HEADER TRANSFERASE 10-OCT-05 2B94 TITLE STRUCTURAL ANALYSIS OF P KNOWLESI HOMOLOG OF P FALCIPARUM PNP COMPND MOL_ID: 1; COMPND 2 MOLECULE: PURINE NUCLEOSIDE PHOSPHORYLASE; COMPND 3 CHAIN: A; COMPND 4 EC: 2.4.2.1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLASMODIUM KNOWLESI; SOURCE 3 ORGANISM_TAXID: 5850; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21STAR(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: T7; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET14B KEYWDS SGPP, STRUCTURAL GENOMICS, PSI, PROTEIN STRUCTURE INITIATIVE, PNP, KEYWDS 2 UDP, ONTARIO/TORONTO SGC, STRUCTURAL GENOMICS OF PATHOGENIC PROTOZOA KEYWDS 3 CONSORTIUM, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.A.ROBIEN,J.BOSCH,W.G.J.HOL,STRUCTURAL GENOMICS OF PATHOGENIC AUTHOR 2 PROTOZOA CONSORTIUM (SGPP) REVDAT 6 09-OCT-24 2B94 1 REMARK REVDAT 5 23-AUG-23 2B94 1 REMARK REVDAT 4 13-JUL-11 2B94 1 VERSN REVDAT 3 07-APR-09 2B94 1 HETNAM REVDAT 2 24-FEB-09 2B94 1 VERSN REVDAT 1 01-NOV-05 2B94 0 JRNL AUTH M.A.ROBIEN,J.BOSCH,W.G.J.HOL, JRNL AUTH 2 STRUCTURAL GENOMICS OF PATHOGENIC PROTOZOA CONSORTIUM (SGPP) JRNL TITL STRUCTURAL ANALYSIS OF P KNOWLESI HOMOLOG OF P FALCIPARUM JRNL TITL 2 PNP JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 14.99 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.9 REMARK 3 NUMBER OF REFLECTIONS : 23591 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1257 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.85 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2832 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 80.99 REMARK 3 BIN R VALUE (WORKING SET) : 0.2530 REMARK 3 BIN FREE R VALUE SET COUNT : 141 REMARK 3 BIN FREE R VALUE : 0.2840 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1807 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 133 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.19 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.46 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.125 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.123 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.085 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.806 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.937 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1845 ; 0.009 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1710 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2504 ; 1.152 ; 1.977 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3955 ; 0.751 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 239 ; 5.359 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 67 ;31.632 ;24.478 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 309 ;11.334 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;13.175 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 300 ; 0.063 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2029 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 342 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 354 ; 0.195 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1682 ; 0.171 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 925 ; 0.167 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1026 ; 0.080 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 120 ; 0.140 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 13 ; 0.194 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 48 ; 0.263 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 9 ; 0.165 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1277 ; 2.045 ; 4.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 492 ; 0.473 ; 4.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1935 ; 2.826 ; 6.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 696 ; 3.210 ; 6.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 569 ; 4.137 ; 8.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. A PATCH OF DENSITY WHICH COULD NOT BE CONFIDENTLY REMARK 3 ASSIGNED TO COMPONENTS OF THE CRYSTALLIZATION DROP OR KNOWN REMARK 3 SUBSTRATES REMAINS IN THE FINAL DIFFERENCE MAPS. THIS DENSITY IS REMARK 3 BOUND ROUGHLY BY RESIDUES 19, 20, 85, 86, 87, 88, 158 AND 180. REMARK 4 REMARK 4 2B94 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-OCT-05. REMARK 100 THE DEPOSITION ID IS D_1000034829. