data_2B8R # _entry.id 2B8R # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.376 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2B8R pdb_00002b8r 10.2210/pdb2b8r/pdb NDB UR0071 ? ? RCSB RCSB034816 ? ? WWPDB D_1000034816 ? ? # _pdbx_database_PDB_obs_spr.id SPRSDE _pdbx_database_PDB_obs_spr.date 2005-10-25 _pdbx_database_PDB_obs_spr.pdb_id 2B8R _pdbx_database_PDB_obs_spr.replace_pdb_id 1JJM _pdbx_database_PDB_obs_spr.details ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1XPE 'HIV-1 subtype-B DIS RNA loop-loop complex' unspecified PDB 1XPF 'HIV-1 subtype-A DIS RNA loop-loop complex' unspecified PDB 1XP7 'HIV-1 subtype-F DIS RNA loop-loop complex' unspecified PDB 1Y3S 'HIV-1 subtype-F DIS RNA loop-loop complex' unspecified PDB 1ZCI 'HIV-1 subtype-F DIS RNA loop-loop complex' unspecified PDB 2B8S . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2B8R _pdbx_database_status.recvd_initial_deposition_date 2005-10-10 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ennifar, E.' 1 'Walter, P.' 2 'Ehresmann, B.' 3 'Ehresmann, C.' 4 'Dumas, P.' 5 # _citation.id primary _citation.title 'Crystal structures of coaxially stacked kissing complexes of the HIV-1 RNA dimerization initiation site' _citation.journal_abbrev Nat.Struct.Biol. _citation.journal_volume 8 _citation.page_first 1064 _citation.page_last 1068 _citation.year 2001 _citation.journal_id_ASTM NSBIEW _citation.country US _citation.journal_id_ISSN 1072-8368 _citation.journal_id_CSD 2024 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 11702070 _citation.pdbx_database_id_DOI 10.1038/nsb727 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ennifar, E.' 1 ? primary 'Walter, P.' 2 ? primary 'Ehresmann, B.' 3 ? primary 'Ehresmann, C.' 4 ? primary 'Dumas, P.' 5 ? # _cell.entry_id 2B8R _cell.length_a 27.564 _cell.length_b 115.404 _cell.length_c 98.426 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2B8R _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*AP*GP*CP*GP*CP*GP*CP*AP*CP*GP*GP*CP*AP*AP*G)-3'" 7417.488 2 ? ? ? 'HIV-1 DNS RNA' 2 non-polymer syn 'MAGNESIUM ION' 24.305 6 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 5 ? ? ? ? 4 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 5 water nat water 18.015 95 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code CUUGCUGAAGCGCGCACGGCAAG _entity_poly.pdbx_seq_one_letter_code_can CUUGCUGAAGCGCGCACGGCAAG _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 C n 1 2 U n 1 3 U n 1 4 G n 1 5 C n 1 6 U n 1 7 G n 1 8 A n 1 9 A n 1 10 G n 1 11 C n 1 12 G n 1 13 C n 1 14 G n 1 15 C n 1 16 A n 1 17 C n 1 18 G n 1 19 G n 1 20 C n 1 21 A n 1 22 A n 1 23 G n # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 2B8R _struct_ref.pdbx_db_accession 2B8R _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2B8R A 1 ? 23 ? 2B8R 1 ? 23 ? 1 23 2 1 2B8R B 1 ? 23 ? 2B8R 1 ? 23 ? 1 23 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 HOH non-polymer . WATER ? 'H2 O' 18.015 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # _exptl.entry_id 2B8R _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.53 _exptl_crystal.density_percent_sol 52 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 310 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details 'PEG8000, AMMONIUM SULFATE, SPERMINE, MAGNESIUM CHLORIDE, SODIUM CACODYLATE, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 310K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 PEG8000 ? ? ? 1 2 1 'AMMONIUM SULFATE' ? ? ? 1 3 1 SPERMINE ? ? ? 1 4 1 'MAGNESIUM CHLORIDE' ? ? ? 1 5 1 'SODIUM CACODYLATE' ? ? ? 1 6 1 H2O ? ? ? 1 7 2 PEG8000 ? ? ? 