TYR GLN TYR VAL ALA ILE ASP LEU SEQRES 7 B 220 ALA LEU GLN ASN VAL GLN ARG PHE SER LEU GLU GLU VAL SEQRES 8 B 220 VAL ALA PHE LYS ALA TYR VAL PRO GLN LYS ALA TRP TRP SEQRES 9 B 220 ASP SER VAL ASP ALA TRP ARG LYS PHE PHE GLY SER TRP SEQRES 10 B 220 VAL ALA LEU HIS LEU THR GLU LEU PRO THR ILE PHE ALA SEQRES 11 B 220 LEU PHE TYR GLY ALA GLU ASN PHE TRP ASN ARG ARG VAL SEQRES 12 B 220 ALA LEU ASN LEU GLN LEU MSE LEU LYS GLU LYS THR ASN SEQRES 13 B 220 GLN ASP LEU LEU LYS LYS ALA ILE ILE TYR ASP ARG THR SEQRES 14 B 220 THR GLU GLU PHE PHE ILE GLN LYS ALA ILE GLY TRP SER SEQRES 15 B 220 LEU ARG GLN TYR SER LYS THR ASN PRO GLN TRP VAL GLU SEQRES 16 B 220 GLU LEU MSE LYS GLU LEU VAL LEU SER PRO LEU ALA GLN SEQRES 17 B 220 ARG GLU GLY SER LYS TYR LEU ALA LYS ALA SER GLU MODRES 2B6C MSE A 16 MET SELENOMETHIONINE MODRES 2B6C MSE A 20 MET SELENOMETHIONINE MODRES 2B6C MSE A 147 MET SELENOMETHIONINE MODRES 2B6C MSE A 195 MET SELENOMETHIONINE MODRES 2B6C MSE B 16 MET SELENOMETHIONINE MODRES 2B6C MSE B 20 MET SELENOMETHIONINE MODRES 2B6C MSE B 147 MET SELENOMETHIONINE MODRES 2B6C MSE B 195 MET SELENOMETHIONINE HET MSE A 16 8 HET MSE A 20 8 HET MSE A 147 8 HET MSE A 195 8 HET MSE B 16 8 HET MSE B 20 8 HET MSE B 147 8 HET MSE B 195 8 HET SO4 A 401 5 HET SO4 B 402 5 HET SO4 B 403 5 HET SO4 A 404 5 HET SO4 A 405 10 HET CL A 412 1 HET BME A 406 4 HET BME B 407 8 HET GOL B 408 6 HET GOL B 409 6 HET GOL B 410 6 HET GOL A 411 6 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION HETNAM CL CHLORIDE ION HETNAM BME BETA-MERCAPTOETHANOL HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 3 SO4 5(O4 S 2-) FORMUL 8 CL CL 1- FORMUL 9 BME 2(C2 H6 O S) FORMUL 11 GOL 4(C3 H8 O3) FORMUL 15 HOH *305(H2 O) HELIX 1 1 ASN A 9 MSE A 20 1 12 HELIX 2 2 PRO A 30 SER A 38 1 9 HELIX 3 3 SER A 38 HIS A 46 1 9 HELIX 4 4 PRO A 49 GLN A 62 1 14 HELIX 5 5 GLU A 65 ASN A 79 1 15 HELIX 6 6 VAL A 80 PHE A 83 5 4 HELIX 7 7 SER A 84 PHE A 91 1 8 HELIX 8 8 LYS A 92 VAL A 95 5 4 HELIX 9 9 TRP A 100 HIS A 118 1 19 HELIX 10 10 GLU A 121 TYR A 130 1 10 HELIX 11 11 ASN A 134 LEU A 144 1 11 HELIX 12 12 LEU A 148 THR A 152 5 5 HELIX 13 13 ASN A 153 ASP A 164 1 12 HELIX 14 14 GLU A 169 SER A 184 1 16 HELIX 15 15 ASN A 187 LEU A 198 1 12 HELIX 16 16 SER A 201 SER A 209 1 9 HELIX 17 17 ASN B 9 MSE B 20 1 12 HELIX 18 18 PRO B 30 HIS B 46 1 17 HELIX 19 19 