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-JUN-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9184 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24916 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 41.169 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.9 REMARK 200 DATA REDUNDANCY : 7.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.87000 REMARK 200 FOR THE DATA SET : 13.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 81.4 REMARK 200 DATA REDUNDANCY IN SHELL : 4.60 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.78100 REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRIES 1SQ6, 1NW4 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM THIOSULFATE, MOPS, PH 7.0, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 49.18850 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 28.39899 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 53.36000 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 49.18850 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 28.39899 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 53.36000 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 49.18850 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 28.39899 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 53.36000 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 49.18850 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 28.39899 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 53.36000 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 49.18850 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 28.39899 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 53.36000 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 49.18850 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 28.39899 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 53.36000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 56.79799 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 106.72000 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 56.79799 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 106.72000 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 56.79799 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 106.72000 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 56.79799 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 106.72000 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 56.79799 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 106.72000 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 56.79799 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 106.72000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 4 0.866025 0.500000 0.000000 -56.79799 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 53.36000 REMARK 350 BIOMT1 5 1.000000 0.000000 0.000000 -49.18850 REMARK 350 BIOMT2 5 0.000000 -1.000000 0.000000 28.39899 REMARK 350 BIOMT3 5 0.000000 0.000000 -1.000000 53.36000 REMARK 350 BIOMT1 6 -0.500000 -0.866025 0.000000 49.18850 REMARK 350 BIOMT2 6 -0.866025 0.500000 0.000000 28.39899 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 53.36000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 306 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -25 REMARK 465 GLY A -24 REMARK 465 SER A -23 REMARK 465 THR A -22 REMARK 465 HIS A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 SER A -15 REMARK 465 SER A -14 REMARK 465 GLY A -13 REMARK 465 ARG A -12 REMARK 465 GLU A -11 REMARK 465 TYR A 40 REMARK 465 ASN A 41 REMARK 465 ARG A 42 REMARK 465 ASP A 210 REMARK 465 GLU A 211 REMARK 465 GLY A 212 REMARK 465 ASP A 213 REMARK 465 PHE A 214 REMARK 465 ASP A 215 REMARK 465 ASN A 216 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 TYR A -8 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU A -2 CG CD OE1 OE2 REMARK 470 GLU A 0 CG CD OE1 OE2 REMARK 470 LYS A 6 CD CE NZ REMARK 470 LYS A 27 CD CE NZ REMARK 470 LYS A 98 CG CD CE NZ REMARK 470 ARG A 99 CD NE CZ NH1 NH2 REMARK 470 PHE A 129 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 137 CD CE NZ REMARK 470 GLN A 140 CD OE1 NE2 REMARK 470 GLU A 168 CD OE1 OE2 REMARK 470 LYS A 208 CG CD CE NZ REMARK 470 GLU A 221 CG CD OE1 OE2 REMARK 470 LYS A 222 CD CE NZ REMARK 470 GLU A 224 CG CD OE1 OE2 REMARK 470 LYS A 228 CG CD CE NZ REMARK 470 GLU A 232 CG CD OE1 OE2 REMARK 470 LYS A 240 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 38 75.89 -104.51 REMARK 500 ARG A 113 -63.94 75.04 REMARK 500 GLU A 179 -156.10 -135.