1 8 2 'AMMONIUM SULFATE' ? ? ? 1 9 2 'MAGNESIUM CHLORIDE' ? ? ? 1 10 2 'SODIUM CACODYLATE' ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2001-04-20 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator crystal _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.04 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE BM30A' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline BM30A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.04 # _reflns.entry_id 2B8R _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 2.0 _reflns.d_resolution_low 15 _reflns.d_resolution_high 2.60 _reflns.number_obs 4632 _reflns.number_all ? _reflns.percent_possible_obs 94.9 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.053 _reflns.pdbx_netI_over_sigmaI 29.0000 _reflns.B_iso_Wilson_estimate 56.1 _reflns.pdbx_redundancy 7.3 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.60 _reflns_shell.d_res_low 2.69 _reflns_shell.percent_possible_all 90.7 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.228 _reflns_shell.meanI_over_sigI_obs 4.0 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2B8R _refine.ls_number_reflns_obs 3994 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF 666030.43 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 8.00 _refine.ls_d_res_high 2.60 _refine.ls_percent_reflns_obs 83.7 _refine.ls_R_factor_obs 0.206 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.206 _refine.ls_R_factor_R_free 0.233 _refine.ls_R_factor_R_free_error 0.015 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 6.2 _refine.ls_number_reflns_R_free 246 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 36.3 _refine.aniso_B[1][1] -2.77 _refine.aniso_B[2][2] -10.05 _refine.aniso_B[3][3] 12.82 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.32475 _refine.solvent_model_param_bsol 44.1708 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'pdb entry 462D' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2B8R _refine_analyze.Luzzati_coordinate_error_obs 0.34 _refine_analyze.Luzzati_sigma_a_obs 0.31 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.37 _refine_analyze.Luzzati_sigma_a_free 0.28 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 982 _refine_hist.pdbx_number_atoms_ligand 32 _refine_hist.number_atoms_solvent 95 _refine_hist.number_atoms_total 1109 _refine_hist.d_res_high 2.60 _refine_hist.d_res_low 8.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.008 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.0 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 7.5 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.43 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.60 _refine_ls_shell.d_res_low 2.76 _refine_ls_shell.number_reflns_R_work 355 _refine_ls_shell.R_factor_R_work 0.355 _refine_ls_shell.percent_reflns_obs 45.1 _refine_ls_shell.R_factor_R_free 0.255 _refine_ls_shell.R_factor_R_free_error 0.056 _refine_ls_shell.percent_reflns_R_free 5.6 _refine_ls_shell.number_reflns_R_free 21 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 water_rep.param water.top 'X-RAY DIFFRACTION' 2 luc.param dna-rna.top 'X-RAY DIFFRACTION' 3 ion.param ion.top 'X-RAY DIFFRACTION' 4 bru_rep.param bru.top 'X-RAY DIFFRACTION' 5 neamine.param neamine.top 'X-RAY DIFFRACTION' # _struct.entry_id 2B8R _struct.title 'Structure oF HIV-1(LAI) genomic RNA DIS' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2B8R _struct_keywords.pdbx_keywords RNA _struct_keywords.text 'HIV-1, RNA, hairpin' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 2 ? H N N 3 ? I N N 2 ? J N N 4 ? K N N 3 ? L N N 3 ? M N N 2 ? N N N 2 ? O N N 5 ? P N N 5 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? C MG . MG ? ? ? 