PRO B 49 LYS B 63 1 15 HELIX 20 20 GLU B 65 ASN B 79 1 15 HELIX 21 21 VAL B 80 PHE B 83 5 4 HELIX 22 22 SER B 84 LYS B 92 1 9 HELIX 23 23 ALA B 93 VAL B 95 5 3 HELIX 24 24 TRP B 100 HIS B 118 1 19 HELIX 25 25 GLU B 121 TYR B 130 1 10 HELIX 26 26 ASN B 134 LEU B 144 1 11 HELIX 27 27 LEU B 148 THR B 152 5 5 HELIX 28 28 ASN B 153 ASP B 164 1 12 HELIX 29 29 GLU B 169 SER B 184 1 16 HELIX 30 30 ASN B 187 LEU B 198 1 12 HELIX 31 31 SER B 201 SER B 209 1 9 LINK C LYS A 15 N MSE A 16 1555 1555 1.33 LINK C MSE A 16 N SER A 17 1555 1555 1.35 LINK C TYR A 19 N MSE A 20 1555 1555 1.33 LINK C MSE A 20 N LYS A 21 1555 1555 1.33 LINK SG CYS A 54 S2 BME A 406 1555 1555 2.01 LINK C LEU A 146 N MSE A 147 1555 1555 1.32 LINK C MSE A 147 N LEU A 148 1555 1555 1.34 LINK C LEU A 194 N MSE A 195 1555 1555 1.33 LINK C MSE A 195 N LYS A 196 1555 1555 1.32 LINK C LYS B 15 N MSE B 16 1555 1555 1.34 LINK C MSE B 16 N SER B 17 1555 1555 1.33 LINK C TYR B 19 N MSE B 20 1555 1555 1.34 LINK C MSE B 20 N LYS B 21 1555 1555 1.34 LINK SG CYS B 54 S2 BBME B 407 1555 1555 2.04 LINK SG CYS B 54 S2 ABME B 407 1555 1555 2.04 LINK C LEU B 146 N MSE B 147 1555 1555 1.33 LINK C MSE B 147 N LEU B 148 1555 1555 1.33 LINK C LEU B 194 N MSE B 195 1555 1555 1.33 LINK C MSE B 195 N LYS B 196 1555 1555 1.33 SITE 1 AC1 5 LYS A 92 ALA A 132 GLU A 133 ASN A 134 SITE 2 AC1 5 ASN A 137 SITE 1 AC2 5 LYS B 92 ALA B 132 GLU B 133 ASN B 134 SITE 2 AC2 5 ASN B 137 SITE 1 AC3 6 ARG B 181 LYS B 185 TYR B 211 LYS B 214 SITE 2 AC3 6 SER B 216 HOH B 542 SITE 1 AC4 7 PRO A 49 LYS A 50 HOH A 435 HOH A 508 SITE 2 AC4 7 HOH A 551 PRO B 49 LYS B 50 SITE 1 AC5 4 GLN A 62 LYS A 63 THR A 64 GLU A 65 SITE 1 AC6 2 ARG A 34 ALA A 215 SITE 1 AC7 3 CYS A 54 GLU A 87 PHE A 91 SITE 1 AC8 5 CYS B 54 GLU B 87 ALA B 90 PHE B 91 SITE 2 AC8 5 HOH B 458 SITE 1 AC9 6 GLU A 169 PHE A 171 LYS B 8 THR B 64 SITE 2 AC9 6 GLU B 65 HOH B 527 SITE 1 BC1 5 LYS A 21 SER B 17 HIS B 22 HOH B 465 SITE 2 BC1 5 HOH B 511 SITE 1 BC2 8 HIS A 46 ARG A 82 HIS B 46 GLN B 78 SITE 2 BC2 8 ASN B 79 VAL B 80 GLN B 81 ARG B 82 SITE 1 BC3 4 MSE A 16 SER A 184 PRO A 188 TYR A 211 CRYST1 155.714 155.714 46.287 90.00 90.00 120.00 P 65 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006422 0.003708 0.000000 0.00000 SCALE2 0.000000 0.007416 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021604 0.00000