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE THJ A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE THJ A 303 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: PKNO008421AAA RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE THE SEQUENCE OF THIS PROTEIN IS NOT AVAILABLE AT EITHER REMARK 999 SWS OR GB SEQUENCE DATABASE AT THE TIME OF PROCESSING. THIS REMARK 999 PROTEIN IS A HOMOLOG OF PLASMODIUM FALCIPARUM PFE0660C, GI: REMARK 999 23613155. THE SEQUENCE IS PRESENT IN TARGETDB AS PKNO008421AAA. REMARK 999 THE SEQUENCE CITED IS BASED ON P KNOWLESI GENOMIC NUCLEOTIDE REMARK 999 SEQUENCE (PLASMODBV4.4: ORF ID AS OF 10/12/2005: PK_6F05P1C). REMARK 999 THE N-TERMINUS RESIDUES -25-0 ARE CLONING ARTIFACTS. DBREF 2B94 A -25 241 PDB 2B94 2B94 -25 241 SEQRES 1 A 267 MET GLY SER THR HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 267 ARG GLU ASN LEU TYR PHE GLN GLY HIS MET GLU GLU GLU SEQRES 3 A 267 MET GLN ARG HIS ILE LYS LEU THR PRO SER GLN THR THR SEQRES 4 A 267 PRO VAL VAL LEU VAL VAL GLY ASP PRO GLY ARG VAL ASP SEQRES 5 A 267 LYS VAL LYS MET LEU CYS ASP SER TYR VAL ASP LEU ALA SEQRES 6 A 267 TYR ASN ARG GLU TYR LYS SER VAL GLU CYS THR TYR LYS SEQRES 7 A 267 GLY GLN LYS PHE LEU CYS VAL SER HIS GLY VAL GLY SER SEQRES 8 A 267 ALA GLY CYS ALA ILE CYS PHE GLU GLU LEU MET ASN ASN SEQRES 9 A 267 GLY ALA LYS VAL ILE ILE ARG ALA GLY SER CYS GLY SER SEQRES 10 A 267 LEU GLN PRO THR GLN MET LYS ARG GLY ASP ILE CYS ILE SEQRES 11 A 267 CYS ASN ALA ALA VAL ARG GLU ASP ARG VAL SER HIS LEU SEQRES 12 A 267 MET ILE TYR SER ASP PHE PRO ALA VAL ALA ASP PHE GLU SEQRES 13 A 267 VAL TYR ASP THR LEU ASN LYS VAL ALA GLN GLU LEU GLU SEQRES 14 A 267 VAL PRO VAL PHE ASN GLY ILE SER LEU SER SER ASP LEU SEQRES 15 A 267 TYR TYR PRO HIS LYS ILE ILE PRO THR ARG LEU GLU ASP SEQRES 16 A 267 TYR SER LYS ALA ASN VAL ALA VAL VAL GLU MET GLU VAL SEQRES 17 A 267 ALA THR LEU MET VAL MET GLY THR LEU ARG LYS VAL LYS SEQRES 18 A 267 THR GLY GLY ILE PHE ILE VAL ASP GLY CYS PRO LEU LYS SEQRES 19 A 267 TRP ASP GLU GLY ASP PHE ASP ASN ASN LEU VAL PRO GLU SEQRES 20 A 267 LYS LEU GLU ASN MET ILE LYS ILE SER LEU GLU THR CYS SEQRES 21 A 267 ALA ARG LEU ALA LYS LYS TYR HET THJ A 301 5 HET THJ A 303 5 HETNAM THJ THIOSULFATE FORMUL 2 THJ 2(O3 S2 2-) FORMUL 4 HOH *133(H2 O) HELIX 1 1 THR A 8 THR A 12 5 5 HELIX 2 2 ASP A 21 LEU A 31 1 11 HELIX 3 3 CYS A 68 ASN A 78 1 11 HELIX 4 4 VAL A 114 ILE A 119 1 6 HELIX 5 5 ASP A 128 LEU A 142 1 15 HELIX 6 6 LEU A 156 LYS A 161 1 6 HELIX 7 7 ARG A 166 ALA A 173 1 8 HELIX 8 8 GLU A 181 LYS A 193 1 13 HELIX 9 9 CYS A 205 TRP A 209 5 5 HELIX 10 10 VAL A 219 LYS A 240 1 22 SHEET 1 A 9 SER A 34 ASP A 37 0 SHEET 2 A 9 TYR A 44 TYR A 51 -1 O GLU A 48 N VAL A 36 SHEET 3 A 9 GLN A 54 HIS A 61 -1 O PHE A 56 N CYS A 49 SHEET 4 A 9 VAL A 15 VAL A 18 1 N LEU A 17 O LEU A 57 SHEET 5 A 9 VAL A 82 SER A 91 1 O ILE A 84 N VAL A 18 SHEET 6 A 9 VAL A 177 GLU A 179 -1 O VAL A 178 N GLY A 90 SHEET 7 A 9 PHE A 147 SER A 154 1 N LEU A 152 O GLU A 179 SHEET 8 A 9 ILE A 102 GLU A 111 1 N VAL A 109 O SER A 151 SHEET 9 A 9 ALA A 125 VAL A 126 -1 O ALA A 125 N ALA A 108 SHEET 1 B 8 SER A 34 ASP A 37 0 SHEET 2 B 8 TYR A 44 TYR A 51 -1 O GLU A 48 N VAL A 36 SHEET 3 B 8 GLN A 54 HIS A 61 -1 O PHE A 56 N CYS A 49 SHEET 4 B 8 VAL A 15 VAL A 18 1 N LEU A 17 O LEU A 57 SHEET 5 B 8 VAL A 82 SER A 91 1 O ILE A 84 N VAL A 18 SHEET 6 B 8 LYS A 195 GLY A 204 1 O ASP A 203 N CYS A 89 SHEET 7 B 8 ILE A 102 GLU A 111 -1 N CYS A 103 O PHE A 200 SHEET 8 B 8 ALA A 125 VAL A 126 -1 O ALA A 125 N ALA A 108 SSBOND 1 CYS A 68 CYS A 71 1555 1555 2.08 SITE 1 AC1 6 TYR A 120 SER A 121 ASP A 122 ARG A 166 SITE 2 AC1 6 HOH A 364 HOH A 381 SITE 1 AC2 4 GLY A 23 ARG A 24 LEU A 223 HOH A 425 CRYST1 98.377 98.377 160.080 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010165 0.005869 0.000000 0.00000 SCALE2 0.000000 0.011738 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006247 0.00000