1_555 O HOH . O ? ? A MG 101 A HOH 251 1_555 ? ? ? ? ? ? ? 2.177 ? ? metalc2 metalc ? ? I MG . MG ? ? ? 1_555 P HOH . O ? ? B MG 105 B HOH 257 1_555 ? ? ? ? ? ? ? 2.996 ? ? metalc3 metalc ? ? M MG . MG ? ? ? 1_555 P HOH . O ? ? B MG 110 B HOH 278 1_555 ? ? ? ? ? ? ? 2.861 ? ? hydrog1 hydrog ? ? A C 1 N3 ? ? ? 1_555 A G 23 N1 ? ? A C 1 A G 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A C 1 N4 ? ? ? 1_555 A G 23 O6 ? ? A C 1 A G 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A C 1 O2 ? ? ? 1_555 A G 23 N2 ? ? A C 1 A G 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A U 2 N3 ? ? ? 1_555 A A 22 N1 ? ? A U 2 A A 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A U 2 O4 ? ? ? 1_555 A A 22 N6 ? ? A U 2 A A 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A U 3 N3 ? ? ? 1_555 A A 21 N1 ? ? A U 3 A A 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A U 3 O4 ? ? ? 1_555 A A 21 N6 ? ? A U 3 A A 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A G 4 N1 ? ? ? 1_555 A C 20 N3 ? ? A G 4 A C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A G 4 N2 ? ? ? 1_555 A C 20 O2 ? ? A G 4 A C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A G 4 O6 ? ? ? 1_555 A C 20 N4 ? ? A G 4 A C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A C 5 N3 ? ? ? 1_555 A G 19 N1 ? ? A C 5 A G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A C 5 N4 ? ? ? 1_555 A G 19 O6 ? ? A C 5 A G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A C 5 O2 ? ? ? 1_555 A G 19 N2 ? ? A C 5 A G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A U 6 N3 ? ? ? 1_555 A G 18 O6 ? ? A U 6 A G 18 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog15 hydrog ? ? A U 6 O2 ? ? ? 1_555 A G 18 N1 ? ? A U 6 A G 18 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog16 hydrog ? ? A G 7 N1 ? ? ? 1_555 A C 17 N3 ? ? A G 7 A C 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A G 7 N2 ? ? ? 1_555 A C 17 O2 ? ? A G 7 A C 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A G 7 O6 ? ? ? 1_555 A C 17 N4 ? ? A G 7 A C 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A G 10 N1 ? ? ? 1_555 B C 15 N3 ? ? A G 10 B C 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A G 10 N2 ? ? ? 1_555 B C 15 O2 ? ? A G 10 B C 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A G 10 O6 ? ? ? 1_555 B C 15 N4 ? ? A G 10 B C 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A C 11 N3 ? ? ? 1_555 B G 14 N1 ? ? A C 11 B G 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A C 11 N4 ? ? ? 1_555 B G 14 O6 ? ? A C 11 B G 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A C 11 O2 ? ? ? 1_555 B G 14 N2 ? ? A C 11 B G 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A G 12 N1 ? ? ? 1_555 B C 13 N3 ? ? A G 12 B C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A G 12 N2 ? ? ? 1_555 B C 13 O2 ? ? A G 12 B C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A G 12 O6 ? ? ? 1_555 B C 13 N4 ? ? A G 12 B C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A C 13 N3 ? ? ? 1_555 B G 12 N1 ? ? A C 13 B G 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A C 13 N4 ? ? ? 1_555 B G 12 O6 ? ? A C 13 B G 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A C 13 O2 ? ? ? 1_555 B G 12 N2 ? ? A C 13 B G 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A G 14 N1 ? ? ? 1_555 B C 11 N3 ? ? A G 14 B C 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A G 14 N2 ? ? ? 1_555 B C 11 O2 ? ? A G 14 B C 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A G 14 O6 ? ? ? 1_555 B C 11 N4 ? ? A G 14 B C 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A C 15 N3 ? ? ? 1_555 B G 10 N1 ? ? A C 15 B G 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A C 15 N4 ? ? ? 1_555 B G 10 O6 ? ? A C 15 B G 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A C 15 O2 ? ? ? 1_555 B G 10 N2 ? ? A C 15 B G 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? B C 1 N3 ? ? ? 1_555 B G 23 N1 ? ? B C 1 B G 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? B C 1 N4 ? ? ? 1_555 B G 23 O6 ? ? B C 1 B G 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? B C 1 O2 ? ? ? 1_555 B G 23 N2 ? ? B C 1 B G 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? B U 2 N3 ? ? ? 1_555 B A 22 N1 ? ? B U 2 B A 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? B U 2 O4 ? ? ? 1_555 B A 22 N6 ? ? B U 2 B A 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? B U 3 N3 ? ? ? 1_555 B A 21 N1 ? ? B U 3 B A 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? B U 3 O4 ? ? ? 1_555 B A 21 N6 ? ? B U 3 B A 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? B G 4 N1 ? ? ? 1_555 B C 20 N3 ? ? B G 4 B C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? B G 4 N2 ? ? ? 1_555 B C 20 O2 ? ? B G 4 B C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? B G 4 O6 ? ? ? 1_555 B C 20 N4 ? ? B G 4 B C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? B C 5 N3 ? ? ? 1_555 B G 19 N1 ? ? B C 5 B G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? B C 5 N4 ? ? ? 1_555 B G 19 O6 ? ? B C 5 B G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? B C 5 O2 ? ? ? 1_555 B G 19 N2 ? ? B C 5 B G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? B U 6 N3 ? ? ? 1_555 B G 18 O6 ? ? B U 6 B G 18 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog51 hydrog ? ? B U 6 O2 ? ? ? 1_555 B G 18 N1 ? ? B U 6 B G 18 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog52 hydrog ? ? B G 7 N1 ? ? ? 1_555 B C 17 N3 ? ? B G 7 B C 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? B G 7 N2 ? ? ? 1_555 B C 17 O2 ? ? B G 7 B C 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? B G 7 O6 ? ? ? 1_555 B C 17 N4 ? ? B G 7 B C 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 101 ? 1 'BINDING SITE FOR RESIDUE MG A 101' AC2 Software A SO4 103 ? 3 'BINDING SITE FOR RESIDUE SO4 A 103' AC3 Software B SO4 104 ? 5 'BINDING SITE FOR RESIDUE SO4 B 104' AC4 Software B MG 105 ? 1 'BINDING SITE FOR RESIDUE MG B 105' AC5 Software B NA 106 ? 2 'BINDING SITE FOR RESIDUE NA B 106' AC6 Software B SO4 107 ? 4 'BINDING SITE FOR RESIDUE SO4 B 107' AC7 Software A SO4 108 ? 2 'BINDING SITE FOR RESIDUE SO4 A 108' AC8 Software B SO4 109 ? 1 'BINDING SITE FOR RESIDUE SO4 B 109' AC9 Software B MG 110 ? 1 'BINDING SITE FOR RESIDUE MG B 110' BC1 Software A MG 111 ? 1 'BINDING SITE FOR RESIDUE MG A 111' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 1 HOH O . ? HOH A 251 . ? 1_555 ? 2 AC2 3 G A 10 ? G A 10 . ? 1_555 ? 3 AC2 3 C A 11 ? C A 11 . ? 1_555 ? 4 AC2 3 HOH O . ? HOH A 296 . ? 1_555 ? 5 AC3 5 A B 8 ? A B 8 . ? 1_555 ? 6 AC3 5 A B 9 ? A B 9 . ? 3_656 ? 7 AC3 5 A B 9 ? A B 9 . ? 1_555 ? 8 AC3 5 HOH P . ? HOH B 247 . ? 1_555 ? 9 AC3 5 HOH P . ? HOH B 298 . ? 1_555 ? 10 AC4 1 HOH P . ? HOH B 257 . ? 1_555 ? 11 AC5 2 C B 1 ? C B 1 . ? 1_555 ? 12 AC5 2 U B 2 ? U B 2 . ? 1_555 ? 13 AC6 4 C A 5 ? C A 5 . ? 1_455 ? 14 AC6 4 A A 16 ? A A 16 . ? 1_555 ? 15 AC6 4 G B 10 ? G B 10 . ? 1_555 ? 16 AC6 4 C B 11 ? C B 11 . ? 1_555 ? 17 AC7 2 C A 1 ? C A 1 . ? 1_555 ? 18 AC7 2 HOH O . ? HOH A 253 . ? 1_555 ? 19 AC8 1 C B 1 ? C B 1 . ? 1_555 ? 20 AC9 1 HOH P . ? HOH B 278 . ? 1_555 ? 21 BC1 1 G A 23 ? G A 23 . ? 1_555 ? # _database_PDB_matrix.entry_id 2B8R _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2B8R _atom_sites.fract_transf_matrix[1][1] 0.036279 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008665 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010160 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N NA O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 C 1 1 1 C C A . n A 1 2 U 2 2 2 U U A . n A 1 3 U 3 3 3 U U A . n A 1 4 G 4 4 4 G G A . n A 1 5 C 5 5 5 C C A . n A 1 6 U 6 6 6 U U A . n A 1 7 G 7 7 7 G G A . n A 1 8 A 8 8 8 A A A . n A 1 9 A 9 9 9 A A A . n A 1 10 G 10 10 10 G G A . n A 1 11 C 11 11 11 C C A . n A 1 12 G 12 12 12 G G A . n A 1 13 C 13 13 13 C C A . n A 1 14 G 14 14 14 G G A . n A 1 15 C 15 15 15 C C A . n A 1 16 A 16 16 16 A A A . n A 1 17 C 17 17 17 C C A . n A 1 18 G 18 18 18 G G A . n A 1 19 G 19 19 19 G G A . n A 1 20 C 20 20 20 C C A . n A 1 21 A 21 21 21 A A A . n A 1 22 A 22 22 22 A A A . n A 1 23 G 23 23 23 G G A . n B 1 1 C 1 1 1 C C B . n B 1 2 U 2 2 2 U U B . n B 1 3 U 3 3 3 U U B . n B 1 4 G 4 4 4 G G B . n B 1 5 C 5 5 5 C C B . n B 1 6 U 6 6 6 U U B . n B 1 7 G 7 7 7 G G B . n B 1 8 A 8 8 8 A A B . n B 1 9 A 9 9 9 A A B . n B 1 10 G 10 10 10 G G B . n B 1 11 C 11 11 11 C C B . n B 1 12 G 12 12 12 G G B . n B 1 13 C 13 13 13 C C B . n B 1 14 G 14 14 14 G G B . n B 1 15 C 15 15 15 C C B . n B 1 16 A 16 16 16 A A B . n B 1 17 C 17 17 17 C C B . n B 1 18 G 18 18 18 G G B . n B 1 19 G 19 19 19 G G B . n B 1 20 C 20 20 20 C C B . n B 1 21 A 21 21 21 A A B . n B 1 22 A 22 22 22 A A B . n B 1 23 G 23 23 23 G G B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG 1 101 101 MG MG A . D 2 MG 1 102 102 MG MG A . E 3 SO4 1 103 103 SO4 SO4 A . F 3 SO4 1 108 108 SO4 SO4 A . G 2 MG 1 111 111 MG MG A . H 3 SO4 1 104 104 SO4 SO4 B . I 2 MG 1 105 105 MG MG B . J 4 NA 1 106 106 NA NA B . K 3 SO4 1 107 107 SO4 SO4 B . L 3 SO4 1 109 109 SO4 SO4 B . M 2 MG 1 110 110 MG MG B . N 2 MG 1 112 112 MG MG B . O 5 HOH 1 201 201 HOH HOH A . O 5 HOH 2 205 205 HOH HOH A . O 5 HOH 3 207 207 HOH HOH A . O 5 HOH 4 209 209 HOH HOH A . O 5 HOH 5 210 210 HOH HOH A . O 5 HOH 6 211 211 HOH HOH A . O 5 HOH 7 215 215 HOH HOH A . O 5 HOH 8 216 216 HOH HOH A . O 5 HOH 9 218 218 HOH HOH A . O 5 HOH 10 219 219 HOH HOH A . O 5 HOH 11 221 221 HOH HOH A . O 5 HOH 12 226 226 HOH HOH A . O 5 HOH 13 227 227 HOH HOH A . O 5 HOH 14 233 233 HOH HOH A . O 5 HOH 15 234 234 HOH HOH A . O 5 HOH 16 236 236 HOH HOH A . O 5 HOH 17 237 237 HOH HOH A . O 5 HOH 18 238 238 HOH HOH A . O 5 HOH 19 242 242 HOH HOH A . O 5 HOH 20 243 243 HOH HOH A . O 5 HOH 21 251 251 HOH HOH A . O 5 HOH 22 252 252 HOH HOH A . O 5 HOH 23 253 253 HOH HOH A . O 5 HOH 24 255 255 HOH HOH A . O 5 HOH 25 256 256 HOH HOH A . O 5 HOH 26 260 260 HOH HOH A . O 5 HOH 27 261 261 HOH HOH A . O 5 HOH 28 263 263 HOH HOH A . O 5 HOH 29 264 264 HOH HOH A . O 5 HOH 30 265 265 HOH HOH A . O 5 HOH 31 266 266 HOH HOH A . O 5 HOH 32 268 268 HOH HOH A . O 5 HOH 33 271 271 HOH HOH A . O 5 HOH 34 272 272 HOH HOH A . O 5 HOH 35 275 275 HOH HOH A . O 5 HOH 36 279 279 HOH HOH A . O 5 HOH 37 280 280 HOH HOH A . O 5 HOH 38 285 285 HOH HOH A . O 5 HOH 39 286 286 HOH HOH A . O 5 HOH 40 287 287 HOH HOH A . O 5 HOH 41 288 288 HOH HOH A . O 5 HOH 42 291 291 HOH HOH A . O 5 HOH 43 292 292 HOH HOH A . O 5 HOH 44 293 293 HOH HOH A . O 5 HOH 45 295 295 HOH HOH A . O 5 HOH 46 296 296 HOH HOH A . P 5 HOH 1 200 200 HOH HOH B . P 5 HOH 2 202 202 HOH HOH B . P 5 HOH 3 203 203 HOH HOH B . P 5 HOH 4 204 204 HOH HOH B . P 5 HOH 5 206 206 HOH HOH B . P 5 HOH 6 212 212 HOH HOH B . P 5 HOH 7 213 213 HOH HOH B . P 5 HOH 8 214 214 HOH HOH B . P 5 HOH 9 220 220 HOH HOH B . P 5 HOH 10 222 222 HOH HOH B . P 5 HOH 11 223 223 HOH HOH B . P 5 HOH 12 224 224 HOH HOH B . P 5 HOH 13 225 225 HOH HOH B . P 5 HOH 14 228 228 HOH HOH B . P 5 HOH 15 229 229 HOH HOH B . P 5 HOH 16 230 230 HOH HOH B . P 5 HOH 17 231 231 HOH HOH B . P 5 HOH 18 232 232 HOH HOH B . P 5 HOH 19 235 235 HOH HOH B . P 5 HOH 20 239 239 HOH HOH B . P 5 HOH 21 240 240 HOH HOH B . P 5 HOH 22 241 241 HOH HOH B . P 5 HOH 23 244 244 HOH HOH B . P 5 HOH 24 245 245 HOH HOH B . P 5 HOH 25 246 246 HOH HOH B . P 5 HOH 26 247 247 HOH HOH B . P 5 HOH 27 248 248 HOH HOH B . P 5 HOH 28 249 249 HOH HOH B . P 5 HOH 29 250 250 HOH HOH B . P 5 HOH 30 254 254 HOH HOH B . P 5 HOH 31 257 257 HOH HOH B . P 5 HOH 32 258 258 HOH HOH B . P 5 HOH 33 262 262 HOH HOH B . P 5 HOH 34 267 267 HOH HOH B . P 5 HOH 35 269 269 HOH HOH B . P 5 HOH 36 270 270 HOH HOH B . P 5 HOH 37 274 274 HOH HOH B . P 5 HOH 38 276 276 HOH HOH B . P 5 HOH 39 277 277 HOH HOH B . P 5 HOH 40 278 278 HOH HOH B . P 5 HOH 41 281 281 HOH HOH B . P 5 HOH 42 282 282 HOH HOH B . P 5 HOH 43 283 283 HOH HOH B . P 5 HOH 44 284 284 HOH HOH B . P 5 HOH 45 289 289 HOH HOH B . P 5 HOH 46 290 290 HOH HOH B . P 5 HOH 47 294 294 HOH HOH B . P 5 HOH 48 297 297 HOH HOH B . P 5 HOH 49 298 298 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id B _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 203 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id P _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-10-25 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-08-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.1 ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 AMoRE phasing . ? 4 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 G OP3 O N N 73 G P P N N 74 G OP1 O N N 75 G OP2 O N N 76 G "O5'" O N N 77 G "C5'" C N N 78 G "C4'" C N R 79 G "O4'" O N N 80 G "C3'" C N S 81 G "O3'" O N N 82 G "C2'" C N R 83 G "O2'" O N N 84 G "C1'" C N R 85 G N9 N Y N 86 G C8 C Y N 87 G N7 N Y N 88 G C5 C Y N 89 G C6 C N N 90 G O6 O N N 91 G N1 N N N 92 G C2 C N N 93 G N2 N N N 94 G N3 N N N 95 G C4 C Y N 96 G HOP3 H N N 97 G HOP2 H N N 98 G "H5'" H N N 99 G "H5''" H N N 100 G "H4'" H N N 101 G "H3'" H N N 102 G "HO3'" H N N 103 G "H2'" H N N 104 G "HO2'" H N N 105 G "H1'" H N N 106 G H8 H N N 107 G H1 H N N 108 G H21 H N N 109 G H22 H N N 110 HOH O O N N 111 HOH H1 H N N 112 HOH H2 H N N 113 MG MG MG N N 114 NA NA NA N N 115 SO4 S S N N 116 SO4 O1 O N N 117 SO4 O2 O N N 118 SO4 O3 O N N 119 SO4 O4 O N N 120 U OP3 O N N 121 U P P N N 122 U OP1 O N N 123 U OP2 O N N 124 U "O5'" O N N 125 U "C5'" C N N 126 U "C4'" C N R 127 U "O4'" O N N 128 U "C3'" C N S 129 U "O3'" O N N 130 U "C2'" C N R 131 U "O2'" O N N 132 U "C1'" C N R 133 U N1 N N N 134 U C2 C N N 135 U O2 O N N 136 U N3 N N N 137 U C4 C N N 138 U O4 O N N 139 U C5 C N N 140 U C6 C N N 141 U HOP3 H N N 142 U HOP2 H N N 143 U "H5'" H N N 144 U "H5''" H N N 145 U "H4'" H N N 146 U "H3'" H N N 147 U "HO3'" H N N 148 U "H2'" H N N 149 U "HO2'" H N N 150 U "H1'" H N N 151 U H3 H N N 152 U H5 H N N 153 U H6 H N N 154 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 G OP3 P sing N N 76 G OP3 HOP3 sing N N 77 G P OP1 doub N N 78 G P OP2 sing N N 79 G P "O5'" sing N N 80 G OP2 HOP2 sing N N 81 G "O5'" "C5'" sing N N 82 G "C5'" "C4'" sing N N 83 G "C5'" "H5'" sing N N 84 G "C5'" "H5''" sing N N 85 G "C4'" "O4'" sing N N 86 G "C4'" "C3'" sing N N 87 G "C4'" "H4'" sing N N 88 G "O4'" "C1'" sing N N 89 G "C3'" "O3'" sing N N 90 G "C3'" "C2'" sing N N 91 G "C3'" "H3'" sing N N 92 G "O3'" "HO3'" sing N N 93 G "C2'" "O2'" sing N N 94 G "C2'" "C1'" sing N N 95 G "C2'" "H2'" sing N N 96 G "O2'" "HO2'" sing N N 97 G "C1'" N9 sing N N 98 G "C1'" "H1'" sing N N 99 G N9 C8 sing Y N 100 G N9 C4 sing Y N 101 G C8 N7 doub Y N 102 G C8 H8 sing N N 103 G N7 C5 sing Y N 104 G C5 C6 sing N N 105 G C5 C4 doub Y N 106 G C6 O6 doub N N 107 G C6 N1 sing N N 108 G N1 C2 sing N N 109 G N1 H1 sing N N 110 G C2 N2 sing N N 111 G C2 N3 doub N N 112 G N2 H21 sing N N 113 G N2 H22 sing N N 114 G N3 C4 sing N N 115 HOH O H1 sing N N 116 HOH O H2 sing N N 117 SO4 S O1 doub N N 118 SO4 S O2 doub N N 119 SO4 S O3 sing N N 120 SO4 S O4 sing N N 121 U OP3 P sing N N 122 U OP3 HOP3 sing N N 123 U P OP1 doub N N 124 U P OP2 sing N N 125 U P "O5'" sing N N 126 U OP2 HOP2 sing N N 127 U "O5'" "C5'" sing N N 128 U "C5'" "C4'" sing N N 129 U "C5'" "H5'" sing N N 130 U "C5'" "H5''" sing N N 131 U "C4'" "O4'" sing N N 132 U "C4'" "C3'" sing N N 133 U "C4'" "H4'" sing N N 134 U "O4'" "C1'" sing N N 135 U "C3'" "O3'" sing N N 136 U "C3'" "C2'" sing N N 137 U "C3'" "H3'" sing N N 138 U "O3'" "HO3'" sing N N 139 U "C2'" "O2'" sing N N 140 U "C2'" "C1'" sing N N 141 U "C2'" "H2'" sing N N 142 U "O2'" "HO2'" sing N N 143 U "C1'" N1 sing N N 144 U "C1'" "H1'" sing N N 145 U N1 C2 sing N N 146 U N1 C6 sing N N 147 U C2 O2 doub N N 148 U C2 N3 sing N N 149 U N3 C4 sing N N 150 U N3 H3 sing N N 151 U C4 O4 doub N N 152 U C4 C5 sing N N 153 U C5 C6 doub N N 154 U C5 H5 sing N N 155 U C6 H6 sing N N 156 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2B8R 'double helix' 2B8R 'a-form double helix' 2B8R 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A C 1 1_555 A G 23 1_555 0.448 -0.201 0.266 7.152 -17.000 -3.819 1 A_C1:G23_A A 1 ? A 23 ? 19 1 1 A U 2 1_555 A A 22 1_555 0.154 -0.183 0.249 -2.545 -19.910 -2.840 2 A_U2:A22_A A 2 ? A 22 ? 20 1 1 A U 3 1_555 A A 21 1_555 0.343 -0.008 0.226 0.183 -16.476 -0.095 3 A_U3:A21_A A 3 ? A 21 ? 20 1 1 A G 4 1_555 A C 20 1_555 0.267 -0.153 0.150 4.155 -14.308 1.235 4 A_G4:C20_A A 4 ? A 20 ? 19 1 1 A C 5 1_555 A G 19 1_555 0.577 -0.120 0.277 0.746 -17.834 3.359 5 A_C5:G19_A A 5 ? A 19 ? 19 1 1 A U 6 1_555 A G 18 1_555 2.281 -0.457 0.382 -3.594 -24.394 7.633 6 A_U6:G18_A A 6 ? A 18 ? 28 1 1 A G 7 1_555 A C 17 1_555 -0.312 0.047 0.009 -2.462 -11.853 0.855 7 A_G7:C17_A A 7 ? A 17 ? 19 1 1 B C 1 1_555 B G 23 1_555 0.179 -0.279 0.422 5.595 -11.010 1.138 8 B_C1:G23_B B 1 ? B 23 ? 19 1 1 B U 2 1_555 B A 22 1_555 0.134 -0.201 -0.135 0.499 -13.394 4.787 9 B_U2:A22_B B 2 ? B 22 ? 20 1 1 B U 3 1_555 B A 21 1_555 0.185 -0.183 0.530 -1.287 -13.883 1.645 10 B_U3:A21_B B 3 ? B 21 ? 20 1 1 B G 4 1_555 B C 20 1_555 -0.300 -0.090 -0.335 -2.303 -17.509 1.150 11 B_G4:C20_B B 4 ? B 20 ? 19 1 1 B C 5 1_555 B G 19 1_555 0.553 -0.098 -0.001 6.902 -21.148 -1.600 12 B_C5:G19_B B 5 ? B 19 ? 19 1 1 B U 6 1_555 B G 18 1_555 2.663 -0.422 -0.167 -2.837 -23.642 3.185 13 B_U6:G18_B B 6 ? B 18 ? 28 ? 1 B G 7 1_555 B C 17 1_555 0.433 -0.150 -0.040 -4.131 -16.167 -2.041 14 B_G7:C17_B B 7 ? B 17 ? 19 1 1 A G 10 1_555 B C 15 1_555 -0.435 -0.091 0.279 -1.754 -10.142 3.805 15 A_G10:C15_B A 10 ? B 15 ? 19 1 1 A C 11 1_555 B G 14 1_555 0.431 0.102 0.447 -6.134 -12.217 1.557 16 A_C11:G14_B A 11 ? B 14 ? 19 1 1 A G 12 1_555 B C 13 1_555 -0.075 -0.350 -0.018 -5.315 -11.622 -2.558 17 A_G12:C13_B A 12 ? B 13 ? 19 1 1 A C 13 1_555 B G 12 1_555 0.176 -0.090 -0.057 4.895 -10.194 -0.009 18 A_C13:G12_B A 13 ? B 12 ? 19 1 1 A G 14 1_555 B C 11 1_555 0.107 0.020 0.162 5.429 -11.715 -2.575 19 A_G14:C11_B A 14 ? B 11 ? 19 1 1 A C 15 1_555 B G 10 1_555 0.595 0.154 -0.178 14.981 -13.975 5.988 20 A_C15:G10_B A 15 ? B 10 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A C 1 1_555 A G 23 1_555 A U 2 1_555 A A 22 1_555 -0.589 -1.694 3.395 -3.231 9.173 34.201 -4.093 0.502 2.900 15.220 5.361 35.517 1 AA_C1U2:A22G23_AA A 1 ? A 23 ? A 2 ? A 22 ? 1 A U 2 1_555 A A 22 1_555 A U 3 1_555 A A 21 1_555 -0.154 -1.379 3.126 -1.517 6.401 35.358 -3.075 0.050 2.845 10.427 2.471 35.946 2 AA_U2U3:A21A22_AA A 2 ? A 22 ? A 3 ? A 21 ? 1 A U 3 1_555 A A 21 1_555 A G 4 1_555 A C 20 1_555 -0.557 -1.826 3.117 -1.564 8.354 24.793 -5.997 0.861 2.413 18.767 3.514 26.188 3 AA_U3G4:C20A21_AA A 3 ? A 21 ? A 4 ? A 20 ? 1 A G 4 1_555 A C 20 1_555 A C 5 1_555 A G 19 1_555 0.303 -1.352 3.329 -1.189 8.032 34.856 -3.326 -0.660 2.943 13.187 1.952 35.760 4 AA_G4C5:G19C20_AA A 4 ? A 20 ? A 5 ? A 19 ? 1 A C 5 1_555 A G 19 1_555 A U 6 1_555 A G 18 1_555 0.728 -1.558 3.420 3.459 0.103 36.400 -2.498 -0.657 3.468 0.165 -5.521 36.559 5 AA_C5U6:G18G19_AA A 5 ? A 19 ? A 6 ? A 18 ? 1 A U 6 1_555 A G 18 1_555 A G 7 1_555 A C 17 1_555 -0.683 -1.848 2.859 5.261 20.304 23.264 -5.954 1.923 0.843 41.194 -10.674 31.227 6 AA_U6G7:C17G18_AA A 6 ? A 18 ? A 7 ? A 17 ? 1 B C 1 1_555 B G 23 1_555 B U 2 1_555 B A 22 1_555 -0.435 -1.548 3.291 0.902 8.417 34.902 -3.660 0.830 2.842 13.783 -1.476 35.883 7 BB_C1U2:A22G23_BB B 1 ? B 23 ? B 2 ? B 22 ? 1 B U 2 1_555 B A 22 1_555 B U 3 1_555 B A 21 1_555 -0.378 -1.167 3.337 -6.472 4.459 32.846 -2.739 -0.408 3.171 7.748 11.245 33.748 8 BB_U2U3:A21A22_BB B 2 ? B 22 ? B 3 ? B 21 ? 1 B U 3 1_555 B A 21 1_555 B G 4 1_555 B C 20 1_555 -0.236 -1.656 3.173 3.679 13.322 25.666 -5.771 1.153 2.031 27.587 -7.617 29.096 9 BB_U3G4:C20A21_BB B 3 ? B 21 ? B 4 ? B 20 ? 1 B G 4 1_555 B C 20 1_555 B C 5 1_555 B G 19 1_555 -0.105 -1.278 3.065 -3.091 3.722 36.835 -2.464 -0.215 2.926 5.859 4.866 37.141 10 BB_G4C5:G19C20_BB B 4 ? B 20 ? B 5 ? B 19 ? 1 B C 5 1_555 B G 19 1_555 B U 6 1_555 B G 18 1_555 0.527 -1.527 3.569 5.998 6.354 40.004 -2.929 -0.051 3.340 9.156 -8.643 40.909 11 BB_C5U6:G18G19_BB B 5 ? B 19 ? B 6 ? B 18 ? 1 B U 6 1_555 B G 18 1_555 B G 7 1_555 B C 17 1_555 -0.552 -1.593 3.180 6.059 21.053 24.340 -5.712 1.810 1.273 40.895 -11.770 32.637 12 BB_U6G7:C17G18_BB B 6 ? B 18 ? B 7 ? B 17 ? 1 B G 7 1_555 B C 17 1_555 A G 10 1_555 B C 15 1_555 -1.948 -3.102 6.095 -5.123 15.094 78.010 -3.167 1.275 5.617 11.875 4.030 79.366 13 BA_G7G10:C15C17_BB B 7 ? B 17 ? A 10 ? B 15 ? 1 A G 10 1_555 B C 15 1_555 A C 11 1_555 B G 14 1_555 -0.167 -1.656 3.373 -1.149 4.018 36.481 -3.182 0.108 3.183 6.393 1.828 36.712 14 AA_G10C11:G14C15_BB A 10 ? B 15 ? A 11 ? B 14 ? 1 A C 11 1_555 B G 14 1_555 A G 12 1_555 B C 13 1_555 -0.941 -1.913 3.076 3.393 11.281 27.710 -5.571 2.380 2.032 22.319 -6.713 30.065 15 AA_C11G12:C13G14_BB A 11 ? B 14 ? A 12 ? B 13 ? 1 A G 12 1_555 B C 13 1_555 A C 13 1_555 B G 12 1_555 0.003 -0.820 3.118 -1.008 8.030 32.057 -2.698 -0.162 2.834 14.259 1.790 33.037 16 AA_G12C13:G12C13_BB A 12 ? B 13 ? A 13 ? B 12 ? 1 A C 13 1_555 B G 12 1_555 A G 14 1_555 B C 11 1_555 0.083 -1.971 3.198 -1.240 13.305 29.357 -5.582 -0.338 2.123 24.704 2.302 32.195 17 AA_C13G14:C11G12_BB A 13 ? B 12 ? A 14 ? B 11 ? 1 A G 14 1_555 B C 11 1_555 A C 15 1_555 B G 10 1_555 0.782 -1.225 3.091 2.831 3.593 33.791 -2.624 -0.913 3.003 6.146 -4.842 34.090 18 AA_G14C15:G10C11_BB A 14 ? B 11 ? A 15 ? B 10 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 'SULFATE ION' SO4 4 'SODIUM ION' NA 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 462D _pdbx_initial_refinement_model.details 'pdb entry 462D' #